BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477922
Length=2668
Score E
Sequences producing significant alignments: (Bits) Value
AT3G06210.1 | Symbols: | ARM repeat superfamily protein | chr3... 3048 0.0
AT5G18980.1 | Symbols: | ARM repeat superfamily protein | chr5... 1823 0.0
> AT3G06210.1 | Symbols: | ARM repeat superfamily protein | chr3:1880093-1883491
FORWARD LENGTH=2697
Length=2697
Score = 3048 bits (1650), Expect = 0.0
Identities = 1813/1892 (96%), Gaps = 9/1892 (0%)
Strand=Plus/Plus
Query 1 ATGTATTCCGAGAATTTTGGAGAGGATGATCGGAGCATCCATTTGCAGGTGTTGGAGCTC 60
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTATTCCGAGAATATTGGAGAAGATGATCGGAGCATCCATTTGCAGGTGTTGGAGCTC 60
Query 61 CAAAAATTGGAAGAAGCACGAGGCTCAAGCGACACCGTTTTGGATTATAGAAACAGCGTC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CAAAAATTGGAAGAAGCACGAGGCTCAAGCGACACCGTTTTGGATTATAGAAACAGCGTC 120
Query 121 --G-AAGGAGACAGCGGCGAAACCGCAGACGCAGTGTCTAAT-TCCTCCGCGATCGCGTT 176
| |||||||||||||||||||||||||||||| |||| | || ||||||||||||||
Sbjct 121 GAGAAAGGAGACAGCGGCGAAACCGCAGACGCAGCGTCT-GTATCTTCCGCGATCGCGTT 179
Query 177 TCACAGACCAACATCACCCGCGCCGGAGCAGAAGCTCACACTCTTCGCTCTCCGCCTCGC 236
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 180 TCACAGATCAACATCACCCGCGCCGGAGCAGAAACTCACACTCTTCGCTCTCCGCCTTGC 239
Query 237 AATCATAGAGAAAATCGCCACTAATCTCGGAACCCTAGGTTTCATTTGGGCCACGGTGGT 296
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 AATCATCGAGAAAATCGCCACTAATCTCGGAACCCTAGGTTTCATTTGGGCCACGGTGGT 299
Query 297 TCTTCTCGGCGGATTCGCGATCACACTCGAAAAATCCGACTTCTGGTTCATCACCATCAT 356
||||||||| |||||||| ||||| |||||||||||||| || |||||||||||||||||
Sbjct 300 TCTTCTCGGTGGATTCGCTATCACGCTCGAAAAATCCGATTTTTGGTTCATCACCATCAT 359
Query 357 TCTCCTCATCGAAGGCACTCGAATCTTCAGCAGAAGCCACGAGCTCGAGTGGCAGCACCA 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TCTCCTCATCGAAGGCACTCGAATCTTCAGCAGAAGCCACGAGCTCGAGTGGCAGCACCA 419
Query 417 TGCCACGTGGACTGTATCCGGCGTCGGAATTAGTAGCTTCCGCGTGATCCAATCAAGCTC 476
||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 420 GGCCACGTGGACTGTATCCGGCGTCGGAATCAGTAGCTTCCGCGTGCTCCAATCAAGCTC 479
Query 477 AATTTCACTTCTCAGAAATCTT-AAACGAATCAGCGAAGGGATCTTTAAGCCGATCCTCG 535
||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||
Sbjct 480 AATTTCACTTCTCAGAAAT-TTAAAACGAATCAGCGATGGGATCTTTAAGCCGATCCTCG 538
Query 536 ATAATGGATTGAGAGAAGCGACGACGAGAATCGGACGACAAGAGACCTTTGATCGTCGAA 595
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 539 ACAATGGATTGAGAGAAGCGACGACGAGAATCGGACGACAAGAGATCTTTGATCGTCGAA 598
Query 596 CAACTCTGACATGGAAGAACTCAGAAGTTCCTCTTCTTCCATATGCGAGATGGCTTTACA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 CAACTCTGACATGGAAGAACTCAGAAGTTCCTCTTCTTCCATATGCGAGATGGCTTTACA 658
Query 656 TCTCCAGCTACGTGAGCCGGCTTCTTTACTGGCTCCAGCTTTTGTCAGCGAGTGCTTGTG 715
|||||||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 659 TCTCCAGCTATGTGAGTCGGATTCTCTACTGGCTCCAGCTTTTGTCAGCGAGTGCTTGTG 718
Query 716 TGGCTCTGTCTTCTTACAAGCTCGTAATGCACAACTACGGAGATGTTCAAGATGGAGACT 775
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 719 TGGCTCTGTCTTCCTACAAGCTCGTAATGCACAACTACGGAGATGTTCAAGACGGAGACT 778
Query 776 TGGACAAAAGGAACAGACAAGCCGCTCTCAGCATCTTCTACTCGCTTGCGCTTGCCGAGG 835
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 779 TGGACAAAAGGAATAGACAAGCCGCTCTCAGCATCTTCTACTCGCTTGCTCTTGCCGAAG 838
Query 836 CGTTGTTGTTTCTTGCGGAGAAAGCTTACTGGGAGTGGGAGGTCAGTGTCTGTAACTTGC 895
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 839 CGTTGTTGTTTCTTGCGGAGAAAGCTTACTGGGAGTGGGAGGTCAGTGTGTGTCACTTGC 898
Query 896 TTGAGAATGTGACTAGAGAGTGTGGGTTTGGGGTTAGTGGAATGGTCTCTATCAAGAGAT 955
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 899 TTGAGAATGTGACTAGAGAGTGTGGGTTTGGGGTTACTGGAATGGTCTCTATCAAGAGAT 958
Query 956 TCTTCTATGATGCTTACTCGAAGTCTGTCAATGGGAGTATCTTTGATGGTGTGAAGATGG 1015
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 959 TCTTCTATGATGCTTACTCCAAGTCTGTCAATGGGAGTATCTTTGATGGTGTGAAGATGG 1018
Query 1016 ATATGGTGAGCTTTGCTATGGATCTCTTGGGCTCAAACTGCTCCGATGAACAGCTCATCG 1075
||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1019 ATATGGTTAGCTTTGCTATGGATCTCTTGGGCTCGAACTGCTCTGATGAACAGCTCATCG 1078
Query 1076 GAGCGAGGATTCTCAGGCAGTTTGCTGTAAATGAGCGGTTCGCAGAGGATACACTTGAGA 1135
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 GAGCGAGGATTCTTAGGCAGTTTGCTGTAAATGAGCGGTTCGCAGAGGATACACTTGAGA 1138
Query 1136 AGATCGGAATCAACTTACCTGTCATTGAAAGGTTGGTGGAAATGTTGAACTGGAAAGATC 1195
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1139 AGATCGGTATCAACTTACCTGTCATTGAAAGGTTGGTGGAGATGTTGAACTGGAAAGATC 1198
Query 1196 TGCAAGAAGAAGAGATTAGGAGATCAGCGGCTGAGATACTCTCAAAACTCGCTGGCAAAA 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 TGCAAGAAGAAGAGATTAGGAGATCAGCGGCTGAGATACTCTCAAAACTCGCTGGCAAAA 1258
Query 1256 AGCAGAACTCTCTCAGAGTTGCCGGAATCTCTGGTGCGATGGAATCGATTTCATCACTGT 1315
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1259 AGCAGAACTCTCTCAGAGTTGCTGGAATCTCTGGTGCGATGGAATCAATTTCATCACTGT 1318
Query 1316 TACAGAACACAAGATCTTTAGGTGAAGCTCCTGACGAGATTGGAGAGAAGAAAATCTTCC 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1319 TACAGAACACAAGATCTTTAGGTGAAGCTCCTGACGAGATTGGAGAGAAGAAACTCTTCC 1378
Query 1376 ACGACCATCATCTTCACTACGATTTCTGGAGGTTCAACAATTTGGGCCTCTTGATTCTAA 1435
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1379 ACGACCATCATCTACACTACGATTTCTGGAGGTTCAACAATTTAGGCCTCTTGATTCTAA 1438
Query 1436 AGAAATTATCCAGAGATCATGACAACTGTGGGAAAATCGGTAACACGAGAGGGCTTCTCC 1495
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1439 AGAAATTATCCAGAGATCATGACAACTGTGGGAAAATTGGTAACACGAGAGGGCTTCTCC 1498
Query 1496 CTAAGATCATTGACTTTACACACACAGACGCAACACTCTTGAAGGATGAGAACGCAGATA 1555
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1499 CTAAGATCATTGACTTCACGCACACAGACGCAACACTCTTGAAGGATGAGAACGCAGATA 1558
Query 1556 TGGTTCTGTCACAAGTCCTGACAGTGAAACGGTCGCTGCAGCTAGTGAAAATGTTAGTAA 1615
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 TGGTTCTGTCACGAGTCCTTACAGTGAAACGGTCGCTGCAGCTAGTGAAAATGTTAGTAA 1618
Query 1616 GCACAAGCGGCAACACCGGGAAATGTCTCAGGAGGGAGATCTCAGAAATTGTATTCACAA 1675
||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1619 GCACAAGTGGCAACACCGGGAAATGTCTCAGGAGGGAGATCTCAGAAATCGTCTTCACAA 1678
Query 1676 TCAGTAACTTGAGAGACGTATTGCGTCATGGAGTGAGATACCCAAAATTGCAGAAACTCG 1735
|||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct 1679 TCAGCAACTTGAGAGACGTATTGCGGCATGGAGTGAGATACCCGAAATTGCAGAAGCTCG 1738
Query 1736 GGATCGAGATTCTGAGCTTCCTCGCGCTTGAGACTGATGCGCGGGAGAGAATTGGCGTTA 1795
|||| |||||||| ||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1739 GGATTGAGATTCTTAGCTTCCTCGCGCTTGAGACTGATGGGCGGGAGAGAATTGCCGTTA 1798
Query 1796 CCTGGAGGTGTCTTGAAAGAGCTGTTCACCATCTTCTTGAAAAGAAAAACCACATGGGGA 1855
| |||||||||||||||||||||||||| ||| ||| | ||||| |||| |||||||||
Sbjct 1799 C-TGGAGGTGTCTTGAAAGAGCTGTTCAGCATTTTCCTAAAAAGTAAAAT-ACATGGGGA 1856
Query 1856 TGAGAGTGAAAACCGGGTCAGAATCGCTGCAG 1887
||||| |||||| |||||||| || |||||||
Sbjct 1857 TGAGAATGAAAAGCGGGTCAGGATGGCTGCAG 1888
Score = 1184 bits (641), Expect = 0.0
Identities = 738/785 (94%), Gaps = 5/785 (1%)
Strand=Plus/Plus
Query 1886 AGAGCAGAAGCAACTGCATCCAAATTCTGAAGCTCGGAGTCTTTGGAAGACTCGTGGATG 1945
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct 1916 AGAGCAGAAGCAACTGCATCCAAATTCTAAAGCTCGGAGTCTTTGGAAGACTTGTGGAGG 1975
Query 1946 CACTTGAAGTTCATTTGATCCGTGTCAATGCAGCGAGAGTGTTGAGAAACTTGTGCATAT 2005
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1976 CACTTGAAGTTCCTTTGATCCGTGTCAATGCAGCGAGAGTGTTGAGAAACTTGTGCATAT 2035
Query 2006 ATTCTGGACATGAATGCTTTCTCGACCTGAGATTTATTAAAACAGCAGCGCCTACGGTGT 2065
||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct 2036 ATTCTGGACATGAATGCTTTCTCGACCTGAGGTTCATTAAAACAGCAGCGCCTACTGTAC 2095
Query 2066 TGAAGTCAATAACATCAGGTGACAACAAATTACTGGAAGTGATGCTAGGATTAGCAGCAC 2125
||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 2096 TGAAGTCAATAACATCAGGTGACAATAAATTGCTGGAAGTGATGCTAGGATTGGCAGCAC 2155
Query 2126 AAGTGTTCAAATTCATGAGTTCAGAAGAAGCAAATATTGTTCTGACGGATTCAGGGATCA 2185
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2156 AAGTGTTCAAATTCATGAGTTCAGAAGAAGCAAACATTGTTCTGACGGATTCAGGGATCA 2215
Query 2186 AAAAGCTAGAACTTGCGAACACACTGGTATCGATTCTGAAAAAGCATGACAAGCCAGCAG 2245
|||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 2216 AAAAGCAAGAACTTGCAAACTCACTGGTTTCGATTCTGAAAAAGCATGACAAGCCAGCAA 2275
Query 2246 TCAAGGTTCCAAGAATCAGGAGGTTTGTGATAGAGCTTGCGATATGGATGATGGAAGATG 2305
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2276 TCAAGGTTCCAAGAATCAGGAGGTTTGTGATCGAGCTTGCGATATGGATGATGGAAGATG 2335
Query 2306 ATGTGGAGAACGTTCGGATGTTCAGAGATTTGGGTATGGAGAAAGAGCTCGTGAAGGTTC 2365
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2336 ATGTGGAGAACGTTGGGATGTTCAGGGATTTGGGTATGGAGAAAGAGCTCGTGAAGGTTC 2395
Query 2366 TGGAAACTACGGCTGAGCTTGAGAACTTCGATGTTTTCTCTGGCATGGTTGGAGTGAGCC 2425
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 2396 TGGAAACTACGGCTGAGCTTGAGAACTTTGATGTTTTCTCTGGCACGGTTGGAGTGAGCC 2455
Query 2426 GACAGAGCAGAACGGTTCATTGGTTAGCTGAACTGGCTTTAAAAATGCTTGAGGATGAAC 2485
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2456 GACAGAGCAGAACGGTTCATTGGTTAGCTGAATTGGCTTTAAAAATGCTTGAGGATGAAC 2515
Query 2486 AATCATAAGTTTTCATCTTCCTCTTGAGAAACTTAGAGC-TCTCTGCTTCAA-AGTTATG 2543
| || |||| || ||| |||||||||||||||| ||||| | || || | | |||||
Sbjct 2516 ATTCTTAAGGTT-CATGTTCCTCTTGAGAAACTCAGAGCGTG-CTAATT-ATGATTTATG 2572
Query 2544 AAATATATCGTTTAATTTTACAATCATTTAAAAAGTTTCTCAAAGTTCAAATTAGAGATA 2603
||| |||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||
Sbjct 2573 AAACATATCGTTTATTTTTACAATTATTTAAAAAGCTGCTCAAAGTTCAAATTAGAGATA 2632
Query 2604 GATCTCAAATTCCATCCGTATATACATATACCTTGTAAAGAAAGATACACTTCTCTCGTA 2663
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2633 TATCTCAAATTCCATCAGTATATACACATACCTTGTAAAGAAAGATACACTTCTCTCGTA 2692
Query 2664 ATAGT 2668
|||||
Sbjct 2693 ATAGT 2697
> AT5G18980.1 | Symbols: | ARM repeat superfamily protein | chr5:6334832-6338100
REVERSE LENGTH=2777
Length=2777
Score = 1823 bits (987), Expect = 0.0
Identities = 2049/2544 (81%), Gaps = 144/2544 (6%)
Strand=Plus/Plus
Query 21 AGAGGATGATCGGAGCATCCATTTGCAGGTGTTGGAGCTCCAAAAATTGGAAGAAGC-AC 79
||| || ||||| ||||| | ||| ||||| | |||||| ||||||||||| ||||| |
Sbjct 181 AGACGAAGATCGAAGCATTCGTTTACAGGTCTCGGAGCTTCAAAAATTGGAGGAAGCTA- 239
Query 80 GAGGCTCAAGCGACACCGTTTTGGAT-TATAGAAACAGCGTC--G-AAGGAGACAGCGGC 135
|||||||| |||||||||||| ||| || |||| ||| || | |||| |||||||||
Sbjct 240 TAGGCTCAACCGACACCGTTTTTGATCTA-AGAAGCAGTATCGAGAAAGGCGACAGCGGC 298
Query 136 GAAACCGCAGACGCAG-TGTCTAATTCCTCCGCGATCGCGTTTC--A-CAGACCAACA-T 190
|||||||||||||||| | |||| ||||||||||| |||||||| | | | ||||| |
Sbjct 299 GAAACCGCAGACGCAGCT-TCTATTTCCTCCGCGACCGCGTTTCGTAGAAAATCAACAGT 357
Query 191 CACCCGCGCCGGAGCAGAAGCTCACACTCTTCGCTCTCCGCCTCGC-AATCATAGAGAAA 249
| || || |||||| ||||||| || || |||||||| | ||||| | || | ||||||
Sbjct 358 C-CCAGCTCCGGAGAAGAAGCTAACGCTATTCGCTCTACAACTCGCGATTC-TTGAGAAA 415
Query 250 ATCGCCACT--AATCTCGGAACCCTA-GGTTTCATTTGGGCCACGGTGGTTCTTCTCGGC 306
| ||||||| || ||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct 416 ACCGCCACTGGAA--TCGGAACCCTAGGGTTT-ATCTGGGCCACGGTGGTTCTTCTCGGC 472
Query 307 GGATTCGCGATCACACTCGAAAAATCCGACTTCTGGTTCATCACCATCATTCTCCTCATC 366
|| ||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct 473 GGCTTCGCAATCACACTCGACGGTTCCGATTTCTGGTTCATCACCATCATTCTCCTAATC 532
Query 367 GAAGGCACTCGAATCTTCAGCAGAAGCCACGAGCTCGAGTGGCAGCACCATGCCACGTGG 426
||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct 533 GAAGGTGCTCGAATCTTCAGCAGAAGTCACGAGCTCGAGTGGCAACACCAAGCCACGTGG 592
Query 427 ACTGTATCCGGCGTCGGAATTAGTAGCTTCCGCG-TGATCCAATCAAGCTCAATTTCACT 485
|| || ||||||||||||| |||||||| |||| | ||| |||||||||| || ||
Sbjct 593 ACCGTCGCCGGCGTCGGAATCAGTAGCTTTCGCGCT-CTCCGATCAAGCTCAGCCTCGCT 651
Query 486 TCTCAGAAATCTTAAACGAATCAGCGAAGGGATCTTTAAGCCGATCCTCGATAATGGATT 545
| ||| |||||| ||||||||||| || ||||| ||||| | | |||
Sbjct 652 TTTCAAAAATCTAAAACGAATCAGTGATTCAATCTTCAAGCC-A----C-------GATC 699
Query 546 GAGAGAAGCGAC-G-ACGAGAATCG-GACG-ACAAGAGACCTTTGATCGTCGAACAACTC 601
|||||||||||| | | |||| | | | || | ||||| | || ||| | |
Sbjct 700 GAGAGAAGCGACGGCAAGAGACT-GCGTCGTTCCAGAGA-C---GA-CGT--TA-GA--- 747
Query 602 TGACATGGAAGAACTCAGAAGTTCCTCTTCTTCCATATGCGAGATGGCTT-TACATCTCC 660
|||||||||||||||||| || |||||||||||||| ||||||||| || | ||| |||
Sbjct 748 -GACATGGAAGAACTCAGACGTACCTCTTCTTCCATACGCGAGATGG-TTCTTCATTTCC 805
Query 661 AGCTAC-GTGAGCCGGCTTCTTTACTGGCTCCAGCTTTTGTCAGCGA-GTGCTTGTGTGG 718
|| ||| ||||| || ||||||||||||||||||||| | || || | | |||||||| |
Sbjct 806 AG-TACAGTGAGTCGTCTTCTTTACTGGCTCCAGCTTCTCTCTGCCACG-GCTTGTGTAG 863
Query 719 CTCTGTCTTCTTACAAGCTCGTAATGCACAACTACGGAGATGTTCA-AGATGGAGACT-T 776
|||| |||||||||||||| | | ||| ||||| ||||||||||| | | ||||| |
Sbjct 864 CTCTATCTTCTTACAAGCTTATTAGGCATAACTATGGAGATGTTCACA-AAGGAGA-TAC 921
Query 777 GGACAAAAGGAACAGACAAG-CCGCTCTCAGCATCTTCTACTCGCTTGCGC-TTGCCGAG 834
||| || ||||| |||| || | ||||||| || ||||||||||| || | |||| |||
Sbjct 922 GGATAAGAGGAATAGAC-AGTCTGCTCTCAATATATTCTACTCGCTCGC-CTTTGCTGAG 979
Query 835 GCGTTGTTGTTTCTTGCGGAGAAAGCTTACTGGGAGTGGGAGGTCAGTGTCTGTAACTTG 894
|||||||||||||||| |||||||| ||| ||||| ||| | |||||||| ||||| |||
Sbjct 980 GCGTTGTTGTTTCTTGTGGAGAAAGTTTATTGGGAATGGCAAGTCAGTGTTTGTAATTTG 1039
Query 895 CTTGAGAATGTGACTAGAGAGTGTGGGTTTGGGGTTAGTGGAATGGTCTCTATCAAGAGA 954
|||||||||||||||||||| |||| ||||||||||||||| |||| || ||||||||
Sbjct 1040 CTTGAGAATGTGACTAGAGAATGTGAGTTTGGGGTTAGTGGTTTGGTTTCGATCAAGAGG 1099
Query 955 TTCTTCTATGATGCTTACTCGAAGTCTGTCAATGGGAGTATCTTTGATGGTGTGAAGATG 1014
|| ||||||||| | || || |||| ||||||||||||||| ||||||||| ||||||||
Sbjct 1100 TTTTTCTATGATTCGTATTCCAAGTGTGTCAATGGGAGTATATTTGATGGTTTGAAGATG 1159
Query 1015 GATATGGTGAGCTTTGCTATGGATCTCTTGGGCTCAAACTGC-TCCGATGAACAGCTCAT 1073
||||| |||||||||| |||||| || ||| ||| |||| | || ||||||||||| ||
Sbjct 1160 GATATAGTGAGCTTTGGTATGGAGCTTTTGAACTCGAACT-CTTCTGATGAACAGCTTAT 1218
Query 1074 CGGAGCGAGGATTCTCAGGCAGTTTGCTGTAAATGAGCGGTTCGCAGAGGATACACTTGA 1133
|||| ||||||||| ||||||||| | || | ||| |||| | | ||||||||||||||
Sbjct 1219 TGGAGTGAGGATTCTTAGGCAGTTTTCAGTGACTGAACGGTACTCGGAGGATACACTTGA 1278
Query 1134 GAAGATCGGAATCAACTTACCTGTCATTGAAAGGTTGGTGGAAATGTTGAACTGGAAAGA 1193
|||||||||||||||||| || || ||||||||||||||||| |||||||||||||||||
Sbjct 1279 GAAGATCGGAATCAACTTTCCCGTTATTGAAAGGTTGGTGGAGATGTTGAACTGGAAAGA 1338
Query 1194 TCTGCAAGAAGAAGAGATTAGGAGATCAGCGGCTGAGATACTCTCAAAACTCGCTGGCAA 1253
||||||||| |||||||||||||||||||| ||||||||||| || ||||| ||||||||
Sbjct 1339 TCTGCAAGAGGAAGAGATTAGGAGATCAGCCGCTGAGATACTATCGAAACTAGCTGGCAA 1398
Query 1254 AAAGCAGAACTCTCTCAGAGTTGCCGGAATCTCTGGTGCGATGGAATCGATTTCATCACT 1313
||||||||| ||| | ||||| || || || |||||||| ||||||||||||||||| |
Sbjct 1399 AAAGCAGAATTCTTTGAGAGTCGCTGGGATTTCTGGTGCAATGGAATCGATTTCATCGTT 1458
Query 1314 GTTACAGAACACAAGATCTTTAGGTGAAGCTCCTGACGAGATTGGAGAGAAGAAAA-TCT 1372
|||| ||||||| ||||| | ||||||||||||||| |||||||||||||| ||| | |
Sbjct 1459 GTTAGAGAACACGAGATCATCAGGTGAAGCTCCTGATGAGATTGGAGAGAA-AAAGGTGT 1517
Query 1373 TCCACGACCATCATCTTCACTACGATTTCTGGAGGTTCAACAATTTGGGCCT-CTTGATT 1431
|||| |||||| |||| ||||||||||||||||| ||||||||||||||||| || |||
Sbjct 1518 TCCATGACCATAATCTACACTACGATTTCTGGAGATTCAACAATTTGGGCCTTCTA-ATT 1576
Query 1432 CTAAAGAAATTATCCAGAG-ATCATGACAACTGTGGGAAAA-TCGGTAACACGAGAGGGC 1489
|| ||||||||| ||| || |||||||||||||||| |||| |||| ||||||||||| |
Sbjct 1577 CTGAAGAAATTAGCCA-AGGATCATGACAACTGTGG-AAAACTCGGCAACACGAGAGGTC 1634
Query 1490 TTCTCCCTAAGATCATTGACTTT-ACACACACAGACGCAACA-CTCTTGAAGGATGAGAA 1547
|||| || || || ||||| ||| |||||| | || | || | || |||| |||||| ||
Sbjct 1635 TTCTTCCGAAAATAATTGA-TTTCACACACGCGGATGAAA-ATCTGTTGAGGGATGAAAA 1692
Query 1548 CGCAGATATGGTTCTGTCACAAGTCCTGACAGTGAAACGGTCGCTGCAGCTAGTGAAAAT 1607
|||||| || | ||||| || |||||| ||||||||||||| ||||| ||||||||
Sbjct 1693 CGCAGACATAGCGAGGTCACGGGTTCTGACACTGAAACGGTCGCTACAGCTGGTGAAAAT 1752
Query 1608 GTTAGTAAGCACAAGC-GGCAACACCGGGAAATGTCTCAGGAGGGAGATCTCAGAAATTG 1666
||||| ||||||| | || ||||| ||||| || ||| |||| |||||||| || ||||
Sbjct 1753 GTTAGCCAGCACAA-CAGGGAACACAGGGAAGTGCCTCCGGAGAGAGATCTCTGAGATTG 1811
Query 1667 TATTCACAATCAGTAACT-TGAGAGACGTATTGCGTCATGGAGTGAGATACCCAAAATTG 1725
|||||||| | || || | |||| || ||| || || || | |||||||||||| ||
Sbjct 1812 TATTCACAGTTAGCAA-TGTGAGGGATGTACTGAAACACGGGGCGAGATACCCAAAGCTG 1870
Query 1726 CAGAAACTCGGGATCGAGAT-TCTGAGCTTCCTCGCGCTTGAGACTGATGCGCGGGAGAG 1784
||||| |||||||| | ||| | ||| | ||| || |||||| | || || ||||||||
Sbjct 1871 CAGAAGCTCGGGATTGGGATAT-TGACCAACCTTGCACTTGAGGCCGAAGCTCGGGAGAG 1929
Query 1785 AATTGGCGTTACCTGGAGGTGT-CTTGAAAGAGCTGTTCACCATCTTCTTGAAAAGA-AA 1842
|||||||| || ||| ||||| || ||||||| |||||| ||| ||||| ||| | ||
Sbjct 1930 AATTGGCGGAAC-TGGTGGTGTTCT-GAAAGAGTTGTTCAACATTTTCTTTAAACGGGAA 1987
Query 1843 A-AC-C--ACATG--GGGA-TGAG--A-GTGAAA--A-C-C-G--GGTCA-G-AATCGC- 1882
| || | | ||| |||| |||| | ||| | | | | | || | | ||| ||
Sbjct 1988 ACACGCGGAGATGAAGGGAATGAGGGATGTGTGAGGATCGCTGCAGGAGAAGCAATAGCG 2047
Query 1883 -TGCA-GAGC---AGA--A-G--CAACTGCATCCAAATTCTGAAGCTCGGAGTCTTTGG- 1931
||| | | ||| | | ||||||| |||| |||| | ||| || || | |||
Sbjct 2048 ATGCTTGTGTTGGAGAGCAAGAGCAACTGCCTCCATGTTCTTAGGCTTGGGGT-TATGGG 2106
Query 1932 AAGACTCGTGGATGCACTTGAAGTTCATTTGATCCGTGTCAATGCAGCGAGAGTGTTGAG 1991
|||||| ||||| ||||||||||||| || ||||||||| || || ||||||||||||||
Sbjct 2107 AAGACTTGTGGAAGCACTTGAAGTTCCTTCGATCCGTGTGAACGCTGCGAGAGTGTTGAG 2166
Query 1992 AAACTTGTGCATATATTCTGGACATGAATGCTTTC-TCGACCTGAGATTTA-TTAAAACA 2049
|||| ||||| |||| || || |||||||||||| | ||||||| | || ||||| ||
Sbjct 2167 AAACATGTGCTTATACTCCGGGGATGAATGCTTTCAT-GACCTGA-AGTTCGTTAAAGCA 2224
Query 2050 GCAGCGCCTACGGTGTTGAAGTCAATAACATCAGGTGACAACAAATTACTGGAAGTGATG 2109
||||| || ||||| ||||| ||||||||||||| ||||||||||||| ||||||||||
Sbjct 2225 GCAGCACCAACGGTCTTGAAATCAATAACATCAGAAGACAACAAATTACAGGAAGTGATG 2284
Query 2110 CTAGGATTAGCAGCACAAGTGTTCAAATTCATGAGTTCAGAAGAAGCAAA-TATTGTTCT 2168
| |||||||||||||||||||| | ||||||||| ||| ||||| ||| ||| ||| |
Sbjct 2285 GTGGGATTAGCAGCACAAGTGTTTAGATTCATGAGCTCAAAAGAATCAAGCTAT-GTTTT 2343
Query 2169 GACGGATTCAGGGATCAAAA-AGCTAGAACTTGCGAACACACTGGTATCGATTCTGAAAA 2227
| | ||||||| ||||| | | | |||||| || ||| | |||| || ||||||||||
Sbjct 2344 CATGTATTCAGGCATCAAGAGA-CAAGAACTGGCAAACTCGTTGGTCTCAATTCTGAAAA 2402
Query 2228 AGCATGACAAGCCAGC-AGTCAAGGTTCCAAGAATCAGGAGGTTTGTGATAGAGCTTGCG 2286
|| | |||||||| || | | |||||||||||||||||||||||||| || |||||||||
Sbjct 2403 AGAACGACAAGCCCGCGATT-AAGGTTCCAAGAATCAGGAGGTTTGTAATTGAGCTTGCG 2461
Query 2287 ATATGGATGATGGAAGATGATG--T-GGAG-A-AC-GTTCGGAT-GTTCAGAGATTTGGG 2339
|| ||||||||||||||||||| | |||| | | || | || ||| ||||| ||||
Sbjct 2462 ATTTGGATGATGGAAGATGATGAGTTGGAGGATAATGTA-GCATTGTTTAGAGAGATGGG 2520
Query 2340 TATGGAGAAAGAGCTCGTGAAGGTTCTGGAAACTACGGCTGAGCTTGAGAACTTCGATGT 2399
| | ||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||
Sbjct 2521 TCTAGAGAAAGAGCTTGAGAAGGTTCTAGAAACTACGGCTGAGCTTGAGAACTTTGATGT 2580
Query 2400 TTTCTCTGGCA-TGGTTGGAGTGAGCCGACAGAGCAGAACGGTTCATTGGTTAGCTGAAC 2458
|||||| || | || ||||| | ||||| || |||||||| || |||| |||| || |
Sbjct 2581 TTTCTCCGGTACTG-TTGGACTAAGCCGTCATAGCAGAACTGTCCATTCACTAGCAGAGC 2639
Query 2459 TGGCTTTAAAAATGCTT-GAGGAT 2481
| || || |||| ||| ||||||
Sbjct 2640 TAGCCTTGGAAATTCTTAGAGGAT 2663
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132490896463
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5