BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477943
Length=3447
Score E
Sequences producing significant alignments: (Bits) Value
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 ... 5757 0.0
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | ... 3703 0.0
> AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11
| chr3:1940973-1946885 FORWARD LENGTH=3452
Length=3452
Score = 5757 bits (3117), Expect = 0.0
Identities = 3303/3393 (97%), Gaps = 12/3393 (0%)
Strand=Plus/Plus
Query 3 TTTATTTTACTTTTC-CACAAGCGAAGCGAACCCTCGATCTCAAGGCGAAAGCAGATTTC 61
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 26 TTTATTTTAC-TTTCTCACAAGCGAAGCGAACCCTCGATCTCAAGGCGAAAGCAGATTTC 84
Query 62 GTAGCTTCCATGGCGAGAAATTCGAATTCCGATGAGGCATTCTCGTCAGAGGAGGAAGAA 121
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 85 GTAGCTTCCATGGCGAGAAATTCGAATTCCGATGAGGCTTTCTCGTCAGAGGAGGAAGAA 144
Query 122 GAGCGGGTTAAGGATAATGAAGAAGAAGATGAGGAGGAGCTCGAGGCTGTTGCTCGTTCT 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 GAGCGGGTTAAGGATAATGAAGAAGAAGATGAGGAGGAGCTCGAGGCTGTTGCTCGTTCT 204
Query 182 TCTGGCTCCGACGATGACGAAGTAGTCGCCGCCGACGAATCCCCAGTCTCCGACGGAGAG 241
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 205 TCTGGCTCCGACGATGACGAAGTAGCCGCCGCCGACGAATCACCAGTCTCCGACGGAGAG 264
Query 242 GCTGCTCCCGTAGAAGATGATTACGAGGACGAAGAAGATGAGGAAAAAGCTGAAATCAGC 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 265 GCTGCTCCCGTAGAAGATGATTACGAGGACGAAGAAGATGAGGAAAAAGCTGAAATCAGC 324
Query 302 AAACGTGAGAAAGCCAGACTTAGAGAGATGCAGAAATTGAAGAAGCAGAAGATTCAAGAG 361
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 325 AAACGTGAGAAAGCCAGACTTAAAGAGATGCAGAAGTTGAAGAAGCAGAAGATTCAAGAG 384
Query 362 ATGCTGGACTCACAAAATGCTTCCATAGATGCGGATATGAACAATAAGGGAAAAGGGAGA 421
|||||||| || || ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 385 ATGCTGGAGTCGCAGAATGCTTCCATTGACGCGGATATGAACAATAAGGGAAAAGGGAGA 444
Query 422 CTGAAGTATCTTCTGCAGCAAACTGAGTTATTTGCACACTTTGC-AAAAGGTGATGCATC 480
||||||||||||||||||||||||||||||||||| |||||||| |||| |||||| |||
Sbjct 445 CTGAAGTATCTTCTGCAGCAAACTGAGTTATTTGCCCACTTTGCTAAAA-GTGATGGATC 503
Query 481 TTCTTCTCAGAAGAAGGCTAAAGGAAGGGGTCGTCATGCTTCCAAAATAACTGAAGAGGA 540
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 504 TTCTTCTCAGAAGAAGGCAAAAGGAAGGGGACGTCATGCTTCCAAAATAACTGAAGAGGA 563
Query 541 GGAAGACGAAGAGTATCTAAAGGAAGAAGAGGATGGCTTAACTGGATCTGGAAACACACG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 564 GGAAGACGAAGAGTATCTAAAGGAAGAAGAGGATGGCTTAACTGGATCTGGAAACACACG 623
Query 601 GTTACTCACACAGCCCTCTTGTATTCAAGGGAAGATGAGAGATTACCAATTAGCTGGTTT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 624 GTTACTCACACAGCCCTCTTGTATTCAAGGGAAGATGAGAGATTACCAATTAGCTGGTTT 683
Query 661 AAACTGGCTCATTCGGCTGTATGAGAATGGCATAAATGGAATTCTTGCTGATGAAATGGG 720
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 684 GAACTGGCTCATTCGTCTTTATGAGAATGGCATAAATGGAATTCTTGCTGATGAAATGGG 743
Query 721 TCTGGGGAAGACGCTTCAAACGATTTCTTTGTTGGCATACCTTCATGAATACAGGGGAAT 780
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 744 TCTGGGGAAGACGCTTCAAACGATTTCTTTGTTGGCATATCTTCATGAATACAGGGGAAT 803
Query 781 CAATGGTCCCCATATGGTGGTTGCTCCAAAATCAACACTTGGTAATTGGATGAACGAAAT 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 804 CAATGGTCCCCATATGGTGGTTGCTCCAAAATCAACACTTGGTAATTGGATGAACGAAAT 863
Query 841 TCGCCGGTTTTGTCCTGTCCTACGTGCTGTGAAGTTCCTTGGTAATCCTGAGGAGAGGAG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 864 TCGCCGGTTTTGTCCTGTCCTACGTGCTGTGAAGTTCCTTGGTAATCCTGAGGAGAGGAG 923
Query 901 ACATATTCGAGACGACCTGCTAGTTGCTGGGAAATTTGATATTTGCGTCACAAGCTTTGA 960
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 924 ACATATTCGAGAAGACCTGCTAGTTGCTGGGAAATTTGATATTTGTGTCACAAGCTTTGA 983
Query 961 GATGGCCATCAAAGAGAAGACAGCACTTCGTCGGTTTAGCTGGCGTTATATTATCATCGA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 984 GATGGCCATCAAAGAGAAGACAGCACTTCGTCGGTTTAGCTGGCGTTATATTATCATTGA 1043
Query 1021 TGAAGCGCATAGAATCAAGAACGAGAATTCTCTCCTTTCTAAAACCATGAGACTTTTTAG 1080
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1044 TGAAGCGCATCGAATCAAGAACGAGAATTCACTCCTTTCTAAAACCATGAGACTTTTTAG 1103
Query 1081 CACCAATTATCGGCTTCTTATCACGGGAACCCCCCTTCAGAATAATCTTCATGAACTGTG 1140
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1104 CACCAATTATCGGCTTCTTATCACGGGGACCCCCCTTCAGAATAATCTCCATGAACTGTG 1163
Query 1141 GGCTCTTCTAAATTTTCTTCTGCCTGAGATTTTTAGTTCAGCAGAGACTTTTGATGAATG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164 GGCTCTTCTAAATTTTCTTCTGCCTGAGATTTTTAGTTCAGCAGAGACTTTTGATGAATG 1223
Query 1201 GTTTCAAATTTCTGGTGAGAATGACCAGCAAGAAGTTGTTCAACAACTTCACAAGGTTCT 1260
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1224 GTTTCAAATTTCTGGTGAGAATGACCAGCAAGAAGTTGTGCAACAACTGCACAAGGTTCT 1283
Query 1261 TCGACCATTTCTTCTTCGAAGACTAAAGTCAGATGTTGAGAAAGGTTTGCCACCGAAGAA 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284 TCGACCATTTCTTCTTCGAAGACTAAAGTCAGATGTTGAGAAAGGTTTGCCACCGAAGAA 1343
Query 1321 GGAGACCATACTTAAAGTTGGTATGTCTCAGATGCAAAAGCAATACTACAAGGCTTTACT 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1344 GGAGACCATACTTAAAGTTGGTATGTCTCAGATGCAAAAGCAATACTACAAGGCTTTACT 1403
Query 1381 GCAGAAGGATCTTGAAGCGGTTAATGCTGGTGGAGAACGCAAACGTCTGCTAAACATTGC 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 GCAGAAGGATCTTGAAGCGGTTAATGCTGGTGGAGAACGCAAACGTCTGCTAAACATTGC 1463
Query 1441 AATGCAACTGCGTAAATGCTGCAATCACCCTTATCTCTTCCAGGGTGCAGAACCTGGTCC 1500
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1464 AATGCAACTGCGTAAATGCTGCAATCACCCCTATCTCTTCCAGGGTGCAGAACCTGGTCC 1523
Query 1501 CCCATATACCACAGGAGATCACCTTATAACAAATGCTGGTAAGATGGTTCTGTTGGATAA 1560
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1524 CCCATATACCACAGGAGATCACCTTATAACAAATGCTGGTAAGATGGTTCTCTTGGATAA 1583
Query 1561 ATTGCTTCCTAAGTTGAAAGAACGTGATTCAAGGGTTCTGATATTTTCTCAGATGACAAG 1620
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1584 ATTGCTTCCTAAGTTGAAAGAACGTGATTCAAGGGTGCTGATATTTTCTCAGATGACAAG 1643
Query 1621 ACTTTTGGATATTCTTGAGGACTATTTAATGTATCGTGGTTACCTGTATTGCCGCATTGA 1680
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1644 ACTTTTGGATATTCTTGAGGACTATTTAATGTATCGTGGTTACTTGTATTGCCGTATTGA 1703
Query 1681 TGGAAACACTGGTGGTGACGAACGAGATGCCTCCATAGAAGCCTACAACAAGCCAGGAAG 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1704 TGGAAACACTGGTGGTGACGAACGAGATGCCTCCATAGAAGCCTACAACAAGCCAGGAAG 1763
Query 1741 TGAGAAATTTGTTTTCTTGTTATCTACCAGAGCTGGAGGGCTTGGTATCAATCTTGCTAC 1800
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1764 TGAGAAATTTGTTTTCTTGTTATCTACTAGAGCTGGAGGGCTTGGTATCAATCTTGCTAC 1823
Query 1801 TGCAGATGTTGTTATCCTGTACGATAGTGATTGGAACCCACAAGTCGACTTGCAAGCTCA 1860
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1824 TGCAGATGTTGTGATCCTTTACGATAGTGATTGGAACCCACAAGTCGACTTGCAAGCTCA 1883
Query 1861 GGATCGTGCCCATAGAATTGGTCaaaaaaaaGAAGTTCAAGTGTTTCGATTCTGCACTGA 1920
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1884 GGATCGTGCCCATAGGATTGGTCAAAAAAAAGAAGTTCAAGTGTTTCGATTCTGCACTGA 1943
Query 1921 GTCTGCTATTGAGGAGAAAGTGATTGAAAGAGCTTACAAGAAGTTAGCACTTGATGCTCT 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1944 GTCTGCTATTGAGGAGAAAGTGATTGAAAGAGCTTACAAGAAGTTAGCACTTGATGCTCT 2003
Query 1981 GGTTATTCAGCAAGGGAGATTGGCAGAGCAGAAAACTGTCAATAAGGATGAGTTGCTTCA 2040
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2004 GGTTATTCAACAAGGGAGATTGGCAGAACAGAAAACTGTCAATAAGGATGAGTTGCTTCA 2063
Query 2041 AATGGTAAGATATGGTGCTGAGATGGTGTTCAGTTCTAAAGATAGCACAATCACAGACGA 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2064 AATGGTAAGATATGGTGCTGAGATGGTGTTCAGTTCTAAAGATAGCACAATCACAGACGA 2123
Query 2101 GGATATTGATAGAATCATTGCCAAAGGAGAAGAGGCAACAGCTGAACTTGATGCCAAGAT 2160
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2124 GGATATTGATAGAATCATTGCCAAAGGAGAAGAGGCAACAGCTGAACTTGATGCTAAGAT 2183
Query 2161 GAAGAAATTCACAGAAGATGCGATACAGTTTAAAATGGATGACAGT--G----CTGACTT 2214
||||||||||||||||||||| |||||||||||||||||||||||| | |||||||
Sbjct 2184 GAAGAAATTCACAGAAGATGCTATACAGTTTAAAATGGATGACAGTAAGGGTGCTGACTT 2243
Query 2215 CTATGATTTTGATGATGACAATAAGGATGAAAACAAGCTCGATTTTAAAAAGATTGTAAG 2274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2244 CTATGATTTTGATGATGACAATAAGGATGAAAACAAGCTCGATTTTAAAAAGATTGTAAG 2303
Query 2275 CGACAATTGGAATGATCCCCCCAAACGGGAGAGAAAGCGCAACTACTCTGAATCTGAATA 2334
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 2304 CGACAATTGGAATGATCCCCCCAAGCGGGAGAGAAAGCGCAACTACTCTGAATCTGAGTA 2363
Query 2335 CTTTAAGCAAACATTGCGGCAAGGTGCTCCAGCTAAACCTAAAGAGCCTAGAATTCCGCG 2394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2364 CTTTAAGCAAACATTGCGGCAAGGTGCTCCAGCTAAACCTAAAGAGCCTAGAATTCCGCG 2423
Query 2395 CATGCCCCAGTTGCACGATTTCCAGTTCTTTAACATTCAGAGATTGACCGAGTTGTATGA 2454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2424 CATGCCCCAGTTGCACGATTTCCAGTTCTTTAACATTCAGAGATTGACCGAGTTGTATGA 2483
Query 2455 AAAGGAAGTACGTTATCTCATGCAAACACATCAGAAAAATCAGTTGAAAGACACTATTGA 2514
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2484 AAAGGAAGTACGTTATCTCATGCAAACACATCAGAAAAATCAGTTGAAAGACACAATTGA 2543
Query 2515 TGTTGAAGAACCAGAAGGTGGAGATCCCTTAACTGCTGAAGAAGTAGAAGAAAAGGAGCG 2574
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |
Sbjct 2544 TGTTGAAGAACCAGAAGGTGGGGATCCCTTAACTACTGAAGAAGTAGAAGAAAAGGAGGG 2603
Query 2575 ATTATTGGAGGAGGGTTTCTCAACATGGAGCAGAAGAGATTTCAATACTTTCCTCAGGGC 2634
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2604 ATTATTGGAGGAGGGTTTCTCAACATGGAGCAGAAGAGATTTTAATACTTTCCTCAGGGC 2663
Query 2635 ATGTGAGAAGTATGGCCGCAACGACATAAAAAGCATTGCCTCTGAGATGGAAGGGAAAAC 2694
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2664 TTGTGAGAAGTATGGCCGCAACGACATAAAAAGCATTGCCTCTGAGATGGAAGGGAAAAC 2723
Query 2695 AGAGGAAGAAGTTGAAAGATATGCCAAAGTATTCAAAGAGCGATACAAGGAGCTGAACGA 2754
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 2724 AGAGGAAGAAGTTGAAAGATATGCCAAAGTATTTAAAGAGCGGTACAAGGAGCTGAACGA 2783
Query 2755 CTATGATAGAATAATTAAGAACATTGAGAGGGGAGAGGCAAGGATCTCTAGGAAAGACGA 2814
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2784 CTATGATAGAATCATTAAGAACATTGAGAGGGGAGAGGCAAGGATCTCTAGGAAAGACGA 2843
Query 2815 AATCATGAAAGCCATAGGGAAGAAGCTGGATCGTTACAGAAACCCTTGGCTGGAACTGAA 2874
||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 2844 AATCATGAAGGCCATAGGGAAGAAACTGGATCGCTACAGAAACCCTTGGCTGGAACTGAA 2903
Query 2875 GATTCAGTATGGTCAGAACAAAGGAAAGTTGTACAATGAAGAGTGCGACCGTTTCATGAT 2934
|||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||||||||
Sbjct 2904 GATTCAATATGGTCAGAACAAAGGCAAGCTGTACAATGAAGAGTGTGACCGTTTCATGAT 2963
Query 2935 CTGCATGATCCACAAACTTGGGTATGGGAATTGGGATGAGCTGAAGGCAGCATTCAGGAC 2994
||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct 2964 CTGCATGATTCACAAACTTGGTTATGGGAATTGGGATGAGCTAAAGGCAGCATTTAGGAC 3023
Query 2995 ATCGCCTTTGTTCAGGTTCGACTGGTTTGTGAAATCTCGCACGAGTCAGGAACTTGCAAG 3054
|||| || |||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 3024 ATCGTCTGTGTTCAGGTTTGACTGGTTTGTGAAATCCCGCACGAGTCAGGAACTTGCAAG 3083
Query 3055 AAGATGCGACACCCTGATTCGACTGATAGAGAAAGAGAACCAGGAGTTTGATGAAAGAGA 3114
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3084 AAGATGCGACACTCTGATTCGACTGATCGAGAAAGAGAACCAGGAGTTTGATGAAAGAGA 3143
Query 3115 GAGGCAAGCCCGTAAAGAGAAGAAGCTGGCAAAGAGTGCAACACCATCAAAACGACCTTT 3174
|||||||||||| |||||||||||||| || |||||||||||||||||||| ||||||||
Sbjct 3144 GAGGCAAGCCCGCAAAGAGAAGAAGCTCGCGAAGAGTGCAACACCATCAAAGCGACCTTT 3203
Query 3175 AGGAAGACAAGCCAGTGAGAGTCCTTCATCGACGAAGAAGCGAAAGCACCTGTCGATGAG 3234
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3204 AGGAAGACAAGCAAGTGAGAGTCCTTCATCGACGAAGAAGCGGAAGCACCTGTCGATGAG 3263
Query 3235 ATGAGATTATGTGTTTACGGATTTGTTGAGTCTTTGTTGTTACATATAGTTAAGCTAATG 3294
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 3264 ATGAGATTATGTGTTTACGGATCTGTCGAGTCTTTGTTGTTACATATAGTTAAGCTAATG 3323
Query 3295 TCAAAAACATAGCAAATGGATTTCATTCTGCTTTCGTGAATGTTTGTCGGCTGGTTTGAC 3354
| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 3324 TTAAAAACATAGCAAATGGATTTCATTCTGCTTTCATGAATGTTTGTC--CTGGTTTGAC 3381
Query 3355 TTGGATTTAATGAAATGACTTAATTATAATTTT 3387
|||||||||||||||||||||||||||||||||
Sbjct 3382 TTGGATTTAATGAAATGACTTAATTATAATTTT 3414
> AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17
| chr5:6195917-6202166 REVERSE LENGTH=3600
Length=3600
Score = 3703 bits (2005), Expect = 0.0
Identities = 2762/3129 (88%), Gaps = 45/3129 (1%)
Strand=Plus/Plus
Query 143 GAAGAAGATGAGGAGGAGCTCGAGGCTGTTGCTCGTTCTTCTGGCTCCGACGATGACGAA 202
||||||||||| || ||||||||||| || ||||| ||| | ||||| ||||| || ||
Sbjct 196 GAAGAAGATGATGACGAGCTCGAGGCCGTCGCTCGCTCTGCGGGCTCTGACGAGGAAGAT 255
Query 203 GTAGTCGCCGCCGACGAATCCCCAGTCTCCGACGGA-GAGGCTGCT-CCCGTAGAAGATG 260
|| | || | |||||||| | || ||||| ||| || |||| || | |||||||||||||
Sbjct 256 GTTG-CG-C-CCGACGAAGCACCTGTCTCTGAC-GACGAGGTTG-TCCCCGTAGAAGATG 310
Query 261 A---TTACGAGGACGAAGAAGATGAGGAAAAAGCTGAAATCAGCAAACGTGAGAAAGCCA 317
| | | |||||||||||||| ||||| |||||||| ||||||||||||||||| || |
Sbjct 311 ACGCTGAAGAGGACGAAGAAGACGAGGAGAAAGCTGAGATCAGCAAACGTGAGAAGGCTA 370
Query 318 GACTTAGAGAGATGCAGAA-ATTGAAGAAGCAGAAGATTCAAG-AGATGC-TGGACTCAC 374
|||| | ||| |||||||| | ||||||||||||| |||| || | || | | ||||| |
Sbjct 371 GACTCAAAGAAATGCAGAAGA-TGAAGAAGCAGAAAATTC-AGCAAAT-CTTAGACTCCC 427
Query 375 AAAATGCTTCCATAGATGCGGATATGAACAATAAGGGAAAAGGGA-GACTGAAGTATCTT 433
||||||||||||||||||| |||||||||||||| ||||| |||| || | |||||||||
Sbjct 428 AAAATGCTTCCATAGATGCTGATATGAACAATAAAGGAAAGGGGAGGA-TAAAGTATCTT 486
Query 434 CTGCAGCAAACTGAGTTATTTGCACACTTTGC-AAAAGGTGATGCATCTTCTTCTCAGAA 492
|||||||||||||||||||||||||| ||||| |||| |||| | ||| | || |||||
Sbjct 487 CTGCAGCAAACTGAGTTATTTGCACATTTTGCTAAAA-GTGACCCGTCTCCGTCCCAGAA 545
Query 493 GAAGGCTAAAGGAAGGGGTCGTCATGCTTCCAAAATAACTGAAGAGGAGGAAGACGAAGA 552
||||| |||||||||||||| ||| |||||||| |||| || || |||||||| |||||
Sbjct 546 GAAGGGAAAAGGAAGGGGTCGCCATTCTTCCAAACTAACCGAGGAAGAGGAAGATGAAGA 605
Query 553 GTATCTAAAGGAAGAAGAGGATGGCT-TAACTGGATCTGGAAACACACGGTTACTCACAC 611
|| | |||| |||||||||| ||| | || |||||||||| ||||||||| ||||| |
Sbjct 606 GTGTTTAAAAGAAGAAGAGGGTGG-TATAGTTGGATCTGGAGGCACACGGTTGCTCACTC 664
Query 612 AGCCCTCTTGTATTCAAGGGAAGATGAGAGATTACCAATTAGCTGGTTTAAACTGGCTCA 671
||||| |||||||||| |||||| | ||||||||||||||||||||||||||||||||||
Sbjct 665 AGCCCGCTTGTATTCAGGGGAAGTTAAGAGATTACCAATTAGCTGGTTTAAACTGGCTCA 724
Query 672 TTCGGCTGTATGAGAATGGCATAAATGGAATTCTTGCTGATGAAATGGGTCTGGGGAAGA 731
|||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 725 TTCGGCTGTATGAGAACGGCATAAATGGGATTCTTGCAGATGAAATGGGTCTGGGGAAGA 784
Query 732 CGCTTCAAACGATTTCTTTGTTGGCATACCTTCATGAATACAGGGGAATCAATGGTCCC- 790
|||||||||| |||||||||||||| ||||| ||||| ||||||||||| ||||| |||
Sbjct 785 CGCTTCAAACCATTTCTTTGTTGGCTTACCTGCATGAGTACAGGGGAATTAATGG-CCCT 843
Query 791 CATATGGTGGTTGCTCCAAAATCAACACTTGGTAATTGGATGAACGAAATTCGCCGGTTT 850
|||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct 844 CATATGGTAGTTGCTCCAAAATCAACCCTTGGTAACTGGATGAATGAAATTCGCCGATTT 903
Query 851 TGTCCTGTCCTACGTGCTGTGAAGTTCCTTGGTAATCCTGAGGAGAGGAGACATATTCGA 910
||||||||||| ||||||||||| || || |||||||| ||||| || |||||||||||
Sbjct 904 TGTCCTGTCCTGCGTGCTGTGAAATTTCTCGGTAATCCCGAGGAAAGAAGACATATTCGT 963
Query 911 GACGACCTGCTAGTTGCTGGGAAATTTGATATTTGCGTCACAAGCTTTGAGATGGCCATC 970
|| || ||||||||||| |||||||| || ||||| || ||||||||||||||||| |||
Sbjct 964 GAAGAACTGCTAGTTGCAGGGAAATTCGACATTTGTGTAACAAGCTTTGAGATGGCTATC 1023
Query 971 AAAGAGAAGACAGCACTT-CGTCGGTTTAGCTGGCGTTATATTATCATCGATGAAGCGCA 1029
|||||||||||| || || || || ||||||||||| ||||| ||||| |||||||| ||
Sbjct 1024 AAAGAGAAGACAACA-TTGCGCCGTTTTAGCTGGCGATATATAATCATTGATGAAGCACA 1082
Query 1030 TAGAATCAAGAACGAGAATTCTCTCCTTTCTAAAACCATGAGACTTTTTAGCACCAATTA 1089
| |||| || || |||||||| |||||||| ||||||||||||||||| |||||||| ||
Sbjct 1083 TCGAATTAAAAATGAGAATTCACTCCTTTCGAAAACCATGAGACTTTTCAGCACCAACTA 1142
Query 1090 TCGGCTTCTTATCACGGGAACCCCCCTTCAGAATAATCTTCATGAACTGTGGGCTCTTCT 1149
||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||
Sbjct 1143 TCGGCTTCTTATCACGGGAACCCCCCTTCAGAATAATCTCCATGAATTGTGGGCCCTTCT 1202
Query 1150 AAATTTTCTTCTGCCTGAGATTTTTAGTTCAGCAGAGACTTTTGATGAATGGTTTCAAAT 1209
||||||||||| |||||| |||||||||||||||| |||||||| || |||||||||||
Sbjct 1203 CAATTTTCTTCTCCCTGAGGTTTTTAGTTCAGCAGAAACTTTTGACGAGTGGTTTCAAAT 1262
Query 1210 TTCTGGTGAGAATGACCAGCAAGAAGTTGTTCAACAACTTCACAAGGTTCTTCGACCATT 1269
||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1263 TTCTGGTGAAAACGACCAGCAAGAAGTTGTTCAACAACTTCACAAGGTTCTGCGACCATT 1322
Query 1270 TCTTCTTCGAAGACTAAAGTCAGATGTTGAGAAAGGTTTGCCACCGAAGAAGGAGACCAT 1329
||||||||| || |||| |||||||| |||||||| || || || || |||||||| ||
Sbjct 1323 TCTTCTTCGGAGGTTAAAATCAGATGTAGAGAAAGGCTTACCTCCAAAAAAGGAGACAAT 1382
Query 1330 ACTTAAAGTTGGTATGTCTCAGATGCAAAAGCAATACTACAAGGCTTTACTGCAGAAGGA 1389
||| |||||||| |||||||| |||||||| || ||||||||||||||||||||||||||
Sbjct 1383 ACTCAAAGTTGGCATGTCTCAAATGCAAAAACAGTACTACAAGGCTTTACTGCAGAAGGA 1442
Query 1390 TCTTGAAGCGGTTAATGCTGGTGGAGAACGCAAACGTCTGCTAAACATTGCAATGCAACT 1449
|||||||| |||||||| |||||||||||||||||||||| | ||||| ||||||||| |
Sbjct 1443 TCTTGAAGTGGTTAATGGTGGTGGAGAACGCAAACGTCTGTTGAACATAGCAATGCAATT 1502
Query 1450 GCGTAAATGCTGCAATCACCCTTATCTCTTCCAGGGTGCAGAACCTGGTCCCCCATATAC 1509
||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1503 GCGGAAATGCTGCAATCACCCTTATCTCTTCCAGGGTGCGGAGCCTGGTCCCCCATATAC 1562
Query 1510 CACAGGAGATCACCTTATAACAAATGCTGGTAAGATGGTTCTGTTGGATAAATTGCTTCC 1569
||||||||||||||| ||||||| || |||||||||||||| || ||||||||||| ||
Sbjct 1563 TACAGGAGATCACCTTGTAACAAACGCAGGTAAGATGGTTCTCTTAGATAAATTGCTACC 1622
Query 1570 TAAGTTGAAAGAACGTGATTCAAGGGTTCTGATATTTTCTCAGATGACAAGACTTTTGGA 1629
||||||||| || || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1623 TAAGTTGAAGGATCGAGATTCAAGGGTTCTGATATTTTCTCAGATGACAAGGCTTTTGGA 1682
Query 1630 TATTCTTGAGGACTATTTAATGTATCGTGGTTACCTGTATTGCCGCATTGATGGAAACAC 1689
|||||| ||||| || |||||||||||||||||| ||| ||||| ||||||||||| ||
Sbjct 1683 TATTCTCGAGGATTACCTAATGTATCGTGGTTACCAGTACTGCCGTATTGATGGAAATAC 1742
Query 1690 TGGTGGTGACGAACGAGATGCCTCCATAGAAGCCTACAACAAGCCAGGAAGTGAGAAATT 1749
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1743 TGGTGGTGACGAACGAGATGCTTCCATAGAAGCCTATAACAAGCCAGGAAGTGAGAAATT 1802
Query 1750 TGTTTTCTTGTTATCTACCAGAGCTGGAGGGCTTGGTATCAATCTTGCTACTGCAGATGT 1809
|||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1803 CGTTTTCTTGTTATCCACTAGAGCTGGAGGACTTGGTATCAATCTTGCTACTGCAGATGT 1862
Query 1810 TGTTATCCTGTACGATAGTGATTGGAACCCACAAGTCGACTTGCAAGCTCAGGATCGTGC 1869
||| ||||| || |||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct 1863 TGTGATCCTCTATGATAGTGACTGGAACCCTCAAGTTGACTTGCAAGCTCAGGATCGTGC 1922
Query 1870 CCATAGAATTGGTCaaaaaaaaGAAGTTCAAGTGTTTCGATTCTGCACTGAGTCTGCTAT 1929
||||| ||||||||||||||||||||||||||||| || |||||||| ||| ||||||
Sbjct 1923 ACATAGGATTGGTCAAAAAAAAGAAGTTCAAGTGTTCCGGTTCTGCACCGAGAATGCTAT 1982
Query 1930 TGAGGAGAAAGTGATTGAAAGAGCTTACAAGAAGTTAGCACTTGATGCTCTGGTTATTCA 1989
||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1983 TGAGGCTAAAGTCATTGAGAGAGCTTACAAGAAGTTGGCACTTGATGCTCTGGTTATTCA 2042
Query 1990 GCAAGGGAGATTGGCAGAGCAGAAAACTGTCAATAAGGATGAGTTGCTTCAAATGGTAAG 2049
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||
Sbjct 2043 GCAAGGGAGATTGGCAGAACAGAAAACTGTTAATAAGGATGAGTTGCTTCAAATGGTGAG 2102
Query 2050 ATATGGTGCTGAGATGGTGTTCAGTTCTAAAGATAGCACAATCACAGACGAGGATATTGA 2109
|||||||||||| |||||||| |||||||||||||||||||| || || |||||||||||
Sbjct 2103 ATATGGTGCTGAAATGGTGTTTAGTTCTAAAGATAGCACAATTACGGATGAGGATATTGA 2162
Query 2110 TAGAATCATTGCCAAAGGAGAAGAGGCAACAGCTGAACTTGATGCCAAGATGAAGAAATT 2169
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2163 CAGAATCATTGCCAAAGGAGAAGAGGCAACGGCTGAACTTGATGCCAAGATGAAGAAATT 2222
Query 2170 CACAGAAGATGCGATACAGTTTAAAATGGATGACAGTGCTGACTTCTATGATTTTGATGA 2229
|| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 2223 TACTGAAGATGCAATACAGTTTAAAATGGATGACAGTGCTGACTTTTATGATTTTGACGA 2282
Query 2230 TGACAATAAGGATGAAAACAAGCTCGATTTTAAAAAGATTGTAAGCGACAATTGGAATGA 2289
|||||| |||||||| | |||| | ||||||||||||||||| || || |||||||||||
Sbjct 2283 TGACAACAAGGATGAGAGCAAGGTGGATTTTAAAAAGATTGTGAGTGAAAATTGGAATGA 2342
Query 2290 TCCCCCCAAACGGGAGAGAAAGCGCAACTACTCTGAA-TCTGAATACTTTAAGCAAACAT 2348
||| || ||| | |||||||||||||||||||||||| | ||||||||| |||||||| |
Sbjct 2343 TCCACCAAAAAGAGAGAGAAAGCGCAACTACTCTGAAGT-TGAATACTTCAAGCAAACGT 2401
Query 2349 TGCGGCAAGGTGCTCCAGCTAAACCTAAAGAGCCTAGAATTCCGCGCATGCCCCAGTTGC 2408
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 2402 TGCGACAAGGTGCTCCAGCTAAACCTAAAGAGCCTAGAATTCCACGCATGCCCCAATTGC 2461
Query 2409 ACGATTTCCAGTTCTTTAACATTCAGAGATTGACCGAGTTGTATGAAAAGGAAGTACGTT 2468
| ||||| |||||||||||||||||||| |||| ||| |||||||||| ||||| || |
Sbjct 2462 ATGATTTTCAGTTCTTTAACATTCAGAGGCTGACTGAGCTGTATGAAAAAGAAGTGCGAT 2521
Query 2469 ATCTCATGCAAACACATCAGAAAAATCAGTTGAAAGACACTATTGATGTTGAAGAACCAG 2528
| || |||||| |||||||||||| ||| |||||||||| ||||| ||||| ||||| |
Sbjct 2522 ACCTTATGCAAGCACATCAGAAAACTCAAATGAAAGACACAATTGAGGTTGATGAACCTG 2581
Query 2529 AAG--GT-GGAGATCCCTTAACTGCTGAAGAAGTAGAAGAAAAGGAGCGATTATTGGAGG 2585
||| || |||||||||||||||||||||||||| ||||||||||||| ||| |||| |
Sbjct 2582 AAGAAGTTGGAGATCCCTTAACTGCTGAAGAAGTGGAAGAAAAGGAGCTATTGCTGGAAG 2641
Query 2586 AGGGTTTCTCAACATGGAGCAGAAGAGATTTCAATACTTTCCTCAGGGCATGTGAGAAGT 2645
|||||||||||||||||||||||||||| |||||| | ||| | ||||| ||||||||||
Sbjct 2642 AGGGTTTCTCAACATGGAGCAGAAGAGACTTCAATGCCTTCATTAGGGCTTGTGAGAAGT 2701
Query 2646 ATGGCCGCAACGACATAAAAAGCATTGCCTCTGAGATGGAAGGGAAAACAGAGGAAGAAG 2705
||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||| |
Sbjct 2702 ATGGCCGGAACGACATAAAGAGTATTGCCTCTGAGATGGAAGGGAAAACTGAGGAAGAGG 2761
Query 2706 TTGAAAGATATGC-CAAAGTATTCAAAGAGCGATACAAGGAGCTGAACGACTATGATAGA 2764
||||| ||||||| ||| || ||| ||| |||||| || |||||||| || || || |||
Sbjct 2762 TTGAACGATATGCTCAA-GTTTTCCAAGTGCGATATAAAGAGCTGAATGATTACGACAGA 2820
Query 2765 ATAATTAAGAACATTGAGAG-GGGAGAGGCAAGGATCTCTAGGAAAGACGAAATCATGAA 2823
|| || ||||| |||||||| ||| || ||||| |||||||||||||| |||||||||||
Sbjct 2821 ATCATCAAGAATATTGAGAGAGGG-GAAGCAAGAATCTCTAGGAAAGATGAAATCATGAA 2879
Query 2824 AGCCATAGGGAAGAAGCTGGATCGTTACAGAAACCCTTGGCTGGAACTGAAGATTCAGTA 2883
||| || |||||||| |||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct 2880 AGCTATTGGGAAGAAACTGGATCGCTACAGAAACCCGTGGCTGGAACTGAAGATTCAATA 2939
Query 2884 TGGTCAGAACAAAGGAAAGTTGTACAATGAAGAGTGCGACCGTTTCATGATCTGCATGAT 2943
||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||| |
Sbjct 2940 TGGTCAGAACAAAGGGAAGCTGTACAATGAAGAGTGCGACCGTTTCATGATATGCATGGT 2999
Query 2944 CCACAAACTTGGGTATGGGAATTGGGATGAGCTGAAGGCAGCATT-CAGGACATCGCCTT 3002
||| |||||||||||||| || ||||||||||| |||||||| || | ||||||| || |
Sbjct 3000 CCATAAACTTGGGTATGGAAACTGGGATGAGCTAAAGGCAGCGTTTC-GGACATCCCCCT 3058
Query 3003 TGTTCAGGTTCGACTGGTTTGTGAAATCTCGCACGAGTCAGGAACTTGCAAGAAGATGCG 3062
|||| ||||| ||||||||||| ||||| ||||| | ||||||||||||||| ||||| |
Sbjct 3059 TGTTTAGGTTTGACTGGTTTGTAAAATCCCGCACAACTCAGGAACTTGCAAGGAGATGTG 3118
Query 3063 ACACCCTGATTC-GACTGATAGAGAAAGAGAACCAGGAGTTTGATGAAAGAGAGAGGCAA 3121
|||| || || | | |||| ||||||||||| || || |||||||| ||||||||||||
Sbjct 3119 ACACACTAAT-CAGGTTGATTGAGAAAGAGAATCAAGAATTTGATGAGAGAGAGAGGCAA 3177
Query 3122 GCCCGTAAAGAGAAGAAGCTGGCAAAGAGTGCAACACCATCAAAACGACCTTTAGGAAGA 3181
||||| |||||||||||||| ||||||||||||| |||||||||||||||| || ||
Sbjct 3178 GCCCGAAAAGAGAAGAAGCTTTCAAAGAGTGCAACGCCATCAAAACGACCTTCGGGTAGG 3237
Query 3182 CAAGCCAGTGAGAGTCCTTCATCGA--C-GAAGAAGCGAAAGCACCTGTCGATGAGATGA 3238
||||| | |||||| |||||||| | |||||| |||||||| ||||| ||| |||||
Sbjct 3238 CAAGCAAATGAGAGCCCTTCATCTCTTCTGAAGAAACGAAAGCAGCTGTCAATG-GATGA 3296
Query 3239 GATTATGTG 3247
|||||||
Sbjct 3297 --TTATGTG 3303
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 171570945060
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5