BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477959
Length=5817
Score E
Sequences producing significant alignments: (Bits) Value
AT3G06530.2 | Symbols: | ARM repeat superfamily protein | chr3... 2652 0.0
> AT3G06530.2 | Symbols: | ARM repeat superfamily protein | chr3:2022433-2033791
FORWARD LENGTH=6917
Length=6917
Score = 2652 bits (1436), Expect = 0.0
Identities = 1724/1860 (93%), Gaps = 32/1860 (2%)
Strand=Plus/Plus
Query 3980 GGGTTGTTACTAGCTTGCTTCAGCAGCAGTCGGATCGTAATGGGACGAAAAAGGTACTTG 4039
||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||
Sbjct 5010 GGGTTGTTACTAGCTTGCTTCAGCAGCAGACAGATTATAATGGGACGAAAAAGGTACTTG 5069
Query 4040 GACTTATAAGTGAGAGAGCTAAGGACACCTCTTCTTCTAAACTGAAACACAAGAGGAAGA 4099
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||
Sbjct 5070 GACTTATAAGTGAGAGAGCTAAGGACACCTCATCTTCTAAAATGAAACACAAGAGAAAGA 5129
Query 4100 TTTCCAATCAAAAAGCAAGAAATCCTTGGTTGCATTTGGATGAGGTTGCTGTTGATTCTT 4159
||||||||||||||| ||||||| |||||||| | |||||||||||||||||||||||||
Sbjct 5130 TTTCCAATCAAAAAGGAAGAAATTCTTGGTTGAACTTGGATGAGGTTGCTGTTGATTCTT 5189
Query 4160 TCGGGAAGATGTGTGAGGAGATTGTCCATCTAATTGATGAGACAGATGATGAGTCAGGTG 4219
||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||
Sbjct 5190 TCGGGAAGATGTGTGAGGAGATTGTCCATCTGATTAATGCGACAGATGATGAGTCAGGTG 5249
Query 4220 TTCCAGCT-AAACGAGCGGCCATTTCTACACTGGAAGTTTTGGCTGGCAGGTTTCCGTCT 4278
|||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 5250 TTCCAG-TAAAACGAGCTGCCATTTCTACACTGGAAGTTTTGGCTGGCAGGTTTCCATCT 5308
Query 4279 GGGCACCCAATATTCAGCAAATGCCTTGCATCTGTTGCAGAAGGCATCAGCTCAAAGAAT 4338
|| || ||||| ||||| |||||||||||| ||||||||||| ||||||| |||||||||
Sbjct 5309 GGTCATCCAATCTTCAGGAAATGCCTTGCAGCTGTTGCAGAATGCATCAGTTCAAAGAAT 5368
Query 4339 TTGGGAATTTCGTCAAGTTGTCTTCGCACAACTGGTGCACTGATCAATGTTATTGGACCT 4398
|||||| | ||||| || |||||||| |||||||||||||||||||||||| |||||||
Sbjct 5369 TTGGGAGTCTCGTCCAGCTGTCTTCGAACAACTGGTGCACTGATCAATGTTCTTGGACCA 5428
Query 4399 AAGGCGCTTGTTGAACTTCCACGCATAATGAAGAATTTGGTAAAACAATCGAGTGAAGTA 4458
|||||||| ||||||||||| ||||||||||||||||||||||||| ||| |||||||
Sbjct 5429 AAGGCGCTCATTGAACTTCCATGCATAATGAAGAATTTGGTAAAACAGTCGCTTGAAGTA 5488
Query 4459 TCATCTGCATCCAAGAGTGCTGGAAACACAACAGCTGAAGAGCAGTTACTTATGCTGTCT 4518
|||| ||||||| |||||| | ||||| ||||||||||||| ||||| ||||||||||||
Sbjct 5489 TCATTTGCATCCCAGAGTGGTCGAAACGCAACAGCTGAAGAACAGTTGCTTATGCTGTCT 5548
Query 4519 GTTCTAGTCACTTTGGAAGCAGTGATTGATAAACTTGGAGGTTTCCTTAATCCTCATCTT 4578
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 5549 GTTCTAGTCACTTTGGAAGCAGTGATTGATAAACTTGGAGGTTTCCTAAATCCTCATCTT 5608
Query 4579 GGAGATATTATGAAAGTCATGGTGCTGCATCCTGAGTATGTTTCTGACTTCGACAAGAAT 4638
||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct 5609 GGAGATATTATGAAAATCATGGTGCTACATCCTGAATATGTATCTGACTTCGACAAGAAT 5668
Query 4639 CTCAAGTCCAAAGCCAATACAATTAGGAGGCTCCTTACTGATAAGATACCTGTTCGTCTT 4698
|||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||
Sbjct 5669 CTCAAGTCCAAAGCCAATGCCATTAGGAGGCTCCTTACTGATAAAATACCTGTTCGTCTC 5728
Query 4699 ACTCTGCAACCTCTTCTACGAATATACGATGAGGCTGTTAGTTCTGGGAATGCAAGCTTG 4758
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5729 ACTCTGCAACCACTTCTACGAATATACAATGAGGCTGTTAGTTCTGGGAATGCAAGCTTG 5788
Query 4759 GTGATTGCTTTTGATATGTTAGAAAATCTAGTCGTGAAAATGGATAGATCATCTATCGTT 4818
|||||||||||| ||||||||||| |||| || |||||||||||||||||||||||||||
Sbjct 5789 GTGATTGCTTTTAATATGTTAGAAGATCTGGTTGTGAAAATGGATAGATCATCTATCGTT 5848
Query 4819 AGCAACCATGGAAAGATTTTTGATCAATGCTTAGTCGCCCTCGATATTCGACGTCAAAAT 4878
|||| |||||| |||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct 5849 AGCAGCCATGGGAAGATTTTTGATCAGTGCTTAGTTGCCCTTGATATTCGACGTCTAAAT 5908
Query 4879 CCAGCAGCTATTCAGAACATTGATGAAGCTGAGAGAAGTGTAACTAACGCAATGGTTGCT 4938
|||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 5909 CCAGCAGCAATTCAGAACATTGATGATGCTGAGAGAAGTGTAACTAGCGCAATGGTTGCT 5968
Query 4939 CTCACAAAGAAGCTAACTGAGTCCGAGTTCAGACCTCTCTTTATTAGGAGTATTGATTGG 4998
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 5969 CTCACAAAGAAGCTAACGGAGTCCGAGTTCAGACCTCTCTTTATTAGGAGTATTGATTGG 6028
Query 4999 GCAGAGTCCGA-GATTGTAGACGGATCCGGGAGTGAAAACAAGAACATCGACCGAGCTAT 5057
|||||||| || | |||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct 6029 GCAGAGTCAGATG-TTGTTGACGGATCAGGGAGTGAAAACAAGAGCATCGACCGAGCTAT 6087
Query 5058 ATCTTTCTATGGTCTGGTGAATAGACTCTGTGAGAGTCACAGGTCCATCTTTGTACCATA 5117
||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||
Sbjct 6088 ATCTTTCTATGGTCTGGTGGATCGACTCTGTGAGAGTCACAGGTCCATCTTTGTACCGTA 6147
Query 5118 TTTCAAATACGTGCTCGATGGTATTGTATCACATCTCACTAGTGCCGAAGCTTCGGTTTC 5177
||||||||||||||| |||||||||||| |||||||||| | ||| |||||||| |||||
Sbjct 6148 TTTCAAATACGTGCTTGATGGTATTGTAGCACATCTCACCACTGCTGAAGCTTCTGTTTC 6207
Query 5178 AACCAGGAAGAAAAAGAAGGCCAAAATTCAGGAAACGTCTGACACTATATC-ACCAAAAA 5236
||| |||||||||||||| |||||||||||| |||| |||||| ||||| | ||||||||
Sbjct 6208 AACTAGGAAGAAAAAGAAAGCCAAAATTCAGCAAACTTCTGACTCTATA-CAACCAAAAA 6266
Query 5237 GCTGGCATCTTAGGGCACTGGTGATTTCTTCCTTGAAGAATTGTTTTCTGCATGATACCG 5296
||||||||||||||||| | || |||||| |||||||||||||||||||||||||||||
Sbjct 6267 GCTGGCATCTTAGGGCATTAGTTCTTTCTTGCTTGAAGAATTGTTTTCTGCATGATACCG 6326
Query 5297 GCAGCTTGAAGTTTCTGGATACAAATAACTTCCAGGTGCTACTTAAGCCTATTGTATCAC 5356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6327 GCAGCTTGAAGTTTCTGGATACAAATAACTTCCAGGTGCTACTTAAGCCTATTGTATCAC 6386
Query 5357 AGCTTGTTGTTGAACCTCCATCTTCTTTAAAGGAGCATAAACATGTACCATCTGTGGATG 5416
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 6387 AGCTTGTTGTTGAACCTCCATCTTCTTTAAAGGAGCACCCACATGTACCATCTGTGGATG 6446
Query 5417 AGGTTGACGAATTATTGGTTTCATGCATCGGTCAAATGGCAGTAGCCTCAGGCTCTGACC 5476
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6447 AGGTTGATGATTTATTGGTTTCATGCATCGGTCAAATGGCAGTAGCCTCAGGCTCTGACC 6506
Query 5477 TCCTCTGGAAACCGCTGAACCATGAGGTGCTAATGCAAACGAGGAGTGAGAATCTACGGT 5536
|||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||
Sbjct 6507 TCCTCTGGAAACCGCTGAACCACGAGGTGCTAATGCAAACGAGGAGTGAGAGTGTACGGT 6566
Query 5537 CAAGGATATTGAGTTTGAGAAGTGTGAAACAGATGCTGGATAATCTGAAAGAAGAGTATC 5596
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6567 CAAGGATGTTGAGTTTGAGAAGTGTGAAACAGATGCTGGATAATCTGAAAGAAGAGTATC 6626
Query 5597 TTGTGTTGCTTGCTGAAACCATTCCATTCTTAGG-TGAGCTACTCGAAGACGTCGAGCTA 5655
||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||
Sbjct 6627 TTGTGTTGCTTGCTGAAACCATTCCATTCTT-GGCTGAGCTACTAGAAGACGTCGAGCTA 6685
Query 5656 TCTGTTAAATCTTTGGCTCAAGATATTATCAAACAGATGGAAGAGATGAGCGGTGAAAGT 5715
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 6686 TCTGTTAAATCTTTGGCTCAAGATATTATCAAACAAATGGAAGAGATGAGCGGTGAAAGT 6745
Query 5716 CTGACGCAATACCTCTGAAAC-------A-----A--C--C-GTT-GATTCCCAATTTTG 5757
||| || |||||||||||||| | | | | ||| | ||||||||||||
Sbjct 6746 CTGGCGGAATACCTCTGAAACTCGTTTGAGTGCTATGCAACCGTTAG-TTCCCAATTTTG 6804
Query 5758 ATTCttttttttGTCTTGTCTTGGTAGTAAATAACTAGATATGAAATACAACTTTCTGAA 5817
||||||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||
Sbjct 6805 ATTCTTTTTTT-GTCT-GTC--G-TAGTAAATAACTAGATATGAAATACAACTTTCTGAA 6859
Score = 2292 bits (1241), Expect = 0.0
Identities = 1534/1673 (92%), Gaps = 29/1673 (2%)
Strand=Plus/Plus
Query 2334 AGATGTTCCTCCTGGTGTCCAAATTGAAAGTCTCAAATGTTTTTCGTATCTTTGCTCTTG 2393
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 2833 AGATGTTCCTCCTCTTGTCCAAATTGAAAGTCTCAGATGTTTTTCGTATCTTTGCTCTAG 2892
Query 2394 CGGGAATAATGAATGGTTGAATCGAA-TTTTCTCAAGCTTTCCTGTACTTTTGGTTCCCA 2452
|||||||||||||||||||| || || |||| ||||||||||||||||||||||||||||
Sbjct 2893 CGGGAATAATGAATGGTTGATTC-AAGTTTTTTCAAGCTTTCCTGTACTTTTGGTTCCCA 2951
Query 2453 TGTCGAGTGCTAATCA-G--GTGACACCTGAAGACC-TTAA-AGTA--GCTG--C-CATG 2502
|||| |||| |||||| | || | | | | | || |||| ||| | | | | |
Sbjct 2952 TGTCAAGTGATAATCAGGACGTTAAAGCAGCTG-CCATTAATTGTATCGAGGCACTCTTC 3010
Query 2503 AA--TT--GTATTGAGGC-ACTCT-TC-AATCTTCGGTGGAGTGCTGCAATCTGTGGTAG 2555
|| || || | | | | | ||| | || | ||||||||||||||| |||||
Sbjct 3011 AACCTTCGGTGTCGTGTCGAATCTAGCAAAAAAAATG-GGAGTGCTGCAATCTACGGTAG 3069
Query 2556 TTCTTTTGATGAACTTTTGGGAATGATCGTGCAACAAAGGAGGCTTATATTGTCGGACAA 2615
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3070 TTCTTTTGATGAACTTTTGGGAATGATCGTGCAACAAAGGAGGCTTATATTGTCAGACAA 3129
Query 2616 TAAGTTTCTCCCATCCTACTTGACATCGTTGCTCAGTTCAACCAGTAATGACCTTCTAGT 2675
||||||| || |||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3130 TAAGTTTTTCGCATCGTACTTGACATCGTTGCTCAGTTCAACCACTAATGACCTTCTAGT 3189
Query 2676 GCCAGTTGACCTGCAAAAAAGGTTTGATCAATCCACAAAAGAAAACATTCTTTCGGTCAT 2735
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3190 GCCAGTTGGCCTGCAAAAAAGGTTTGATCAATCCACAAAAGAAAACATTCTTTCGGTCAT 3249
Query 2736 TTTATTGTGTGTGAAAGATTTACCAGCTTATGGGAAGCTAAGGGTCCTATCTTTGCTAAA 2795
||||||||||| | |||| |||| ||||||||||||||||| |||||||||||||||||
Sbjct 3250 TTTATTGTGTGCGGAAGACCTACCTGCTTATGGGAAGCTAAGAGTCCTATCTTTGCTAAA 3309
Query 2796 AGATCTGGGCATCATGCTCCTGCGTGATGAAATTGTTAAGTTATTGTCTCAACTTCTCGA 2855
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 3310 AGATCTGGGCATCATGCTTATGCGTGATGAAATTGTTAAGTTATTGTCTCAACTTCTTGA 3369
Query 2856 TAAACGTAGTCAAGACTACTTA-AAACTGGACAAAAC-TCTCCAGCCAATGTCAGACACT 2913
||||||||||||| ||||| || || ||||||||||| || ||||||| | |||||||||
Sbjct 3370 TAAACGTAGTCAATACTAC-TATAAGCTGGACAAAACTTC-CCAGCCATTATCAGACACT 3427
Query 2914 GAGGTCGATTTATTATGCCTTCTTCTGGAGTGCTCCATGATGCGTTCAGCATCGTTTAAA 2973
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 3428 GAGGTCGATTTATTATGCCTTCTTCTGGAGTGCTCCATGATGCGAACATCATCGTTTAAA 3487
Query 2974 GGGCAGTCTCTGGATGATTATATACTGAGCGCATTGAAAGTGGATTGTATGGCATCAGAA 3033
||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||||
Sbjct 3488 GGGCAGTCTCTTGATGATCATATACTGAGCGCATTGAATGTGGATTGTATGGCTTCAGAA 3547
Query 3034 CGTTCTGCTATTATTTCTCCTTGTCTTACCATTTTGGAGAAGCTAAGCAATCAATTTTAT 3093
||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3548 CGTCCTGCTGTTATTTCTCCTTGTCTTACCATTTTGGAGAAGCTAAGCAATCGATTTTAT 3607
Query 3094 GTTGGACTGAAGAGTGAGGTTCAGATTCGTTTCTTCCATATACTGGTGTCTATGTTTCGA 3153
| || |||| ||| ||| |||||||||||||||||||| | ||| |||||||||||||||
Sbjct 3608 GATGAACTGCAGACTGATGTTCAGATTCGTTTCTTCCACAAACTTGTGTCTATGTTTCGA 3667
Query 3154 AGTTCAAATGGCAGTATACAAAATGGTGCCAAAGAAGCTGTCTTACGCCTGAAGATTTCT 3213
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3668 AGTTCAAATGGCAGTATACAAAATGGTGCCAAAGAAGCTGTCTTACGCCTGAAGCTTTCT 3727
Query 3214 TCTTCAACGGTGGTCCATGCTCTTGATCATATCATTCAGCAGGATACTCTTGTTATTGGT 3273
|||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 3728 TCTTCAACGGTGGTCCTTGCTCTTGATCGTATCACTCAGCAGGATACTCTTGTTATTGGT 3787
Query 3274 TCTTTGAGCAAGAAGAAGAAACAGAAGAAAAGTTCAAAGTCATCTCCAGAAGAAGGCGTA 3333
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||
Sbjct 3788 TCTTTGAGCAAGAAGAAGAAACAGAAGAAAAATTCAAAGTCATGTCCAGAAGAAGACATA 3847
Query 3334 AATAGCGGGGAATTTCTAAGCGGAGAAAAGGCTCTCTCTTTCATTGCCGCGTTACTTGAC 3393
||||||| |||||||| ||| || |||||||||||||||||||||||| | |||||||||
Sbjct 3848 AATAGCGAGGAATTTCGAAGTGGGGAAAAGGCTCTCTCTTTCATTGCCTCATTACTTGAC 3907
Query 3394 ATGCTGCTTCTAAAGAAAGATCTAGCTCACAGGGAGTCCCTCGTAAGGCCCTTGTTTAAG 3453
||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 3908 ATGCTGCTTCTCAAGAAAGATCTAACTCACAGGGAGTCCCTCATAAGGCCCTTGTTTAAG 3967
Query 3454 CTCCTAGAAAGATCCATGCCTAAAGAATGGGTAAAAATTGCTTCTTCCGTTGAGGAAACA 3513
|||||| ||||||||||| ||||||||||||| |||||||||| ||| ||||||||||
Sbjct 3968 CTCCTACAAAGATCCATGTCTAAAGAATGGGTGAAAATTGCTTTTTCAATTGAGGAAACG 4027
Query 3514 TCAGTCCAACCTCCACAGGATGTTCGTGAAACAACTCCTGCCTCTATTTCTTCCATCCAA 3573
||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 4028 TCACTCCAGCCTCCACAGGATGTTCGTGAAACAACTCCTACCTTTATTTCTTCCATCCAA 4087
Query 3574 CAGACAT-TGCTCTTAATCCTGAAAGATATTTTTGATTCTCTAAATATGAATCCTTTGAA 3632
||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 4088 CAGAC-TCTGCTCTTAATCCTGAAAGATATTTTTGATTCTCTGAATATGAATCCTTTGAA 4146
Query 3633 GGCTGAAATAGCAAATGAAATCAATGTCAAAATGCTGGTTGAGTTGGCTCATTCATCAAA 3692
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4147 GGCTGAAGTAGCAAATGAAATCAATGTCAAAATGCTGGTTGAGTTGGCTCATTCATCAAA 4206
Query 3693 TGATGGAGTCACACGGAACCATATCTTCTCCTTGTTCACTGCAATTGTTAAATTTGTCCC 3752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4207 TGATGGAGTCACACGGAACCATATCTTCTCCTTGTTCACTGCAATTGTTAAATTTGTCCC 4266
Query 3753 TGATAGAG-TTTTGGACCATATTATCAGCATACTTACACTTGTTGGTGAATCAACTGTGA 3811
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4267 TGATA-AGGTTTTGGACCATATTATCAGCATACTTACACTTGTTGGTGAATCAACTGTGA 4325
Query 3812 CACAGATTGATAGCCACTCGAAGTCTATCTTTGAGGGGTTTATATCAGTGGTCATTCCAT 3871
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 4326 CACAGATTGATAGTCACTCGAAGTCTATCTTTGAGGGGTTTATATCAATGGTCATTCCAT 4385
Query 3872 TTTGGCTGTCCAAGACTAAGAGTGAGGAGCAGTTGCTGCTGATTTTTGTGAAAGTGTTAC 3931
|||||||||| |||||||||||||||||||||||| | | ||||||||||||||| ||||
Sbjct 4386 TTTGGCTGTCTAAGACTAAGAGTGAGGAGCAGTTGTTACAGATTTTTGTGAAAGTCTTAC 4445
Query 3932 CTGATATTGTTCAGCATAGAAGGCGTTCAATTGTAGCTTACTTACTGGGGGTT 3984
||||||||||| ||||||||||||||||||||||||||||||| ||||| |||
Sbjct 4446 CTGATATTGTTGAGCATAGAAGGCGTTCAATTGTAGCTTACTTGCTGGGAGTT 4498
Score = 1757 bits (951), Expect = 0.0
Identities = 1084/1147 (95%), Gaps = 14/1147 (1%)
Strand=Plus/Plus
Query 988 AGTTCGTCTGATGATCAATGCTGCGAAGCTTTAGCTTCAATAATTGAGGCTGTTCCAGTA 1047
||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||| |||
Sbjct 1241 AGTTCGTCTGATGATAAATGCTGCGAAGTTTTAGCTTCAATAATTGAGACTGTTCCCGTA 1300
Query 1048 AACAATTTGGTTGATCATTTGATCTCCAAGGTTTTCTCTTTATGTATGACACAATACCAG 1107
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1301 AGCAATTTGGTTGATCATTTGATCTCCAAGGTTTTCTCTTTATGTATGACACAATACCAG 1360
Query 1108 AAGAACAGTGATTTTAGATCTTCTACATC---TG--GG-AGCTGGGCCAAGAAAATTCTG 1161
||||||||||||||||||||||||||||| || || ||||||||||||||| |||||
Sbjct 1361 AAGAACAGTGATTTTAGATCTTCTACATCTGTTGTAGGAAGCTGGGCCAAGAAATTTCTG 1420
Query 1162 GTTGTTGTAAGCAAGAAGTATCCTGTTGAACTACGTGAAGCGGTTTCGAAATTTCTAGAG 1221
||||||||||||||||||||||||| ||||||||||| || ||| | |||||| |||||
Sbjct 1421 GTTGTTGTAAGCAAGAAGTATCCTGCTGAACTACGTGCCGCAGTTCCTAAATTTTTAGAG 1480
Query 1222 GCTACTGAAGGTCAGTCGAAGAAAGAGGATTTAAAGCTAGAGATGTTGTCTTGTATGCTG 1281
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCTACTGAAGTTCAGTCGAAGAAAGAGGATTTAAAGCTAGAGATGTTGTCTTGTATGCTG 1540
Query 1282 GATGGGAATTCAGACATGTC-CAATCCGTTTGTGGATTCAAAATTGTGGTTCCGGCTCCA 1340
|||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||
Sbjct 1541 GATGGGAATTCAGACATGTCTC-ACCCGTTTGTGGATTCAAAATTGTGGTTCCGGCTCCA 1599
Query 1341 CCATCCCAGGGCTGCTGTACGTTGTGCCGCGCTGTCTAGTCTAAATGGTGTTCTCAAGGA 1400
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1600 CCATCCCAGGGCTGCTGTACGTTGTGCCGCGCTTTCTAGTCTAAATGGTGTTCTCAAGGA 1659
Query 1401 TGATAGCTCTAAAGCAGAGAACCTTGTCACAATTCAGGATGCTATACTGCGTCAGCTTTG 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1660 TGATAGCTCTAAAGCAGAGAACCTTGTCACAATTCAGGATGCTATACTGCGTCAGCTTTG 1719
Query 1461 GGATGATGATCTGGCTGTTGTTCAGGCTGCCCTGTCCTTT-GATAAGTTGCCCAATATAG 1519
||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||
Sbjct 1720 GGATGATGATCTGGCTGTTGTTCAGGCTGCCCTCTC-TTTCGATAAGTTGCCCAATATAA 1778
Query 1520 TAACCTCTTCTGGTCTTCTGGATGCTTTGCTTCATGTGGTGAAACGATGTGTTGGCATTC 1579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1779 TAACCTCTTCTGGTCTTCTGGATGCTTTGCTTCATGTGGTGAAACGATGTGTTGGCATTC 1838
Query 1580 TCCTATCAGGAGTATCACATAATGTTCAACTGGCAAATGATGTTGTTGCTTTGTCTCTTA 1639
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1839 TCGTATCAGGAGTATCACATAATGTTCAACTGGCAGTTGATGTTGTTGCTTTGTCTCTTA 1898
Query 1640 AAATTGCTGTCTCAAGCTTCTCTAATCAAGCAGACTCTACTGAGAAAGTTACCTCCGCAA 1699
|||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||
Sbjct 1899 AAATTGCTGTCTCAAGCTTCGGTAATCAAACAGACTCTACTGAGAAAGTTACCTCTGCAA 1958
Query 1700 TGTTCCCATTTCTCTTAATTCAACCGAAGACGTGGAATTTAAATCTACATGTGCTAAAGT 1759
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct 1959 TGTTCCCATTTCTCTTAATTCAGCCGAAGACGTGGAATTTAAATCTACTTGTGCTAAAGT 2018
Query 1760 TGGGGAAGGATGTTAACTGGCCACTTTTCAAGAATCTTGGTACTGATGCTGAGA-TGAAA 1818
|||| |||||||||||||||||||||||||||||||||| | |||||| || || |||||
Sbjct 2019 TGGGAAAGGATGTTAACTGGCCACTTTTCAAGAATCTTGCTGCTGATGATG-GAATGAAA 2077
Query 1819 AAGCTCCCAGATATCATGTCTACAAACTTATCCTCGATTAGCATGGATATTATAAACAAT 1878
|||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| ||
Sbjct 2078 AAGCTCCCCGATATCATGTCTACAAACTTATCCTCAATTAGCATGGATATTATTAACGAT 2137
Query 1879 TTGGGGGAAGCACTTTCCTTGGATCCTGATGAGCGTAGGATTGAGCTTATTGAGAGTGCC 1938
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2138 TTGGGAGAAGCACTCTCCTTGGATCCTGATGAGCGTAGGATTGAGCTTATTGAGAGAGCG 2197
Query 1939 TGCAACTTTAAGCTCTCTGAAGTCTTGAAAACATGCAGCAATATCAAAT-TGACAGAACA 1997
||||||| ||||||||||||||| ||| ||||||||||||||||||||| | |||||||
Sbjct 2198 TGCAACTATAAGCTCTCTGAAGTTTTGGAAACATGCAGCAATATCAAATGTT-CAGAACA 2256
Query 1998 GGAACGTAACAAGTTGCAGAAGGGACTACTGATCCGTGAAAGTGTGTCCACATTGAACAT 2057
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2257 GGATCGTAACAAGTTGCAGAAGGGACTACTGATCCGTGAAAGTGTGTCCGCATTGAACAT 2316
Query 2058 GGATATCATTAACAAGCTGATGGACGCATTTATGATGCACCCTGCTGATTATATTCAGTG 2117
||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 2317 AGATGTCATTAACAAGCTGGTGGAAGCATTTATGATGCACCCTGCTGATTATATTCAGTG 2376
Query 2118 GCTTACT 2124
|||||||
Sbjct 2377 GCTTACT 2383
Score = 1506 bits (815), Expect = 0.0
Identities = 931/989 (94%), Gaps = 0/989 (0%)
Strand=Plus/Plus
Query 1 ATGAGTTCTTCTATAGTGTCACAGTTACAGGCTCTCAAGTCAGTGTTAAAAGCCGATACA 60
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 164 ATGAGTTCTTCAATAGTGTCACAGTTACAGGCTCTCAAGTCAGTGTTACAAGCCGATACA 223
Query 61 GAGCCTTCGAAGAGACCCTTCACACGCCCTTCAATTCTCTTCAGTCCTAAAGAAGCAGCT 120
|||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 224 GAGCCTTCCAAGAGACCTTTCACACGCCCTTCGATTCTCTTCAGTCCTAAAGAAGCAGCT 283
Query 121 GATTTCGATATTGAATCCATCTACGAGCTCGGGCTCAAAGGTCTAGAAGTACTTGGAAAC 180
||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 284 GATTTCGATATCGAATCAATTTACGAGCTCGGGCTCAAAGGTCTAGAAGTACTTGGAAAC 343
Query 181 AAAGATGAGAGGTTTAAGAATTACATGAACGACTTGTTTAGTCATAAAAGTAGAGAAGTT 240
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||
Sbjct 344 AAAGATGAGAGGTTTAAAAATTACATGAACGACTTGTTTAGTCATAAAAGTAAAGAAATT 403
Query 241 GATAGGGAATTGCTGGGTAAAGAAGAAAATGCTCGGATTGATGCATCAATCAGTTCGTAT 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 404 GATAGGGAATTGCTGGGTAAAGAAGAAAATGCTCGGATTGATTCATCAATCAGTTCGTAT 463
Query 301 CTACGTTTACTCTCGGGCTATCTTCAATTCCGTGCTTCTTTGGAGACCCTTGAGTATCTT 360
|||||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||
Sbjct 464 CTACGTTTACTCTCTGGTTATCTTCAATTTCGTGCTTCCTTGGAGACCCTTGAGTATCTC 523
Query 361 ATACGAAGATACAAGATTCATATATACAACGTAGAAGATGTGGTTCTATGCGCTTTGCCA 420
|||||| ||||||||||||||||||||||| | |||||||||||||||||||| ||||||
Sbjct 524 ATACGACGATACAAGATTCATATATACAACTTGGAAGATGTGGTTCTATGCGCCTTGCCA 583
Query 421 TACCACGACACACATGCCTTTGTCCGCATTGTTCAGCTACTTTCAACTGGCAATAGCAAG 480
||||| ||||||||||||||||||||||||||||| || ||||| ||||| ||| ||||
Sbjct 584 TACCATGACACACATGCCTTTGTCCGCATTGTTCAACTGCTTTCTACTGGAAATTCCAAG 643
Query 481 TGGAAATTTCTGGATGGTGTTAAAAATTCAGGTGCTCCACCTCCTAGATCGGTTATCGTT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 644 TGGAAATTTCTGGATGGTGTTAAAAATTCAGGTGCTCCACCTCCTAGATCGGTTATCGTT 703
Query 541 CAGCAATGTATACGTGATCTGGAAGTTTTGGAGACCTTGTGTGACTATGCATCTCGGACT 600
|||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||
Sbjct 704 CAGCAATGTATACGTGATAAACAAGTTTTGGAGGCCTTGTGTGACTATGCATCTCGTACT 763
Query 601 AAGAAGTATCAGCCTTCAAAACCTGTGGTTAGCTTCTCCACAGCAGTTGTTGTTGGGGTT 660
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 764 AAGAAGTATCAGCCTTCAAAACCTGTGGTTAGCTTCTCCACCGCAGTTGTTGTTGGGGTG 823
Query 661 CTAGGTTCAGTTCCAACTGTTGATGGAGATATTGTAAAGAGGATTTTGCCATTTGTGGAC 720
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 824 CTCGGTTCAGTTCCAACTGTTGATGGAGATATTGTAAAGACGATTTTGCCATTTGTGGAC 883
Query 721 TCTGGTCTTCAATCCGGTGTGAAAGGATGTTTAGATCAACAGGCTGGAGCGTTAATGGTT 780
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 TCTGGTCTTCAATCTGGTGTGAAAGGATGTTTAGATCAACAGGCTGGAGCGTTAATGGTT 943
Query 781 GTTGGCATGTTGGCAAACAGAGCCATGCTCAATAGTAATCTTATCAAGCGGTTTATGAGG 840
||||||||||||||||||||||| |||| |||| ||||||||||||||| || ||||||
Sbjct 944 GTTGGCATGTTGGCAAACAGAGCTGTGCTAAATACTAATCTTATCAAGCGCTTGATGAGG 1003
Query 841 TCCATCATTGACACTGCTCGTGAACATGCCAAAGAATCTTCTGACCCCCATTCACTTCGG 900
|||||||| |||| || ||||||||||||||| |||||||||||||| ||||| |||||
Sbjct 1004 TCCATCATCGACATTGGTCGTGAACATGCCAAGGAATCTTCTGACCCGCATTCGCTTCGA 1063
Query 901 TTGTCATTTATGGCATTGATAAATTTTGTTCAGTTGCAATCTGTGGACTTGATCCCAAGG 960
|||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 1064 TTGTCACTTATGGCCTTGATCAATTTTGTTCAGCTGCAATCTGTGGACTTGATCCCAAGG 1123
Query 961 AAAGCATTGGATCTTCTCAACGAAATAAG 989
||||||||||||||| | |||||||||||
Sbjct 1124 AAAGCATTGGATCTTTTTAACGAAATAAG 1152
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 290221911049
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5