BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477961
Length=2045
Score E
Sequences producing significant alignments: (Bits) Value
AT3G06550.2 | Symbols: | O-acetyltransferase family protein | ... 2820 0.0
AT5G46340.1 | Symbols: | O-acetyltransferase family protein | ... 387 3e-106
> AT3G06550.2 | Symbols: | O-acetyltransferase family protein
| chr3:2039081-2042959 REVERSE LENGTH=2329
Length=2329
Score = 2820 bits (1527), Expect = 0.0
Identities = 1610/1650 (98%), Gaps = 6/1650 (0%)
Strand=Plus/Plus
Query 195 TCTCTGATCGGAAATGGCGATTTCAAGCCCTGTTACACCTGGGCTAATGTCGGTGGT-TC 253
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 283 TCTCTGATCGGAAATGGCGAGTTCAAGCCCTGTTACACCTGGGCTAATGTCGGTGGTGT- 341
Query 254 TCGGGATTGTGCCGGTGATCGTGGCTTGGCTATACTCTGAGTATCTGCACTATGCTAAAC 313
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 TCGGGATTGTGCCGGTGATCGTGGCTTGGCTATACTCTGAGTATCTGCACTATGCTAAAT 401
Query 314 ACTCGGTCTCCGCCAAAACTAGGCATTCTGATGTCAATTTGGTGGAAATTGCGAAAGATT 373
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 402 ACTCGGTCTCCGCCAAAACTAGGCACTCTGATGTCAATTTGGTGGAAATTGCGAAAGATT 461
Query 374 TTGTTAAAGAAGATGACAAAGCTCTTTTAATAGAAGATGGAGGTGGTCTTCAATCAGCTT 433
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 462 TTGTTAAAGAAGATGACAAAGCTCTTTTAATAGAAGATGGAGGTGGTCTCCAATCAGCTT 521
Query 434 CTCCTAGAGCCAAGGGCCCAACCACACATTCTCCTCTCATCAGGTTTGTCCTCTTGGATG 493
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 522 CTCCTAGAGCCAAAGGCCCGACCACACATTCTCCTCTCATCAGGTTTGTCCTCTTGGATG 581
Query 494 AGTCGTTCTTGGTTGAGAACAGGCTGACTTTAAGAGCAATAATCGAGTTTGC-GCTACTT 552
|||||||||||||||||||||||||||||||||| |||||||| |||||||| | |||||
Sbjct 582 AGTCGTTCTTGGTTGAGAACAGGCTGACTTTAAGGGCAATAATTGAGTTTGCAG-TACTT 640
Query 553 ATGGTATACTTTTACATATGTGACCGCACAGATGTCTTCAATTCATCAAAGAAGAGTTAC 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 641 ATGGTATACTTTTACATATGTGACCGCACAGATGTCTTCAATTCATCAAAGAAGAGTTAC 700
Query 613 AACCGGGATCTCTTTCTGTTCCTTTACTTCCTTCTCATCATCGTTTCAGCGATAACTTCG 672
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 701 AACCGGGATCTCTTTCTGTTCCTTTACTTCCTTCTCATCATCGTTTCAGCGATAACTTCA 760
Query 673 TTCACGATACATAATGATAAATCACCATTCAGCGGAAAAGCCATCATGTACTTGAATAGG 732
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 TTCACGATACATACTGATAAATCACCATTCAGCGGAAAAGCCATCATGTACTTGAATAGG 820
Query 733 CATCAAACCGAGGAGTGGAAAGGCTGGATGCAGGTCCTTTTCTTGATGTACCACTACTTT 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 821 CATCAAACCGAGGAGTGGAAAGGCTGGATGCAGGTCCTTTTCTTGATGTACCACTACTTT 880
Query 793 GCTGCTGCAGAGTACTATAATGCGATCCGTGTTTTCATTGCTTGCTATGTATGGATGACT 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 881 GCTGCTGCAGAGTACTATAATGCGATCCGTGTTTTCATTGCTTGCTATGTATGGATGACT 940
Query 853 GGATTTGGGAATTTTTCTTATTATTACATTCGCAAGGACTTTAGTCTTCCAAGGTTTGCA 912
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 941 GGATTTGGGAATTTTTCTTATTATTACATTCGCAAGGACTTTAGCCTTGCAAGGTTTGCA 1000
Query 913 CAGATGATGTGGCGGCTAAATTTCCTGGTCATAGTT-TCCTGCATCGTCCTCAACAACAG 971
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1001 CAGATGATGTGGCGGCTAAATTTCCTGGTCATA-TTCTCCTGCATCGTCCTCAACAACAG 1059
Query 972 TTACATGCTATACTACATCTGCCCAATGCACACTCTGTTTACTCTGATGGTCTATGGAGC 1031
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 1060 TTACATGCTATACTACATCTGCCCAATGCACACTCTGTTTACTCTAATGGTCTATGGGGC 1119
Query 1032 ACTTGGCATTCTGAACAAGTATAATGAGATGGGTTCAGTCATAGCTGCCAAATTTTTTGC 1091
|||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1120 ACTTGGTATTATGAGCAAGTATAATGAGATGGGTTCAGTCATAGCTGCCAAATTTTTTGC 1179
Query 1092 CTGCTTCGTTGTTGTTATCATCGTTTGGGAAATTCCGGGCGTTTTTGAATGGATTTGGAG 1151
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1180 CTGCTTCGTTGTTGTTATCATCGTTTGGGAAATTCCTGGCGTTTTTGAATGGATTTGGAG 1239
Query 1152 TCCTTTTACACTCCTAATGGGTTACAATGATCCCGCAAAACCACAGCTTCCCCTCTTGCA 1211
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1240 TCCATTTACACTCCTAATGGGTTACAATGATCCCGCAAAACCTCAGCTTCCCCTCTTGCA 1299
Query 1212 TGAGTGGCATTTCCGCTCTGGCCTTGATCGGTACATATGGATAATCGGGATGCTATATGC 1271
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1300 TGAGTGGCATTTCCGCTCTGGACTTGATCGGTACATATGGATAATCGGGATGCTATATGC 1359
Query 1272 ATACTACCACCCAACTGTTGAAAGTTGGATGGATAAACTGGAGGAAGCTGAGATGAAGTT 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1360 ATACTACCACCCAACTGTTGAAAGTTGGATGGATAAACTGGAGGAAGCTGAGATGAAATT 1419
Query 1332 CAGGATGGCTATCAAAACAACTGTGGCACTGATAGCACTAACGGTGGGATATTTTTGGTA 1391
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1420 CAGGGTGGCTATCAAAACATCTGTGGCACTGATAGCACTAACGGTGGGATATTTTTGGTA 1479
Query 1392 CGAGTACATATACAAGCTGGACAAGCTAACTTACAACAAATATCATCCTTACACCTCTTG 1451
|||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1480 CGAGTATATATACAAGATGGACAAGTTAACTTACAACAAATATCATCCTTACACCTCTTG 1539
Query 1452 GATTCCAATAACTGTTTATATTTGTCTCCGGAACATCACCCAGTCTTTCCGCGGCTACAG 1511
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1540 GATTCCAATAACTGTTTATATCTGTCTCCGGAACATCACCCAGTCTTTCCGCGGCTACAG 1599
Query 1512 TTTAACCCTTCTGGCGTGGCTTGGGAAGATAACACTGGAGACATATATCTCCCAGTTTCA 1571
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1600 TTTGACCCTTCTGGCGTGGCTTGGAAAGATAACACTGGAGACATATATCTCCCAGTTTCA 1659
Query 1572 TATATGGCTCAGATCTGGAGTTCCTGATGGTCAACCCAAATTACTACTATCTCTTATCCC 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1660 TATATGGCTCAGATCTGGAGTTCCTGATGGTCAACCCAAATTACTACTATCTCTTGTCCC 1719
Query 1632 GGAGTACCCATTGTTGAACTTCATGCTCACTACTTCGATTTACGTCGCTATCTCTTATAG 1691
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1720 GGATTACCCATTGTTGAACTTCATGCTCACTACTTCGATTTACGTCGCTATCTCTTATAG 1779
Query 1692 GCTCTTTGAGCTTACCAACACTTTGAAAACAGCCTTCATACCAACAAAAGACGACAAACG 1751
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1780 GCTCTTTGAGCTTACCAACACTTTGAAAACAGCCTTCATACCAACCAAGGACGACAAACG 1839
Query 1752 CCTTGTCTACAACACGATCTCAGCACTCATAATCTGCACTTGTCTCTACTTTTTCTCATT 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840 CCTTGTCTACAACACGATCTCAGCACTCATAATCTGCACTTGTCTCTACTTTTTCTCATT 1899
Query 1812 TATTCTTATCACAATTCCCCAAAAACTGGT 1841
||||||||||||||||||||||||||||||
Sbjct 1900 TATTCTTATCACAATTCCCCAAAAACTGGT 1929
Score = 257 bits (139), Expect = 3e-67
Identities = 151/157 (96%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 1834 AAACTGGTGTGAAGCACTTATGAACCGGACCAGAGTGGATTATTTGAATGAATTCATAGG 1893
|||| |||||||||||||| ||||||||||||||||||| |||| |||||||||||||||
Sbjct 2082 AAACAGGTGTGAAGCACTTCTGAACCGGACCAGAGTGGACTATTCGAATGAATTCATAGG 2141
Query 1894 AGTTGAACTACGGGATATGGTAGATATACGAAGATAGAAATCAGAGGTAGATGCATACAA 1953
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2142 AGTTGAACTACGCGATATGGTAGATATACGAAGATAGAAATCAGAGGTAGATGCATACAA 2201
Query 1954 GGTTGCTGTAATGTCATCTTTCTGTATATTTATTTAT 1990
||||||||||||||||||||||||||||||||||||
Sbjct 2202 TGTTGCTGTAATGTCATCTTTCTGTATATTTATTTAT 2238
Score = 67.6 bits (36), Expect = 5e-10
Identities = 42/45 (93%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 2001 TGTTCACGATGATGTTAAGACTTATTATTGTTTACTCCAAGTTAA 2045
||||||||||||||||||||||||||||||| || | ||||||||
Sbjct 2273 TGTTCACGATGATGTTAAGACTTATTATTGTCTATTACAAGTTAA 2317
> AT5G46340.1 | Symbols: | O-acetyltransferase family protein
| chr5:18795926-18800094 REVERSE LENGTH=2238
Length=2238
Score = 387 bits (209), Expect = 3e-106
Identities = 932/1264 (74%), Gaps = 118/1264 (9%)
Strand=Plus/Plus
Query 557 TATACTTT-TACATATGTGACCGCACAG-A-TGTCTT-CA-ATTCATCAAAGAAGAGTTA 611
|||| ||| || || ||||||||||||| | || ||| | |||| | | |||| |||
Sbjct 604 TATA-TTTCTATATCTGTGACCGCACAGAATTG-CTTGGAGATTC-T--ACCAAGAATTA 658
Query 612 CAACCGGGATCTCTTT-CTGTTCCTTTAC-TTCCTTCTCATCATCGTTTCAGCGATAACT 669
|||||| || || ||| || || || ||| || ||||||||||| || ||||| || ||
Sbjct 659 CAACCGCGACCT-TTTCCTTTTTCTCTACGTT-CTTCTCATCATAGTATCAGCCATGACA 716
Query 670 TCGT-TCACG-ATACATAATGATAAATCA-CCAT-TCAGCGGAAAAG-CCA-TCATGTA- 722
|| | ||| | | ||| ||||| || ||| |||| || | || ||| ||| || | ||
Sbjct 717 TC-TCTCA-GAAAACACAATGACAAGTCACCCATATCTG-GG--AAGTCCATTC-TTTAC 770
Query 723 CTTGAATAGGCATCAAACCGAGGAGTGGAAAGGCTGGATGCAGGTCCTT-TTCTTGATGT 781
||| ||| | || ||||| || || |||||||| ||||||||||| || ||||| ||||
Sbjct 771 CTT-AATCGCCACCAAACTGAAGAATGGAAAGGATGGATGCAGGT-TTTGTTCTTAATGT 828
Query 782 ACCACTACTTTGCTGCTGCAGAG-TACTATAATGCGATCCGTGT-TTTCATTGCTTGC-T 838
| |||||||||||||| || ||| || || || || |||||| | ||| ||||| ||| |
Sbjct 829 ATCACTACTTTGCTGCGGCCGAGATA-TACAACGCAATCCGTATCTTT-ATTGC-TGCTT 885
Query 839 ATGTATGGATGACTGGATTTGGGAATTTTTCTTATTATTACAT-TC-GCAAGGACTTTAG 896
|||| ||||||||||| ||||| || || ||||| || | || || | ||||| |||
Sbjct 886 ATGTTTGGATGACTGGTTTTGGAAACTTCTCTTACTACT--ATGTCAGAAAGGA-TTT-C 941
Query 897 TC--TTCCAAGGTTTGCACAGATGATGTGGCGGCTAAATTTCCTGGTCATAG-TTTCCTG 953
|| || || | ||||| |||||||||||| |||| || ||| | || | | ||| |||
Sbjct 942 TCTGTTGCACGTTTTGCGCAGATGATGTGGAGGCTGAACTTCTTTGT-AGCGTTTTGCTG 1000
Query 954 CATCGTCCTCAACAACAG-TTACATGCTATACTACATCTGCCCAATGCACACTCTGTTT- 1011
|| || ||||||||| | || ||| |||||||||||||||||||||||||||| |||
Sbjct 1001 TATTGTTCTCAACAAC-GACTATATGTTATACTACATCTGCCCAATGCACACTCT-TTTC 1058
Query 1012 ACTCTGATGGTCTATGGAGCACTTGGCATTCTGAA-CAAGTATAATGAGATGGGTTCAGT 1070
|| || ||||| |||||||| || || || || | |||||| |||||||| || || ||
Sbjct 1059 ACCCTAATGGTATATGGAGCTCTGGGTAT-CTTCAGCAAGTACAATGAGATAGGATCGGT 1117
Query 1071 CATAGCTGCC-AA-ATTTTTTGCCTGCTTCGTTGTTGT-TATCATCGTT-TGGGAAATTC 1126
|| ||| | || || |||| | |||||| | ||||| | | | ||| ||||||||||
Sbjct 1118 GATGGCT-CTGAAGATATTTT-CATGCTTCCTCGTTGTCTTTT-T-GTTGTGGGAAATTC 1173
Query 1127 CGGGCGTTTTTGAA-TGGATTT-GGAGTCCTTTTACACTCCTAATGGGTTACAATGATCC 1184
| || | ||||||| | |||| || |||| || ||| | | | ||||||||||| ||
Sbjct 1174 CTGGAGCTTTTGAAAT--ATTTTGGGGTCCCTTAACATTTTTGCTAGGTTACAATGA-CC 1230
Query 1185 C-GCAAAACCAC-AGCTTCCCCT-CTTGCATGAGTGGCA-TTTCCGCTCTGGCCTTGATC 1240
| || || || | | |||| | || |||||| ||||| ||| | || ||||||||||
Sbjct 1231 CTGCCAAGCC-CGATCTTCATCGGCT-GCATGAATGGCACTTTA-GATCAGGCCTTGATC 1287
Query 1241 GGTACATATGGATAATCGGGATGCTATATGCATACTACCACCCAACTGTTGAAAGTTGGA 1300
| ||||||||||| ||||| ||| | ||||| || || ||||||||||| || || ||||
Sbjct 1288 GCTACATATGGATCATCGGAATGATTTATGCCTATTATCACCCAACTGTAGAGAGATGGA 1347
Query 1301 TGGATAAACTGGAGGAA-GCTGAGATGAAGTTCAGGATGGCTATCAAAACAACTGTGGC- 1358
|||| || | ||||| | ||| | |||| || | ||||| | | || | ||
Sbjct 1348 TGGAGAAGTTAGAGGACTG-TGAAACGAAGAAAAG-A---CTATCCATA-AAG-GCCGCT 1400
Query 1359 ACTGATAGC-ACTAAC-G-G-T-G--GGATATTTTTGGTACGAGTACATATACAAGCTGG 1411
| || || | | || | | | | | || ||| | ||||| || | || ||||||||||
Sbjct 1401 ATTGTTA-CTATTA-CTGTGCTTGTTGGCTATGTGTGGTATGAATGTATCTACAAGCTGG 1458
Query 1412 ACAAG-CTAACTTACAACAAATATCATCCTTACACCTCTTGGATTCCAATAACTGTTTAT 1470
||| | | | |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct 1459 ACAGGACCAG-TTACAACATGTATCATCCGTACACATCATGGATCCCCATCACTGTTTAC 1517
Query 1471 ATTTGTCTCCGGAACATCACCCA---GTCTTTCCGC-G-G-CTACAGTTTAAC-C-CTTC 1522
|| || || ||||| ||||||| | ||| | | | | || || || | | | |||
Sbjct 1518 ATATGCCTTCGGAATTTCACCCACCAG-CTT-C-GAAGTGTCT-CA-TTGA-CTCTCTT- 1570
Query 1523 TGGCGTGGCTTGGGAAGATAACACTGGAGACATATATCTCCCAGTTTCATATATGGCTCA 1582
|| |||||||||| ||||| || | ||||| || || |||||||||||||||||||| |
Sbjct 1571 TG-CGTGGCTTGGCAAGATCACTTTAGAGACTTACATTTCCCAGTTTCATATATGGCTAA 1629
Query 1583 GATCTGGAGTT-CCTGATGGTCAACCCAAATTACTACTATCTCTTATCCCGG-AGTACCC 1640
|||| | | ||||| || ||||| |||| || || ||| |||| |||| | |||||
Sbjct 1630 GATCAA-ACATGCCTGACGGGCAACCAAAATGGCTTCTCTCTATTATTCCGGGA-TACCC 1687
Query 1641 -ATTGTTGAACTTCATGCTCACTACTTCGATTTACGTCGCTA-TCTCTTATAGGCTCTTT 1698
|| | | || |||||||| || ||| | || |||||| || | ||| | | ||||||
Sbjct 1688 TAT-GCTCAATTTCATGCTGACAACTGCTATATACGTC-CTTGTATCTCACCGTCTCTTT 1745
Query 1699 GAGCTTACCAACACTTTGAAAACAGCCTTCATACCAACAAAAGACGACAAACG-C-CTTG 1756
|| || |||||||| | || || | ||| |||| ||||||||| |||| || | |||
Sbjct 1746 GAACTAACCAACACACTCAAGACGGTTTTCGTACCCACAAAAGACAACAAGCGACTCTTC 1805
Query 1757 TCTA 1760
||||
Sbjct 1806 TCTA 1809
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101354900355
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5