BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477972
Length=2278
Score E
Sequences producing significant alignments: (Bits) Value
AT3G06640.1 | Symbols: | PAS domain-containing protein tyrosin... 3109 0.0
AT3G06620.1 | Symbols: | PAS domain-containing protein tyrosin... 2281 0.0
AT3G06630.1 | Symbols: | protein kinase family protein | chr3:... 1602 0.0
AT1G67890.1 | Symbols: | PAS domain-containing protein tyrosin... 1245 0.0
AT5G49470.2 | Symbols: | PAS domain-containing protein tyrosin... 798 0.0
AT1G18230.1 | Symbols: | pseudogene, putative protein kinase |... 76.8 8e-13
> AT3G06640.1 | Symbols: | PAS domain-containing protein tyrosine
kinase family protein | chr3:2074189-2078317 REVERSE LENGTH=2374
Length=2374
Score = 3109 bits (1683), Expect = 0.0
Identities = 2006/2157 (93%), Gaps = 42/2157 (2%)
Strand=Plus/Plus
Query 1 ATGGTTAAGCTTCTTCAAGGTCCGCTTCCACCTAGCAAGGAGCTGCTGAAGAAGATGATA 60
||||||||||||||||||| ||| || |||||| |||||||||||||||||||||||||
Sbjct 1 ATGGTTAAGCTTCTTCAAGACCCGATTACACCTAACAAGGAGCTGCTGAAGAAGATGATA 60
Query 61 GAGCTAGAGCAAAGTCAGGAGCATCTAATGCAGGAGATGTCTCGGCTCAAGGTATCCACG 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 61 GAGCTAGAGAAAAGTCAGGAGCATCTAATGCAGGAGATGTCTCGGCTCAAGGTCTCCACG 120
Query 121 GAGCTTAGGAAGGAGATCCGTATACAGGGTTCCATGAATTTGAGACCATCGCCCTGGAAG 180
|||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct 121 GAGCTTCGGAAGGAGAGCCGTATCCAGTGTTCCATGAATCTGAGACCATCGCCCTGGAAG 180
Query 181 TTCACTGATAAACAGTATCTCAATATTTTGCAGTCCATGGCACAATCTGTTCATGCCTTC 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TTCACTCATAAACAGTATCTCAATATTTTGCAGTCCATGGCACAATCTGTTCATGCCTTC 240
Query 241 GATCTCAATATGCGAATTATCTTTTGGAATGCTATGGCGGAAAAGGTTTATGGGTACTCT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GATCTCAATATGCGAATTATCTTTTGGAATGCTATGGCGGAAAAGGTTTATGGGTACTCT 300
Query 301 GCTGCAGAAGCAGTTGGGCAGAACCCAATTGACGTAATGGTAGATGATCGGGATGCCCCC 360
||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||
Sbjct 301 GCTGCAGAAGCAGTTGGACAGAACCCTATTGACGTTATGGTAGATGATCGGGATGCTCCC 360
Query 361 TTTGCAATGAATATTGCTCAACTTTGTTCCAATGGAGAGACCTGGACTGGCAAGTTTCCT 420
||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 361 TTTGCCATGACTATTGCTCAACTTTGTTCCAATGGAGAGAGCTGGACTGGCAAGTTTCCT 420
Query 421 GTCAAGAGCAGAACTGGAGAGAAATTTTCAGTTGTCACTACATGTTCCCCCTTCTATGCT 480
|||||| ||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||
Sbjct 421 GTCAAGCGCAGAACAGGAGAGAAATTCTCAGCTGTCACTACGTGTTCCCCCTTCTATGCT 480
Query 481 GATGACGGTTCCCTTATTGGGATCGTTTCTGTCACAAGTGACGTAGCA-CAGTATCTCAA 539
||||||||||| |||||||||||||||||| ||||||||||||||||| || ||||| ||
Sbjct 481 GATGACGGTTCTCTTATTGGGATCGTTTCTATCACAAGTGACGTAGCACCA-TATCTGAA 539
Query 540 CCCGAGAATCTCTTTGGCTACATTAAAGGCGTCAGAAGTTGAAACGAGCTCAAGCCCTGC 599
||| | |||||||||||||| ||||||||| |||||||| ||||| ||||| | ||||||
Sbjct 540 CCCAACAATCTCTTTGGCTAAATTAAAGGCTTCAGAAGTCGAAACCAGCTCTACCCCTGC 599
Query 600 AAGCAATAGTTTTGCCTTTAAACTTGGTTTGGACTCCAAAAGAGCTGTTGTATCCAAATT 659
||| ||||||||||||||||||||||| |||||| ||||| ||||||||||||| ||| |
Sbjct 600 AAGGAATAGTTTTGCCTTTAAACTTGGGTTGGACACCAAAGGAGCTGTTGTATCGAAACT 659
Query 660 TGGCCTTGATTCTGATCAGCCTATACAAGTTGCTATAGCTTCAAAGATATCAGATTTGGC 719
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 660 TGGCCTTGATTCTGATCAGCCTATACAAGTTGCTATAGCATCAAAGATATCTGATTTGGC 719
Query 720 ATCTAAGGTGAGAAACAAGGTCAGGTCGAAAATGCCAGCAGGTGATAGTAGTGTCACAGT 779
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 ATCCAAGGTGAGAAACAAGGTCAGGTCGAAAATGCCAGCAGGTGATAGTAGTGTCACAGT 779
Query 780 GTCTGAGGGTGGCAGTGGGGATAGTCATCATTCAGATCATGGTGTCTTCGGTGCTACTCT 839
| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 780 ATTTGAGGGTGAAACTGGGGATAGTCATCATTCAGATCATGGAGTCTTCGGTGCTACTCT 839
Query 840 CTCTGACCACA-GG--GA--C-G-----A----TGC-AG--CACCAAGAGGGGATTTTAT 881
||||||||||| || || | | | ||| || ||||||||||||| |||||
Sbjct 840 CTCTGACCACATGGATGATGCAGCATCAAGTGGTGCTAGCACACCAAGAGGGGACTTTAT 899
Query 882 CCAGTCTCCTTTTGGTGTATTCACATGTAACGATGACAAG-TTTGTTTCGAAACCCTTCA 940
||| |||||||||||||||||||||||||||||||||||| ||| || || |||||||||
Sbjct 900 CCAATCTCCTTTTGGTGTATTCACATGTAACGATGACAAGTTTTCTTCCG-AACCCTTCA 958
Query 941 AAGATTCCAGTGATGGAAAGCCTGTAACCCTTTTCACCTCAAAAGCTGAAGAATGGATGG 1000
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct 959 TAGATTCCAGTGATGGATATCCTATAACCCTTTTCACCTCAAAAGCTGAAGAATGGATGG 1018
Query 1001 TAAAGAAAGGTTTGTCGTT-GCCATGGAAAGGGACTGAGCAGGAAGGTTCAAGAGTAAAG 1059
|||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||
Sbjct 1019 TAAAGAAAGGTTTGTC-TTGGCCATGGAAAGGGAATGAGCAGGAAGGTTCAAGAGTAAAG 1077
Query 1060 CCTTCTCATTCTGTATGGCCTTGTGTACAGAATGaaaaaaaGAAAGATAAGTCTCACCAG 1119
||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1078 CCTACTTATTCTGTATGGCCTTGTGTACAGAATGAACAAAAGAAAGATAAGTCTCACCAG 1137
Query 1120 ATCAATCC-CTCTTCTGGTGTTAAGTCTAAAAGCCATGCCTCTGAAAGTAATAAGCCTAC 1178
||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 ATCAA-CCGCTATTCTGGTGTTAAGTCTAAAAGCCATGCCTCTGAAAGTAATAAGCCTAC 1196
Query 1179 CAATAACAAGGCTTCTAGTTCGCGGTCTGCCTATATATATGTGAACAGCACAAGCAGCCC 1238
|||||||||||||||| ||| ||||||| || | |||| || || || |||| |
Sbjct 1197 CAATAACAAGGCTTCTGGTTTGCGGTCT-TCT-TGTATA----AA-TGC-GAA-CAGCGC 1247
Query 1239 TAGTAGCCGTAAAACTATCAGCT-ACAGTGTTATGAGCAAGGTGGATACATATAGTAATT 1297
|| ||||||| || |||||| | ||||| ||||| ||||||||||||| |||||||||
Sbjct 1248 TATTAGCCGTGGAATTATCAG-TCACAGTACTATGAACAAGGTGGATACAAATAGTAATT 1306
Query 1298 GCTTGGAGTATGAAATTTTATGGGATGATTTGACAATCGGAGAACAAATTGGACAAGGCT 1357
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1307 GCTTGGAGTATGAAATTTTGTGGGATGATTTGACAATCGGAGAACAAATCGGACAAGGCT 1366
Query 1358 CATGTGGAACTGTCTATCACGGTCTGTGGTTTGGATCTGATGTAGCTGTAAAAGTGATCC 1417
||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 1367 CATGTGGAACTGTCTATCACGGTCTTTGGTTTGGATCTGATGTAGCTGTAAAATTGATCT 1426
Query 1418 CCAAACAAGAATATTCAGAAGAGGTCATACAATCATTTAGACAAGAGGTATCGCTGATGA 1477
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 1427 CCAAACAAGAATATTCAGAAGAGGTCATACAATCTTTTAGACAAGAGGTATCGTTGATGC 1486
Query 1478 AAAGACTCAGGCATCCTAACGTTCTGCTGTTTATGGGAGCAGTGACTTTACCTCAGGGTC 1537
||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1487 AAAGACTTAGACATCCTAACGTTCTGCTGTTTATGGGAGCTGTGACTTTACCTCAGGGTC 1546
Query 1538 TCTGTATAGTGTCAGAATTCCTTCCACGTGGAAGTCT-CTTCAGTCTACTGCAGAGAAGT 1596
|||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| |
Sbjct 1547 TCTGTATAGTGTCAGAGTTCCTTCCACGTGGAAGTCTATTTC-GTCTACTGCAGAGAAAT 1605
Query 1597 ATGTCAAAACTTGATTGGAGGCGGCGTATCAATATGGCCTTGGACATTGCTCGCAGTATG 1656
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1606 ATGTCAAAACTTGATTGGAGGCGGCGTATCAATATGGCCTTGGACATTGCTCGCGGCATG 1665
Query 1657 AATTGTCTTCACCGCTGTAGTCCACCCATCATCATCCATCGTGATTTGAAGTCGTCAAAT 1716
|||| |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||
Sbjct 1666 AATTATCTTCACCGCTGTAGTCC-CCC--CATCATCCATCGTGATTTGAAGTCATCAAAT 1722
Query 1717 CTGCTGGTAGACAAGAACTTGACCGTTAAGGTAGCTGACTTTGGTCTATCGCGTATCAAG 1776
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1723 CTGCTGGTAGACAAGAACTTGACCGTTAAGGTAGCTGACTTTGGTCTATCGCGTATTAAG 1782
Query 1777 CATCAGACATACCTAACCAGCAAGTCGGGAAAGGGAATGCCTCAATGGATGGCACCAGAA 1836
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1783 CATCATACATACCTAACCAGCAAGTCGGGAAAGGGAATGCCTCAATGGATGGCACCAGAA 1842
Query 1837 GTTCTTCGAAATGAGTCTGCTGATGAGAAGTCTGACATTTACAGCTTTGGAGTAGTACTA 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1843 GTTCTTCGAAATGAGTCTGCTGATGAGAAGTCTGACATTTACAGCTTTGGAGTAGTACTA 1902
Query 1897 TGGGAGCTTGCCACAGAGAAGATCCCATGGGAAAATTTCAATTCGATGCAGGTGATCGGA 1956
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 1903 TGGGAGCTTGCCACAGAGAAGATCCCATGGGAAAATCTCAACTCGATGCAGGTGATCGGA 1962
Query 1957 GCTGTGGGGTTCATGAACCAGAGGCTGGAAATTCCAAAGGACATTGATCCTGATTGGATC 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1963 GCTGTGGGGTTCATGAACCAGAGGCTGGAAATTCCAAAGGACATTGATCCTGATTGGATC 2022
Query 2017 TCATTAATAGAGAGCTGCTGGCACAGCGATACAAAGCTTAGACCCACATTCCAAGAACTG 2076
||| ||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||
Sbjct 2023 TCACTAATAGAGAGCTGTTGGCACAGGGATGCAAAGCTGAGACCCACATTCCAAGAACTG 2082
Query 2077 ATGGAGAAACTAAGAGATCTGCAAAGAAAGTATACAATACAGTTCCAAGCGATTCGT 2133
||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 2083 ATGGAGAGACTAAGAGACCTGCAAAGAAAGTATACAATACAGTTCCAAGCGACTCGT 2139
> AT3G06620.1 | Symbols: | PAS domain-containing protein tyrosine
kinase family protein | chr3:2062206-2067416 REVERSE LENGTH=3227
Length=3227
Score = 2281 bits (1235), Expect = 0.0
Identities = 1770/2022 (88%), Gaps = 61/2022 (3%)
Strand=Plus/Plus
Query 176 GGAAGTTCACTGATAAACAGTATCTCAATATTTTGCAGTCCATGGCACAATCTGTTCATG 235
|||| |||||||||||||||||| | |||||||||||||| ||||||||| |||||||||
Sbjct 571 GGAAATTCACTGATAAACAGTATTTGAATATTTTGCAGTCGATGGCACAAGCTGTTCATG 630
Query 236 CCTTCGATCTCAATATGCGAATTATCTTTTGGAATGCTATGGCGGAAAAGGTTTATGGGT 295
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 631 CCTTCGATCTTAATATGCGGATTATCTTTTGGAATGCTATGGCGGAAAAGGTTTATGGGT 690
Query 296 ACTCTGCTGCAGAAGCAGTTGGGCAGAACCCAATTGACGTAATGGTAGATGATCGGGATG 355
||||||| ||||||||| ||||| ||||||| ||| | || || | |||||||||||| |
Sbjct 691 ACTCTGCAGCAGAAGCACTTGGGGAGAACCCTATTAATGTTATTGCAGATGATCGGGACG 750
Query 356 CCCCCTTTGCAATGAATATTGCTCAACTTTGT-TCCAATGGAGAGACCTGGACTGGCAAG 414
| ||||||||||||||||||||| || |||| ||| |||||||| ||||||||| ||
Sbjct 751 CTGCCTTTGCAATGAATATTGCTCGACGTTGTGTCC-GTGGAGAGAGCTGGACTGGTGAG 809
Query 415 TTTCCTGTCAAGAGCAGAA-CTGGAGAGAAATTTTCAGTTGTCACTACATGTTCCCCCTT 473
|||||||| ||||||| || | || || | |||||||| ||||||||| |||||||| ||
Sbjct 810 TTTCCTGTTAAGAGCA-AATCAGGGGATAGATTTTCAGCTGTCACTACCTGTTCCCCTTT 868
Query 474 CTATGCTGATGACGGTTCCCTTATTGGGATCGTTTCTGTCACAAGTGACGTAGCACAGTA 533
||||| |||||| ||| | ||||| |||||| ||| | |||| ||| || |||| |||
Sbjct 869 CTATGATGATGATGGTGCTCTTATGGGGATCATTTGTATCACCAGTAACACGGCACCGTA 928
Query 534 TCTCAACCCGAGAATCTCTTTGGCTACATTAAAGGCGTC----AGAAGTTGAAACGAGCT 589
||| ||||| |||||||||||||||| ||| |||||| | ||||| |||||||||||
Sbjct 929 TCTGAACCCAAGAATCTCTTTGGCTAAATTGAAGGCG-CAAGAAGAAGGTGAAACGAGCT 987
Query 590 CAAGCCCTGCAAGCAATAGTTTTGCCTTTAAACTTGGTTTGGACTCCAAAAGAGCTGTTG 649
| | ||||||||| ||||||||||||| ||||||||| ||||| |||| | ||||||||
Sbjct 988 CTATCCCTGCAAGGAATAGTTTTGCCTCTAAACTTGGCTTGGATTCCAGAGGAGCTGTTA 1047
Query 650 TATCCAAATTTGGCCTTGATTCTGATCAGCCTATACAAGTTGCTATAGCTTCAAAGATAT 709
|||| ||| |||||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct 1048 TATCGAAACTTGGCCTTGACTCTGATCAGCCTATACAAGTTGCTATAGCATCAAAGATCT 1107
Query 710 CAGATTTGGCATCTAAGGTGAGAAACAAGGTCAGGTCGAAAATGCCAGCAGGTGATAGTA 769
||||||||||||| ||||| || |||||||||||||||||||||| ||||||||||| ||
Sbjct 1108 CAGATTTGGCATCCAAGGTCAGCAACAAGGTCAGGTCGAAAATGCGAGCAGGTGATAATA 1167
Query 770 GTGTCACAGTGTCTGAGGGTGGCAGTGGGGATAGTCATCATTCAGATCATGGTGTCTTCG 829
||| |||| | || |||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 1168 GTGCCACACTCTCGGAGGGTGGCAGTGGGGATAGTCATCAAAAAGATCATAATGTCTTCG 1227
Query 830 GTGCTACTC-TCTCTGACCACA-GG--GA--C-G-----A----TG-CAG--CACCAAGA 870
||||||||| | | |||||||| || || | | | || ||| ||||||||
Sbjct 1228 GTGCTACTCTTGT-TGACCACAGGGACGATGCAGCATCAAGTGGTGCCAGCACACCAAGA 1286
Query 871 GGGGATTTTATCCAGTCTCCTTTTGGTGTATTCACATGTAACGATGACAAGTTTGTTTCG 930
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1287 GGGGATTTTATCCAGTCTCCTTTTGGTGTATTCACATGTAATGATGAGAAGTTTGTTTCG 1346
Query 931 AAACCCTTCAAAGATTCC---------AGTGATGGAAAGCCTGTAA-CCCT----TT-TC 975
|||||||||||||||||| |||||||||||||||| || || | || ||
Sbjct 1347 AAACCCTTCAAAGATTCCAGTGATGAGAGTGATGGAAAGCCTGCAATCCATAAGGTTCTC 1406
Query 976 ACCTCAAAAGCTGAAGAATGGATGGTAAAGAAAGGTTTGTCGTTGCCATGGAAAGGGACT 1035
||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |
Sbjct 1407 ACCTCAAAAGCTGAAGAGTGGATGGTAAAGAAAGGTTTGTCATGGCCATGGAAAGGGAAT 1466
Query 1036 GAGCAGGAAGGTTCAAGAGTAAAG-CCTTCTCATTCTGTATGGCCTTGTGTACAGAATGa 1094
|||||||||||||||| || ||| ||| | ||||||| |||||||| |||||||||||
Sbjct 1467 GAGCAGGAAGGTTCAAAAG-GAAGACCTACAAATTCTGTTTGGCCTTGGGTACAGAATGA 1525
Query 1095 aaaaaaGAAAGATAAGTCTCACCAGATCAATCCCTCTTCTGGTGTTAAGTCTAAAAGCCA 1154
| |||||||||| | || ||||||||| ||||||||| |||||||| ||| | |||||||
Sbjct 1526 ACAAAAGAAAGAGAGGTGTCACCAGATTAATCCCTCTGCTGGTGTTCAGTATGAAAGCCA 1585
Query 1155 TGCCTCTGAAAGTAATAAGCCTACCAATAACAAGGCTTCTAGTTCGCGGTCTGCCTATAT 1214
||||| ||||||||||||||||| |||||| |||||||||||| | ||||| || |||
Sbjct 1586 TGCCTTTGAAAGTAATAAGCCTATCAATAATGAGGCTTCTAGTTTGTGGTCTTCCCCTAT 1645
Query 1215 ATATGTGAACAGCACAAGCAGCCCTAGTAGCCGTAAAACTATCAGCTA-CAGTGTTATGA 1273
| ||| ||||| ||||||||| |||||||| | || || |||| | |||||||||||
Sbjct 1646 AAATGCAAACAGTACAAGCAGCGCTAGTAGCTGCGGAAGTACCAGC-AGCAGTGTTATGA 1704
Query 1274 GCAAGGTGGATACAT-ATAG-TAATTGCTTGGAGTATGAAATTTTATGGGATGATTTGAC 1331
|||||| ||||| | |||| || ||||||| ||||||||||||||||||||||||||
Sbjct 1705 ACAAGGTTGATAC-TGATAGCGAA-GGCTTGGAATATGAAATTTTATGGGATGATTTGAC 1762
Query 1332 AATCGGAGAACAAATTGGACAAGGCTCATGTGGAACTGTCTATCACGGTCTGTGGTTTGG 1391
||| ||||||||| | |||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 1763 AATTGGAGAACAAGTCGGACAAGGTTCATGTGGAACTGTTTATCACGGTCTCTGGTTTGG 1822
Query 1392 ATCTGATGTAGCTGTAAAAGTGATCCCCAAACAAGAATATTCAGAAGAGGTCATACAATC 1451
|||||||||||||||||||||| || |||||||||||||||||| |||||||||| ||||
Sbjct 1823 ATCTGATGTAGCTGTAAAAGTGTTCTCCAAACAAGAATATTCAGCAGAGGTCATAGAATC 1882
Query 1452 ATTTAGACAAGAGGTATCGCTGATGAAAAGACTCAGGCATCCTAACGTTCTGCTGTTTAT 1511
|||| ||||||||||| | ||||||||||||| || || |||||||| |||||||||||
Sbjct 1883 TTTTAAACAAGAGGTATTGTTGATGAAAAGACTTAGACACCCTAACGTCCTGCTGTTTAT 1942
Query 1512 GGGAGCAGTGACTTTACCTCAGGGTCTCTGTATAGTGTCAGAATTCCTTCCACGTGGAAG 1571
|||||| ||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||
Sbjct 1943 GGGAGCTGTGACTTCACCCCAGCGTCTCTGTATAGTGTCAGAGTTCCTTCCACGTGGAAG 2002
Query 1572 TCTCTTCAGTCTACTGCAG-AGAAGTATGTCAAAACTTGATTGGAGGCGGCGTATCAATA 1630
||||||| ||||||| ||| || || | ||||||||| |||||||||||||||||| |||
Sbjct 2003 TCTCTTCCGTCTACTACAGAAG-AGCACGTCAAAACTGGATTGGAGGCGGCGTATCCATA 2061
Query 1631 TGGCCTTGGACATTGCTCGCAGTATGAATTGTCTTCACCGCTGTAGTCCACCCATCATCA 1690
|||||||||||||||||||| ||||||||| |||||||| |||||||||||||| | |
Sbjct 2062 TGGCCTTGGACATTGCTCGCGGTATGAATTATCTTCACCATTGTAGTCCACCCAT--T-A 2118
Query 1691 TCCATCGTGATTTGAAGTCGTCAAATCTGCTGGTAGACAAGAACTTGACCGTTAAGGTAG 1750
||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 2119 TCCATCGTGATCTGAAGTCATCAAATCTGCTGGTAGACAAGAACTGGACCGTTAAGGTAG 2178
Query 1751 CTGACTTTGGTCTATCGCGTATCAAGCATCAGACATACCTAACCAGCAAGTC-GGGAAAG 1809
||||||||||||| ||||||||||||||| | |||||||||||||||||||| ||| |||
Sbjct 2179 CTGACTTTGGTCTCTCGCGTATCAAGCATGAAACATACCTAACCAGCAAGTCTGGG-AAG 2237
Query 1810 GGAATGCCTCAATGGATGGCACCAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAGTCT 1869
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2238 GGAACGCCTCAATGGATGGCACCAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAATCT 2297
Query 1870 GACATTTACAGCTTTGGAGTAGTACTATGGGAGCTTGCCACAGAGAAGATCCCATGGGAA 1929
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 2298 GACATTTACAGCTTTGGAGTAGTATTATGGGAGCTTGCCACCGAGAAGATCCCATGGGAA 2357
Query 1930 AATTTCAATTCGATGCAGGTGATCGGAGCTGTGGGGTTCATGAACCAGAGGCTGGAAATT 1989
| | |||| || ||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 2358 ACTCTCAACTCTATGCAGGTGATTGGAGCTGTGGGGTTCATGGACCAGAGGCTGGAAATC 2417
Query 1990 CCAAAGGACATTGATCCT-GATTGGATCTCATTAATAGAGAGCTGCTGGCACAGCGATAC 2048
||||| |||||||||||| | ||||||||||||||| |||||||| |||||||| |||||
Sbjct 2418 CCAAAAGACATTGATCCTCG-TTGGATCTCATTAATGGAGAGCTGTTGGCACAGTGATAC 2476
Query 2049 AAAGCTTAGACCCACATTCCAAGAACTGATGGAGAAACTAAGAGATCTGCAAAGAAAGTA 2108
|||||| |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct 2477 AAAGCTGAGACCCACATTCCAAGAACTGATGGATAAATTAAGAGACCTGCAAAGAAAGTA 2536
Query 2109 TACAATACAGTTCCAAGCGATTCGTGCTGCGTTATCTGACAA 2150
|| |||||||||||||||| |||||||||||||||||||||
Sbjct 2537 TATGATACAGTTCCAAGCGACTCGTGCTGCGTTATCTGACAA 2578
> AT3G06630.1 | Symbols: | protein kinase family protein | chr3:2070388-2073800
REVERSE LENGTH=2025
Length=2025
Score = 1602 bits (867), Expect = 0.0
Identities = 1274/1460 (87%), Gaps = 69/1460 (5%)
Strand=Plus/Plus
Query 619 AAACTTGGTTTGGACTCCAAAAGAGCTGTTGTATCCAAATTTGGCCTTGATTCTGATCAG 678
||||||||||||||||||||| |||||||| |||| ||| |||||| || |||||||||
Sbjct 595 AAACTTGGTTTGGACTCCAAAGGAGCTGTTATATCGAAACCTGGCCTCGACTCTGATCAG 654
Query 679 CCTATACAAGTTGCTATAGCTTCAAAGATATC-AGATTTGGCATCTAAGGTGAGAAACAA 737
|||||||||||| ||||||| ||||||||||| || ||||||||| ||| |||| |||||
Sbjct 655 CCTATACAAGTTTCTATAGCATCAAAGATATCAAG-TTTGGCATCCAAGTTGAGCAACAA 713
Query 738 GGTCAGGTCGAAAATGCCAGCAGGTGATAGTAGTGTCACAGTGTCTGAGGGTGGCAGTGG 797
|||||||| ||||||| |||||||| | || |||||| | | ||||
Sbjct 714 AGTCAGGTCAAAAATGCGAGCAGGTG--A-TA-----ACAGTG-C---------CTGTGG 755
Query 798 GGATAGTCATCATTCAGATCATGGTGTCTTCGGTGCTACTCTCTCTGACCACA--G--G- 852
||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| | |
Sbjct 756 GGATAGTCATCATTCAGATCATGATGTATTCGGTGATACTCTCTCTGACCACAGGGACGA 815
Query 853 -G-A-CG---A----TGC-AG--CACCAAGAGGGGATTTTATCCAGTCTCCTTTTGGTGT 899
| | || | ||| || |||||||||||||||||||||| ||||||||||||||
Sbjct 816 CGCAGCGTCAAGTGGTGCTAGCACACCAAGAGGGGATTTTATCCAATCTCCTTTTGGTGT 875
Query 900 ATTCACATGTAACGATGACAAGTTTGTTTCGAAACCCTTCAAAGATTCCAGTGATGGAAA 959
||||||||| |||||||||||||| ||| ||||||| |||||||||||||||| ||||
Sbjct 876 TTTCACATGTTACGATGACAAGTTTCCTTCAAAACCCTCCAAAGATTCCAGTGATAGAAA 935
Query 960 GCCTGTAA-CCCT----TT-TCACCTCAAAAGCTGAAGAATGGATGGTAAAGAAAGGTTT 1013
||||| || || | || |||||||||||||||||||||||||||||||||||||||
Sbjct 936 GCCTGCAATCCATAAGGTTCCCACCTCAAAAGCTGAAGAATGGATGGTAAAGAAAGGTTT 995
Query 1014 GT--CGTTGCCATGGAAAGGGACTGAGCAGGAAGGTTCAAGAGTAAAGCCTTCTCATTCT 1071
|| || | ||||||||||||| |||||| |||||||||||||||| |||| ||||||||
Sbjct 996 GTCACG-T-CCATGGAAAGGGAATGAGCAAGAAGGTTCAAGAGTAAGGCCTACTCATTCT 1053
Query 1072 GTATGGCCTTGTGTACAGAATGaaaaaaaGAAAGATAAGT-CTCACCAGATCAATCCCTC 1130
|||||| |||| ||| | |||||| || |||||||||||| | |||||||| |||||||
Sbjct 1054 GTATGGTCTTGGGTAGAAAATGAACAAGAGAAAGATAAGTAC-CACCAGATTTATCCCTC 1112
Query 1131 TTCTGGTGTTAAGTCTAAAAGCCATGCCTCTGAAAGTAATAAGCCTACCAATAAC-AAGG 1189
| |||||||||||||| ||||||||| ||||||||||||||||||||| || || || |
Sbjct 1113 TGCTGGTGTTAAGTCTGAAAGCCATGGCTCTGAAAGTAATAAGCCTACTGATGACGAA-G 1171
Query 1190 CTTCTAGT-TCGCGGTCTGCCTATATATATGTGAACAGCACAAGCAGCCCTAGTAGCCGT 1248
|||||| | | | ||||| ||| |||| ||| |||||||||| |||| ||||||| |
Sbjct 1172 CTTCTAATAT-GTGGTCTTCCTCTATAAATGCAAACAGCACAAACAGCGCTAGTAGTTGC 1230
Query 1249 AAAACTATCAGCTA-CAGTGTTAT-GAGCAAGGTGGATACATATAGTAATTGCTTGGAGT 1306
| || ||| || |||||||| || |||||| |||| | |||| || ||||||
Sbjct 1231 GGCAGTACCAG-TAGGAGTGTTATGGA-CAAGGTTGATATAGATAGCGATCCCTTGGAAC 1288
Query 1307 ATGAAATTTTATGGGATGATTTGACAATCGGAGAACAAATTGGACAAGGCTCATGTGGAA 1366
||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct 1289 ATGAAATTTTATGGGATGATTTGACAATCGGGGAACAAATTGGACGAGGTTCATGTGGAA 1348
Query 1367 CTGTCTATCACGGTCTGTGGTTTGGATCTGATGTAGCTGTAAAAGTGATCCCCAAACAAG 1426
|||||||||||||| | ||||||||||||||||||||||| |||||| || |||||||||
Sbjct 1349 CTGTCTATCACGGTATCTGGTTTGGATCTGATGTAGCTGTGAAAGTGTTCTCCAAACAAG 1408
Query 1427 AATATTCAGAA-GAGGTCATACAA-TCATTTAG-ACAAGAGGTATCGCTGATGAAAAGAC 1483
||||||||||| | |||||| || || ||| | | ||||||||||||||||||||||||
Sbjct 1409 AATATTCAGAATCA-GTCATA-AAGTC-TTTTGAAAAAGAGGTATCGCTGATGAAAAGAC 1465
Query 1484 -TCAGGCATCCTAACGTTCTGCTGTTTATGGGAGCAGTGACTTTACCTCAGGGTCTCTGT 1542
|| | ||||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||
Sbjct 1466 TTC-GACATCCTAACGTTCTGCTGTTTATGGGAGCTGTGACTTCACCCCAGCGTCTCTGT 1524
Query 1543 ATAGTGTCAGAATTCCTTCCACGTGGAAGTCTCTTCAGTCTACTGCAGAGAAGTATGTCA 1602
||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1525 ATAGTGTCAGAGTTCGTTCCACGTGGAAGTCTCTTCCGTCTACTGCAGAGAAGTATGTCG 1584
Query 1603 AAACTTGATTGGAGGCGGCGTATCAATATGGCCTTGGACATTGCTCGCAGTATGAATTGT 1662
||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| |
Sbjct 1585 AAACTTGATTGGAGGCGACGTATCAACATGGCCTTGGACATTGCTCGCGGTATGAATTAT 1644
Query 1663 CTTCACCGCTGTAGTCCACCCATCATCATCCATCGTGATTTGAAGTCGTCAAATCTGCTG 1722
|||||| | ||||||||| || ||||||||| |||||| |||||||||||||| |||||
Sbjct 1645 CTTCACTGTTGTAGTCCA-CC--CATCATCCACCGTGATCTGAAGTCGTCAAATTTGCTG 1701
Query 1723 GTAGACAAGAACTTGACCGTTAAGGTAGCTGACTTTGGTCTATCGCGTATCAAGCATCAG 1782
||||||| ||||| ||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1702 GTAGACAGGAACTGGACCGTTAAGGTAGCTGACTTTGGTCTTTCGCGTATTAAGCATCAG 1761
Query 1783 ACATACCTAACCAGCAAGTCGGGAAAGGGAATGCCTCAATGGATGGCACCAGAAGTTCTT 1842
||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 1762 ACATACCTAACTAGCAAGTCGGGAAAGGGAACGCCTCAATGGATGGCACCTGAAGTTCTT 1821
Query 1843 CGAAATGAGTCTGCTGATGAGAAGTCTGACATTTACAGCTTTGGAGTAGTACTATGGGAG 1902
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 1822 CGAAATGAGTCTGCTGATGAGAAGTCTGACATTTATAGCTTTGGAGTAGTATTATGGGAG 1881
Query 1903 CTTGCCACAGAGAAGATCCCATGGGAAAATTTCAATTCGATGCAGGTGATCGGAGCTGTG 1962
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 1882 CTTGCCACAGAGAAGATCCCATGGGAAAATCTCAACTCGATGCAGGTGATCGGAGCTGTG 1941
Query 1963 GGGTTCATGAACCAGAGGCTGGAAATTCCAAAGGACATTGATCCTGATTGGATCTCATTA 2022
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1942 GGGTTCATGAACCAGAGGCTGGAAATTCCAAAGGACACTGATCCTGATTGGATCTCATTA 2001
Query 2023 ATAGAGAGCTGCTGGCACAG 2042
||||||||||| ||||||||
Sbjct 2002 ATAGAGAGCTGTTGGCACAG 2021
> AT1G67890.1 | Symbols: | PAS domain-containing protein tyrosine
kinase family protein | chr1:25457179-25462792 FORWARD LENGTH=2820
Length=2820
Score = 1245 bits (674), Expect = 0.0
Identities = 1620/2056 (79%), Gaps = 147/2056 (7%)
Strand=Plus/Plus
Query 164 GACCATCGCCCTGG-AAGTTCACTGATAAACAGTATCTCAATATTTTGCAGTCCATGGCA 222
|||||||| | || |||||||| |||||||||||| | |||||||||||||| |||||
Sbjct 441 GACCATCG-GCAGGCAAGTTCACCGATAAACAGTATTTGAATATTTTGCAGTCTATGGCT 499
Query 223 CAATCTGTTCATGCCTTCGATCTCAATATG-CGAATTATCTTTTGGAA-TGCTATGGCGG 280
||| ||||||||| ||||||||| ||| | | ||||||||||||||| | | |||||||
Sbjct 500 CAAGCTGTTCATGTCTTCGATCTTAAT-GGCCAAATTATCTTTTGGAACT-CGATGGCGG 557
Query 281 AAAAGGTTTATGGGTACTCTGCTGCAGAAGCAGTT-GGGCAGAACCCAATTGACGTAATG 339
| ||| ||||||| | ||| ||||||||||| ||| ||| || || | ||| | || |
Sbjct 558 AGAAGCTTTATGGATTCTCAGCTGCAGAAGC-GTTAGGGAAGGACTCGATTAATATACTC 616
Query 340 GTAGATGATCGGGATGCCCCCT-TTGCAATGAATAT-TGCTCAACTTTGTTCCAATGGAG 397
||||||| || |||| | || |||||| ||||| | ||| | ||| || |||||
Sbjct 617 GTAGATGGTCAAGATG-CTGCTGTTGCAAAAAATATCT-TTCAGCGTTGCAGCAGTGGAG 674
Query 398 AGACCTGGACTGGCA-AGTTTCCTGTCAAGAGCAGAACT-GGAGAGAAATTTTCAGTTGT 455
||| |||||||| | |||||||||| |||| | || | ||||||| ||||| |||||
Sbjct 675 AGAGTTGGACTGG-AGAGTTTCCTGTTAAGAATA-AAATGGGAGAGAGGTTTTCGGTTGT 732
Query 456 CACTAC-ATGTTCCCCCTTCTATGCTGATGACGGTTCCCTTATTGGGATCGTTTCTGTCA 514
||||| || ||| || || |||| |||||| |||| ||||||||||| | | | |||
Sbjct 733 GACTACGAT-TTCTCCTTTTTATGATGATGATGGTTTGCTTATTGGGATTATATGTATCA 791
Query 515 C-AAGTGACGT-AGCACAGTATCTCAAC--CCGAGA-ATCTCTTTGGCTACATTAA-AGG 568
| || ||| | |||| | | ||||| |||||| || || |||| | || |||
Sbjct 792 CGAA-TGA-TTCGGCAC--TTTTTCAACGGCCGAGAGTTC-CTCCCGCTA-A-AAACAGG 844
Query 569 CGTC-AGAAGTTGAAACGAGCTCAAGCCCTGCAAGC-AATAGTTTTGCCTT-TAAACTTG 625
| | ||||| || | |||| ||| | | | ||| || ||| ||| || ||||
Sbjct 845 TGGCAAGAAGGGGATTCAAGCTTTTGCCGGGGGA-CTAATGGTGTTG-CTTCTAGGCTTG 902
Query 626 GTTTGGACTCCAAAAG-AGCTGTTGTATCCAAATTTGGCCTTGATTCTGATCAGCCTATA 684
|||| || ||| |||| ||||||||| || ||| |||||||||||||| | ||||||||
Sbjct 903 GTTTTGATTCC-AAAGAAGCTGTTGTGTCGAAACTTGGCCTTGATTCTCAGCAGCCTATT 961
Query 685 CAAGTTGCTATAGCTTCAAAGATATCAGATTTGGCATCTAAGGTGAGAAACAAGGTCAGG 744
|||| ||||||||| || ||||| |||||||||||||| |||||| | ||||||||||||
Sbjct 962 CAAGCTGCTATAGCATCTAAGATCTCAGATTTGGCATCCAAGGTGGGCAACAAGGTCAGG 1021
Query 745 TCGAAAATGCCAGCAGGTGATAGT-A-GTGTCACAGTGTCTGAGGGTGGCAGTGGGGATA 802
|||||||||| ||||||||||| | | | ||||| |||||||||| | ||||| |
Sbjct 1022 TCGAAAATGCGAGCAGGTGATAATAACGCCTCACA--CCCTGAGGGTGGAAATGGGGGCA 1079
Query 803 GTCATCATTCAGATCATGGTGTCTTCGGTGCTACTCTCTCTGACCACAGGGACGATGCAG 862
||||||| || ||||| ||| |||||| |||| || |||||||||| ||||| |||||||
Sbjct 1080 GTCATCAGTCTGATCAGGGTTTCTTCGATGCTGCTTTCTCTGACCAGAGGGAAGATGCAG 1139
Query 863 ---C-----A--C---CA-A--GA-GGGG-ATTTTATCCAGTCTCCTTTTGGTGTATTCA 904
| | | || | | |||| |||| |||||||||||||||||||| |||
Sbjct 1140 AAACAAATGATGCTAGCACACCTAGGGGGAATTTGATCCAGTCTCCTTTTGGTGTGTTCT 1199
Query 905 CATGTAACGATGACAAGT-TTGTTTCGAAACCCTTCAAAGATTCC-A-G-TG---ATG-- 955
|||||||||||| |||| || ||| ||| ||| | ||| ||| | | || |||
Sbjct 1200 TATGTAACGATGATAAGTCTT-CTTCAAAAGCCTCCGGAGAATCCAATGATGAAAATGAT 1258
Query 956 -GAAAGC-CTG-TAACCCT------TTTCACCTCAAAAG-CTGAAGAATGGATGGTAAAG 1005
|||| | ||| | |||| || ||||| |||| ||||||| ||||||||||||
Sbjct 1259 AGAAA-CTCTGTTGTCCCTAAGAAACTT-ACCTC-AAAGACTGAAGAGTGGATGGTAAAG 1315
Query 1006 AAAGGTTTGTCGTTGCCATGGAAAGGGACTGAGCAGGAAGG-TT--CAAG-AGTAAAGCC 1061
||||| |||| | |||||||||||| | ||||| |||||| || ||| || |||
Sbjct 1316 AAAGGACTGTCATGGCCATGGAAAGGAAATGAGCGGGAAGGTTTGGAAAGAAG-AAA--- 1371
Query 1062 TTCTCATTCTGTATGGCCTTGTGTACAGAATGaa-aaaaaGAAAGATA-AGTCTCACCAG 1119
| |||||||||| |||||||| || || |||||| || || ||||| | || |||| ||
Sbjct 1372 TGCTCATTCTGTGTGGCCTTGGGTGCATAATGAACAACAA-AAAGA-AGAGGCTCATCAT 1429
Query 1120 A-TCAATCCCTCT-TCTGGTGTTAAGTCTAAAAGCCAT-GCCTCTGAAAGTAATAAGCCT 1176
| | ||| ||| | | ||||||||||| |||||| | || |||||||||||| |||
Sbjct 1430 AGT-AATTCCTATAAC-AGTGTTAAGTCTGAAAGCC-TGGCAAGTGAAAGTAATAAACCT 1486
Query 1177 ACCAATAACAAGGCTTCTAGTTCGCGGTCTGCCTATATATATGTGAACAGCACAAGCAGC 1236
||||||| | | || | | ||| | || | || ||||||| ||| |||||||
Sbjct 1487 GCCAATAATGA-G--AATA--T-G-GGT-T--CTGT-TA-ATGTGAATAGCGCAAGCAGT 1534
Query 1237 CCTAGTAGCCGTAAAACTATCAGCTA-CAGTGTTATGAGCAAGGTGGATACAT--ATAGT 1293
|||| ||| || || || |||| | ||||||||||| |||||| | |||| ||||
Sbjct 1535 GCTAGCAGCTGTGGAAGTACCAGC-AGCAGTGTTATGAACAAGGTTG--ACATGGATAGC 1591
Query 1294 AATTGCTTGGAGTATGAAATTTTATGGGATGATTTGACAATCGGAGAACAAATTGGACAA 1353
| ||||| || |||||||| |||||||| ||||||||||| ||||||||||| || |||
Sbjct 1592 GACTGCTTAGACTATGAAATCTTATGGGAGGATTTGACAATTGGAGAACAAATCGGGCAA 1651
Query 1354 GGCTCATGTGGAACTGTCTATCACGGTCTGTGGTTTGGATCTGATGTAGCTGTAAAAGTG 1413
|| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||
Sbjct 1652 GGTTCATGTGGAACTGTCTATCATGGTCTATGGTTTGGATCTGATGTGGCTGTAAAGGTG 1711
Query 1414 ATCCCCAAACAAGAATATTCAGAAGAGGTCAT-ACAATCATTT-AGACAAGAGGTATCGC 1471
| ||||||||||||||||||||||| |||| || ||| ||| | ||||||||||||
Sbjct 1712 TTTTCCAAACAAGAATATTCAGAAGAGATCATAAC-ATC-TTTCAAACAAGAGGTATCAT 1769
Query 1472 TGATGAAAAGACTCAGGCATCCTAACGTTCTGCTGTTTATGGGAGCAGTGACTTTACCTC 1531
|||||||||| || || ||||| ||||||||||||||||||||||| ||| | | |||||
Sbjct 1770 TGATGAAAAGGCTTAGACATCCAAACGTTCTGCTGTTTATGGGAGCTGTGGCATCACCTC 1829
Query 1532 AGGGTCTCTGTATAGTGTCAGAATTCCTTCCACGTGGAAGTCTC-TTCAGTCTACTGCAG 1590
|| |||| ||||||||| |||| || || ||||||||||||||| ||| || | ||||||
Sbjct 1830 AGCGTCTTTGTATAGTGACAGAGTTTCTACCACGTGGAAGTCTCTTTC-GTTTGCTGCAG 1888
Query 1591 A-GAAGTATGTCAAAACTTGATTGGAGGCGGCGTATCAATATGGCCTTGGACATTGCTCG 1649
| ||| | ||||||||| |||| |||||| |||||| ||||||| | |||||||||||
Sbjct 1889 AGGAA-CAAGTCAAAACTAGATTTGAGGCGACGTATCCATATGGCATCAGACATTGCTCG 1947
Query 1650 CAGTATGAATTGTCTTCACCGCTGTAGTCCACCCATCATCATCCATCGTGATTTGAAGTC 1709
| ||||||| |||||||| ||||||||| |||||||| | || |||||| |||||||
Sbjct 1948 TGGCATGAATTATCTTCACCACTGTAGTCCTCCCATCAT--T-CACCGTGATCTGAAGTC 2004
Query 1710 GTCAAATCTGCTGGTAGA-CAAGAACTTGACCGTTAAGGTAGCTGACTTTGGTCTATCGC 1768
||||||||| ||||| || | ||||| ||| || ||||| ||||| |||||||| || |
Sbjct 2005 GTCAAATCTACTGGTTGATC-GGAACTGGACTGTGAAGGTTGCTGATTTTGGTCTTTCTC 2063
Query 1769 GTATCAAGCATCAGACATACCTAACCAGCAAGTCGGGAAAGGGAATGCCTCAATGGATGG 1828
| ||||||||| |||| ||||| || | ||| | |||| ||||| ||||||||||||||
Sbjct 2064 GCATCAAGCATGAGACGTACCTCACTA-CAA-AC-GGAAGGGGAACGCCTCAATGGATGG 2120
Query 1829 CACCAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAGTCTGACATTTACAGCTTTGGAG 1888
||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||
Sbjct 2121 CACCAGAAGTTCTTCGAAATGAGGCTGCTGATGAAAAGTCTGACGTTTACAGTTTTGGAG 2180
Query 1889 TAGTACTATGGGAGCTTGCCACAGAGAAGATCCCATGGGAAAATTTCAATTCGATGCAGG 1948
|||||||||||||||||| |||||||||||||||||||||||| | ||| | |||||||
Sbjct 2181 TAGTACTATGGGAGCTTGTGACAGAGAAGATCCCATGGGAAAATCTAAATGCTATGCAGG 2240
Query 1949 TGATCGGAGCTGTGGGGTTCATGAACCAGAGGCTGGAAATTCCAAAGGACATTGATCCTG 2008
|||| ||||| ||||||||||||||||||||||||||| | ||||| ||| |||| |||
Sbjct 2241 TGATTGGAGCCGTGGGGTTCATGAACCAGAGGCTGGAAGTCCCAAAAGACGTTGACCCTC 2300
Query 2009 ATTGGATCT-CATTAATAGAGAGCTGCTGGCACAGCGATACA--AA-GCTTAGACCCA-C 2063
| ||||| | | ||||| || ||||||||||||||||| || || | | ||||| | |
Sbjct 2301 AGTGGAT-TGCTTTAATGGAAAGCTGCTGGCACAGCGA-ACCGCAATG-T-AGACC-ATC 2355
Query 2064 ATTCCAAGAACTGATGGAGAAACTAAGAGATCTGCAAAGAAAGTATACAATACAGTTCCA 2123
||||||||| ||||||| ||| ||||||| || |||||||||||||| |||||||||||
Sbjct 2356 GTTCCAAGAATTGATGGACAAATTAAGAGAGCTTCAAAGAAAGTATACTATACAGTTCCA 2415
Query 2124 AGC-GATTCGTGCTGC 2138
||| | | ||||||||
Sbjct 2416 AGCAGCT-CGTGCTGC 2430
> AT5G49470.2 | Symbols: | PAS domain-containing protein tyrosine
kinase family protein | chr5:20063448-20068665 FORWARD LENGTH=3018
Length=3018
Score = 798 bits (432), Expect = 0.0
Identities = 1132/1455 (78%), Gaps = 107/1455 (7%)
Strand=Plus/Plus
Query 178 AAGTTCACTGATAAACAGTATCTCAATATTTTGCAGTCCATGGCACAATCTGTTCATGCC 237
|||||||| |||||||||||| | |||||||||||||| ||||| ||| ||||||||| |
Sbjct 454 AAGTTCACCGATAAACAGTATTTGAATATTTTGCAGTCTATGGCTCAAGCTGTTCATGTC 513
Query 238 TTCGATCTCAATAT-G-CGAATTATCTTTTGGAA-TGCTATGGCGGAAAAGGTTTATGGG 294
|||||||| || || | | ||||||||||||||| | | |||||||| ||| |||||||
Sbjct 514 TTCGATCT-AA-ATGGCCAAATTATCTTTTGGAACT-CAATGGCGGAGAAGCTTTATGGA 570
Query 295 TACTCTGCTGCAGAAGCAGTTGGGCAGAACCCAATTGACGTAATGGTAGATGATCGGGAT 354
| ||| ||| |||||||| | ||| || | || ||||| | | ||||||| || ||||
Sbjct 571 TTCTCAGCTTCAGAAGCACTGGGGAAGGATCCGATTGATATTCTTGTAGATGTTCAGGAT 630
Query 355 GCCCCCTTTGCA-ATGAATATTGCTCAACTTTGTTCCAATGGAGAGACCTGGACTGGCAA 413
|| | ||||| | |||||| ||| | ||| | |||||||| |||||||| |
Sbjct 631 GCTTCGGTTGCACA-GAATATCACTCGGCGTTGCAGTAGTGGAGAGAGTTGGACTGGTGA 689
Query 414 GTTTCCTGTCAAGAGCAGAA-CTGGAGAGAAATTTTCAGTTGTCACTAC-ATGTTCCCCC 471
||||||||| |||| || || ||||||||| ||||||||||| ||||| ||| | | ||
Sbjct 690 GTTTCCTGTAAAGAACA-AAGCTGGAGAGAGGTTTTCAGTTGTGACTACGATG-T-CTCC 746
Query 472 TTC-TATGCTGATGACGGTTCCCTTATTGGGATCGTTTCTGTCACAAGTGACGT-AGCAC 529
||| |||| |||||| |||| |||||||||||| | | | |||||| ||| | ||||
Sbjct 747 TTCTTATGATGATGATGGTTGTCTTATTGGGATCATATGTATCACAAATGA-TTCGGCAC 805
Query 530 AGTATCTC-A-ACCCGAGAATCTCTTTGGCT-ACATTAA--AGGCGTC-AGAAGTTGAAA 583
| | || | |||||||| |||| |||| | | || ||| | | ||||| |||||
Sbjct 806 --TCTTTCAAGACCCGAGAGGCTCTCCGGCTAAGA-CAAGGAGGGGGCAAGAAGGTGAAA 862
Query 584 CGAGCTCAAGCCCTGCAAGC-AATAGTTTTGCCTTTAAACTTGGT-TTGGACTCCAAAAG 641
|||||| || | | | | | |||| |||| | ||| |||||| || |||| | ||||
Sbjct 863 CGAGCTTTAGTCGGGTGA-CTAGTAGTGTTGCATCTAAGCTTGGTCTT-GACT-CGAAAG 919
Query 642 A-GCTGTTGTATCCAAATTTGGCCTTGATTCTGATCAGCCTATACAAGTTGCTATAGCTT 700
| || |||||||| ||| |||||||||||||| | |||||||||||||||||||||||||
Sbjct 920 AGGCGGTTGTATCAAAACTTGGCCTTGATTCTCAGCAGCCTATACAAGTTGCTATAGCTT 979
Query 701 CAAAGATATCAGATTTGGCATCTAAGGTGAGAAACAAGGTCAGGTCGAAAATGCCAGCAG 760
|||||||||||||||||| | || | || |||||||| ||||||||||| |||||
Sbjct 980 CAAAGATATCAGATTTGG--T----GG-GC-AA-CAAGGTCAAGTCGAAAATGCGAGCAG 1030
Query 761 GTGATAGTA--G-TGTCACAGTGTCTGAGGGTGGCAGTGGGGATAGTCATCATTCAGATC 817
|||||| || | || || | | ||||||||| |||||||| |||||||| || ||||
Sbjct 1031 GTGATAATAACGCTG-CAAACC-T-TGAGGGTGGAAGTGGGGACAGTCATCAATCTGATC 1087
Query 818 ATGGTGTCTTCGGTGCTACTCTCTCTGACCACAGGGACGATGCAGCACCAAG-------- 869
| ||| |||| | |||| || || |||||| ||||| ||||||||| ||||
Sbjct 1088 AGGGTTTCTTTGATGCTGCTTTCGCTGACCGGAGGGAGGATGCAGCAACAAGTGGTGCTG 1147
Query 870 A--------GGGG--ATTTTATCCAGTCTCCTTTTGGTGTATTCACATGTAACGATGACA 919
| |||| |||||||||| |||||||||||||||||| | ||| |||||| |
Sbjct 1148 ATACACCTAGGGGGGATTTTATCCAATCTCCTTTTGGTGTATTCTTACGTAGCGATGAGA 1207
Query 920 A-GTTTGTTTCGAAA-CCCTTCAAAGATTCCAGTGATGGAAAGCC-TGTAACC-CT-TT- 973
| | || | | ||| ||||||| |||||||||||||| |||| || || | || ||
Sbjct 1208 AAGCTTCTA-C-AAAGCCCTTCAGAGATTCCAGTGATG-AAAGTGATGGAAACTCTGTTG 1264
Query 974 T-C--A---C-CT--C---AAAAGCTGAAGAATGGATGGTAAAGAAAGGTTTGTCGTTGC 1021
| | | | || | |||||||||||| ||||||||||||||||| || || | ||
Sbjct 1265 TACCTAAAACACTGACCTCAAAAGCTGAAGAGTGGATGGTAAAGAAAGGATTATCATGGC 1324
Query 1022 CATGGAAAGGGACTGAGCAGG-AAGGTTC--AAGAGTAAAGCCTTCTCATTCTGTATGGC 1078
|||||||||||| ||| ||| |||||| ||| | || || | ||||||||| ||||
Sbjct 1325 CATGGAAAGGGAATGAA-AGGGAAGGTTTGGAAG-G-AAGGCGTAGTCATTCTGTGTGGC 1381
Query 1079 CTTGTGTACAGAATGaaaaa-aaGAAAGATA-AGTCTCACCAGATCAATCCCTCTTCTG- 1135
|||| || | ||||||| || || ||| | | || || | || | |||| | | ||
Sbjct 1382 CTTGGGTGCGGAATGAACAACAA-AAACA-ACAGGCTTATCAAAGCAATTC-TAATCACA 1438
Query 1136 GTGTTAAGTCTAAAAGCCATGCCTCTGAAAGTAATAAGCCTACCAATAACAAGGCT-TCT 1194
||||||||||| ||||||| || | |||||||| |||| || ||| |||| || || |
Sbjct 1439 GTGTTAAGTCTGAAAGCCAGGCATGTGAAAGTATTAAGGCTTCCAGTAACGAGCCTATGG 1498
Query 1195 AGT-TCGCGGTCTGCCTATATATA-TGTGAACAGCACAAGCAGCCCTAGTAGCCGTAAAA 1252
|| | | | ||| ||| | | || |||||||||||||||||| ||| ||| || ||
Sbjct 1499 GGTATTG-G-TCTTCCTCTGT-TAATGTGAACAGCACAAGCAGTAGTAGCAGCTGTGGAA 1555
Query 1253 CTATCAGCTA-CAGTGTTATGAGCAAGGTGGATACATATAGTAATTGCTTGGAGTATGAA 1311
|| |||| | ||||||||||| |||||| |||| ||||| | |||||||| ||||||
Sbjct 1556 GTACCAGC-AGCAGTGTTATGAACAAGGTCGATATGGATAGTGACTGCTTGGATTATGAA 1614
Query 1312 ATTTTATGGGATGATTTGACAATCGGAGAACAAATTGGACAAGGCTCATGTGGAACTGTC 1371
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct 1615 ATCTTATGGGAAGATTTGACAATTGGAGAACAAATCGGGCAAGGTTCATGTGGAACTGTC 1674
Query 1372 TATCACGGTCTGTGGTTTGGATCTGATGTAGCTGTAAAAGTGATCCCCAAACAAGAATAT 1431
||||||||||| ||||||||||| ||||| |||||||| ||| | ||||||||||||||
Sbjct 1675 TATCACGGTCTATGGTTTGGATCCGATGTGGCTGTAAAGGTGTTTTCCAAACAAGAATAT 1734
Query 1432 TCAGAAGAGGTCATA-CAATCATTTAGACAAGAGGTATCGCTGATGAAAAGACTCAGGCA 1490
||||||||| ||||| || || |||||||||||||||||| ||||||||||||| || ||
Sbjct 1735 TCAGAAGAGATCATAACA-TCTTTTAGACAAGAGGTATCGTTGATGAAAAGACTTAGACA 1793
Query 1491 TCCTAACGTTCTGCTGTTTATGGGAGCAGTGACTTTACCTCAGGGTCTCTGTATAGTGTC 1550
|||||||||| | |||||||||||||| ||||| | ||||||| |||||||||||||| |
Sbjct 1794 TCCTAACGTTTTACTGTTTATGGGAGCCGTGACATCACCTCAGCGTCTCTGTATAGTGAC 1853
Query 1551 AGAATTCCTTCCACG 1565
||| |||||||||||
Sbjct 1854 AGAGTTCCTTCCACG 1868
> AT1G18230.1 | Symbols: | pseudogene, putative protein kinase
| chr1:6272666-6273307 REVERSE LENGTH=642
Length=642
Score = 76.8 bits (41), Expect = 8e-13
Identities = 43/44 (98%), Gaps = 0/44 (0%)
Strand=Plus/Plus
Query 1866 GTCTGACATTTACAGCTTTGGAGTAGTACTATGGGAGCTTGCCA 1909
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Sbjct 469 GTCTGACATTTACAGCTTTGGAGTAGTATTATGGGAGCTTGCCA 512
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 113051627340
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5