BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477973
Length=2134
Score E
Sequences producing significant alignments: (Bits) Value
AT3G06650.1 | Symbols: ACLB-1 | ATP-citrate lyase B-1 | chr3:20... 3358 0.0
AT5G49460.1 | Symbols: ACLB-2 | ATP citrate lyase subunit B 2 |... 2266 0.0
> AT3G06650.1 | Symbols: ACLB-1 | ATP-citrate lyase B-1 | chr3:2079033-2083291
REVERSE LENGTH=2203
Length=2203
Score = 3358 bits (1818), Expect = 0.0
Identities = 1984/2061 (96%), Gaps = 23/2061 (1%)
Strand=Plus/Plus
Query 95 GCTCAGTGACCACAGTTCTTTTCGAGCCCATAAAATGGCTACGGGACAGCTATTTTCACG 154
||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 129 GCTAAGTGACCACAGTTCCTTTCGAGCCAATAAAATGGCTACGGGACAGCTATTTTCACG 188
Query 155 CAACACACAGGCGTTGTTCTACAATTATAAGCAGCTTCCCATTCAGCGGATGCTTGATTT 214
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 189 CAACACACAAGCGTTGTTCTACAATTATAAGCAGCTTCCCATTCAGCGTATGCTTGATTT 248
Query 215 TGATTTCCTATGTGGGCGAGAAACTCCTTCTGTTGCTGGTATCATTAACCCAGGTTCCGA 274
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 249 TGATTTCCTCTGTGGGCGAGAAACTCCTTCTGTTGCTGGTATCATAAACCCAGGTTCCGA 308
Query 275 GGGATTCCAAAAGCTATTTTTTGGTCAGGAGGAGATCGCCATCCCTGTCCATGCAGCCAT 334
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 309 GGGATTCCAAAAGCTATTTTTTGGTCAGGAGGAGATCGCCATCCCTGTCCACGCAGCCAT 368
Query 335 TGAGGCAGCATGCGCTGCGCATCCCACAGCTGATGTATTCATCAACTTCGCATCGTTTAG 394
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 369 TGAGGCAGCATGCGCTGCGCATCCCACAGCAGATGTATTCATCAACTTCGCATCGTTTAG 428
Query 395 AAGTGCTGCTGCTTCATCCATGGCTGCTTTGAAGCTGCCAACTATTAAAGTAGTGGCCAT 454
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 429 AAGTGCTGCTGCTTCATCCATGGCTGCTTTGAAGCAGCCAACTATTAAAGTAGTGGCCAT 488
Query 455 AATAGCAGAAGGTGTTCCGGAGTCAGACACTAAGCAGTTGATTGCTTATGCTCGGGCTAA 514
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 489 TATAGCAGAAGGTGTTCCGGAGTCAGACACTAAGCAGTTGATTGCTTATGCTCGTGCTAA 548
Query 515 CAATAAGGTTATTATTGGACCAGCTACTGTTGGAGGCGTTCAAGCTGGAGCCTTTAAAAT 574
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 TAATAAGGTTATTATTGGACCAGCTACTGTTGGAGGCGTTCAAGCTGGAGCCTTTAAAAT 608
Query 575 TGGTGATACTGCCGGAACAATTGACAATATCATCCAGTGCAAGTTGTACAGACCTGGATC 634
|||||| || || ||||| ||||||||||||||||| |||||||||||||| ||||||||
Sbjct 609 TGGTGACACAGCTGGAACTATTGACAATATCATCCAATGCAAGTTGTACAGGCCTGGATC 668
Query 635 TGTTGGCTTTGTCTCAAAATCTGGTGGCATGTCTAATGAAATGTACAATACCATTGCCCG 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 TGTTGGCTTTGTCTCAAAATCTGGTGGCATGTCTAATGAAATGTACAATACCATTGCCCG 728
Query 695 TGTGACAGATGGGATCTATGAAGGCATTGCTATTGGTGGGGATGTGTTCCCGGGCTCAAC 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 729 TGTGACAGATGGGATCTATGAAGGCATTGCTATTGGTGGGGATGTGTTCCCGGGCTCAAC 788
Query 755 TTTATCTGACCATATCCTGCGGTTTAACAACATCCCACAGATTAAGATGGTGGTTGTACT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 789 TTTATCTGACCATATCCTGCGGTTTAACAACATCCCACAGATTAAGATGGTGGTTGTACT 848
Query 815 TGGAGAGCTTGGAGGAAGAGATGAGTATTCTCTAGTTGAAGCCATGAAACAGGGAAAAGT 874
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 849 TGGAGAGCTTGGAGGAAGAGATGAATATTCTCTAGTTGAAGCCATGAAACAGGGAAAAGT 908
Query 875 GACCAAACCAGTGGTTGCTTGGGTCAGCGGGACTTGTGCACGTCTCTTCAAGTCCGAAGT 934
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 909 GACCAAACCAGTGGTTGCTTGGGTCAGCGGGACTTGTGCACGTCTATTCAAGTCCGAAGT 968
Query 935 GCAATTTGGTCATGCAGGGGCCAAAAGTGGTGGAGAGATGGAGTCTGCACAAGCCAAGAA 994
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 969 ACAATTTGGTCATGCAGGGGCCAAAAGTGGTGGAGAGATGGAGTCTGCACAAGCCAAGAA 1028
Query 995 TCAAGCGCTAAAAGACGCTGGAGCTACTGTACCCACTTCATTTGAAGCCCTAGAA-TCTG 1053
|||||||||| |||| |||||||||||||||||||||||||| |||||||||||| | ||
Sbjct 1029 TCAAGCGCTACAAGATGCTGGAGCTACTGTACCCACTTCATTCGAAGCCCTAGAAGT-TG 1087
Query 1054 CAATCAAGGAAACTTTTGACAAATTGGTTGAAGAGGGAAAGGTCTCTCCTATTAAGGAGG 1113
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1088 CAATCAAGGAAACTTTTGACAAATTGGTTGAAGAGGGAAAGGTCTCTCCTATTAAGGAAG 1147
Query 1114 TCACTCCTCCACAAATCCCTGAAGATCTCAGCTCTGCAATTAAGAGTGGGAAAGTCCGGG 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148 TCACTCCTCCACAAATCCCTGAAGATCTCAGCTCTGCAATTAAGAGTGGGAAAGTCCGGG 1207
Query 1174 CTCCTACCCACATCATCTCCACCATTTCTGATGACAGAGGGGAGGAACCATGCTATGCTG 1233
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1208 CTCCTACTCACATCATCTCCACCATTTCTGATGACAGAGGGGAGGAACCATGCTATGCTG 1267
Query 1234 GTGTGCCAATGTCATCCATCATTGAACAGGGTTATGGCGTGGGAGATGTCATTTCTCTCC 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1268 GTGTGCCAATGTCATCCATCATTGAACAGGGTTATGGCGTGGGAGATGTCATTTCCCTCC 1327
Query 1294 TATGGTTCAAACGTAGTCTTCCTCGTTATTGTACCAAATTCATTGAGATATGCATAATGT 1353
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1328 TATGGTTCAAACGTAGTCTTCCTCGATATTGTACCAAATTCATCGAGATATGCATAATGT 1387
Query 1354 TGTGCGCTGACCACGGTCCATGCGTCTCTGGTGCTCACAACACCATCGTAACAGCAAGAG 1413
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1388 TGTGCGCTGACCACGGTCCATGCGTCTCTGGCGCTCACAACACCATCGTAACAGCAAGAG 1447
Query 1414 CAGGAAAAGACCTTGTCTCAAGTCTTGTCTCAGGTCTATTAACAATTGGTCCTAGATTTG 1473
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1448 CAGGAAAAGACCTTGTCTCAAGTCTTGTCTCAGGTCTATTAACAATCGGTCCTAGATTTG 1507
Query 1474 GTGGTGCCATTGATGATGCAGCACGATACTTCAAGGACGCTTGTGACAGGAATCTCACAC 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1508 GTGGTGCCATTGATGATGCAGCACGATACTTCAAGGACGCTTGTGACAGGAATCTCACAC 1567
Query 1534 CTTATGAATTCGTGGAAGGCATGAAGAAGAAGGGAATCCGTGTCCCTGGCATTGGTCACA 1593
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1568 CTTATGAATTCGTGGAAGGCATGAAGAAGAAAGGAATCCGTGTCCCTGGCATTGGTCACA 1627
Query 1594 GGATAAAGAGCAGAGACAACAGAGACAAAAGAGTGGAGCTGCTTCAGAAATTTGCACGGT 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 GGATAAAGAGCAGAGACAACAGAGACAAAAGAGTGGAGCTGCTTCAGAAATTTGCACGGT 1687
Query 1654 CTAACTTCCCTGCAGTTAAGTACATGGAATACGCGGTCCAAGTAGAGACATACACACTGT 1713
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1688 CTAACTTCCCTGCAGTGAAGTACATGGAATACGCAGTCCAAGTAGAGACATACACACTGT 1747
Query 1714 CTAAAGCCAACAACCTCGTAATGAATGTCGATGGAGCCATTGGATCTCTCTTCTTAGACC 1773
|||||||||||||||| ||| | || ||||||||||||||||||||||||||||||||||
Sbjct 1748 CTAAAGCCAACAACCTGGTACTCAACGTCGATGGAGCCATTGGATCTCTCTTCTTAGACC 1807
Query 1774 TTCTCGCTGGAAGTGGGATGTTCACTAAGCAAGAGATAGACGAAATCGTTCAGATCGGTT 1833
||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct 1808 TTCTCGCTGGAAGTGGGATGTTCACAAAACAAGAGATAGACGAAATAGTTCAGATCGGTT 1867
Query 1834 ATCTCAACGGCCTCTTTGTCCTCGCTCGATCCATCGGTTTAATCGGGCACACATTCGATC 1893
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1868 ATCTCAACGGCCTCTTCGTCCTCGCTCGATCCATCGGTTTAATCGGGCACACATTCGATC 1927
Query 1894 AGAAGAGATTGAAGCAGCCACTGTACCGACACCCGTGGGAAGATGTCTTGTACACCAAGT 1953
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1928 AGAAGAGACTGAAGCAGCCACTGTACCGACACCCGTGGGAAGATGTCTTGTACACCAAGT 1987
Query 1954 AATCATATCATTATTCACTTCTTCT--T--T-----ATT------AT--T-CTCTCCCAT 1995
||||||||||||||||||||||||| | | ||| || | |||||||||
Sbjct 1988 AATCATATCATTATTCACTTCTTCTGGTCGTTCCTTATTCCTGTTATCATTCTCTCCCAT 2047
Query 1996 TAAGTTAGGATTTGTTTAATTATATATTTGTTCTGACAAT-TATCTGTTGTGATCTCTCA 2054
| ||||||| | ||||| |||||||||||||||||||| | ||||||||||||||||| |
Sbjct 2048 TCAGTTAGGCTATGTTTGATTATATATTTGTTCTGACACTCTATCTGTTGTGATCTCTTA 2107
Query 2055 ATACTT-ATAAAAATAAAAGAAGGTTCAATTTTAGAAGAATCATAATGTTTTGTTTAAAT 2113
|| ||| | ||||||||||||| |||||||||||||||||| ||||||||||| ||||||
Sbjct 2108 ATGCTTGA-AAAAATAAAAGAAAGTTCAATTTTAGAAGAATTATAATGTTTTGATTAAAT 2166
Query 2114 TCTTTTAAAAAGTTCAATATA 2134
|||||||||||||||||||||
Sbjct 2167 TCTTTTAAAAAGTTCAATATA 2187
Score = 78.7 bits (42), Expect = 2e-13
Identities = 87/107 (81%), Gaps = 9/107 (8%)
Strand=Plus/Plus
Query 1 AGCTGAGCTGATCTTATTTGTTTCTTCCCTCCCATTTATTCCATTCC-CTTC--CC-TTC 56
||||||||| |||||||||||||||||||||||||||| | |||| ||| || |||
Sbjct 1 AGCTGAGCTCATCTTATTTGTTTCTTCCCTCCCATTTAATGGTTTCCTCTTAAACCATTC 60
Query 57 C-T-CC-TAACTACAAAA--CAATCTACTCTCCACCTAACATTGCTC 98
| | || | || | || |||||||||||||||||||||||||||
Sbjct 61 CCTTCCCTTCCTCCTAACTGCAATCTACTCTCCACCTAACATTGCTC 107
> AT5G49460.1 | Symbols: ACLB-2 | ATP citrate lyase subunit B 2
| chr5:20054523-20058464 FORWARD LENGTH=2336
Length=2336
Score = 2266 bits (1227), Expect = 0.0
Identities = 1665/1880 (89%), Gaps = 15/1880 (1%)
Strand=Plus/Plus
Query 129 ATGGCTACGGGACAGCTATTTTCACGCAACACACAGGCGTTGTTCTACAATTATAAGCAG 188
||||| ||||||||||| ||||| || | |||||| || ||||||||||| |||||||||
Sbjct 241 ATGGCAACGGGACAGCTTTTTTCTCGTACCACACAAGCTTTGTTCTACAACTATAAGCAG 300
Query 189 CTTCCCATTCAGCGGATGCTTGATTTTGA-TTTCCTATGTGGGCGAGAAACTCCTTCTGT 247
||||| |||| || ||||| ||||| || ||| || ||||| || ||||| ||||||||
Sbjct 301 CTTCCTGTTCAACGAATGCTCGATTTCGACTTT-CTCTGTGGACGTGAAACGCCTTCTGT 359
Query 248 TGCTGGTATCATTAACCCAGGTTCCGAGGGATTCCAAAAGCTATTTTTTGGTCAGGAGGA 307
|||||| ||||| || || ||||| || || || |||||||| ||||| || ||||||||
Sbjct 360 TGCTGGAATCATAAATCCTGGTTCTGAAGGTTTTCAAAAGCTCTTTTTCGGGCAGGAGGA 419
Query 308 GATCGCCATCCCTGTCCATGCAGCCATTGAGGCAGCATGCGCTGCGCATCCCACAGCTGA 367
||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||||| ||
Sbjct 420 AATCGCTATCCCTGTTCATGCCGCCATTGAGGCAGCTTGTGCTGCGCATCCAACAGCGGA 479
Query 368 TGTATTCATCAACTTCGCATCGTTTAGAAGTGCTGCTGCTTCATCCATGGCTGCTTTGAA 427
||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 480 TGTATTCATCAACTTTGCATCTTTTAGGAGTGCTGCTGCTTCATCCATGGCTGCTTTGAA 539
Query 428 GCTGCCAACTATTAAAGTAGTGGCCATAATAGCAGAAGGTGTTCCGGAGTCAGACACTAA 487
|| ||| ||||||||||| ||||| || ||||| ||||||||||| || |||||||||||
Sbjct 540 GCAGCCGACTATTAAAGTTGTGGCAATTATAGCTGAAGGTGTTCCAGAATCAGACACTAA 599
Query 488 GCAGTTGATTGCTTATGCTCGGGCTAACAATAAGGTTATTATTGGACCAGCTACTGTTGG 547
|||| ||||||| |||||||| || |||||||||||| |||||||||| |||||||||||
Sbjct 600 GCAGCTGATTGCGTATGCTCGTGCAAACAATAAGGTTGTTATTGGACCGGCTACTGTTGG 659
Query 548 AGGCGTTCAAGCTGGAGCCTTTAAAATTGGTGATACTGCCGGAACAATTGACAATATCAT 607
||| ||||||||||||||||||| |||||||||||||| ||||||||||| || || ||
Sbjct 660 AGGTATTCAAGCTGGAGCCTTTAAGATTGGTGATACTGCAGGAACAATTGATAACATTAT 719
Query 608 CCAGTGCAAGTTGTACAGACCTGGATCTGTTGGCTTTGTCTCAAAATCTGGTGGCATGTC 667
|||||||||| | |||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct 720 CCAGTGCAAGCTATACAGACCTGGATCTGTTGGTTTTGTCTCCAAATCTGGTGGAATGTC 779
Query 668 TAATGAAATGTACAATACCATTGCCCGTGTGACAGATGGGATCTATGAAGGCATTGCTAT 727
|||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||
Sbjct 780 TAATGAAATGTACAATACTGTTGCCCGTGTGACTGATGGGATCTACGAAGGCATTGCTAT 839
Query 728 TGGTGGGGATGTGTTCCCGGGCTCAACTTTATCTGACCATATCCTGCGGTTTAACAACAT 787
|||||| || |||||||| || || |||||||||||||| ||||| ||||||||||||||
Sbjct 840 TGGTGGAGACGTGTTCCCAGGATCGACTTTATCTGACCACATCCTTCGGTTTAACAACAT 899
Query 788 CCCACAGATTAAGATGGTGGTTGTACTTGGAGAGCTTGGAGGAAGAGATGAGTATTCTCT 847
||||||||| || ||| |||||||||||||||||||||||||||||||||| || |||||
Sbjct 900 CCCACAGATAAAAATGATGGTTGTACTTGGAGAGCTTGGAGGAAGAGATGAATACTCTCT 959
Query 848 AGTTGAAGCCATGAAACAGGGAAAAGTGACCAAACCAGTGGTTGCTTGGGTCAGCGGGAC 907
|||||||| ||||| |||||||||| | ||||| ||||||||||||||||| || ||
Sbjct 960 TGTTGAAGCTTTGAAAGAGGGAAAAGTCAATAAACCTGTGGTTGCTTGGGTCAGTGGAAC 1019
Query 908 TTGTGCACGTCTCTTCAAGTCCGAAGTGCAATTTGGTCATGCAGGGGCCAAAAGTGGTGG 967
||||||||| ||||||||||| ||||| || |||||||||||||| ||||||||||| ||
Sbjct 1020 TTGTGCACGACTCTTCAAGTCTGAAGTACAGTTTGGTCATGCAGGTGCCAAAAGTGGCGG 1079
Query 968 AGAGATGGAGTCTGCACAAGCCAAGAATCAAGCGCTAAAAGACGCTGGAGCTACTGTACC 1027
|||||||||||||||||||||||||||||||| || | ||| |||||||||| ||| ||
Sbjct 1080 CGAGATGGAGTCTGCACAAGCCAAGAATCAAGCTCTCATAGATGCTGGAGCTATTGTTCC 1139
Query 1028 CACTTCATTTGAAGCCCTAGAATCTGCAATCAAGGAAACTTTTGACAAATTGGTTGAAGA 1087
||||||||||||||| ||||||||||||||||| || |||||||| ||| ||||||||||
Sbjct 1140 CACTTCATTTGAAGCTCTAGAATCTGCAATCAAAGAGACTTTTGAGAAACTGGTTGAAGA 1199
Query 1088 GGGAAAGGTCTCTCCTATTAAGGAGGTCACTCCTCCACAAATCCCTGAAGATCTCAGCTC 1147
||||||||||||||||| ||||| |||| |||||||||||||||||| ||||||| ||
Sbjct 1200 AGGAAAGGTCTCTCCTATCAAGGAAGTCATTCCTCCACAAATCCCTGAGGATCTCAATTC 1259
Query 1148 TGCAATTAAGAGTGGGAAAGTCCGGGCTCCTACCCACATCATCTCCACCATTTCTGATGA 1207
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1260 TGCAATTAAGAGTGGGAAAGTCCGGGCTCCTACTCACATCATCTCCACCATATCTGATGA 1319
Query 1208 CAGAGGGGAGGAACCATGCTATGCTGGTGTGCCAATGTCATCCATCATTGAACAGGGTTA 1267
|||||||||||||||||||||||||||||| |||||||| |||||||| ||||| || ||
Sbjct 1320 CAGAGGGGAGGAACCATGCTATGCTGGTGTTCCAATGTCTTCCATCATCGAACAAGGCTA 1379
Query 1268 TGGCGTGGGAGATGTCATTTCTCTCCTATGGTTCAAACGTAGTCTTCCTCGTTATTGTAC 1327
||| ||||| ||||||||||| || |||||||||||||||||||| |||||||| |||||
Sbjct 1380 TGGAGTGGGTGATGTCATTTCCCTTCTATGGTTCAAACGTAGTCTACCTCGTTACTGTAC 1439
Query 1328 CAAATTCATTGAGATATGCATAATGTTGTGCGCTGACCACGGTCCATGCGTCTCTGGTGC 1387
|||||||||||||||||||||||| |||| ||||| ||||||||||||||||| || ||
Sbjct 1440 AAAATTCATTGAGATATGCATAATGCTGTGTGCTGATCACGGTCCATGCGTCTCCGGCGC 1499
Query 1388 TCACAACACCATCGTAACAGCAAGAGCAGGAAAAGACCTTGTCTCAAGTCTTGTCTCAGG 1447
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1500 TCACAACACCATTGTAACAGCAAGAGCAGGCAAAGACCTCGTCTCAAGTCTTGTCTCAGG 1559
Query 1448 TCTATTAACAATTGGTCCTAGATTTGGTGGTGCCATTGATGATGCAGCACGATACTTCAA 1507
| |||| || |||||||| |||||||||||||||||||||| || || |||||||||||
Sbjct 1560 TTTATTGACCATTGGTCCCCGATTTGGTGGTGCCATTGATGACGCTGCTCGATACTTCAA 1619
Query 1508 GGACGCTTGTGACAGGAATCTCACACCTTATGAATTCGTGGAAGGCATGAAGAAGAAGGG 1567
||||| ||||||||||||||||||||||||||||| || || || |||||||| |||||
Sbjct 1620 AGACGCGTGTGACAGGAATCTCACACCTTATGAATTTGTTGAGGGAATGAAGAAAAAGGG 1679
Query 1568 AATCCGTGTCCCTGGCATTGGTCACAGGATAAAGAGCAGAGACAACAGAGACAAAAGAGT 1627
|||||| ||||| || ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1680 AATCCGAGTCCCCGGGATTGGACACAGGATCAAGAGCAGAGACAACAGAGACAAAAGAGT 1739
Query 1628 GGAGCTGCTTCAGAAATTTGCACGGTCTAACTTCCC-TGCAGTTAAGTACATGGAATACG 1686
|||||| |||||||||||||| ||||| |||||||| | |||| ||||||||||| ||||
Sbjct 1740 GGAGCTTCTTCAGAAATTTGCTCGGTCCAACTTCCCAT-CAGTGAAGTACATGGAGTACG 1798
Query 1687 CGGTC-CAAGTAGAGACATACACACTGTCTAAAGCCAA-CAACCTCGTAATGAATGTCGA 1744
| || || || ||||||||||| || || |||| ||| |||||||||| | || || ||
Sbjct 1799 CAGTGACA-GTGGAGACATACACGCTCTC-AAAGGCAAACAACCTCGTACTCAACGTTGA 1856
Query 1745 TGGAGCCATTGGATCTCTCTTCTTAGACCTTCTCGCTGGAAGTGGGATGTTCACTAAGCA 1804
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct 1857 TGGAGCCATTGGATCTCTCTTCTTGGACCTTCTAGCTGGAAGTGGGATGTTCACTAAACA 1916
Query 1805 AGAGATAGACGAAATCGTTCAGATCGGTTATCTCAACGGCCTCTTTGTCCTCGCTCGATC 1864
|||||| ||||| || ||||||||||||||||||||||| || ||||| || ||||| ||
Sbjct 1917 AGAGATTGACGAGATTGTTCAGATCGGTTATCTCAACGGTCTGTTTGTTCTTGCTCGCTC 1976
Query 1865 CATCGGTTTAATCGGGCACACATTCGATCAGAAGAGATTGAAGCAGCCACTGTACCGACA 1924
||||||||| ||||||||||| || ||||||||||||||||||||||||||||| || ||
Sbjct 1977 CATCGGTTTGATCGGGCACACGTTTGATCAGAAGAGATTGAAGCAGCCACTGTATCGTCA 2036
Query 1925 CCCGTGGGAAGATGTCTTGTACACCAAGTAATCATATCATTATTCACTTCT-TCTTTATT 1983
||| ||||||||||| ||||||||||||||| | ||||| | || | || | ||| ||
Sbjct 2037 CCCATGGGAAGATGTGTTGTACACCAAGTAAA-AC-TCATT-T-CAATCCTATTTTTGTT 2092
Query 1984 ATTCTCTCCCATTAAGTTAG 2003
||| | ||| ||||| ||||
Sbjct 2093 ATTAT-TCCAATTAA-TTAG 2110
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105822748860
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5