BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477989 Length=863 Score E Sequences producing significant alignments: (Bits) Value AT3G06740.1 | Symbols: GATA15 | GATA transcription factor 15 | ... 1077 0.0 > AT3G06740.1 | Symbols: GATA15 | GATA transcription factor 15 | chr3:2126414-2127467 FORWARD LENGTH=896 Length=896 Score = 1077 bits (583), Expect = 0.0 Identities = 808/906 (89%), Gaps = 57/906 (6%) Strand=Plus/Plus Query 1 GGTATCTGTTGGGTCGTTCGTTTCTTTGAAAT---TaaaaaaaTAtctctgtttctctga 57 |||||||||| || | ||||||||||||||| ||||||| |||||||||||||||| Sbjct 3 GGTATCTGTT-GG--G-TCGTTTCTTTGAAATCAAAAAAAAAAAATCTCTGTTTCTCTGA 58 Query 58 cactctctctctctgtttctACTTTCAAGATTCAAATTTTTGTTTCCCCTGATCCACTCG 117 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 59 CACTCTCTCTCTCTGTTTCTACTTTCAAGATTCAAATTTTTG-TTCCCCTGATCCACTCG 117 Query 118 TCTTTGAA-T-TCAT--A-TC-----TGTTTCTTGCC-ACTCTGATCTCTATTTGAAACC 166 |||||||| | |||| | || ||||||||||| |||||||||||||| |||||| Sbjct 118 TCTTTGAATTCTCATCAAGTCTTATATGTTTCTTGCCTACTCTGATCTCTATCGGAAACC 177 Query 167 CTAGATCCATATCTTCTCCACTTGACACTAG-T------TCACGATCTGCGGTTCTCCGA 219 ||||||||||||||||| |||||||||||| | |||||||||||||||| | || Sbjct 178 CTAGATCCATATCTTCTTGACTTGACACTAGTTCACGAATCACGATCTGCGGTTC-CTGA 236 Query 220 AGCTGGTAATGCTAGATCCTACCGAGAAAACAGTTATCGATTCAGAGGCCATGGAAAGCA 279 ||||||||||||||||||| |||||| || ||| ||||||||||| | |||||||||| Sbjct 237 AGCTGGTAATGCTAGATCCCACCGAG--AA-AGTAATCGATTCAGAATCAATGGAAAGCA 293 Query 280 AACTCACATCAGTAGATGCGATCGAAGAACACAGCAGCAGTAGTAGCAGTAATGAAGGTA 339 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct 294 AACTCACATCAGTAGATGCGATCGAAGAACACAGCAGC---AGTAGCAGTAATGAAGCTA 350 Query 340 TCAGCAACGAGAAGAAGAGTTGTGCCATTTGTGGTACTAGCAAAACCCCTCTTTGGCGAG 399 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 351 TCAGCAACGAGAAGAAGAGTTGTGCCATTTGTGGTACCAGCAAAACCCCTCTTTGGCGAG 410 Query 400 GCGGTCCCGCCGGTCCCAAGTCGCTATGTAACGCATGCGGGATCCGAAACAGgaagaaga 459 ||||||| ||||||||||||||||| |||||||||||||||||| ||||||| ||||| | Sbjct 411 GCGGTCCTGCCGGTCCCAAGTCGCTTTGTAACGCATGCGGGATCAGAAACAGAAAGAAAA 470 Query 460 gaagaacactgatctcaaatagatcagaagataagaagaagaagaatcataacagaaATC 519 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 471 GAAGAACACTGATCTCAAATAGATCAGAAGATAAGAAGAAGAAGAGTCATAACAGAAACC 530 Query 520 CAAAGTTCGGTGACTCGTTGAAGCAGAGACTAATGGAATTGGGGAGAGAAGTGATGATGC 579 | ||||| |||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 531 CGAAGTTTGGTGACTCGTTGAAGCAGCGATTAATGGAATTGGGGAGAGAAGTGATGATGC 590 Query 580 AGCGATCAACGGCTGAGAATCAACGACGGAAGAAGCTCGGCGAAGAAGAGCAAGCCGCTG 639 ||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| | Sbjct 591 AGCGATCAACGGCTGAGAATCAACGGCGGAATAAGCTTGGCGAAGAAGAGCAAGCCGCCG 650 Query 640 TGTTACTCATGGCTCTCTCTTATGCTTCTTCCGTTTATGCTTAACGAATTTTCTGGATCT 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 651 TGTTACTCATGGCTCTCTCTTATGCTTCTTCCGTTTATGCTTAACGAATTTTCTGGATCT 710 Query 700 TTACCTTAAAGTTTTCAGGTGA-AATAAATTTTGTAGGAtgtgtaacgaattaatgtgta 758 | | || ||| | | | | ||| ||||||||||||||||||||||||||||||||| Sbjct 711 TAAGTTTTAAGGTGAAA--TAATAATTAATTTTGTAGGATGTGTAACGAATTAATGTGTA 768 Query 759 atttttgt--g--tt-----g-t-ttg----aattaactaaattttgaaatttttgtATC 803 |||||||| | || | | ||| ||||||||||||||||||||||||||||| Sbjct 769 ATTTTTGTATGCGTTTTTTTGGTGTTGTTTGAATTAACTAAATTTTGAAATTTTTGTATC 828 Query 804 TGGTTTATGTGATCT--GGTGAAGAATGAATGAATGAA--A--GGTCAAGATGATTTTCT 857 | ||||||||||||| ||||||||||||||||||||| | |||||| |||||||||| Sbjct 829 TTGTTTATGTGATCTCTGGTGAAGAATGAATGAATGAATGAAAGGTCAAAATGATTTTCT 888 Query 858 TCCGAC 863 |||||| Sbjct 889 TCCGAC 894 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42096215186 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5