BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478013
Length=1930
Score E
Sequences producing significant alignments: (Bits) Value
AT3G06930.2 | Symbols: ATPRMT4B, PRMT4B | protein arginine meth... 3029 0.0
AT5G49020.1 | Symbols: ATPRMT4A, PRMT4A | protein arginine meth... 1472 0.0
> AT3G06930.2 | Symbols: ATPRMT4B, PRMT4B | protein arginine methyltransferase
4B | chr3:2185143-2189387 REVERSE LENGTH=2025
Length=2025
Score = 3029 bits (1640), Expect = 0.0
Identities = 1839/1932 (95%), Gaps = 26/1932 (1%)
Strand=Plus/Plus
Query 24 ATCTGTACATTCGCAGCGTTTTGTAAAAATGGAGGTGTCTTCTGTGAAAAAGCTTGAGCA 83
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 64 ATCTGTACATTCGCATCGTTTTGTAAAAATGGAGGTATCTTCTGTGAAAAAGCTTGAGCA 123
Query 84 GCTGGAGTTCTCTTTAGACTCGGTCACTGATCTCTCTGCCTCTTCCGCTTCGTCGTCCAC 143
|||||||| ||||||||| || ||||||||||||||| | ||||||| |||||||||| |
Sbjct 124 GCTGGAGTACTCTTTAGAGTCAGTCACTGATCTCTCTTCGTCTTCCGTTTCGTCGTCCTC 183
Query 144 TCCAGCTGTAGCTACGTTTTCCTGCGTTGATGGAGTCACGGAGCTCCGATTTCTGCAATC 203
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 184 TCCAGCTGTAGCTACGTTTTCCTACGTTGATGGAGTCACGGAGCTCCGATTTCTGCAATC 243
Query 204 GGATTCGACCCATTGTTTCAATTTTGATCTCGCTACCGCTCAGTTATTCAAGTTGGGGCC 263
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 244 GGATTCGACCCATTGTTTCAATTTTGATCTCGCTTCCGCTCAGTTATTCAAGTTGGGGCC 303
Query 264 AGTGCATTTCATCTGTGTATCTGA----T--AG---TTCAGAGGAGAAATCATTCTCCCA 314
||| |||||||||||||||||||| | || |||||||||||||||||||||| |
Sbjct 304 AGTCCATTTCATCTGTGTATCTGATGGTTCAAGTTCTTCAGAGGAGAAATCATTCTCCAA 363
Query 315 AGGAGTCAATATAAAATTTAAAAATGATAAGGATAGCAAGGATTTTTGTGAGTCCTTTCA 374
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |
Sbjct 364 AGGAGTCAATATAAAATTCAAAAATGAGAAGGATAGCAAGGATTTTTGTGAGTCCTTTGA 423
Query 375 AGAGTGGAGAAAGGATGCTGTTGTTCAAGGATCATCCTTTCAAAATGGAACGGTTTCAGC 434
|||||||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 424 AGAGTGGAGAAATGATTCTGTTGTTCAAGGATCATCCTTGCAAAATGGAACAGTTTCAGC 483
Query 435 TAATAAAAGCAAGTTCGACACTAAGATAGAGGCGTCATCGGCCAAAATGTATTTCCATTA 494
|||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||
Sbjct 484 TAATAAAAGCAAGTTCGACAATAAGATAGAGGCGTCATCGGCAAAAATGTATTTTCATTA 543
Query 495 TTATGGACAACTTCTACATCAACAAAATATGCTACAAGATTATGTGAGGACAGGTACATA 554
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||
Sbjct 544 TTATGGACAACTTCTACATCAGCAAAATATGCTACAAGATTATGTGCGGACAGGTACGTA 603
Query 555 TTATGCCGCAGTCATGGAGAATCGTTCAGATTTTGCTGGTCGTGTTGTGGTCGATGTGGG 614
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 604 CTATGCCGCAGTCATGGAGAATCATTCAGATTTTGCTGGTCGTGTTGTGGTCGATGTGGG 663
Query 615 TGCTGGGAGTGGCATTTTGTCAATGTTTGCTGCCCAGGCTGGTGCCAAACATGTGTATGC 674
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 664 TGCTGGGAGTGGCATTTTGTCAATGTTTGCGGCCCAGGCTGGTGCCAAACATGTGTATGC 723
Query 675 GGTTGAAGCATCAGAAATGGCTGAGTATGCTCGTAAGCTGATTGCTGGAAACCCATTATT 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 724 GGTTGAAGCATCAGAAATGGCTGAGTATGCTCGTAAGCTGATTGCTGGAAACCCATTATT 783
Query 735 CGCTGAACGGATCACAGTCATCAAGGGTAAAGTTGAGGATATCGAGTTGCCTGAGAAAGC 794
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 784 CGCTGACCGAATCACAGTCATCAAGGGTAAAGTTGAGGATATCGAGTTGCCTGAGAAAGC 843
Query 795 AGATATTTTGATCTCTGAACCGATGGGCACCTTATTGGTCAACGAGAGAATGTTAGAATC 854
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 844 AGATATTTTGATTTCTGAACCGATGGGCACCTTATTGGTCAACGAGAGAATGTTAGAATC 903
Query 855 GTATGTAATTGCTAGGGATCGTTTTATGTCTTCAAAGGGCAAAATGTTTCCCACTGTCGG 914
|||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||
Sbjct 904 GTATGTAATTGCTAGGGATCGTTTTATGACTCCAAAAGGCAAAATGTTTCCCACTGTCGG 963
Query 915 AAGGATTCACATGGCACCTTTTTCTGATGAATTCTTATTTATTGAGATGGCAAATAAGGC 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 AAGGATTCACATGGCACCTTTTTCTGATGAATTCTTATTTATTGAGATGGCAAATAAGGC 1023
Query 975 TATGTTTTGGCAACAGCAGAACTATTATGGAGTTGATCTGACACCTCTATATGGATCAGC 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1024 TATGTTTTGGCAACAGCAGAACTATTATGGAGTTGATCTGACACCTCTATATGGATCAGC 1083
Query 1035 ACACCAAGGTTATTTTTCTCAGCCCGTTGTTGATGCATTTGATCCGAGATTATTAGTGGC 1094
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1084 GCACCAAGGTTATTTTTCTCAGCCCGTGGTTGATGCATTTGATCCGAGATTATTAGTGGC 1143
Query 1095 TTCTCCGATGTTTCACATGATAGATTTCACTCAAATGAAGGAAGAAGATTTTTACGAGAT 1154
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1144 TTCTCCGATGTTCCACATGATAGATTTCACTCAAATGAAGGAAGAAGATTTTTACGAGAT 1203
Query 1155 TGATATCCCGTTGAAGTTCACTGCTTCCATGTGCACCAGAGTGCATGGACTTGCCTGCTG 1214
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1204 TGATATCCCGTTGAAGTTCACTGCTTCCATGTGCACCAGAATGCATGGACTTGCCTGCTG 1263
Query 1215 GTTCGACGTTCTCTTCGACGGGAGCACGGTCCAAAGATGGCTCACAACTGCTCCTGGTGC 1274
||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1264 GTTTGACGTTCTCTTTGACGGGAGCACGGTCCAAAGATGGCTCACAACTGCTCCCGGTGC 1323
Query 1275 ACCTACAACGCATTGGTACCAAATCAGATATGTTCTCTCGCAGCCTATTTACGTAATGGC 1334
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1324 ACCTACAACGCATTGGTACCAAATCAGATGTGTTCTCTCGCAGCCTATTTACGTAATGGC 1383
Query 1335 AGGTCAAGAGATCACTGGTAGACTTCATTTGATAGCCCACAGTGCTCAGAGTTACACCAT 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1384 AGGTCAAGAGATCACTGGTAGACTTCATTTGATAGCCCACAGTGCTCAGAGTTACACCAT 1443
Query 1395 AGATCTAACTTTATCAGCTAAAATGTGGGGTCCCGGTGCAAGTCAAGGTGGAATTCTCCA 1454
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1444 AGATCTAACTTTATCAGCTAAAATGTGGGGGCCCGGTGCAAGTCAAGGCGGAATTCTCCA 1503
Query 1455 ATCATCGACATGCAAATTCGATCTGAAAGAACCTTATTATAGAATGTCTCAGCCACAAGC 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1504 ATCATCGACATGCAAATTCGATCTGAAAGAACCTTATTATAGAATGTCTCAGCCACAAGC 1563
Query 1515 ATACCCTGTTGCACAAGAACCACCTCTACAACCACAACCAGAGCTAAATACACAG--G-A 1571
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |
Sbjct 1564 ATACCCTGTTGCACAAGAACCACCTCTACAACCACAACCAGAGCTAAGTACACAGCAGGA 1623
Query 1572 CATACAAACACCAAACGATGAATTAGAAGAAGAGTTACTGCAACAACCGCCACAGAACCC 1631
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1624 CATACAAACACCAAACGATGAATTAGAAGAAGAGTTACTGCAACAATTGCCACAGAACCC 1683
Query 1632 GAGTGCCCAGCTCTAAAAGCTTATACA-TGAAATGAAGGTGAT-GATAATA-TC---ATC 1685
|||||||||||||||||||| ||| | |||||||||||||| ||| ||| | |||
Sbjct 1684 AAGTGCCCAGCTCTAAAAGCTAATA-AGTGAAATGAAGGTGAGAGATGATAATTGGGATC 1742
Query 1686 TTTGAATCTCAGTCATATTT-GAACTTGGGATTTCTGTTTGTTACGTCAAAAAGGTAAAA 1744
|||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||
Sbjct 1743 TTTGAATCTCAGTCATATTTTGAGCTTGGGATTTCTGTTTGTAACGTCAAAAAGGTAAAA 1802
Query 1745 ----TGTTTCTGGTGTCTTTGTGAGTTTTGGTATGGTTCTATCAAAATGATGAGCATGGA 1800
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 1803 AAAATGTTTCTGGTGTCTTTATGAGTTTTGGTATGGAAAGATCAAAATGATGAGCATGGA 1862
Query 1801 AAGATCTTATCATTCCCATTGCTTCCATGTAAGAGTCTCTGCTTCTTTGTGT-TTTCTTT 1859
||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||
Sbjct 1863 AAGATCTTATCATTCCCATTGCTTCCATGGAAAAGTCTCTGCTTCTTTGTGTATTTCTTT 1922
Query 1860 TCACACCCAACTTATCAATTATTTAAGGTATCTT-AACATCCACACGCAATGTAAACAAT 1918
||||||||||||||||||||||||| | |||||| || | ||||||||||||||||||||
Sbjct 1923 TCACACCCAACTTATCAATTATTTACGTTATCTTTAAAAGCCACACGCAATGTAAACAAT 1982
Query 1919 GAAACAAGAATC 1930
||| ||||||||
Sbjct 1983 GAATCAAGAATC 1994
> AT5G49020.1 | Symbols: ATPRMT4A, PRMT4A | protein arginine methyltransferase
4A | chr5:19871251-19874920 FORWARD LENGTH=1914
Length=1914
Score = 1472 bits (797), Expect = 0.0
Identities = 1273/1497 (85%), Gaps = 55/1497 (4%)
Strand=Plus/Plus
Query 80 AGCAGCTGGAGTTCTCTTTAGACTCGGTCACTGATCTCTCTGCCT-CTTCCGC-T-TC-G 135
|||||| |||||| || | | ||| |||||||||||| || || ||||| | | ||
Sbjct 113 AGCAGCAAGAGTTCACTCTCGCCTCCGTCACTGATCTCACT-TCTCCTTCCTCATCTCTT 171
Query 136 TCGTCCACTCCAGCTGTAGCTACGTTTTCCTGCGTTGATGGAGTCACGGAGCTCCGATTT 195
|||||| |||| | ||||||||||||||| |||||| ||| ||||| ||| |||||||||
Sbjct 172 TCGTCCTCTCCTGTTGTAGCTACGTTTTCATGCGTTAATGAAGTCAAGGAACTCCGATTT 231
Query 196 CTGCAATCGGATTCGACCCATTGTTTCAATTTTGATC-TCGCTACCG-CTCAGTTATTCA 253
| | ||||| | ||| | || |||||| |||||||| | | | || ||||||| ||||
Sbjct 232 CAGGAATCGAAATCGTCTGATGGTTTCAGTTTTGATCTTAG-T-TCGACTCAGTTGTTCA 289
Query 254 AGTTGGGGCCAGTGCATTTCATC-TGTGTATCTGATAGTTC-A--------G---AGGAG 300
||||||||||| | || |||| | |||||||||||| |||| | | |||||
Sbjct 290 AGTTGGGGCCACTTCAGTTCA-CTTGTGTATCTGATGGTTCGATTTCTTCTGCAAAGGAG 348
Query 301 AAA---TCATTCTCCCAAGGAG-TCAATATAAAATTTAAAAATGATAAGGATAGCAAGGA 356
||| ||||| || | ||||| | | |||||||||| | |||| ||||||||||||||
Sbjct 349 AAATCGTCATTTTCTCGAGGAGTTGTA-ATAAAATTTAGAGATGAGAAGGATAGCAAGGA 407
Query 357 TTTTTGTGAGTCCTTTCAAGAGTGGAGAAAGGATGCTGTTGTT---CAAGGATCATCCTT 413
|||||||| || ||| | || || | |||||||| || |||| ||||||||| ||||
Sbjct 408 GTTTTGTGATTCATTTGAGGAATGTAAAAAGGATGATGCTGTTAAACAAGGATCAGCCTT 467
Query 414 TCAAAATGGAAC-G--GTTTCAGCTAATAAAAGCAAGTTCGA-CACTAAGATAGAGGCGT 469
| || ||||| | |||||||||||||||||||||||||| | |||||| ||||| |
Sbjct 468 GCCGAACGGAACAGTTGTTTCAGCTAATAAAAGCAAGTTCGATGA-TAAGATTGAGGC-T 525
Query 470 -CATCGGCCAAAATGTATTTCCATTATTATGGACAACTTCTACATCAACAAAATATGCTA 528
| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 526 GCTTCAGCCAAAATGTATTTCCATTATTATGGACAACTTTTACATCAGCAAAATATGCTA 585
Query 529 CAAGATTATGTGAGGACAGGTACATATTATGCCGCAGTCATGGAGAATCGTTCAGATTTT 588
|| |||||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||
Sbjct 586 CAGGATTATGTGAGGACGGGTACATATCATGCTGCAGTCATGGAGAACCGTTCAGATTTT 645
Query 589 GCTGGTCGTGTTGTGGTCGATGTGGGTGCTGGGAGTGGCATTTTGTCAATGTTTGCTGCC 648
|||| |||||||| |||||||| || ||||| ||||| ||||||||||||||||||||
Sbjct 646 TCTGGCCGTGTTGTTGTCGATGTAGGCGCTGGTAGTGGAATTTTGTCAATGTTTGCTGCA 705
Query 649 CAGGCTGGTGCCAAACATGTGTATGCGGTTGAAGCATCAGAAATGGCTGAGTATGCTCGT 708
| |||||||||||| ||||||||||| || || || |||||||||||||| ||||| |||
Sbjct 706 CTGGCTGGTGCCAAGCATGTGTATGCTGTGGAGGCGTCAGAAATGGCTGAATATGCCCGT 765
Query 709 AAGCTGATTGCTGGAAACCCATTA-TTCGCTGA-ACGGATCACAGTCATCAAGGGTAAAG 766
|| |||||||||||||||||||| || ||||| | ||||||||||||||||||| |||
Sbjct 766 AAACTGATTGCTGGAAACCCATTGCTT-GCTGAGA-GGATCACAGTCATCAAGGGAAAAA 823
Query 767 TTGAGGATATCGAGTTGCCTGAGAAAGCAGATATTTTGATCTCTGAACCGATGGGCACCT 826
|||||||||| |||||||||||||| || ||| |||||||||||||||| |||||||||
Sbjct 824 TTGAGGATATTGAGTTGCCTGAGAAGGCCGATGTTTTGATCTCTGAACCAATGGGCACCC 883
Query 827 TATTGGTCAACGAGAGAATGTTAGAATCGTATGTAATTGCTAGGGATCGTTTTATGTCTT 886
|||||||||| ||||| ||| | ||| | ||||| |||||||||||||||||| |||||
Sbjct 884 TATTGGTCAATGAGAGGATGCTGGAAACATATGTTATTGCTAGGGATCGTTTTCTGTCTC 943
Query 887 CAAAGGGCAAAATGTTTCCCACTGTCGGAAGGATTCACATGGCACCTTTTTCTGATGAAT 946
|||| || ||||||||||| || || |||||||| |||||||||||||| | |||||||
Sbjct 944 CAAACGGAAAAATGTTTCCGACGGTTGGAAGGATCCACATGGCACCTTTCGCCGATGAAT 1003
Query 947 TCTTATTTATTGAGATGGCAAATAAGGCTATGTTTTGGCAACAGCAGAACTATTATGGAG 1006
|||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1004 TCTTATTTGTTGAAATGGCAAATAAGGCTTTGTTTTGGCAACAACAGAACTATTATGGAG 1063
Query 1007 TTGATCTGACACCTCTATATGGATCAGCACACCAAGGTTATTTTTCTCAGCCCGTTGTTG 1066
||||| ||||||||||||||| |||||| ||||| ||||||||||| |||||||| ||||
Sbjct 1064 TTGATTTGACACCTCTATATGTATCAGCCCACCAGGGTTATTTTTCCCAGCCCGTGGTTG 1123
Query 1067 ATGCATTTGATCCGAGATTATTAGTGGCTTC-TCCGATGTTTCACATGATAGATTTCACT 1125
|||||||||||||||||||||| |||||| | || ||||||||| ||||||||||||||
Sbjct 1124 ATGCATTTGATCCGAGATTATTGGTGGCTCCCTC-GATGTTTCATGTGATAGATTTCACT 1182
Query 1126 CAA-ATGAAGGAAGAAGATTTTTACGAGATTGATATCCCGTTGAAGTTCACTGCTTCCAT 1184
| |||| ||||||| | ||||| ||||||||||||||||||||||||||||| || |
Sbjct 1183 -ATGATGACGGAAGAACAATTTTATGAGATTGATATCCCGTTGAAGTTCACTGCGTCTGT 1241
Query 1185 GTGCACCAGAGTGCATGGACTTGCCTGCTGGTTCGACGTTCTCTTCGACGGGAGCACGGT 1244
||| |||||| | ||||||||||| |||||||| || |||||||| ||||||||||||||
Sbjct 1242 GTGTACCAGAATTCATGGACTTGCGTGCTGGTTTGATGTTCTCTTTGACGGGAGCACGGT 1301
Query 1245 CCAAAGATGGCTCACAACTGCTCCTGGTGCACCTACAACGCATTGGTACCAAATCAGATA 1304
||||||||| | ||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct 1302 GCAAAGATGGTTTACAACTGCTCCCGGTGCACCAACAACCCATTGGTACCAAATAAGATG 1361
Query 1305 TGTTCTCTCGCAGCCTATTTACGTAATGGCAGGTCAAGAGATCACTGGTAGACTTCATTT 1364
||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||
Sbjct 1362 TGTTCTCTCGCAGCCTATTCACGTCATGGCAGGGCAAGAGATCACTGGTAGACTTCATTT 1421
Query 1365 GATAGCCCACAGTGCTCAGAGTTACACCATAGATCTAACTTTATCAGCTAAAATGTGGGG 1424
||| ||||||||||||||||||||||| ||| ||||||| | |||||||||||||||||
Sbjct 1422 GATTGCCCACAGTGCTCAGAGTTACACTATAAATCTAACACTCTCAGCTAAAATGTGGGG 1481
Query 1425 TCCCGGTGC-AAGTCAAGGTGGAATTCTCCA-ATCATCGA-CATGCAAATTCGATCTGAA 1481
||||||||| || |||||||||||| ||||| | |||| | | |||||| ||||||||||
Sbjct 1482 TCCCGGTGCCAA-TCAAGGTGGAATCCTCCAGA-CATC-ATCGTGCAAACTCGATCTGAA 1538
Query 1482 AGAACCTTATTATAGAATGTCTCAGCCACAAGCATACCCTGTTGCACAAGAACCACC 1538
||||| ||||||||||||||||||||||| | |||||| |||| ||||||||
Sbjct 1539 GGAACCCTATTATAGAATGTCTCAGCCACAGGTTTACCCTA---CACAGGAACCACC 1592
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95581837680
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5