BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478121
Length=1411
Score E
Sequences producing significant alignments: (Bits) Value
AT3G07830.1 | Symbols: | Pectin lyase-like superfamily protein... 2191 0.0
AT3G07840.1 | Symbols: | Pectin lyase-like superfamily protein... 1184 0.0
AT3G07820.1 | Symbols: | Pectin lyase-like superfamily protein... 1110 0.0
> AT3G07830.1 | Symbols: | Pectin lyase-like superfamily protein
| chr3:2499243-2501021 REVERSE LENGTH=1460
Length=1460
Score = 2191 bits (1186), Expect = 0.0
Identities = 1345/1419 (95%), Gaps = 21/1419 (1%)
Strand=Plus/Plus
Query 1 AATGGGTTCATATTTCGGAATTTCTACAATTTTCGTAATATGTTTGCTGGGATTTTCAGC 60
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 55 AATGGGTTCATATTTTGGAATTTCTACAATTTTCGTGATATGTTTGCTGGGATTTTCAGC 114
Query 61 CAATG--C-TGAGGTGTTTAGAATT-GGTTCTTCTCCAGGTTCTGATATTACGCAGGCAC 116
||||| | ||||||| ||||| || | ||||||||||||||||||||||||||||| |
Sbjct 115 CAATGCTCATGAGGTGCTTAGACTTACG-TCTTCTCCAGGTTCTGATATTACGCAGGCGC 173
Query 117 TTCTGAGAGCATTCACATCAGCATGCCAAGCTCCGACACCGAGCAAGGTGGTGATCCCAA 176
||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||||||||
Sbjct 174 TTCTGAGAGCATTCACAACGGCATGCCAATCTCCGACACCGAGGAAGGTGGTGATCCCAA 233
Query 177 AAGGACAGTTCAGGCTTGGTGAGATCATGATGACGGGTCCATGCAAATCTCCAGTGGAGA 236
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 234 AAGGACAGTTCAAGCTTGGTGAGATCATGATGTCGGGTCCATGCAAATCTCCAGTCGAGA 293
Query 237 TAACCCTGCAAGGCACTGTCCTTGCTGACGGAAACTCGATCCATGGAAAGGAAAAATGGG 296
| ||| ||| |||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 294 TCACCTTGCTAGGCACTGTCCTCGCTGACGGAAACTCGATCCATGGAAAAGAAAAATGGG 353
Query 297 TCGTGTTCCAAAGAATGGATGGGTTTAGGTTGAACGGAGGTGGAACTTTCGACGGTGAAG 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 354 TCGTGTTCCAAAGAATGGATGGGTTCAGGTTGAACGGAGGTGGAACTTTCGACGGTGAAG 413
Query 357 GTAACGCAGCTTGGAGGGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCCA 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 414 GTAACGCAGCTTGGAGGGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCCA 473
Query 417 TCGTAAGCATAAGGTTTGATTTCGTGACGAACGCTGAGATCAGAGACATATCCTCAATCG 476
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 TC---AGTATAAGGTTTGATTTCGTGACGAACGCTGAGATCAGAGACATATCCTCAATCG 530
Query 477 ATGCCAAGAACTTTCACATCAACGTGATAGGCGCCAAGAACATGACCTTTAACAACGTCA 536
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 531 ATGCCAAGAACTTTCACATCAACGTGATTGGCGCCAAGAACATGACCTTTGACAACGTCA 590
Query 537 AGATCATGGCTCCAGCAGAGAGCCCCAACACTGACGGGATCCACTTGGGAAGAAGTGTCG 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 AGATCATGGCTCCAGCAGAGAGCCCCAACACTGACGGGATCCACTTGGGAAGAAGTGTCG 650
Query 597 GGGTCTCGATTATCAACTCTAGGATCGCCACCGGAGATGACTGTGTCTCCGTCGGGGACG 656
||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 651 GGGTCTCCATTATCAACTCTAGGATCTCCACCGGAGATGACTGTGTCTCTGTCGGGGACG 710
Query 657 GGATGGTGAATCTTCTCGTGAAGAACGTCGTGTGTGGTCCTGGACACGGGATCAGTGTGG 716
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 711 GGATGGTGAATCTTCTAGTTAAGAACGTCGTGTGTGGTCCTGGACACGGGATCAGTGTTG 770
Query 717 GAAGCCTTGGAAGGTACGGACACGAGCAGGACGTCAGCGGCATTAGGGTCATCAACTGCA 776
|||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct 771 GAAGCCTTGGAAGGTACGGACATGAACAGGACGTCAGCGGCATTAGGGTCATCAATTGCA 830
Query 777 CCCTCCAGGAGACTGACAACGGCCTCAGGATCAAGACTTGGCCCTCTGCAGCTTGTTCCA 836
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 831 CCCTCCAGGAGACTGACAATGGCCTCAGGATCAAGACTTGGCCCTCTGCAGCTTGCTCCA 890
Query 837 CCACTGCCTCCAATATTCATTTTGAGAATATCATCCTTAGAAACGTTAGTAACCCAATCC 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 891 CCACTGCCTCCAATATTCATTTTGAGAATATCATCCTTAGAAACGTTAGTAACCCAATCC 950
Query 897 TCATCGACCAAGAGTACTGTCCCTGGAACCAGTGCAACAAGCAGAAATCATCATCCATTA 956
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 951 TCATCGACCAAGAGTACTGTCCTTGGAACCAGTGCAACAAGCAGAAATCATCATCCATTA 1010
Query 957 AGCTGGCAAACATAAGCTTCAAGAGGATTAGAGGGACATCAGGGAACAAGGACGCAGTGA 1016
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 1011 AGCTGGCAAACATAAGCTTCAGGAGGATTAGAGGGACATCAGGGAACAAAGACGCAGTGA 1070
Query 1017 AGCTGTTGTGCAGCAAGGGATATCCGTGTGAGAACGTTCAGGTTGGAGACATTAATATTC 1076
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071 AGCTATTGTGCAGCAAGGGATATCCGTGTGAGAACGTTCAGGTTGGAGACATTAATATTC 1130
Query 1077 AGTACACTGGAGCCGATGGTCCAGCCACCTTCATGTGCTCAAACGTAAGGCCTAAGCTTG 1136
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1131 AGTACACTGGAGCCGATGGTCCAGCCACCTTCATGTGCTCAAACGTAAGGCCTAAGCTAG 1190
Query 1137 TTGGAACTCAGTTCCCAAAGGCTTGTAACACACCACCCGTGTTGACCCAACCTAAGTAAA 1196
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1191 TTGGAACTCAGTTCCCAAAGGCTTGTAACACACCACCCGTGCTGACCCAACCTAAGTAAA 1250
Query 1197 ATGTAGAAAGCTCACAACAATATTTAGGAATTTCTCATCCAATTTTTCTTCAATCTTAGA 1256
|||||||||| || || || |||||||||||||||||||| |||||||||||||||||
Sbjct 1251 ATGTAGAAAGTTCTCAT-AACATTTAGGAATTTCTCATCCATTTTTTCTTCAATCTTAG- 1308
Query 1257 TTTTTTCCCAAAGTCACACAAGGGAGATTTA----ATTTAAAAAGCTGTAAAAGAATTTT 1312
||||| ||||| |||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 1309 TTTTT-CCCAATGTCACACAAGGGAGATTTCTTTTATTTAAAAA-CTGTAAAAGAATTTT 1366
Query 1313 GTTTCACttttttttttttttATTTGATGCCAACACATATACATAGATGTGTGTGTGCAT 1372
|||||||||||| ||| ||| |||||||||||| ||||||||||||||||| ||||
Sbjct 1367 GTTTCACTTTTTATTTGTTT-----GATGCCAACACAAATACATAGATGTGTGTGCGCAT 1421
Query 1373 ATATGAATGCAATAAAACCAAAAAGATACAGGTTAATTT 1411
|||||||||||||||||| |||||||| ||||||| |||
Sbjct 1422 ATATGAATGCAATAAAACTAAAAAGATGCAGGTTATTTT 1460
> AT3G07840.1 | Symbols: | Pectin lyase-like superfamily protein
| chr3:2501893-2503565 REVERSE LENGTH=1296
Length=1296
Score = 1184 bits (641), Expect = 0.0
Identities = 1007/1181 (85%), Gaps = 36/1181 (3%)
Strand=Plus/Plus
Query 1 AATGGGTTCATATTTCGGAATTTCTACA---ATTTTCGTAATATGTTTGCTGGGATTTTC 57
||||||||||||||| ||||||||| || |||||||||||| |||||||||||||||
Sbjct 90 AATGGGTTCATATTTAGGAATTTCTGCAGTTCTTTTCGTAATATCTTTGCTGGGATTTTC 149
Query 58 AGCCAATGCTGAGGTGTTTAGA-ATTGGTTCTTCTCCAGGTTCTGATATTACGCAGGCAC 116
|||||||||||||||||| | | ||||| ||||||||||||||||||||| |||||||
Sbjct 150 AGCCAATGCTGAGGTGTTCA-ACGTTGGTGGTTCTCCAGGTTCTGATATTACTCAGGCAC 208
Query 117 TTCTGAGAGCATTCACATCAGCATGCCAAGCTCCGACACCGAGCAAGGTGGTGATCCCAA 176
|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 209 TTCTGAAAGCATTCACATCAGCATGCCAAGCTCCGACAGCGAGCAAGGTGGTGATCACAA 268
Query 177 AAGGACAGTTCAGGCTTGGTGAGATC-ATGATGACGGGTCCATGCAAATCTCCAGTGGAG 235
| || |||||| ||||||||||||| | ||||||||| ||||||||| ||||||| |||
Sbjct 269 AGGGTGAGTTCAAGCTTGGTGAGATCGA-GATGACGGGCCCATGCAAAGCTCCAGTCGAG 327
Query 236 AT-AACCCTGCAAGGCACTGTCCTTGCTGACGGAAACTCGATCCATGGAAAGGAAAAATG 294
|| || ||| ||||| ||| || ||||| ||||| | ||||| || ||||||| |||
Sbjct 328 ATCAA-CCTCCAAGGTACTCTCAAAGCTGATGGAAAAGCTATCCAGGGGAAGGAAAGATG 386
Query 295 GGTCGTGTTCCAAAGAATGGATGGGTTTAGGTTGAACGGAGGTGGAACT-TTCGACGGTG 353
|||||| |||| |||||| |||| |||| ||| ||||||||||||| | ||||||||||
Sbjct 387 GGTCGTCTTCCTAAGAATTAATGGCTTTAAGTTAAACGGAGGTGGAA-TCTTCGACGGTG 445
Query 354 AAGGTAACGCAGCTTGGAGGGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTC 413
|||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 446 AAGGCAATGCAGCTTGGAGAGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTC 505
Query 414 CCATCGTAAGCATAAGGTTTGATTTCGTG-ACGAACGCTGAGATCAGAGACATATCCTCA 472
||||| | | |||||||||||||||||| | ||| |||||||| ||||||||||||||
Sbjct 506 CCATC--A-GTATAAGGTTTGATTTCGTGGA-GAATGCTGAGATTAGAGACATATCCTCG 561
Query 473 ATCGATGCCAAGAACTTTCACATCAACGTGATAGGCGCCAAGAACATGACCTTTAACAAC 532
|| ||||| |||||||| ||||| ||||| | ||||||||||||||||||||| | |||
Sbjct 562 ATAGATGCTAAGAACTTCCACATAAACGTTCTCGGCGCCAAGAACATGACCTTTGATAAC 621
Query 533 GTCAAGATCATGGCTCCAGCAGAGAGCCCCAACACTGACGGGATCCACTTGGGAAGAAGT 592
|||||| |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 622 GTCAAGGTCATCGCTCCGGCAGAGAGCCCCAACACTGACGGTATCCATTTGGGAAGAAGT 681
Query 593 GTCGGGGTCTCGATTATCAACTCTAGGATCGCCACCGGAGATGACTGTGTCTCCGTCGGG 652
| || ||| ||| ||||||||| ||| ||||||||||||||||| |||| || |||
Sbjct 682 GAAGGAGTCAAGATCCTCAACTCTAAGATAGCCACCGGAGATGACTGCATCTCTGTTGGG 741
Query 653 GACGGGATGGTGAATCTTCTCGT-GAAGAACGTCGTGTGTGGTCCTGGACACGGGATCAG 711
|| |||||| ||| || | ||| || |||||| |||| |||||||||||||| |||||
Sbjct 742 GATGGGATGAAGAACCTCCACGTCGA-GAACGTTATGTGCGGTCCTGGACACGGAATCAG 800
Query 712 TGT-GGGAAGCCTTGGAAGGTACG-GACACGAGCAGGACGTCAGC-GGCATTAGGGTCAT 768
||| |||| | ||||||||||||| | || ||||| || |||| | ||||||| ||| |
Sbjct 801 TGTCGGGA-GTCTTGGAAGGTACGTG-CATGAGCAAGATGTCA-CAGGCATTACTGTCGT 857
Query 769 CAACTGCACCCTCCAGGAGA-CTGACAACGGCCTCAGGATCAAGACTTGGCCCTCTGCAG 827
||||||||||| |||| || ||||||| || || ||||||||||| ||||| ||||| |
Sbjct 858 GAACTGCACCCTTCAGG-GAACTGACAATGGGCTAAGGATCAAGACATGGCCATCTGCGG 916
Query 828 CTTGTTCCACCACTGCCTCCAATATTCATTTTGAGAATATCATCCTTAGA-AACGTTAGT 886
|||| ||||||| ||||| ||||||||||||||| |||||||||| | ||||||||
Sbjct 917 CTTGCGCCACCACCGCCTCTGGTATTCATTTTGAGAACATCATCCTTA-ACAACGTTAGC 975
Query 887 AACCCAATCCTCATCGACCAAGAGTACTGTCCCT-GGAACCAGTGCAACAAGCAGAAATC 945
|||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||| |
Sbjct 976 AACCCAATCCTCATTGACCAGGAGTACTG-CCCTTGGAACCAGTGCAACAAGCAGAAACC 1034
Query 946 ATC-ATCCATTAAGCTGGCAAACATAAGCTTCAAGAGGATTAGAGGGACATCAGGGAACA 1004
||| | | |||||||||| ||||||||||||||| |||||||| |||||||||||||
Sbjct 1035 ATCGA-CGATTAAGCTGGTGGACATAAGCTTCAAGAATATTAGAGGAACATCAGGGAACA 1093
Query 1005 AGGACGCAGTGAAGCTGTTGTGCAGCAAGG-GATATCCGTGTGAGAACGTTCAGGTTGGA 1063
|||||||||||||||| ||||||||||||| | |||| |||| ||| ||| || |||||
Sbjct 1094 AGGACGCAGTGAAGCTATTGTGCAGCAAGGCGC-ATCCATGTGCGAATGTTGAGATTGGA 1152
Query 1064 GACATTAATATTCAGTACACTGGAGCCGATGGTCCAGCC-ACCTTCATGTGCTCAAACGT 1122
||||||| || |||||| ||||||||||||||| || || |||||||||||||||||
Sbjct 1153 AACATTAACCTTGAGTACAAGGGAGCCGATGGTCCA-CCGACTTTCATGTGCTCAAACGT 1211
Query 1123 AAGGCCTAAGCTTGTTGGAACTCAGTTCCCAAAGGCTTGTA 1163
||||||||||| ||||||||| ||| ||||||||||
Sbjct 1212 TTCCCCTAAGCTTGTGGGAACTCAGAACCCGAAGGCTTGTA 1252
> AT3G07820.1 | Symbols: | Pectin lyase-like superfamily protein
| chr3:2496440-2498095 REVERSE LENGTH=1400
Length=1400
Score = 1110 bits (601), Expect = 0.0
Identities = 961/1134 (85%), Gaps = 27/1134 (2%)
Strand=Plus/Plus
Query 1 AATGGGTTCATATTTCGGAATTTCTACAATTTTCGTAATATGTTTGCTGGGATTTTCAGC 60
||||||| |||||| ||| ||||||||||||| | || |||||| ||||| |||||||
Sbjct 67 AATGGGTGGATATTTTGGAGTTTCTACAATTTTTATTATCTGTTTGTTGGGAATTTCAGC 126
Query 61 CAATGCTGAGGTGTTTAGAATTGGTTCTTC-TCCAGGTTCTGATATTACGCAGGCACTTC 119
|||||||||||| || | ||||||||||| | |||||||||||||||| ||||||||||
Sbjct 127 CAATGCTGAGGTATTCACCATTGGTTCTTCAT-CAGGTTCTGATATTACTCAGGCACTTC 185
Query 120 TGAGAGCATTCACATCAGCATGCCAAGCTCCGACACCGAGCAAGGTGGTGATCCCAAAAG 179
||| |||||||||||| ||||||||| || || |||| ||||| ||||||||||||||||
Sbjct 186 TGAAAGCATTCACATCGGCATGCCAATCTTCGTCACCAAGCAAAGTGGTGATCCCAAAAG 245
Query 180 GACAGTTCAGGCTTGGTGAGATC-ATGATGACGGGTCCATGCAAATCT-CCAGTGGAGAT 237
|| |||||| ||||||||||||| | ||||| ||||||||||||| || ||| | ||| |
Sbjct 246 GAGAGTTCAAGCTTGGTGAGATCGA-GATGAGGGGTCCATGCAAAGCTCCCA-TTGAGGT 303
Query 238 AACCCTGCAAGGCACTGTCCTTGCTGACGGAAACTCGATCCATGGAAAGGAAAAATGGGT 297
||||| ||||| |||||| |||||||| ||| | ||||| || ||||||||||||||
Sbjct 304 CACCCTTCAAGGTACTGTCAAAGCTGACGGTAACGCTATCCAAGGGAAGGAAAAATGGGT 363
Query 298 CGTGTTC--CAAAGAATGGATGGGTTTAGGTTGAACGGAGGTGGAACTTTCGACGGTGAA 355
||| ||| | || || ||||| |||| |||||||||||| ||| | ||||||||||||
Sbjct 364 CGTCTTCGGC-AA-CATTGATGGCTTTAAGTTGAACGGAGGAGGAGCCTTCGACGGTGAA 421
Query 356 GGTAACGCAGCTTGGAGGGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCC 415
|| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 GGCAATGCAGCTTGGAGAGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCC 481
Query 416 ATCGTAAGCATAAGGTTTGATTTCGTGAC-GAACGCTGAGATCAGAGACATATCCTCAAT 474
||| | | ||||||||||| ||| | | |||| |||||||||||||||||||||| ||
Sbjct 482 ATC--A-GTATAAGGTTTGACTTCAT-ATTGAACTCTGAGATCAGAGACATATCCTCGAT 537
Query 475 CGATGCCAAGAACTTTCACATCAACGTGATAGGCGCCAAGAACATGACCTTTAACAACGT 534
||||||||||||||| |||||||||||| | || ||||||||||||||| | || ||| |
Sbjct 538 CGATGCCAAGAACTTCCACATCAACGTGTTGGGAGCCAAGAACATGACCATGAATAACAT 597
Query 535 CAAGATCATGGCTCCAGCAGAGAGCCCCAACACTGACGGGATCCACTTGGGAAGAAGTGT 594
||||||| | || |||| ||| || ||||||||||| || ||||| |||||||||||||
Sbjct 598 CAAGATCGTCGCCCCAGAAGACAGTCCCAACACTGATGGAATCCATTTGGGAAGAAGTGA 657
Query 595 CGGGGTCTCGATTATCAACTCTAGGATCGCCACCGGAGATGACTGTGTCTCCGTCGGGGA 654
||| ||| ||| | |||||| ||| |||||||||| || ||| |||||||||| ||
Sbjct 658 CGGAGTCAAGATCCTTAACTCTTTCATCTCCACCGGAGACGATTGTATCTCCGTCGGAGA 717
Query 655 CGGGATGGTGAATCTTCTCGTGAAGAACGTCGTGTGTGGTCCTGGACACGGGATCAGTGT 714
|||||| ||| |||| |||| |||| ||| || ||||| |||||||| ||||||||
Sbjct 718 TGGGATGAAGAACCTTCACGTGGAGAAGGTCACATGCGGTCCGGGACACGGAATCAGTGT 777
Query 715 -GGGAAGCCTTGGAAGGTACGGACACGAGCAGGACGTCAGCGGCATTAGGGTCATCAACT 773
|||| | ||||||||||||||||||||||| || ||||||||||||| |||||||||||
Sbjct 778 CGGGA-GTCTTGGAAGGTACGGACACGAGCAAGATGTCAGCGGCATTAAGGTCATCAACT 836
Query 774 GCACCCTCCAGGAGACTGACAACGGCCTCAGGATCAAGACTTGGCCCTCTGCAGCTTGTT 833
|||| || || |||||||||||||| | ||||||||||| ||||||||||||||||| |
Sbjct 837 GCACTCTTCAAGAGACTGACAACGGGTTGAGGATCAAGACATGGCCCTCTGCAGCTTGCT 896
Query 834 CCACCACTGCCTCCAATATTCATTTTGAGAATATCATCCTTA-GAAACGTTAGTAACCCA 892
||||||| || ||| |||||||||| ||| |||| ||||| | | | |||||| ||||||
Sbjct 897 CCACCACCGCATCCGATATTCATTTCGAGGATATTATCCTCAAGGA-CGTTAGCAACCCA 955
Query 893 ATCCTCATCGACCAAGAGTACTGTCCCT-GGAACCAGTGCAACAAGCAGAAATCATCATC 951
||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||| |
Sbjct 956 ATCCTCATCGACCAAGAGTACTG-CCCTTGGAACCAGTGCAACAAGCAAAAAGCATCAAC 1014
Query 952 CATTAAGCTGGCAAACATAAGCTTCAAGAGGATTAGAGGGACATCAGGGAACAAGGACGC 1011
|||||| ||| ||||| |||||||||| || ||||| ||||||||||||||||||||
Sbjct 1015 AATTAAGTTGGTGAACATTAGCTTCAAGAACATCAGAGGAACATCAGGGAACAAGGACGC 1074
Query 1012 AGTGAAGCTG-TTGTGCAGCAAGGGATATCCGTGTGAGAACGTTCAGGTTGGAGACATTA 1070
|||||||| || ||||||||||| |||||||| ||||||| || |||||||||||
Sbjct 1075 GGTGAAGCTACTT-TGCAGCAAGGGGTATCCGTGCCAGAACGTGGAGATTGGAGACATTG 1133
Query 1071 ATATTCA-GTACACTGGAGCCGATGGTCCAGCCACCTTC-ATGTGCTCAAACGT 1122
|||| || ||||| |||||| |||||||||||||| ||| || |||||||||||
Sbjct 1134 ATAT-CAAGTACAATGGAGCAGATGGTCCAGCCACTTTCCAT-TGCTCAAACGT 1185
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69527754825
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5