BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478190
Length=2152
Score E
Sequences producing significant alignments: (Bits) Value
AT3G08870.1 | Symbols: | Concanavalin A-like lectin protein ki... 3192 0.0
AT5G01550.1 | Symbols: LECRKA4.2 | lectin receptor kinase a4.1 ... 819 0.0
> AT3G08870.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr3:2700355-2702581 REVERSE LENGTH=2227
Length=2227
Score = 3192 bits (1728), Expect = 0.0
Identities = 2022/2163 (93%), Gaps = 23/2163 (1%)
Strand=Plus/Plus
Query 1 ATGGGCATAGCAAGATCCATAACCTCGTTCATGTTCTTC--C--TCT--TGGTATCATCA 54
|||||||||||||||||||||| |||||||||||||||| | ||| || ||| ||||
Sbjct 1 ATGGGCATAGCAAGATCCATAAACTCGTTCATGTTCTTCTTCTTTCTAATGATATTATCA 60
Query 55 AACTCTGT-TAACAA-TTCTGTTCTTGCTCAGGCCACGACAGCGAAATTCACATTCATAG 112
||| || | ||| || |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 AACGCT-TCTAA-AAGCTCTGTTCTTGCTGAGGCCACGACAGCGAAATTCACATTCATAG 118
Query 113 GTTTCAAAGGAAACCAAACAGAAATTCAAACAGAAGGAGCTTCGACGATCCAACTCGACA 172
||||||||| ||||||||| || |||||||||||||||||||| || ||||||| |||||
Sbjct 119 GTTTCAAAGAAAACCAAACGGATATTCAAACAGAAGGAGCTTCCACAATCCAACACGACA 178
Query 173 ATGATCTTCTGAGACTAACTAATCGGAACCAAAACGTCACTGGAACCGCGTTTTACCGCA 232
|||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 179 ATGATCTTCTTAGACTAACTAATCGGAAACAAAACGTCACTGGAACAGCGTTTTACCGCA 238
Query 233 AACCGATTAGATTGCGTGACTTCACCAATTCCTCCGATATCAAAGTCTGTTCCTTTAGCA 292
|||| || ||||||||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 239 AACCAATCAGATTGCGTGAGTTAACCAATTCCTCCGATATCAAAGTTTGTTCCTTTAGCA 298
Query 293 CTTCTTTCGTGTTCGTCATAATCCCTTCAAGTCCCGG-AACCGGTGGTTTTGGTTTCACG 351
|||||||||| ||||||||| |||||||||||||||| || |||||||||||||||||||
Sbjct 299 CTTCTTTCGTCTTCGTCATACTCCCTTCAAGTCCCGGCAA-CGGTGGTTTTGGTTTCACG 357
Query 352 TTCACACTTTCTCCGACCCCGAATCGTCCTGGAGCCAAATCTGCACAGTACTTGGGGCTT 411
||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||
Sbjct 358 TTCACACTTTCTCCGACCCCGAATCGTCCAGGAGCCGAATCTGCACAGTATTTGGGTCTG 417
Query 412 TTGAACAGAACCAACAACGGTGATCCATCGAATCACGTATTCGCTGTTGAATTCGACATG 471
||||||||||||||||||||| |||||||||||||||||||||| || |||||||||| |
Sbjct 418 TTGAACAGAACCAACAACGGTAATCCATCGAATCACGTATTCGCAGTGGAATTCGACACG 477
Query 472 GTACAAGGATTTAAAGACGGCGCAGACAGAAGAGGAAACCACATCGGTCTTAATTTCAAC 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 GTACAAGGATTTAAAGACGGCGCAGACAGAAGAGGAAACCACATCGGTCTTAATTTCAAC 537
Query 532 AACCTCTCCTCCGATGTACAAGAGCCACTCATTTATTACGACACAGAGGATCGAAAAGAA 591
|||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 538 AACCTCTCCTCCAATGTACAAGAACCACTCATTTACTACGACACAGAGGATCGAAAGGAA 597
Query 592 GATTTTCAGCTCGAGAGCGGCGAACCAATCCGAGTTCTTGTCGATTACGACGGATCCAGC 651
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 598 GATTTTCAGCTCGAGAGCGGCGAACCAATCCGAGTTCTTATCGATTACGACGGATCCAGC 657
Query 652 GAAACCTTAAACGTCACAATCTATCCGACGAGATTAGAGTTTAAACCCAAAAAGCCCCTG 711
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 658 GAAACCTTAAACGTTACAATCTATCCGACGAGATTAGAGTTTAAACCCAAGAAGCCTCTA 717
Query 712 ATCTCGCGGCGAGTTTCAGAGCTGTCGGAGATTGTGGAGGATGAAATGTACGTCGGATTC 771
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 718 ATCTCGCGACGAGTTTCAGAGCTGTCGGAGATTGTGAAGGATGAAATGTACGTCGGATTC 777
Query 772 ACCGCCGCGACTGGAAAAGACCAGTCGAGTGCTCACTATGTAATGGGTTGGAGTTTTTCA 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 ACCGCCGCGACTGGAAAAGACCAGTCGAGTGCTCACTATGTAATGGGTTGGAGTTTTTCA 837
Query 832 AGCTGTGGAGAAAATCCAATGGCGGATTGGCTCGATCCCTCGAAGCTTCCTCTTCCACCT 891
||||| ||||||||||||||||||||||||||||| |||| |||||||| |||||||
Sbjct 838 AGCTGCGGAGAAAATCCAATGGCGGATTGGCTCGAGATCTCGCGGCTTCCTCCTCCACCT 897
Query 892 CGCTTGAGTAACAAGAAAGGTTACGATTCTCAAGTCATTGCTTTGATTGTTGCTTTATCG 951
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 898 CGCTTGAGTAACAAGAAAGGTTACAATTCTCAAGTCATTGTTTTGATTGTTGCTTTATCG 957
Query 952 ATCGTCACATTGGTCTTGCTTGTGTTACTGTTTATATTTGTGATGTACAAAAGGCGAATC 1011
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 958 ATCGTCACACTGGTCTTGCTTGTGTTACTATTTATATTTGTGATGTACAAAAGGCGAATC 1017
Query 1012 CAAGAAGAAGATATTCTAGAGGACTGGGAGATTGATTATCCTCATAGATTCAGATACAGA 1071
||||||||||||| ||||||||| ||||||||||||||||||||||| || |||||||||
Sbjct 1018 CAAGAAGAAGATACTCTAGAGGATTGGGAGATTGATTATCCTCATAGGTTTAGATACAGA 1077
Query 1072 GATCTCTACTTAGCAACGAAGAAATTCAAAGAGAGTGAGATCATCGGTACCGGAGGATTT 1131
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1078 GATCTCTACTTAGCAACGAAGAAATTCAAAGAGAGTGAGATTATCGGTACTGGAGGATTT 1137
Query 1132 GGAATCGTTTACAGAGGAAATCTATCTTCCTCGGGTCCAATCGCAGTGAAGAAGATTACT 1191
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1138 GGAATCGTTTACAGAGGAAATCTATCTTCTTCGGGTCCAATCGCAGTGAAGAAGATAACC 1197
Query 1192 TCAAATAGCTTACATGGTGTTCGAGAATTTGTGGCAGAGATCGAGAGTTTAGGAAGATTA 1251
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1198 TCAAATAGCTTACAAGGTGTTCGAGAATTTATGGCAGAGATCGAGAGTTTAGGAAGATTA 1257
Query 1252 GGTCATAAGAACCTCGTGAATCTTCAAGGATGGTGCAAACACAAGAACGAGCTCTTGTTA 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 GGTCATAAGAACCTCGTGAATCTTCAAGGATGGTGCAAACACAAGAACGAGCTCTTGTTA 1317
Query 1312 ATTTACGATTATATCCCCAACGGAAGCCTTGACGCGCTGCTGTACAAAACGCCGAGAAGA 1371
|||||||||||||| ||||||||||| || ||| || |||||||| ||||||||||||||
Sbjct 1318 ATTTACGATTATATACCCAACGGAAGTCTCGACTCGTTGCTGTACCAAACGCCGAGAAGA 1377
Query 1372 AACGGCGTTGTGTTGCCGTGGGACGTGCGTTTCCAGATCATCAAGGGAATCGCGTCGGGA 1431
|||||| | |||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 1378 AACGGCATCGTGTTGCCGTGGGACGTGCGTTTCGAGATCATAAAGGGAATCGCGTCGGGA 1437
Query 1432 CTGTTGTATCTTCATGAAGAATGGGAACAAATTC-TGGTTCATAGAGATGTGAAAGCGAG 1490
|||||||| |||||||| ||||||||||| || | ||||||||||||| |||||| ||||
Sbjct 1438 CTGTTGTACCTTCATGAGGAATGGGAACAGAT-CGTGGTTCATAGAGACGTGAAACCGAG 1496
Query 1491 CAATGTTCTTATTGATGAAGATATGAACGCTAAATTAGGCGATTTTGGACTCGCTAGGCT 1550
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1497 CAATGTTCTTATTGATGAAGATATGAACGCTAAATTAGGCGATTTTGGACTCGCGAGGCT 1556
Query 1551 TTACGAACGCGGAACCTTAACGCAGACCACGAAAGTCGTTGGGACTTTAGGGTACATGGC 1610
||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 1557 TTATGAACGCGGAACGTTAACGCAGACCACGAAAATCGTTGGCACTTTAGGGTACATGGC 1616
Query 1611 ACCTGAGCTCACACGTAACGGTAAAGGCTCGACAGCGTCTGATGTTTTTGCGTTTGGCGT 1670
||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||||
Sbjct 1617 GCCTGAGCTCACACGTAACGGTAAAGGCTCAACCGCGTCTGACGTTTTCGCGTTTGGCGT 1676
Query 1671 TTTATTGTTGGAAATAGTGTGTGGGAATAAACCAACGAACGCAGAGAACTTCTTCTTAGC 1730
||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1677 TTTGTTGTTAGAAATAGTGTGTGGGAATAAACCAACGAATGCAGAGAACTTCTTCTTAGC 1736
Query 1731 TGATTGGGTAATGGAGTTTCACACTAATGGTGGAATCCTTAGCGCCGTGGATCAGAAACT 1790
||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||||| ||
Sbjct 1737 TGATTGGGTAATGGAATTTCATACTAATGGTGGAATCCTTTGCGTCGTGGATCAGAATCT 1796
Query 1791 CGGATCTAGTTTTAATGGCAGAGAGGCTAAATTAGCTCTTATTGTGGGATTACTCTGTTG 1850
||| |||||||| |||||||||||||||||| |||||||| ||||||| ||||| |||||
Sbjct 1797 CGGGTCTAGTTTCAATGGCAGAGAGGCTAAACTAGCTCTTGTTGTGGGGTTACTATGTTG 1856
Query 1851 CCATCAGAAACCGACATATCGGCCATCGATGAGAATGGTGCTTAGATATCTGAATGGTGA 1910
|||||||||||| | || | ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1857 CCATCAGAAACCAAAATTTAGGCCATCGATGAGAATGGTGCTTAGATATTTGAATGGTGA 1916
Query 1911 AGAGAATGTTCCACAGATTGATGGAAATTGGGGATT-TCCGGGTTCTTCAAGAGACGATC 1969
||||||||||||||||||||||| |||||||||||| || || |||||| ||||||||||
Sbjct 1917 AGAGAATGTTCCACAGATTGATGAAAATTGGGGATTCTC-GGATTCTTCGAGAGACGATC 1975
Query 1970 TTAAAACGAATGTGGTAGGTTATGTTTCGTCCGATAGAGCCTCGAGCTCGAATACTTTTT 2029
|||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1976 ATAAATCGAATGTTGTAGGTTATGTTTCGTCTGATAGAGCCTCGAGCTCGAATACTTTTT 2035
Query 2030 CGTCTTTCTCCGAGGTTTCTTCAAGCTCTATCGTTAGTGGTAGATAGTTTCATTCATAGC 2089
||||||||||| | ||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 2036 CGTCTTTCTCCAATGTTTCTTCAAGCTCTATCGTTAGTGGTAGATAGTTTCAT--A--GC 2091
Query 2090 ACTTTTAGCATAGC--ATT-ATTTTCTAGAAACAGAACATTTTGTATGTATTTACTATTT 2146
|||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 2092 ACTTTTAGCATAGCTTATTTATTTTCTAGAAACAGAACATTTTGTATGTTTTTACTATTT 2151
Query 2147 ATG 2149
|||
Sbjct 2152 ATG 2154
> AT5G01550.1 | Symbols: LECRKA4.2 | lectin receptor kinase a4.1
| chr5:214517-216583 REVERSE LENGTH=2067
Length=2067
Score = 819 bits (443), Expect = 0.0
Identities = 1545/2055 (75%), Gaps = 163/2055 (8%)
Strand=Plus/Plus
Query 111 AGGTTTCAAAGGAAACCAAACAGAA-ATTCAAACAGA-AGGAGCTTCGACGATCCAACTC 168
|||||| | ||||||||| || || ||| ||| | |||||| |||||||| |||||
Sbjct 87 AGGTTTTAGCGGAAACCAATCA-AATATTGTGACA-ACGGGAGCTGCGACGATCAAACTC 144
Query 169 GACAATGATCT-TCTGAGACTAACTAATCGGAAC-CAAAACGTCACTGGAACCGCGTTT- 225
||| || || | |||| || ||| | || ||| | |||||| || || || | |||
Sbjct 145 GAC--GGA-CTAT-TGAGGCTCACTGACCGAAACTC-AAACGTTACCGGTACATC-TTTC 198
Query 226 TACCGCAAACC-GATTAGATTGC--GTGACTTCA-CCAA-TTCCTCCGATA-T-CA-AAG 277
|||| |||||| | | ||||||| | ||| | | ||| |||| | | | | || ||
Sbjct 199 TACCACAAACCTG-TGAGATTGCTGGAGAC-TAATACAAGTTCC-AC-AAACTCCACAA- 253
Query 278 TCTGTTCCTTTAGCACTTCTTTCGTGTTCGTCATAATCCCTTCAAG-TCCCGGAACCGGT 336
|| |||| ||||||||||| ||||| || ||||| |||||| |||| || | || |||
Sbjct 254 TCCGTTCTTTTAGCACTTCCTTCGTATTTGTCATCATCCCTACAAGCTCTAGCAA-CGGA 312
Query 337 GGTTTTGGTTTCACGTTCACACTTTCTCCGACCCC-GAATCGT-CCTGGAGCCAAATCTG 394
|||||||| ||||| ||||| || ||||| ||||| | ||||| || |||||| |||| |
Sbjct 313 GGTTTTGGCTTCACCTTCACGCTATCTCCAACCCCTG-ATCGTACC-GGAGCCGAATCCG 370
Query 395 CACAGTACTTGGGGCTTTTGAACAGAA-CCAACAACGGTG-A-TCCATCGAATCACGTAT 451
||||||||||||| ||| | |||| || | ||| |||| | | || | |||||||||| |
Sbjct 371 CACAGTACTTGGGACTTCTCAACA-AAGCAAACGACGG-GAATTCGA-CGAATCACGTTT 427
Query 452 TCGCTGTTGAATTCGACATGGTACAAGGATTTAAAGACGGCGCAGACAGAAGAGGAAACC 511
| ||||| |||||||||| || ||||| ||||||||||| || || |||| ||| || |
Sbjct 428 TTGCTGTGGAATTCGACACAGTGCAAGGTTTTAAAGACGGTGCCGATAGAACAGGCAATC 487
Query 512 ACATCGGTCTTAATTTCAACAACCTCTCCTCCGATGTACAAGAGCCACTCATTTATTACG 571
|||||||||| |||||||||| | | || ||||| ||||| || || | |||||||
Sbjct 488 ACATCGGTCTGAATTTCAACAGTTTAACATCTGATGTCCAAGAACCGGTCGTGTATTACG 547
Query 572 AC-ACAGAGGA---T---CGAAAAGAAGATTT-TCAGCT-CGAGAGCGGCGAACCAATCC 622
|| || || || | || ||||| ||||| || || | |||| ||||| |||||||
Sbjct 548 ACAAC-GAAGATCCTAACCGGAAAGAGGATTTCCCA-CTAC-AGAGTGGCGATCCAATCC 604
Query 623 GAGTTCTTGTCGATTACGACGGATCCAGC-GAAAC-CTTAAACGTCACAATCTATCCGAC 680
||| || | |||||||| || ||| | |||| | ||||| | || |||| ||| |
Sbjct 605 GAGCAATTTTGGATTACGATGG-GCCAACTCAAACGC-TAAACTTAACTGTCTACCCGGC 662
Query 681 GAGA-TTAG-AGTTTAAACCCAAAAAGCCCCTGATCTCGCGGCGAGTTTCAGAGCTGTCG 738
| | || | ||| || |||| || ||| |||||||||| | ||| || || |||||
Sbjct 663 TA-ACTT-GAAGTCTAGACCCGTAAGGCCTTTGATCTCGCGACCTGTTCCAAAGTTGTCG 720
Query 739 GAGATTGTGGAGGATGAAATGTACGTCGGATTCACCGCCGCGACTGGAAAAGACCAGTCG 798
| || ||| | || |||||||| || |||||||| || || || || | ||| ||||||
Sbjct 721 CAAATCGTGCAAGAAGAAATGTATGTTGGATTCACAGCAGCTACAGGGAGAGATCAGTCG 780
Query 799 AGTGCTCACTATGTAATGGGTTGGAGTTTTTCAAGCTGTGGAGAAAATCCAA-TGGCGGA 857
||||||||||| || ||||| ||||||||||| ||| | || || || || | | ||
Sbjct 781 AGTGCTCACTACGTCATGGGCTGGAGTTTTTCTAGCGGCGGTGATCTTCTAACT-GAAGA 839
Query 858 TTGGCTCGATCC-C-TCGAAGCTTCCTCTTCCACCT-CG--C-TTGAGTAACAAGAAAGG 911
| ||| || || | | ||| ||||||| ||| ||| || | | | || |||| |||
Sbjct 840 TACGCTTGA-CCTCTTGGAA-CTTCCTCGTCCGCCTCCGAACACGGCG-AAGAAGAGAGG 896
Query 912 TTACGATTCTCAAGTCA-TTGCTTTGATTGTTGCTTTATCGATCGTCACATTGGTCTTGC 970
|||| |||||||||| | | ||| |||| || ||| ||||| || ||| || ||||||
Sbjct 897 TTACAATTCTCAAGT-ACTCGCTCTGATCGTAGCTCTATCGGGAGTAACAGTGATCTTGC 955
Query 971 TTGTGTTACTGTTTATATTT-GTGATGTACAA-AAGGCGAATCCAAGAAGAAGATATTCT 1028
||| |||||| || | ||| ||||||||||| || ||| | ||| ||| ||| ||||
Sbjct 956 TTGCGTTACT-CTTCTTTTTCGTGATGTACAAGAA-ACGATTGCAACAAGGAGAGGTTCT 1013
Query 1029 AGAGGACTGGGAGATTGATTATCCTCATAGA-TTCAGATACAGAGATCTCTAC-TTAGCA 1086
|| |||||||| || || ||||||||||| || ||||| | |||||||||| | ||
Sbjct 1014 TGAAGACTGGGAAATCAATCATCCTCATAGACTT-AGATATAAAGATCTCTACGCT-GCT 1071
Query 1087 AC-GAAGAAATTCAAAGAGAGTGA-GATCATCGGTACCGGAGGATTTGGAATCGTTTACA 1144
|| || | |||||| |||| | | ||| |||| || ||||||||||||| ||||| |
Sbjct 1072 ACGGATG-GATTCAAGGAGAAT-AGGATTGTCGGAACTGGAGGATTTGGAACCGTTTTCC 1129
Query 1145 GAGG-AA---ATC-T-ATCTTCCTCGGGTCCAATCGCAGTGAAGAAGATTACTTCAAATA 1198
|||| || ||| | | |||| || | || |||||| ||||||||||| ||| | ||||
Sbjct 1130 GAGGAAACTTATCGTCACCTTCGTCTGATCAAATCGCCGTGAAGAAGATAACTCCGAATA 1189
Query 1199 GCT-TACATGGTGTTCGAGAATTTGTGGCAGAGATCGAGAGTTTAGGAAGATT-AGGTCA 1256
| | | || |||||||||||||| | ||||||||||||||||| || ||||| ||| ||
Sbjct 1190 G-TATGCAAGGTGTTCGAGAATTCATCGCAGAGATCGAGAGTTTGGGGAGATTAAGG-CA 1247
Query 1257 TAAGAACCTCGTGAATCTTCAAGGATGGTGCAAACACAAGAACGAGCTCTTGTTAATTTA 1316
|||||| || || || ||||||||||||||||| || || ||||| ||||||||||||||
Sbjct 1248 TAAGAATCTGGTCAACCTTCAAGGATGGTGCAAGCAAAAAAACGATCTCTTGTTAATTTA 1307
Query 1317 CGATTATATCCCCAACGGAAGCCTT-GACGCGCTGCTGTACAAAACG-CCGAGA-AGAAA 1373
||||||||||| |||||||| ||| ||| ||||||| |||| | | || ||| || |
Sbjct 1308 TGATTATATCCCTAACGGAAG-CTTAGACTCGCTGCTCTACAGTA-GACCAAGACAG-AG 1364
Query 1374 CGGCGTTGTGTTGCCGTGGGACGTGCGTTTCCAGA-T-CATCAAGGGAATCGCGTCGGGA 1431
||| ||||| ||| ||||| ||| ||||| ||| | | | || ||||||||||| ||
Sbjct 1365 CGGTGTTGTTTTGTCGTGGAACGCACGTTTTAAGATTGC-T-AAAGGAATCGCGTCTGGT 1422
Query 1432 CTGTTGTATCTTCATGAAGAATGGGAACAA-ATTCTGGTTCATAGAGATGTGAAAGCGAG 1490
|||||||||| ||||||||||||||| || || || |||| ||||| | ||| | ||
Sbjct 1423 TTGTTGTATCTCCATGAAGAATGGGAA-AAGGTTGTGATTCACAGAGACATAAAACCTAG 1481
Query 1491 CAATGTTCTT-ATTGATGAAGATATGAA-CGCTAAATTAGGCGATTTTGGACTCGCTAGG 1548
||| ||| || ||||| || |||||||| | ||| || || |||||||||||||| |||
Sbjct 1482 CAACGTT-TTGATTGAGGACGATATGAATC-CTAGGTTGGGAGATTTTGGACTCGCGAGG 1539
Query 1549 CTTTACGAACGCGGAACCTTAA-CGCAGACCA-CGAAAGTCGTTGGG-AC-TTTAGGGTA 1604
|||||||||||||| | | || || | || | || ||||| |||| || || |||||
Sbjct 1540 CTTTACGAACGCGG-ATCGCAATCGAACACGACCG-TAGTCG-TGGGCACAATT-GGGTA 1595
Query 1605 CATGGCACCTGAGCTCA-CACGTAACGGTAAAGGC-TCGACAGCGTCTGATGTTTTTGCG 1662
||||||||| ||||| | |||| ||||| ||| | ||| | ||||||||||||||||||
Sbjct 1596 CATGGCACCAGAGCT-AGCACGCAACGGCAAA-TCTTCGTCTGCGTCTGATGTTTTTGCG 1653
Query 1663 TTTGGCGTTTTATTGTTGGAAATAGTGTGTGGGAATAA-ACCAAC-GAACGCAGAGA-AC 1719
||||||||||| || || || ||||| | |||| || ||| || || | ||| || |
Sbjct 1654 TTTGGCGTTTTGTTATTAGAGATAGTCTCCGGGAG-AAGACCGACTGA-CTCAGGGACA- 1710
Query 1720 TTCTTCTTAGCTGATTGGGTAATGGAGTTTCACACTA-ATGGTG-GAATC-CT-TAGCGC 1775
|||||||| || |||||||| ||||| || ||| | | | || | || || | | |||
Sbjct 1711 TTCTTCTTGGCCGATTGGGTTATGGAATTGCACGCGAGA-GGAGAGATTCTCCAT-GCG- 1767
Query 1776 CGTGGATCAGAAACTCGGATCTAGTTTTAATGGCAGA-GAGGCTAAA--TTAGCTCTTAT 1832
||||||| || ||| |||| | ||| | ||| | ||||| | || |||||| |
Sbjct 1768 -GTGGATCCGAGACTTGGATTTGGTTACGACGGC-GTTGAGGC-ACGGCTT-GCTCTTGT 1823
Query 1833 TGTGGGATTACTCTGTTGCCATCAGAA-ACCGACATATCGGCCATCGATGAGAATGGTGC 1891
||||||||| |||||||||||||| || |||||| | |||||| || ||||||| |||||
Sbjct 1824 TGTGGGATTGCTCTGTTGCCATCA-AAGACCGACGTCTCGGCCGTCCATGAGAACGGTGC 1882
Query 1892 TTAGATATCTGAATGGTGAAGA-GAATGTTCCACAGATTGATGGAA--ATTGGGGATT-T 1947
|||| ||| |||| || || || || ||| || | |||||| || ||||||||| |
Sbjct 1883 TTAGGTATTTGAACGGAGATGATGA-TGTACCTGAAATTGAT--AACGATTGGGGATACT 1939
Query 1948 CCGGGTTCTTCAAGA-GACGATCTTAAAA-CGAA-TGTGGTAGGTTATGTTTCGTCCGAT 2004
| || |||||||||| | |||| ||| | | || | || ||| |||||||| || |||
Sbjct 1940 C-GGATTCTTCAAGAAG-CGAT-TTAGGATCCAACTTTGA-AGGATATGTTTCATCGGAT 1995
Query 2005 AGAGCCTCGAGCTCGAATACT-T-TTTCGTCTTTCTCCGAGG-TTTCTTCAAGCTCTATC 2061
|| || |||||||| | | | | |||| || | | | ||| ||||||| || ||| |
Sbjct 1996 AGGGCTTCGAGCTC-AGTCCCATCTTTC-TCCGT-TACAAGGGTTTCTTCTAGTTCTGTT 2052
Query 2062 GTTAGTGGTAGATAG 2076
| ||||||||||||
Sbjct 2053 ATCAGTGGTAGATAG 2067
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106726358670
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5