BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478206 Length=624 Score E Sequences producing significant alignments: (Bits) Value AT3G08980.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family p... 894 0.0 > AT3G08980.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr3:2740808-2742685 FORWARD LENGTH=792 Length=792 Score = 894 bits (484), Expect = 0.0 Identities = 561/596 (94%), Gaps = 14/596 (2%) Strand=Plus/Plus Query 1 ATAGATGGTTCTATGAATTTTGCTGAGAATC-GTTTATTAGATAGGCCATCTTGGACATG 59 |||||||||||||||||| |||||||||||| | |||||| |||||||||||||||||| Sbjct 96 ATAGATGGTTCTATGAATGTTGCTGAGAATCAG-ATATTAGTTAGGCCATCTTGGACATG 154 Query 60 GGAATCCAGAATATTTTATGGCAAGTGGCAAAGAAATCATTCACTGGAAGTATTATAGGG 119 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 155 GGAATCCAGAATATTTTATGGCAAGTGGCGAAGAAATCATTCACTGGAAGTATTATAGGG 214 Query 120 CTTACCATTTCAGATAGATGTTGTAGCGTTGTTCCGGTCAGAGGAGATTCCATGTCTCCC 179 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 215 CTTACCATTTCAGATAGATGTTGTAGCGTTGTTCCAGTGAGAGGAGATTCCATGTCTCCC 274 Query 180 ACATTCAATCCCCAGCGGAATTCTTATTTAGATGATTATGTACTCGTGGACAAATTTTGC 239 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 275 ACATTTAATCCCCAGCGGAATTCTTATTTAGATGATTATGTACTTGTGGACAAATTTTGC 334 Query 240 CTTAAGGATTATAAGTTTGCACGTGGTGATGTTGTAGTGTTCAGCTCTCCGACAAATTTC 299 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 335 CTTAAGGATTACAAGTTTGCGCGTGGTGATGTTGTAGTGTTCAGCTCTCCGACACATTTC 394 Query 300 GGGGATAGATACATAAAGAGGATCGTCGGGATGCCTGGCGAATGGATAAGTAGTTCTCGG 359 || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 395 GGAGATAGATACATAAAGAGGATAGTCGGGATGCCTGGTGAATGGATAAGTAGTTCTCGG 454 Query 360 GATGTGATCAGAGTCCCAGAAGGTCATTGTTGGGTAGAAGGAGATAACAAAACTTCCAGC 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 455 GATGTGATCAGAGTCCCAGAAGGTCATTGTTGGGTAGAAGGAGATAACAAAACTTCCAGC 514 Query 420 TTAGACTCAAGAACCTTTGGCCCTATTCCTTTGGGTTTAATTCAAGGAAGGGTCACTCGT 479 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 515 TTAGACTCAAGATCCTTTGGCCCTATTCCTTTGGGTTTAATTCAAGGAAGGGTCACTCGT 574 Query 480 GTCTTGTGGCCTCCTCAAAGAATAAGCAAGATTGGTC-AGTAAAGCTAATGGAGAAGAAG 538 ||| |||||||||||||||||||||||||||| |||| | ||| |||||||||||| Sbjct 575 GTCATGTGGCCTCCTCAAAGAATAAGCAAGATCGGTCGA-TAATGCTAATGGAGAA---- 629 Query 539 AAGAATGAAAAGGACTTCTCCATGTTCCTCAAGATTTTCTATGGGAACTCTCAAAT 594 |||||||||| ||||||||||||||||||| | ||||||||| |||||||| Sbjct 630 -----TGAAAAGGACGTCTCCATGTTCCTCAAGATCT-CTATGGGAATTCTCAAAT 679 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30090254053 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5