BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478222
Length=2615
Score E
Sequences producing significant alignments: (Bits) Value
AT3G09100.2 | Symbols: | mRNA capping enzyme family protein | ... 3969 0.0
AT5G01290.1 | Symbols: | mRNA capping enzyme family protein | ... 1378 0.0
> AT3G09100.2 | Symbols: | mRNA capping enzyme family protein
| chr3:2787981-2793532 REVERSE LENGTH=2781
Length=2781
Score = 3969 bits (2149), Expect = 0.0
Identities = 2479/2634 (94%), Gaps = 39/2634 (1%)
Strand=Plus/Plus
Query 1 GGTTGATTTCGTAGACATCGACGGAGCTTTCTTGTTTCAAAGAA-TTTGGATGTTGTTTC 59
||| |||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||
Sbjct 124 GGTGGATTTCGTAGGCATCTACGGAGCTTACTTGTTTCAAAGAACCTTGGATGTTGTTTC 183
Query 60 CGATTCGCCGAAAGCTCTGTGTTCTTTAG-TTGGTTGAT-A-ATATT-G-TG-CTTTTCT 113
|||||| |||||||||||||||||||||| ||| | | | ||||| | || | || |
Sbjct 184 CGATTCTCCGAAAGCTCTGTGTTCTTTAGTTTGATACCTCAGATATTGGATGCCCTTGAT 243
Query 114 CATGCCTTCAGATATGACTTAGGTTACAGAGGAAGTAGATGTTAGGTTAA-TGCTGTTCA 172
|| ||| || || | ||| |||||||||||| | |||||||||||| | |||||||
Sbjct 244 -ATAACTT-AGGTA-G-CTT--CTTACAGAGGAAGGATATGTTAGGTTAATTTCTGTTCA 297
Query 173 TTTGCCCTTGAATGGTCGCTACGATGGACTTAAATGCTTCACCCCAACCCGAAGAAGATG 232
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 TTTGCCCTTGGATGGTTGCTACGATGGACTTAAATGCTTCACCCCAACCCGAAGAAGATG 357
Query 233 ACGAACCCTATGTGAGACATTTAGAAGATTATAATTCTCGGGATGACCGGATAGAGTCTG 292
||||||| |||||||||||| ||||||| ||| |||||||||||| |||||||||||||
Sbjct 358 ACGAACCGTATGTGAGACATCTAGAAGACTATTCTTCTCGGGATGAACGGATAGAGTCTG 417
Query 293 CTGTTGAAATCGCAAGATGGGTACGAGAAGAGAGAAAGAAACGAATGAGATATGACAAGC 352
||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 418 CTGTTGAAATCGCTAGACGGGAACGTGAAGAGAGAAAGAAACGAATGAGATATGACAAGC 477
Query 353 CAACACATAACTCGCAGCCAGTTTTCCGTGATCAATATTATCAGAATCGAAATACTAAAG 412
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 478 CAACACATAACTCTCAGCCAGTTTTCCGTGATCAATATTACCAGAATCGAAATACTAAAG 537
Query 413 CTTATGATAGATACAAGATCCCTCAAGGTTGGCTAGACTGCCCTCCTTCTGGGCATGAGA 472
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 538 CTTATGATAGATACAAGATCCCTCAAGGTTGGCTAGACTGCCCTCCTTCTGGGAATGAGA 597
Query 473 TAGGATTCCTTGTTCCTTCCAAAGTTCCCCTGAATGAATCTTACAATAATCATGTACCTC 532
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 598 TAGGATTCCTCGTTCCTTCAAAAGTTCCCCTGAATGAATCTTACAATAATCATGTACCTC 657
Query 533 CTGGAAGTAGATACTCTTTTAAACAGGTGATCCATAACCAGAGGATAGCTGGGAGAAAGC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 CTGGAAGTAGATACTCTTTTAAACAGGTGATCCATAACCAGAGGATAGCTGGGAGAAAGC 717
Query 593 TTGGTCTGGTGATCGATTTGACAAACACAACTCGTTACTATTCTACGACAGACTTGAAGA 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 TTGGTCTGGTGATCGATTTGACAAACACAACTCGTTACTATTCTACGACAGACTTGAAGA 777
Query 653 AAGAAGGCATTAAGCATGTGAAGATTGCATGCAAGGGTCGTGATTCAGTGCCAGATAATG 712
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 778 AAGAAGGCATTAAGCATGTGAAGATTGCATGCAAGGGTCGTGATGCAGTGCCAGATAATG 837
Query 713 TGTCTGTCAATGCGTTTGTCAATGAGGTTAATCAGTTCGTCCTAAATCTAAAACACTCGA 772
|||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 838 TGTCTGTCAACGCATTTGTCAATGAGGTTAATCAGTTTGTCCTAAATCTAAAACACTCGA 897
Query 773 AAAAGTATATTCTCGTCCACTGTACACATGGGCATAATCGGACAGGGTTTATGATAGTTC 832
||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct 898 AAAAGTATATTCTCGTCCATTGTACACATGGACATAATCGGACAGGGTTCATGATAGTTC 957
Query 833 ATTATCTTATGCGATCTTTGCCAATGAATGTTACACAGGCATTGAAAATCTTTTCTGATG 892
||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| ||||
Sbjct 958 ATTATCTCATGCGATCTGGGCCAATGAATGTTACACAGGCTTTGAAAATCTTTTCCGATG 1017
Query 893 CCCGACCACCTGGGATCTATAAACCTGATTATATTGATGCTTTATACTCGTTTTATCACG 952
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1018 CCCGCCCACCTGGGATCTATAAACCAGATTATATTGATGCTTTATACTCGTTTTATCACG 1077
Query 953 AAATAAAACCTGAAAGCGTCATTTGCCCATCAACTCCTGAATGGAAGAGGTCGACTGAAC 1012
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1078 AAATAAAACCTGAAAGCGTCATTTGCCCATCAACTCCTGAATGGAAGAGGTCTACTGAGC 1137
Query 1013 TTGATTTAAATGGTGAAGCTTTGCCAgatgatgatgatgatgatgGCGGTCCAGCTGGCC 1072
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
Sbjct 1138 TTGATTTAAATGGTGAAGCTTTGCCAGATGATGAAGATGATGATGGCGGTCCTGCTGGTC 1197
Query 1073 CTGTGCAATGTTTTCAGGAGGAAAGTCATCCAG-TGGATGTCAAGATGTCAAATGATGAC 1131
|||||||| |||| |||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1198 CTGTGCAAGGTTTCCAGGAGGAAAGTCATC-AGGTGGATGTCAAGATGTCAAATGATGAC 1256
Query 1132 GTTCTAGGTGATGAAATTCCCCCTGACCAGGAGGAAGGTTATCGGCAGTTCTTTTATAAG 1191
||||||||||||||||| ||||| ||||||||||||||||| || || |||||||||| |
Sbjct 1257 GTTCTAGGTGATGAAATACCCCCAGACCAGGAGGAAGGTTACCGCCAATTCTTTTATAGG 1316
Query 1192 ATGCTATCACTGAATATTGGGGGAAGAGGATGTTCACAATTTCCCGGTTCACACCCTGTC 1251
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1317 ATGCTATCACTGAATATTGGGGGAAGAGGATGTTCACAATTTCCAGGTTCACACCCTGTC 1376
Query 1252 TCCTTAAACAGGGAAAATTTGCAACTCTTGAGGCAGCGGTACTATTATGCAACATGGAAA 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 TCCTTAAACAGGGAAAATTTGCAACTCTTGAGGCAGCGGTACTATTATGCAACATGGAAA 1436
Query 1312 GCTGATGGAACGCGATATATGATGCTGCTAACCATAGATGGATGCTATC-TAGTAGATAG 1370
|||||||||||||||||||||||||||||||||| |||||||| || | ||||||||||
Sbjct 1437 GCTGATGGAACGCGATATATGATGCTGCTAACCACCGATGGATGTTA-CATAGTAGATAG 1495
Query 1371 GAGCTTTAGATTCCGGAGGGTACAGATGCGGTTCCCCTTCAGGCACCCAACTGAAGGCAT 1430
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1496 AAGCTTTAGATTCCGGAGGGTACAGATGCGGTTCCCCTTTAGGCACCCAACTGAAGGCAT 1555
Query 1431 ATCTGATAAAGTGCACCATTACACATTGCTTGATGGAGAAATGATAATCGATACCTTGCC 1490
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 1556 ATCTGATAAAGTGCACCATTTCACATTACTTGATGGAGAAATGATAATCGATACCTTGCC 1615
Query 1491 AGATAAACAAAAGCAGGAGAGGAGATACCTAATCTATGACATGGTAGCAATCAACGGCCA 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 AGATAAACAAAAGCAGGAGAGGAGATACCTAATCTATGACATGGTAGCAATCAACGGCCA 1675
Query 1551 ATCAGTTGTAGAGAGGCCTTTCTATGAAAGATGGAAGATGCTCGAGAAGGAGGTGATAGA 1610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1676 ATCAGTTGTAGAGAGGCCTTTCTATGAAAGATGGAAGATGCTCGAGAAGGAGGTGATAGA 1735
Query 1611 CCCCCGTAATCATGAGAAGGCCAGAAGTCATATCTACAGATATGATCTTGAGCCTTTTAG 1670
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1736 CCCCCGTAATCATGAGAAGGCAAGAAGTCATATCTATAGATATGATCTTGAGCCTTTTAG 1795
Query 1671 GGTGCGGAGAAAGGATTTTTGGTTGCTTTCTGCGGTTGAGAAGGTTTTGAAGGGTTTCAT 1730
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 GGTGCGGAGAAAGGATTTCTGGTTGCTTTCTGCGGTTGAGAAGGTTTTGAAGGGTTTCAT 1855
Query 1731 ACCGTCACTTTCACATGAAGCCGACGGCCTAATCTTTCAGGGCTGGGATGATCCTTATGT 1790
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1856 ACCATCACTTTCACATGAAGCCGACGGCCTAATCTTTCAGGGCTGGGATGATCCTTATGT 1915
Query 1791 TCCCCGCACCCATGAAGGTCTGTTGAAGTGGAAGTATCCAGAGATGAACTCGGTTGACTT 1850
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1916 TCCCCGCACCCATGAAGGTCTGTTGAAATGGAAGTATCCAGAGATGAACTCGGTTGACTT 1975
Query 1851 TCTATACGAGCAGGATGAGAGTGGCCGTGGAATGCTCTCCTTGTTTGAAAGAGGGAAGAA 1910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1976 TCTATACGAGCAGGATGAGAGTGGCCGTGGAATGCTCTCCTTGTTTGAAAGAGGGAAGAA 2035
Query 1911 AAAGCATATGGATGGGAATTCTGTTGTTTTTAGAGATGATTCAGACCCTTCCGAGTACTC 1970
||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2036 AAAGCATATGGATGGAAATTCTGTTGTTTTTAGAGATGATTCAGACCCTGCTGAGTACTC 2095
Query 1971 TGGGAAGATTGTAGAATGTTCTTGGGATCAGGATGAGAAAGTCTGGGTAAGCATGCGGGT 2030
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2096 TGGGAAGATTGTAGAGTGTTCTTGGGATCAGGATGAGAAAGTCTGGGTAAGCATGCGGGT 2155
Query 2031 CAGGGTCGATAAATCAACGCCTAATGATATCAACACTTACAGAAAGGTGATGAGAAGCAT 2090
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 2156 CAGGGTCGATAAATCAACGCCAAATGATATCAACACTTTCAGAAAGGTGATGAGAAGCAT 2215
Query 2091 CAAGGACAACATCACAGAGGAAGTGTTGCTGCAGGAGATAAGGGAGATAATCCGTTTGCC 2150
|||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||
Sbjct 2216 AAAGGACAACATCACAGAGGAAGTGCTACTGCAGGAGATAAGGGAGATCATCCGTTTGCC 2275
Query 2151 TATGTATGCGGACCGTATCCAAATGGATAGCAAAGCTGCGCGTCGCAGATGAAACAATGT 2210
|||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| ||
Sbjct 2276 TATGTATGCGGATCGTATTCAAATGGATAGCAAAGCTGCGCGCCGCAGATGAAAC---GT 2332
Query 2211 CTGTTTGTTTCTCTCAATATATACTAGAAGCTGAG-CAAGAAAAAGGACACCTGTGGATT 2269
||||||||||||||||||||| | |||||||||| |||||||||| ||| | ||| ||
Sbjct 2333 CTGTTTGTTTCTCTCAATATACCCAAGAAGCTGAGTCAAGAAAAAG-ACATGTCTGGGTT 2391
Query 2270 GGCGGTAATGCTTTTGCTTCTCTTCTTTGCAAATCCTGGG-TGCTTCTATACTCTAACAC 2328
||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||
Sbjct 2392 GGCAGTAATGCTTTTGCTTCTCTTCTTTGCAAATCCCGGGGTGCTTCTATACT--AACAT 2449
Query 2329 TGTACGTACGTAAG-AAGAAAGAAGGAACTCTGCATTTCTCGAATGTGTAAGAATCCCGG 2387
|||||||| | ||| || ||| ||| ||| ||||||||||||||||||||||||||||||
Sbjct 2450 TGTACGTAAG-AAGGAAAAAAAAAG-AACGCTGCATTTCTCGAATGTGTAAGAATCCCGG 2507
Query 2388 TTCCGAGGAGGTTTTAGGGT---TT-ATTATGAATCAAGATCCCGTTTGGGA-TATGTGA 2442
|| | ||||||||||||||| || |||||||||||| || ||||||||| |||||||
Sbjct 2508 TTTCAAGGAGGTTTTAGGGTGGGTTTATTATGAATCAAAATTCCGTTTGGGGGTATGTGA 2567
Query 2443 TGATGGTTTTAGCTTTGATAAGGTGTGTTTACTCTTCTAAGTGATTCATATGTTTAGATG 2502
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2568 TGATGGTTTTAGCTT-GATAAGATGTGTTTACTCTTCTAAGTGATTCATATGTTTAGATG 2626
Query 2503 AAGAAGGTGTTTGTAATAGTACAAGTAATAGTACTTAGGA-TGTTGTAATCTTTTAGTAT 2561
||| | ||||||||||| ||| || |||||||||||||| |||||||||||||||||||
Sbjct 2627 AAG--G-TGTTTGTAATATTACTAGCAATAGTACTTAGGAATGTTGTAATCTTTTAGTAT 2683
Query 2562 TAGTATCATCTTATTATTGTTGGTTCCATTTTACTTGAGAAGCAAAAGAATGTT 2615
||||||||| |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 2684 TAGTATCATATTATTATTGTTGGTTCCATTATACTTCAGAAGCAAAAGAATGTT 2737
> AT5G01290.1 | Symbols: | mRNA capping enzyme family protein
| chr5:117307-121569 FORWARD LENGTH=2364
Length=2364
Score = 1378 bits (746), Expect = 0.0
Identities = 1664/2087 (80%), Gaps = 144/2087 (7%)
Strand=Plus/Plus
Query 166 CTGTT-CATTTGCCCTTGAA-TGGTCGCTACGATGGACTTAAATGCTTCACCCCAACCCG 223
||||| | |||||| ||||| | | ||| |||||||| ||||||||||||| |||||||
Sbjct 183 CTGTTGC-TTTGCCATTGAATTATTTGCTGCGATGGACCTAAATGCTTCACCACAACCCG 241
Query 224 AAGAAGATGACGAACCCTATGTGAGACATTTAGAAGATTATAATTCTCGGGATGACCGGA 283
||||||| || ||||||| | | | || ||| | | | || || || |
Sbjct 242 AAGAAGACGATGAACCCT-T-T-----A---AG-AGA-CGTCA---T---GAAGATCGAA 283
Query 284 TAGAGTCTGCTGTTGAAATCGCAAGATGGGTA-CGAGAAGAGA-GAAAGAAACGAATGAG 341
| || ||||||||||| ||||| ||| ||| | || ||||| | ||||||||||||||||
Sbjct 284 TGGAATCTGCTGTTGAGATCGCTAGACGGG-AGCGTGAAGA-ACGAAAGAAACGAATGAG 341
Query 342 ATATGACAAGCCAACACATA-ACTCGCAGCCAG-TTTTCCGTGATCAATATTATCAGAAT 399
|| ||| | |||||||| | ||| ||||| | |||| ||||||| | ||| || |
Sbjct 342 ATTTGATAGGCCAACAC-GAGTCTCTCAGCCGGCTTTT-CGTGATC---AGTAT-AG-A- 393
Query 400 CGAAATACTAAAGCTTATGATAGATA-CAAGATCCCTCAAGGTTGGCTAGACTGCCCTCC 458
| |||||| || ||||||| | | |||| | ||||| ||||||||||| || |||
Sbjct 394 -G--ATACTAGAGTTTATGAT-CAAAGCAAGCTTCCTCAGGGTTGGCTAGATTGTCCTGG 449
Query 459 TTCTGGGCAT-GAGATAGGAT-TCCTTGTTCCTTCCAAAGTTCCCCTGAATGAATCTTAC 516
|| ||| | | |||||||||| | || ||||||| || ||||| || | ||||||||||
Sbjct 450 TTTTGGTC-TGGAGATAGGATGT-ATTATTCCTTCTAAGGTTCCACTTAGTGAATCTTAC 507
Query 517 AA-TAATCATGTACCTCCTGG-AAGTAGATACTCTTTTAAACAGGTGATCCATAACCAGA 574
|| || ||||| |||||||| || ||||||||||| ||||||||| | | ||||||||
Sbjct 508 AACGAA-CATGTTCCTCCTGGTAA-AAGATACTCTTTCAAACAGGTGGTTCGTAACCAGA 565
Query 575 GGA-TAGCTGGGAGAAAGCTTGGTCTGGTGATCGAT-TTGACAAACACAACTCGTTACTA 632
| | || ||| ||||| |||||||| || || ||| || || || ||||||||||||||
Sbjct 566 GAATTA-ATGGAAGAAAACTTGGTCTAGTCATTGATCTT-ACTAATACAACTCGTTACTA 623
Query 633 TTCTACGA-CAGACTTGAAGAAAGAAGGCATTAAGCATGTGAAGATTGCATGCAAGGGTC 691
|||| | |||||| ||||| || ||||| |||||||| ||||||||||||| |||||
Sbjct 624 CCCTAC-ATTAGACTTAAAGAAGGATGGCATCAAGCATGTTAAGATTGCATGCAGGGGTC 682
Query 692 GTGATTCAGTGCCAGATAATGTGTCTGTCAATGCGTTTGTCAATGAGGTTAAT-CAGTTC 750
||||| | ||||| |||||||| ||||| || | |||||||| |||||| | ||||||
Sbjct 683 GTGATGCTGTGCCTGATAATGTCTCTGTAAACACCTTTGTCAACGAGGTT-CTGCAGTTC 741
Query 751 GTCCTAAATCTAAAACACTCGAAA-AAGTATATTCTCGTCCACTGTACACATGGGCATAA 809
||||| |||| ||||||| | ||| |||||| | ||||||||||||||||||||||||||
Sbjct 742 GTCCTTAATCAAAAACACGC-AAAGAAGTATGTCCTCGTCCACTGTACACATGGGCATAA 800
Query 810 TCGGACAGGGTTTATGATAGTTCATTATCTTATGCGATCTTTGCCAA---TGAATGTTAC 866
|||||||||||| ||||||||||||||||| ||||| ||| |||||| |||| |||||
Sbjct 801 TCGGACAGGGTTCATGATAGTTCATTATCTCATGCGCTCTATGCCAACGATGAACGTTAC 860
Query 867 ACAGGCATTGAAAATCTTTTCTGATGCCCGACCACCTGGGATCTATAAACCTGATTATAT 926
|||||||||||| | |||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 861 ACAGGCATTGAAGTTGTTTTCTGATGCCCGCCCACCTGGGATTTATAAACCAGATTATAT 920
Query 927 TGATGCTTTATACTCGTTTTATCACGAAATAAAACCTGAAAGCGTCATTTGCCCATCAAC 986
||||||||||||| | ||||||||||||||||| |||||||| || | ||||||| ||||
Sbjct 921 TGATGCTTTATACACTTTTTATCACGAAATAAAGCCTGAAAGTGTTACTTGCCCACCAAC 980
Query 987 TCCTGAATGGAAGAGGTC-GACTGAACTTGAT-TTAAATGGTGAAGCT-TTGCCAgatga 1043
|||||||||||||||||| | | || |||||| |||| |||||||||| || | ||||||
Sbjct 981 TCCTGAATGGAAGAGGTCTGCC-GAGCTTGATCTTAA-TGGTGAAGCTGTT-CAAGATGA 1037
Query 1044 tgatgatgatgatgGCGGTCCAGC-TGGCCCTGTGCAATGTTTTCAGGAGGAAAGTCA-T 1101
||||||||||||| | ||| || || |||||| | || || ||| ||| |
Sbjct 1038 TGATGATGATGATT-C--TCC-GCCTGACCCTGT----T-----CA--AG-AAA-TCAAT 1080
Query 1102 CCAGTG-GA-TGTCAAGATGTCAAATGATGACG-TTCTAGGTGATGAAATTCCCCCTGAC 1158
| || | || ||| |||||||||||||||||| || | ||||||||||| |||| | |
Sbjct 1081 C-AG-GAGAATGTGAAGATGTCAAATGATGACACTT-TGGGTGATGAAATACCCCATTAT 1137
Query 1159 CAGGAGGAAGGTTATCGGCAGTTCTTTTATAAGATGCT-ATCACTGAATATTGGGGGAAG 1217
|||||||||| ||| ||||| |||| |||||| ||||| || | ||||| ||||||||||
Sbjct 1138 CAGGAGGAAGCTTACCGGCAATTCTGTTATAAAATGCTTATGA-TGAATGTTGGGGGAAG 1196
Query 1218 AGGATGT-TCACAATTTCCC-GGTTCACACCCTGTCTCCTTAAACAGGGAAAATTTGCAA 1275
||||| | | ||||| ||| ||||| |||||||| || ||| ||||||| | |||||||
Sbjct 1197 AGGATTTATG-CAATT-CCCAGGTTCGCACCCTGTATCATTAGACAGGGAGAGTTTGCAA 1254
Query 1276 CTCTTGAGGCAGCGGTACTATTATGCAACATGGAAAGCTGATGGAACGCGATATATGATG 1335
|| ||||||||||| ||||||||||| |||||||| || |||||||| || |||||||||
Sbjct 1255 CTTTTGAGGCAGCGATACTATTATGCGACATGGAAGGCAGATGGAACACGTTATATGATG 1314
Query 1336 CTGCT-AACCATAGATGGATGCTATCT-AGTAGATAGGAGCTTTA-GATTCCGGAGGGTA 1392
|| || ||| |||||||| |||||| | | ||||||||||||||| | ||| ||||||||
Sbjct 1315 CT-CTTAACTATAGATGGGTGCTATTTGA-TAGATAGGAGCTTTAAGTTTC-GGAGGGTA 1371
Query 1393 CAGATGCGGTTCCCCT-TCAGGCACCCAAC-TGAAGGCATATCTGATAAAGTGCACCATT 1450
|||||||| || |||| | || ||| || | ||| || || |||||||||||||| || |
Sbjct 1372 CAGATGCGTTTTCCCTGTAAG-CACTCA-CGTGAGGGAATTTCTGATAAAGTGCATCACT 1429
Query 1451 ACACATTGCTTGATGGAGAAATGATAATCGATACCTTGCCAGATAAACAAAAGCAGG-A- 1508
|||| |||||||||||||| ||| | || |||||| | ||| | | ||| | ||| |
Sbjct 1430 ACACTTTGCTTGATGGAGAGATGGTCATAGATACCCCGACAGGTGAGCAAGGGGAGGCAA 1489
Query 1509 G-AGGAGATACCTAATCTATGACATGGTAGCAATCAACGGCCAATCAGTTGTAGAGAGGC 1567
| ||||| || || | ||||| |||||||||||||| || |||||||||||||| ||
Sbjct 1490 GGAGGAGGTATCTCGTATATGATATGGTAGCAATCAATGGTGAATCAGTTGTAGAGCGGA 1549
Query 1568 CTTTCTATGAAAGATGGAAGATGCTCGAGAAG-GAGGTGATAG-ACCCCC-GTAATCATG 1624
|||||| |||||||||||| ||| ||| | | |||||||| | ||| | | | | ||
Sbjct 1550 CTTTCTGTGAAAGATGGAACATGTTCGTGC-GTGAGGTGATCGGACCTCGAGCAG-C-TG 1606
Query 1625 AGAAGGC-CAGAAGTCATAT-CTACAGATATGATCTTGAGCCTTTTAG-GGTGCGGA-GA 1680
||||| | |||||||||| | |||||||||||| |||||||||||| | ||| |||| ||
Sbjct 1607 AGAAG-CTCAGAAGTCAT-TGCTACAGATATGACCTTGAGCCTTTT-GCGGTACGGATGA 1663
Query 1681 AAGGATTTTTGGTTGCTTTCTGCGGTTGAGAAGGTTTTGAAGGGTTTCATACCGTCACTT 1740
| || ||| ||||| |||||| | ||||||||| | |||||| | ||| || || |||
Sbjct 1664 AGGG-TTTCTGGTTACTTTCTACTGTTGAGAAGCTGTTGAAGAATACCATTCCATCGCTT 1722
Query 1741 TCACATGAAGCCGACGGCCTAATCTTTCAGGGCTGGGATGATCCTTATGTTCCCCGCACC 1800
|| |||||||| || ||| |||| |||||||| ||||||||||| |||||||| || |||
Sbjct 1723 TCGCATGAAGCAGATGGCTTAATATTTCAGGGTTGGGATGATCCGTATGTTCCACGAACC 1782
Query 1801 CATGAAGGTCTGTTGAAGTGGAAGTATCCAGAGATGAACTCGGTTGACTTTCTATACGAG 1860
||| ||||||| |||||||||||||| |||| |||||||| || |||||||| || |||
Sbjct 1783 CATAAAGGTCTACTGAAGTGGAAGTATGCAGAAATGAACTCAGTAGACTTTCTGTATGAG 1842
Query 1861 CA-GGATGAG-A-GTGGC-CGTGGAATGCTCTCCTTGTTTGAAAGAGGGAAGAAAAAGCA 1916
| || |||| | | || ||||| | |||| |||| ||||||||||||||||||||
Sbjct 1843 -ATGGGTGAGGAAGAGGGGCGTGGTTTCCTCTTCTTGCATGAAAGAGGGAAGAAAAAGCT 1901
Query 1917 TATGGATGGGA-ATTCTGTTGTTTTTAGAGATGATTCAGACCCTTCCGAGT-ACTCTGGG 1974
|||||| || | |||| |||| |||||||||||||| ||||| || ||| || ||||
Sbjct 1902 TATGGAAGG-ATATTCAGTTGAGTTTAGAGATGATTCGGACCCGTCA-AGTTACAATGGG 1959
Query 1975 AAGATTGTAGAATGTTCTTGGGATCAGGATGAGAAAGTCTGGGTAAGCATGCGGGTCAGG 2034
||||||||||||||| |||||||| ||||| ||||||| ||| | |||||| || ||||
Sbjct 1960 AAGATTGTAGAATGTGCTTGGGATAAGGATAAGAAAGTTTGGTTTAGCATGAGGATCAGA 2019
Query 2035 GTCGATAAATCAACGCCTAATGATATCAACACT--TACAGAAAGGTGATGA-GAAGCATC 2091
|| || ||| | || || ||||||||||||||| | | | |||||||| | || ||||
Sbjct 2020 GTTGACAAAACTACACCAAATGATATCAACACTGCT-C-GTAAGGTGATAAAGA-GCATA 2076
Query 2092 AAGGACAACATCACAGAGGAAGTGTTGCTGCAGGAGATAAGGGAGATAATCCGTTTGCCT 2151
|| || |||||||| ||||| || ||||| ||||| ||||| ||||| || ||| | ||
Sbjct 2077 AATGATAACATCACTGAGGAGGTTTTGCTTCAGGAAATAAGAGAGATCATTCGTCTCCCA 2136
Query 2152 ATGTATGCGGACCGTATCC-AAATGGATAG-CAAAGCTGCGCGTCGC 2196
||||| || ||||| || | ||||| |||| ||| ||||| || |||
Sbjct 2137 ATGTACGCTGACCGCATTCGAAATG-ATAGTCAA-GCTGCCCGCCGC 2181
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 129832048484
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5