BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478225 Length=1124 Score E Sequences producing significant alignments: (Bits) Value AT3G09120.1 | Symbols: | Protein of unknown function (DUF674) ... 1476 0.0 > AT3G09120.1 | Symbols: | Protein of unknown function (DUF674) | chr3:2796958-2798764 REVERSE LENGTH=1625 Length=1625 Score = 1476 bits (799), Expect = 0.0 Identities = 1024/1132 (90%), Gaps = 18/1132 (2%) Strand=Plus/Plus Query 1 CTTGTGGTTTCATTATTCTCATTTACTGTCTGATAAA-AACCCTCTTGAGATTCGTAACT 59 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 1 CTTGTGGTTTCATTATTCTCATTTACTGTCTGATAAAGAAAACTCTTGAGATTCGTAACC 60 Query 60 GCTGGTTCTTCAATATATAGAGGCGCATCTTCTTGTTCACGTCTTCATAGCCTA-ATATC 118 |||||||||||||||||||||||||||||||||| ||||| |||||||| || | ||| | Sbjct 61 GCTGGTTCTTCAATATATAGAGGCGCATCTTCTTATTCACATCTTCATA-CCGAGATACC 119 Query 119 TAAATTCTCAGTTACTGCTCTTCCTTG-TTTTGCTCTTACTCGTTTCCTTAACCTACAAT 177 |||| ||||||||||||||||||||| |||| |||||||||||||||||||| || ||| Sbjct 120 TAAAACCTCAGTTACTGCTCTTCCTTGCTTTT-CTCTTACTCGTTTCCTTAACTTAAAAT 178 Query 178 GGC-AAGAAGTGCGAAGTTTAGCTTGAAACTTCTCGTTGATGAGAAGAAAAACAAAGTTG 236 ||| ||| |||| |||| |||||||||||||||||||||||||||| |||||||| |||| Sbjct 179 GGCTAAG-AGTGAGAAGATTAGCTTGAAACTTCTCGTTGATGAGAAAAAAAACAAGGTTG 237 Query 237 TGTTAGCTGAGGCTGGTCATGATTTTGTTGATGTGCTCTTTGGTCTCTTGACACTCCCAA 296 | || |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct 238 TTTTGGCTGAGGCTGGTCAAGATTTTGTTGATGTGCTCTTTGGTCTCTTGACATTCCCAA 297 Query 297 TGGGGACTATTGCAAGATTGCTGGAGAATCATCAGAAGTTACCACAAGTCTTAGGTTGTT 356 |||||||||||||||||||||||||||| |||||||||||||||||| || |||| |||| Sbjct 298 TGGGGACTATTGCAAGATTGCTGGAGAAGCATCAGAAGTTACCACAAATCCTAGGATGTT 357 Query 357 ACAAGAATCTTAAACAAAGTGTTTCAGATATGGTCATTGATGATTTCGAGACCGAGGCTT 416 |||||||||||| | ||||||||||||||||| | ||||||||||| |||||||||||| Sbjct 358 ACAAGAATCTTAGTCGAAGTGTTTCAGATATGGCCGTTGATGATTTCAAGACCGAGGCTT 417 Query 417 GCAAGAGTATGTTGCTTTCTCCAAAGAGTTCGAAGGAGATCCATTGCAGAAGACTCAAGT 476 | |||||||||||||||||||||||||| || | |||||||||||||||||||||||| Sbjct 418 GTAAGAGTATGTTGCTTTCTCCAAAGAGCTCCATGGAGATCCATTGCAGAAGACTCAAAC 477 Query 477 TGAACATTGATGATACTGC-GGCCACAACGTTCTATGTATGCTCTAAATTGTATGAGAGC 535 || |||||||||||||| | ||| |||| ||||||||||||||| ||| | |||||||| Sbjct 478 TGCACATTGATGATACT-CAGGCTACAATGTTCTATGTATGCTCAAAAAAGCATGAGAGC 536 Query 536 GACTCATGTAAGGTATACAGCAATTTTTACAACTCAAGATGTAGCTGTGGATCTTTGATG 595 |||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 537 GACTCAAGTAA-GTAT--AGCAATTTTTACAAATCAAGATGTAGCTGTGGATCTTTGATG 593 Query 596 AGCTATTC-GGTTCAGGTTCCAGAAGACGCGCAAGTTCTAGAGTTGTTAGGGAATGCTGT 654 | ||| || | |||| ||||||||||| | ||||||| |||| | |||||| ||||||| Sbjct 594 ATCTA-TCAGATTCATGTTCCAGAAGATGAGCAAGTTGTAGACTCGTTAGGAAATGCTGA 652 Query 655 AGATGGTGTGTTTGTTAGCTGTAGATCCTCTTTCATTGTCACAAATGATTTGAAAGTGAT 714 ||||| ||||||||||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct 653 AGATGTTGTGTTTGTTAGCTGTAGATCATCTTTCATTCTGACAGATGATTTGAAAGTGAT 712 Query 715 GTTGAACTCTATTGATGAAATAGTGAAGGTGGTCAATGGCCTAGGATATCCAAATTTAAA 774 |||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| |||| Sbjct 713 GTTGAATTCTATCGATGAAATAGTCAAGGTTCTCAATGGCCTAGGATATCCAAATATAAA 772 Query 775 TGAGCTGCAGGAAATGCTCATTGATGTTGGCTCTGAAGAGGTGCTGTCTCTACTGGGGAA 834 || || |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 773 CGATCTTAAGGAAATGCTCATTGATGTTGGCTCTGAAGAGGTTTTGTCTCTACTGGGGAA 832 Query 835 TTTATTCACTTCCGAGTCTGCCTTGACAAGCACATTCCTCATGAAACAGAGCATGACAAC 894 |||||||||||| |||||||||||||||||||||||||||||||||||| | ||||| || Sbjct 833 TTTATTCACTTCAGAGTCTGCCTTGACAAGCACATTCCTCATGAAACAGTGTATGACGAC 892 Query 895 GATGCTTCCATTGCCGCCTCCACCAATGTTCAAAACTGGAAC-AGTAGAACAGGGCAGTG 953 ||||||| || || | ||||||||||||||||||||||| || |||||||||||||||| Sbjct 893 GATGCTTACACTGTCACCTCCACCAATGTTCAAAACTGG-ACGGGTAGAACAGGGCAGTG 951 Query 954 GATGCCATATGAAAGTGTTCGTTGGAAAGTTAGACAGGAAGATTCTTTATGCTGAGTGCA 1013 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 952 GATGCCATATTAAAGTGTTCGTTGGAAAGTTAGACAGAAAGATTCTTTATGCTGAGTGCA 1011 Query 1014 GTGAAGACTTCATTGATTCTCTTCTCACTTTTCTTGTTCTCCCTCTTGAGTCGGCGTCTT 1073 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 1012 GTGAAGACTTCATTGATTCTCTTCTCACTTTTCTTGTTCTGCCTCTCGAGTCGGCGTCTT 1071 Query 1074 CGCTCTCC-AATGACAATACCATTTTTGGATGTGTCAAGAATTTGTGCAGAT 1124 || ||| | || |||||||||||| | |||||||| |||||||||||| ||| Sbjct 1072 CGTTCTTCGAA-GACAATACCATTATCGGATGTGTAAAGAATTTGTGCTGAT 1122 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55120198410 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5