BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478260 Length=1122 Score E Sequences producing significant alignments: (Bits) Value AT3G09405.1 | Symbols: | Pectinacetylesterase family protein |... 1079 0.0 AT3G09410.1 | Symbols: | Pectinacetylesterase family protein |... 732 0.0 > AT3G09405.1 | Symbols: | Pectinacetylesterase family protein | chr3:2894812-2897674 REVERSE LENGTH=1735 Length=1735 Score = 1079 bits (584), Expect = 0.0 Identities = 673/717 (94%), Gaps = 2/717 (0%) Strand=Plus/Plus Query 407 AGCTCATTTGGGAGACAATTATGGATGAATTGTTGTCGATGGGCATGTCACATGCGAAAC 466 |||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| Sbjct 823 AGCTCATTTGGGAGGCTATCATGGATGAATTGTTGTCGATGGGCATGTCACATGCGAAAC 882 Query 467 ATGCAATTCTCACAGGATGTTCTGCAGGTGGCTTGGCTACTCTTATACATTGTGACTACT 526 ||| || ||||||||||||||||| ||||||||| ||||||| |||||||||||||||| Sbjct 883 GTGCCATGCTCACAGGATGTTCTGCTGGTGGCTTGTCTACTCTAATACATTGTGACTACT 942 Query 527 TTCGAGACCATCTGCCTAACGATGCAACTGTTAAATGTGTTTCCGATGGAGGCTATATTC 586 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 943 TTCGAGACCATCTGCCTAAAGATGCAACTGTTAAATGTGTTTCCGATGGAGGCTATATTC 1002 Query 587 TCAACT-TGCCTGATGTGCTTGGAAACCCAACAATGGGATCTTTCTTTCATGATGTTGTT 645 | || | ||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1003 TTAA-TGTGCTTGATGTCCTTGGAAACCCAACAATGGGATCTTTCTTTCATGATGTTGTT 1061 Query 646 ACCCTGCAGCGCGTAGATAGGAGCTTGGATCAGAATTGTGTAGCCAAAATGGAACCATCT 705 ||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 1062 ACCCTGCAGAGCGTAGATAAGAGCTTGGATCAGAATTGTGTTGCCAAAATGGAACCATCT 1121 Query 706 AAGTGTCTGTTTCCTCAAGAATCGCTTAAAAACATAAGAACTCCGGTATTTCTTGTCAAC 765 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1122 AAGTGTATGTTTCCTCAAGAATCTCTTAAAAACATAAGAACTCCGGTATTTCTTGTCAAC 1181 Query 766 ACAGCCTACGATTATTGGCAAATTCAAAATGGACTGGTACCAGAGTCTCCGAATTTAGAT 825 |||||||||||||||||||| |||||||| || ||||||||||| |||||| || ||||| Sbjct 1182 ACAGCCTACGATTATTGGCAGATTCAAAACGGCCTGGTACCAGATTCTCCGGATCTAGAT 1241 Query 826 GAAAGATGGGCGATTTGTAGACTCAATATTCAGGAATGTGATGCCGCACAAATGAAAGTT 885 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1242 GAAAGATGGAAAATTTGTAGACTCAATATTCAGGAATGTGATGCCGCACAAATGAAAGTT 1301 Query 886 CTACATGGTTTTCGGAATTCCCTGATCGATGCGATCGGAGAATTTCATGAGGACAAAGAG 945 || |||||||| || | |||||||||||||||||| ||||||||||||| | |||||||| Sbjct 1302 CTGCATGGTTTCCGCAGTTCCCTGATCGATGCGATAGGAGAATTTCATGTGAACAAAGAG 1361 Query 946 GGTGGGATGTTTATAAATTCGTGCAATTCTCATTGCCAGATAAGAGAGTCATGGCACTCC 1005 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1362 GGTGGGATGTTTATAAATTCGTGCAATTCTCATTGCCAGATAAGAGAGTCATGGCATTCC 1421 Query 1006 CCAACCTCAACAAGAATCGAAAATAAGACGATCGCAGAGTCTGTAGGTGATTGGTACTAC 1065 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 1422 GCAACCTCAACAAGAATCGAAAATAAGACGATTGCAGAGTCTGTAGGTGATTGGTACTTC 1481 Query 1066 AACCGAAAACCAGTGAAGCTAATCGATTGTCCATACCCGTGCAATACCTCTTGTTGA 1122 ||||||||||| |||||||||||||||||||| || ||||||||| ||||||||||| Sbjct 1482 AACCGAAAACCGGTGAAGCTAATCGATTGTCCTTATCCGTGCAATGCCTCTTGTTGA 1538 Score = 346 bits (187), Expect = 3e-94 Identities = 203/211 (96%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 198 GGGTGGAGGCGGGTGCCGTACAATTGAGTCATGTTCTTCTAGAGCAATGACTAGGTTAGG 257 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 584 GGGTGGAGGCGGGTGCCGTACAATTGAGTCATGTTCTGCTAGAGCAATGACTAGGTTAGG 643 Query 258 TTCTTCCAACTTCTTTGAACATGAAGTTCCCTTTCAAGGCGTTTTAAGCAGTGACCCATC 317 ||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| Sbjct 644 TTCTTCCAACTTCTTTGAACATGAAGTGCCTTTTTTTGGCGTTTTAAGCAGTGACCCATC 703 Query 318 TCAAAATCCTGACTTCTTTAACTGGAACAGAGTTATGATTCGGTACTGTGATGGTGCTTG 377 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 704 TCAAAACCCTGACTTCTTTAACTGGAACAGAGTTATGATACGGTACTGTGATGGTGCTTG 763 Query 378 TTTTTCTGGACACCCTGAAGCTGAATTCAAG 408 ||||||||||||||||||||||||||||||| Sbjct 764 TTTTTCTGGACACCCTGAAGCTGAATTCAAG 794 Score = 191 bits (103), Expect = 1e-47 Identities = 127/138 (92%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 1 ATGGCGATTCACTCTCTGCTACAATGCAGAACATGGTCTAAGAGTGACTGGCTTATCGCT 60 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 309 ATGGTGATTCGCTCTCTGCTACAATGCAGAACATGGTCTAAGAGTGACTGGCTTCTCGCT 368 Query 61 TCAATCGGAATAGTCTTGAT-GTGTT-TTCCTTTTCTTTCTCTTTCGATTCGACTTCAGA 118 |||||||||||||||||||| || || |||||||||||| || ||| |||| |||||||| Sbjct 369 TCAATCGGAATAGTCTTGATCGT-TTATTCCTTTTCTTTGTCCTTCAATTCAACTTCAGA 427 Query 119 CTCTATCCCCTCCATTGA 136 ||||||||||||| |||| Sbjct 428 CTCTATCCCCTCCGTTGA 445 > AT3G09410.1 | Symbols: | Pectinacetylesterase family protein | chr3:2897638-2901019 REVERSE LENGTH=1740 Length=1740 Score = 732 bits (396), Expect = 0.0 Identities = 623/730 (85%), Gaps = 26/730 (4%) Strand=Plus/Plus Query 407 AGCTCATTTGGGAGACAATTATGGATGAA-TTGTTGTCGATGGGCATGTCACATGCGAAA 465 |||| ||||||||| | ||||| |||||| || ||||| |||||||||||| |||| ||| Sbjct 580 AGCTTATTTGGGAGGCTATTATTGATGAACTT-TTGTCAATGGGCATGTCAGATGCCAAA 638 Query 466 CATGCAATTCTCACAGGATGTTCTGCAGGTGGCTTGGCTACTCTTATACATTGTGACTAC 525 || || || || |||||||||||||| ||||||||||| | ||||||||||||||||||| Sbjct 639 CAGGCCATACTTACAGGATGTTCTGCCGGTGGCTTGGCAAGTCTTATACATTGTGACTAC 698 Query 526 TTTCGAGACCATCTGCCTAACGATGCAACTGTTAAATGTGTTTCCGATGGAGGCTA-TAT 584 |||||||| ||||| || || |||||| |||| ||||||||||| ||||||||||| | | Sbjct 699 TTTCGAGATCATCTTCCAAAAGATGCAGCTGTCAAATGTGTTTCTGATGGAGGCTACT-T 757 Query 585 TCTCAACTTGCCTGATGTGCTTGGAAACCCAACAATG-GGATCTTTCTTTCATGATGTTG 643 ||||||| |||||||||| |||||||||||||||||| || ||||||| ||||||||||| Sbjct 758 TCTCAACGTGCCTGATGTCCTTGGAAACCCAACAATGAGG-TCTTTCTATCATGATGTTG 816 Query 644 TTACCCTGCAGCGCGTAGATAGGAGCTTGGATCAGAATTGTGTAGCCAAAATGGAACCAT 703 ||| ||||| ||||||| | ||||||||||||||| ||||||||||||| ||| |||| Sbjct 817 TTAATTTGCAGGGCGTAGAGAAGAGCTTGGATCAGAAATGTGTAGCCAAAACGGAGCCAT 876 Query 704 CTAAGTGTCTGTTTCCTCAAGAA-TCGCTTAAAAACATAAGAACTCCGGTATTTCTTGTC 762 |||||||| |||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct 877 CTAAGTGTATGTTTCCTCAAGAATTC-CTGAAAAACATAAGAACTCCGGTATTTCTTGTC 935 Query 763 AA-CACAGCCTACGATTATTGGCAAATTCAAAATGGACT-GGTACCAGAGT-CTCCGAAT 819 || | |||||||||||| |||||| |||||| ||| || ||||||| | | || || || Sbjct 936 AATC-CAGCCTACGATTTTTGGCAGATTCAACATGT-CTTGGTACCA-ACTTCTGCGGAT 992 Query 820 TTAGATGAAAGATGGGCGATTTGTAGACTCAATATTCAGGAATGTGATGCCGCACAAATG 879 |||| |||| ||||| | || |||||||||||| ||||||||||||||| ||| || Sbjct 993 CCAGATAAAAGTTGGGCAAAGTGCAGACTCAATATTAAGGAATGTGATGCCGAACAGATT 1052 Query 880 AAAGTTCTACATGGTTTTCGGAATTCCCTGATCGA-TGCGATCGGAGAATTTCATGAGGA 938 ||||||||||| |||||||| | ||| |||| || ||| || || ||||||||| || | Sbjct 1053 AAAGTTCTACACGGTTTTCGCAGTTCTATGAT-GACTGCAATTGGGGAATTTCATCAGAA 1111 Query 939 CAAAGAGGGTGGGATGTTTATAAATTCGTGCAATTCTCATTGCCAGATAAG--A-GA--G 993 |||||| ||||||||||| ||| |||| ||| || |||||||||||| | | | | | Sbjct 1112 CAAAGATGGTGGGATGTTCATAGATTCCTGCTATGCTCATTGCCAGACA-GTCATGTCCG 1170 Query 994 T--CATGGCACTCCCCAACCTCAACAAGAATCGAAAATAAGACGATCGCAGAGTCTGTAG 1051 | |||||||||||| |||||| ||||||||||||||||||| || ||||||||||||| Sbjct 1171 TGACATGGCACTCCCTGACCTCACCAAGAATCGAAAATAAGACAATTGCAGAGTCTGTAG 1230 Query 1052 GTGATTGGTACTACAACCGAAAACCAGTGAAGCTAATCGATTGTCCATACCCGTGCAATA 1111 |||| ||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct 1231 GTGACTGGTACTTCAACAGAAAACCGGTGAAGCTAATCGATTGTCCATACCCGTGCAAT- 1289 Query 1112 CCT-CTTGTT 1120 ||| |||||| Sbjct 1290 CCTTCTTGTT 1299 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55019797320 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5