BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478302
Length=2130
Score E
Sequences producing significant alignments: (Bits) Value
AT3G09790.1 | Symbols: UBQ8 | ubiquitin 8 | chr3:3003862-300619... 2667 0.0
AT5G20620.1 | Symbols: UBQ4 | ubiquitin 4 | chr5:6973071-697494... 457 2e-127
AT5G37640.1 | Symbols: UBQ9 | ubiquitin 9 | chr5:14952782-14953... 375 7e-103
AT4G05050.1 | Symbols: UBQ11 | ubiquitin 11 | chr4:2588004-2589... 351 1e-95
AT4G05320.2 | Symbols: UBQ10 | polyubiquitin 10 | chr4:2718170-... 272 9e-72
AT1G55060.1 | Symbols: UBQ12 | ubiquitin 12 | chr1:20549533-205... 176 8e-43
> AT3G09790.1 | Symbols: UBQ8 | ubiquitin 8 | chr3:3003862-3006192
REVERSE LENGTH=2331
Length=2331
Score = 2667 bits (1444), Expect = 0.0
Identities = 1804/1971 (92%), Gaps = 52/1971 (3%)
Strand=Plus/Plus
Query 199 CTCGAGGATGGCCTTACCTTGGCTGATTACAACATCCAGAAGGAGTCCACTCTCCACTTG 258
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 340 CTCGAGGATGGCCTTACCTTGGCTGATTACAACATCCAGAAAGAGTCAACTCTCCACTTG 399
Query 259 GTTCTAAGGCTCAGTGGTGGTATGCAAATCTTTGTGAAGACTCTTACGGGAAAGACCATA 318
||||| ||| | || ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 400 GTTCTGAGGTTGAGAGGTGGTATGCAAATCTTTGTGCAGACTCTTACGGGAAAGACCATA 459
Query 319 ACTCTTGAGGTGGAGAGCTCTGACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAA 378
|| |||||||| | ||||| ||||| || || |||||||||||||||||||||||||||
Sbjct 460 ACCCTTGAGGTCAAAAGCTCAGACACTATCGATAACGTCAAGGCCAAGATCCAAGATAAA 519
Query 379 GAAGGAATCCCTCC-GGACCAGCAGAGGCTGATCTTTGCAGGTAAGCAACTCGAGGATGG 437
|||||||||| ||| | ||||||||| || |||||||||||||||||||||||||||||
Sbjct 520 GAAGGAATCCTTCCTCG-CCAGCAGAGACTTATCTTTGCAGGTAAGCAACTCGAGGATGG 578
Query 438 CCATACTCTTGCGGATTACAGCATCCAGAAAGAGTCAACACTTCACCTTGTCCTTCGTCT 497
| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||
Sbjct 579 TCGTACTCTTGCCGATTACAACATCCAGAAAGAGTCAACACTGCATCTTGTCCTTCGTCT 638
Query 498 TCGCGGTGGTATGCAGATATTTGTGA-TAACCTTTCCCGGTAAAAACTTTACCGGTGAAA 556
| |||||||||||||||||||||||| | |||||| ||||||||||||||||| |||| |
Sbjct 639 TTGCGGTGGTATGCAGATATTTGTGAGT-ACCTTTTCCGGTAAAAACTTTACCAGTGACA 697
Query 557 CCCTCACCCTAGAAGTTGAGAGCTCAGACACCATTGACAGTGTCAAGGCGAAGATTCAAG 616
||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 698 CCCTCACCCTAAAAGTTGAGAGCTCAGACACCATTGAAAATGTCAAGGCGAAGATTCAAG 757
Query 617 ATAGGGAAGGTTTACGCCCGGACCACCAGAGGCTCAGCTTTCACGGTGAAGAGCTCTTCA 676
| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 758 ACAGGGAAGGTTTACGCCCGGACCACCAGAGGCTTATCTTTCACGGTGAAGAGCTCTTCA 817
Query 677 CCAAGGATGGCCGTACTCTTGCCGATTACGGCATCCAGAATAAGTCAGCCCTTCACCTTG 736
|| ||||| ||||||||||| ||||||||||||| ||||| |||| ||||| ||||
Sbjct 818 CCGAGGATAATCGTACTCTTGCGGATTACGGCATCCGGAATAGGTCAACCCTTTGCCTT- 876
Query 737 GCAC-TCGTCTTCGCGGTAATATGTATATATTTGTGAAAAACCTTCCCTATAATACCTTT 795
|| | ||||||||||||| |||||||||||||||||||||||||||| |||||| |||||
Sbjct 877 GCCCTTCGTCTTCGCGGTGATATGTATATATTTGTGAAAAACCTTCCTTATAATTCCTTT 936
Query 796 ACCGGTGAAAACTTCATCCTAGAAGTTGAGAGCTCAGACACCATTGACAATGTTAAAGCT 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 937 ACCGGTGAAAACTTCATCCTAGAAGTTGAGAGCTCAGACACCATTGACAATGTTAAAGCT 996
Query 856 AAGATCCAAGAAAAGGAAGGAATTCCTATGGACCTACATAGACTTATCTTTGCTGGTAAA 915
||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 997 AAGCTCCAAGACAAGGAAAGAATTCCTATGGACCTACATAGACTTATCTTTGCTGGTAAA 1056
Query 916 CCGCTTGAGGGTGGTCGAACGCTAGCACATTACAACATCCAGAAAGGATCAACTCTGTAT 975
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1057 CCGCTTGAGGGTGGTCGAACCCTAGCACATTACAACATCCAGAAAGGATCAACTCTGTAT 1116
Query 976 CTGGTGACTAGATTCCGTTGTGGGATGCAGATTTTTGTCAAGACCCTTACCGGAAAGAGA 1035
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 1117 CTGGTGACTAGATTCCGTTGTGGGATGCAGATTTTCGTCAAGACCCTTACCAGAAAGAGA 1176
Query 1036 ATAGATTTGGAAGTTGAGAGCTGGGACACAATAGAAAATGTTAAGGCCATGATTCAGGAT 1095
||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||
Sbjct 1177 ATAAATTTGGAAGTTGAGAGCTGGGACACAATCGAAAATGTAAAGGCCATGGTTCAGGAT 1236
Query 1096 AAAGAAGGGATCCAACCAGA-CC-----TGCAGAGGCTGATCTTTCTCGGTAAAGAGCTC 1149
|||||||||||||||||| | || ||||||||||||||||||| ||||||||||||
Sbjct 1237 AAAGAAGGGATCCAACCACAACCAAACCTGCAGAGGCTGATCTTTCTTGGTAAAGAGCTC 1296
Query 1150 AAGGATCGCTGTACTCCTGCGGATTACGGCATCCAGAAAGAGTCAACACTCCACCTTGTC 1209
|||||| | ||||||| |||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1297 AAGGATGGTTGTACTCTTGCGGATTACAGCATCCAGAAAGAGTCAACACTTCACCTTGTC 1356
Query 1210 CTTGGTATGCAGATATTTGTGAAACTCTTTGGCGGTAAAATCATTACCCTAGAAGTTGTG 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1357 CTTGGTATGCAGATATTTGTGAAACTCTTTGGCGGTAAAATCATTACCCTAGAAGTTTTG 1416
Query 1270 AGCTCAGACACCATTGAAAGTGTTAAAGCTAAGATTCAAGACAAGGTAGGTTCACCCCCG 1329
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1417 AGCTCAGACACCATTAAAAGTGTTAAAGCTAAGATTCAAGACAAGGTAGGTTCACCCCCG 1476
Query 1330 GACCAGCAGAGACTGATCTTTCTCGGTCACGAGCTCGAGGATGGCCGTACTCTTGCGGAT 1389
|||||||||| |||| | |||| |||| | | ||| |||||||||||||||||| ||||
Sbjct 1477 GACCAGCAGATACTGCTTTTTCGCGGTGGCCAACTCCAGGATGGCCGTACTCTTGGGGAT 1536
Query 1390 TACGACATCCGGAATGAGTCAACCCTTCGCCTTTTCTTTCATATTCCCCATGGTATGCAG 1449
||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1537 TACAACATCCGGAATGAGTCAACCCTTCACCTTTTCTTTCATATTCGCCATGGTATGCAG 1596
Query 1450 ATATTCGTCAAGACGTATGCATTTTCCGGTGAAACCCCTACCTGTAAAACCATTACCCTA 1509
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1597 ATATTCGTCAAGACATTTTCATTTTCCGGTGAAACCCCTACCTGTAAAACCATTACTCTA 1656
Query 1510 GAAGTTGAGAGCTCAGACACCATTGATAATGTAAAAGTTAAGATCCAACACAAGGTAGGA 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 GAAGTTGAGAGCTCAGACACCATTGATAATGTAAAAGTTAAGATCCAACACAAGGTAGGA 1716
Query 1570 ATTCCTCTGGACAGACAGAGCCTTATCTTTGGTGGTAGAGTGCTTGTGGGTACTCGAACG 1629
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 1717 ATTCCTCTGGACAGACAGAGACTTATCTTTGGTGGTAGAGTGCTTGTGGGTAGTCGAACG 1776
Query 1630 CTACTAGATTACAACATCCAGAAAGAATCTACTATCCATCAGCTGTTTCTTCAGAGAGGT 1689
||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||
Sbjct 1777 CTACTAGATTACAACATCCAGAAAGGATCAACTATCCATCAGCTATTTCTTCAGAGAGGT 1836
Query 1690 GGTATGCAGATTTTTATCAAGACCCTTACCGGAAAAACCATAATGTTGGAAGTTGAAAAC 1749
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |
Sbjct 1837 GGTATGCAGATTTTTATCAAGACTCTTACCGGAAAAACCATAATTTTGGAAGTTGAAAGC 1896
Query 1750 TCAGACACAATCGCCAATGTGAAGGAAAAGATCCAAGTTAAGGAAGGGATCACACCAGTC 1809
|||||||| ||||||||||| |||||||||||||||||||||||||| |||| ||||| |
Sbjct 1897 TCAGACACGATCGCCAATGTAAAGGAAAAGATCCAAGTTAAGGAAGGAATCAAACCAGAC 1956
Query 1810 CAACAGAGGCTAATATTTTTCGGAAAACAGCTTGAAGATGGCGTCACTTTAGGGGATTAC 1869
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1957 CAACAGATGCTAATATTTTTCGGACAACAGCTTGAAGATGGCGTCACTTTAGGGGATTAC 2016
Query 1870 TG-TATTCATAAAAATTCAACTCTCTACCTTGTTCTCCGTCT-----A---T-GA----- 1914
| |||||||||||| |||||||| ||||||||||||||||| | | ||
Sbjct 2017 -GATATTCATAAAAAGTCAACTCTTTACCTTGTTCTCCGTCTCCGTCAGCGTCGATATGA 2075
Query 1915 CttttgagttttttttagtgctttagttttttttttttCTCTTGTTATGTTTTCCGTTTT 1974
|||||||||||||||||| ||||| |||| ||||||| |||| |||||||||| ||||||
Sbjct 2076 CTTTTGAGTTTTTTTTAGCGCTTTGGTTTGTTTTTTT-CTCTCGTTATGTTTTACGTTTT 2134
Query 1975 GATGGGCTCGTAAATGGGCTTTTACCATTCAA-TTTCAAAG----A-C--T--T--TT-- 2020
||||||||| ||||||| |||||||||||||| ||| |||| | | | | ||
Sbjct 2135 GATGGGCTCATAAATGGTCTTTTACCATTCAACTTT-AAAGTCTTATCAATAATAATTTT 2193
Query 2021 Ctt-tttttttGGTTCCACAGTCTAAATCTCAATTACCATCAGATTAATCCTGATAATCC 2079
||| ||||||| |||| |||| |||||||||||||||||| |||||||||||||||| |
Sbjct 2194 CTTATTTTTTTA-TTCCGCAGTGTAAATCTCAATTACCATCGGATTAATCCTGATAATGC 2252
Query 2080 ACAATACTATTACTATTATCGAAGAAGCAAGAGCTAATGTTTAATTCATTT 2130
|||||| | | | | ||||||||||||||||||||||||||||||||||
Sbjct 2253 ACAATA-T-TG--T-T-ATCGAAGAAGCAAGAGCTAATGTTTAATTCATTT 2297
Score = 422 bits (228), Expect = 9e-117
Identities = 860/1150 (75%), Gaps = 103/1150 (9%)
Strand=Plus/Plus
Query 820 GTTGAGAGCTCAGACACCATTGACAATGTTAAAGCTAAGATCCAAGAA-AAGGAAGGAAT 878
||||| | ||| ||| ||||| | ||||| || |||||||||| |||| |||||||| ||
Sbjct 241 GTTGAAACCTCCGACTCCATTCATAATGTCAAGGCTAAGATCC-AGAACAAGGAAGGCAT 299
Query 879 TCCTATGGACCTA-CATA-GACTTATCTTTGCTGGTAAACCGCTTGAGGGTGGTCGAACG 936
|||| | |||| | || | ||||||||||||||||||||| ||| |||| ||| | ||
Sbjct 300 TCCTTTAGACC-AGCA-ACGACTTATCTTTGCTGGTAAACAGCTCGAGGATGGCCTTAC- 356
Query 937 C-TAGCACATTACAACATCCAGAAAGGA-TCAACTCTGTATC-TGGTGACT-AGATTCCG 992
| | || ||||||||||||||||| || |||||||| | | |||| || || || |
Sbjct 357 CTTGGCTGATTACAACATCCAGAAA-GAGTCAACTCTCCA-CTTGGT-TCTGAGGTTGAG 413
Query 993 TTGTGGGATGCAGATTTTTGT-CAAGACCCTTACCGGAAAGAGAAT-AGATTTGGAAGTT 1050
|||| ||||| || ||||| | |||| ||||| ||||||| || | || || ||
Sbjct 414 AGGTGGTATGCAAATCTTTGTGC-AGACTCTTACGGGAAAGACCATAACCCTT-GAGGTC 471
Query 1051 GAGAGCTGGGACACAATAGAAAATGTTAAGGCCATGATTCAGGATAAAGAAGGGATCCAA 1110
| |||| ||||| || || || || ||||||| ||| || ||||||||||| ||||
Sbjct 472 AAAAGCTCAGACACTATCGATAACGTCAAGGCCAAGATCCAAGATAAAGAAGGAATCCTT 531
Query 1111 CC-AGACCTGCAGAGGCTGATCTTTCTC-GGTAAAG-AGCTCAAGGATCGCT-GTACTCC 1166
|| | || |||||| || |||||| | ||| ||| | ||| ||||| | | ||||||
Sbjct 532 CCTCG-CCAGCAGAGACTTATCTTT-GCAGGT-AAGCAACTCGAGGAT-GGTCGTACTCT 587
Query 1167 TGCGGATTACGGCATCCAGAAAGAGTCAACACT-C--C---ACCTT-GTC----C-TTGG 1214
||| |||||| ||||||||||||||||||||| | | |||| ||| | |||
Sbjct 588 TGCCGATTACAACATCCAGAAAGAGTCAACACTGCATCTTGTCCTTCGTCTTTGCGGTGG 647
Query 1215 TATGCAGATATTTGTGA-AACTCTTTGGCGGT-AAAA---T--CA-T-------T-ACCC 1258
||||||||||||||||| || |||| |||| |||| | || | | ||||
Sbjct 648 TATGCAGATATTTGTGAGTAC-CTTTTCCGGTAAAAACTTTACCAGTGACACCCTCACCC 706
Query 1259 TAGAAGTTGTGAGCTCAGACACCATTGAAAGTGTTAAAGCTAAGATTCAAGACAAGGTAG 1318
|| |||||| |||||||||||||||||||| ||| || || ||||||||||||| || ||
Sbjct 707 TAAAAGTTGAGAGCTCAGACACCATTGAAAATGTCAAGGCGAAGATTCAAGACAGGGAAG 766
Query 1319 GTTCACCCCCGGACCAGCAGAGACTGATCTTTCTCGGTCACGAG--C-T---CGAGGATG 1372
||| || ||||||||| ||||| || ||||||| |||| | ||| | | |||||||
Sbjct 767 GTTTACGCCCGGACCACCAGAGGCTTATCTTTCACGGTGAAGAGCTCTTCACCGAGGATA 826
Query 1373 GCCGTACTCTTGCGGATTACGACATCCGGAATGA-GTCAACCCTTCGCCTTTTCTTTCAT 1431
||||||||||||||||||| |||||||||| | |||||||||| ||||| | ||| |
Sbjct 827 ATCGTACTCTTGCGGATTACGGCATCCGGAAT-AGGTCAACCCTTTGCCTTGCCCTTCGT 885
Query 1432 ATTCCCCATGGTATGCAGATATTCGT-CAAGACGTATGCATTTTCCGGTGAA-ACCCCTA 1489
||| | || |||| | ||||| || || || | | | || | || || ||
Sbjct 886 CTTCGCGGTGATATGTATATATTTGTGAAAAACCT-T-C--CTT---AT-AATTCCTTTA 937
Query 1490 CCTGT-AAAACCATT-ACCCTAGAAGTTGAGAGCTCAGACACCATTGATAATGTAAAAGT 1547
|| || |||| | || | |||||||||||||||||||||||||||||| ||||| ||||
Sbjct 938 CCGGTGAAAA-C-TTCATCCTAGAAGTTGAGAGCTCAGACACCATTGACAATGTTAAAGC 995
Query 1548 TAAGATCCAACACAAGGTAGGAATTCCTCTGGACAGACAGAGCCTTATCTTTGGTGGTAG 1607
|||| ||||| |||||| | |||||||| ||||| ||| || |||||||||| |||||
Sbjct 996 TAAGCTCCAAGACAAGGAAAGAATTCCTATGGACCTACATAGACTTATCTTTGCTGGTAA 1055
Query 1608 AGTGCTTGTGGGTACTCGAACGCTA-CTAGATTACAACATCCAGAAAGAATCTACTATCC 1666
| ||||| |||| |||||| ||| | | |||||||||||||||||| ||| ||| |
Sbjct 1056 ACCGCTTGAGGGTGGTCGAACCCTAGC-ACATTACAACATCCAGAAAGGATCAACTCTGT 1114
Query 1667 ATCAGCTGTTTC--TTCAGAGAGGTGGTATGCAGATTTTTATCAAGACCCTTACCGGAAA 1724
||| | || | ||| | | ||| ||||||||||| |||||||||||||| ||||
Sbjct 1115 ATCTGGTGACTAGATTCCGTT-G-TGGGATGCAGATTTTCGTCAAGACCCTTACCAGAAA 1172
Query 1725 AACCATAA-TGTTGGAAGTTGAAAACTCAGACACAATCGCCAATGTGAAGGAAAAGATCC 1783
| |||| | ||||||||||| | || |||||||||| ||||| |||| | | | |
Sbjct 1173 GAGAATAAAT-TTGGAAGTTGAGAGCTGGGACACAATCGAAAATGTAAAGGCCATGGTTC 1231
Query 1784 AAGTTAAGGAAGGGATCACA-CCAGT-CCAA-C----AGAGGCTAATATTT-TTCGGAAA 1835
| | ||| ||||||||| || ||| |||| | ||||||| || ||| || || ||
Sbjct 1232 AGGATAAAGAAGGGATC-CAACCACAACCAAACCTGCAGAGGCTGATCTTTCTT-GGTAA 1289
Query 1836 ACAGCTTGAAG-ATGGC-GTCACT-TTAGGGGATTACTGTATTCATAAAAATTCAACTCT 1892
| |||| ||| |||| || ||| || | ||||||| | || || ||| | ||||| ||
Sbjct 1290 AGAGCTC-AAGGATGGTTGT-ACTCTT-GCGGATTACAGCATCCAGAAAGAGTCAACACT 1346
Query 1893 -CTACCTTGT 1901
| |||||||
Sbjct 1347 TC-ACCTTGT 1355
Score = 409 bits (221), Expect = 7e-113
Identities = 768/1019 (75%), Gaps = 89/1019 (9%)
Strand=Plus/Plus
Query 224 ATTACAACATCCAG-AAGGAGTCCACTCTCCACT-TGGT-TCTAAGGCTCAGTGGTGGTA 280
|||||||||||||| ||||| || ||||| | | |||| || || || || |||| |
Sbjct 1085 ATTACAACATCCAGAAAGGA-TCAACTCTGTA-TCTGGTGACT-AGATTCCGTTGTGGGA 1141
Query 281 TGCAAATCTTT-GTGAAGACTCTTACGGGAAAGACCATAACTCTT-GAGGTGGAGAGCTC 338
|||| || ||| || ||||| ||||| |||||| |||| | || || || |||||||
Sbjct 1142 TGCAGAT-TTTCGTCAAGACCCTTACCAGAAAGAGAATAAAT-TTGGAAGTTGAGAGCTG 1199
Query 339 TGACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAAGAA-GGA---ATCC-C-TCC 392
||||| || || || || ||||||| | | || ||||||||| ||| | || | ||
Sbjct 1200 GGACACAATCGAAAATGTAAAGGCCATGGTTCAGGATAAAGAAGGGATCCAACCACAACC 1259
Query 393 GGACCAGCAGAGGCTGATCTTTGC-AGGT-AAGCAACTCGAGGATGGCCATACTCTTGCG 450
||| |||||||||||||||| | ||| ||| | ||| ||||||| ||||||||||
Sbjct 1260 AAACCTGCAGAGGCTGATCTTT-CTTGGTAAAG-AGCTCAAGGATGGTTGTACTCTTGCG 1317
Query 451 GATTACAGCATCCAGAAAGAGTCAACACTTCACCTTGTCCTTCGTCTTCGCGGTGGTATG 510
||||||||||||||||||||||||||||||||||||| || | | |||||||
Sbjct 1318 GATTACAGCATCCAGAAAGAGTCAACACTTCACCTTG----TC--C-T-----TGGTATG 1365
Query 511 CAGATATTTGTGATAAC-CTTTCCCGGTAAAAACTTTACCGGTGAAACCCTCACCCTAGA 569
||||||||||||| ||| |||| |||| |||| | | | | ||||||||
Sbjct 1366 CAGATATTTGTGA-AACTCTTTGGCGGT-AAAA---T--C------A---TTACCCTAGA 1409
Query 570 AGTTGAGAGCTCAGACACCATTGACAGTGTCAAGGCGAAGATTCAAGATAGGGAAGGTTT 629
|||| |||||||||||||||| | ||||| || || ||||||||||| | || |||||
Sbjct 1410 AGTTTTGAGCTCAGACACCATTAAAAGTGTTAAAGCTAAGATTCAAGACAAGGTAGGTTC 1469
Query 630 ACGCCCGGACCACCAGAGGCTCAGC--TTTCACGGTGAAGAGCTCTTCACCAAGGATGGC 687
|| ||||||||| |||| || || |||| |||| | || | | || ||||||||
Sbjct 1470 ACCCCCGGACCAGCAGATACT--GCTTTTTCGCGGT---G-GC-CAACTCC-AGGATGGC 1521
Query 688 CGTACTCTTGCCGATTACGGCATCCAGAATAAGTCAGCCCTTCACCTTGGCACTCGTCTT 747
|||||||||| |||||| ||||| |||| ||||| ||||||||||| | || | ||
Sbjct 1522 CGTACTCTTGGGGATTACAACATCCGGAATGAGTCAACCCTTCACCTTTTCTTTCATATT 1581
Query 748 CGCGGTAATATGTATATATTTGTGAA-A-A---AC-CTTCCCTAT-AATACCTTTACCGG 800
||| | |||| | ||||| || || | | | || || | || ||| |||| |
Sbjct 1582 CGCCATGGTATGCAGATATTCGTCAAGACATTTTCATTTTCCGGTGAA-ACCCCTACCTG 1640
Query 801 TGAAAA-C-TTCATC-CTAGAAGTTGAGAGCTCAGACACCATTGACAATGTTAAAGCTAA 857
| |||| | || | | ||||||||||||||||||||||||||||| ||||| |||| |||
Sbjct 1641 T-AAAACCATT-A-CTCTAGAAGTTGAGAGCTCAGACACCATTGATAATGTAAAAGTTAA 1697
Query 858 GATCCAAGAAAAGGAAGGAATTCCTATGGACCTACATAGACTTATCTTTGCTGGTAAACC 917
||||||| | |||| |||||||||| ||||| ||| ||||||||||||| ||||| |
Sbjct 1698 GATCCAACACAAGGTAGGAATTCCTCTGGACAGACAGAGACTTATCTTTGGTGGTAGAGT 1757
Query 918 GCTTGAGGGTGGTCGAACGCTAGC-ACATTACAACATCCAGAAAGGATCAACTCTGTATC 976
||||| |||| ||||||||||| | | |||||||||||||||||||||||||| | |||
Sbjct 1758 GCTTGTGGGTAGTCGAACGCTA-CTAGATTACAACATCCAGAAAGGATCAACTATCCATC 1816
Query 977 TGGTGACTAGATTCCGTT-G-TGGGATGCAGATTTTTGTCAAGACCCTTACCGGAAAGAG 1034
| | | | ||| | | ||| |||||||||||| ||||||| ||||||||||| |
Sbjct 1817 AGCT-ATTTC-TTCAGAGAGGTGGTATGCAGATTTTTATCAAGACTCTTACCGGAAAAAC 1874
Query 1035 AATAGATTT-GGAAGTTGAGAGCTGGGACACAATAGAAAATGTTAAGGCCATGATTCAGG 1093
||| |||| ||||||||| |||| ||||| || | ||||| |||| | ||| || |
Sbjct 1875 CATA-ATTTTGGAAGTTGAAAGCTCAGACACGATCGCCAATGTAAAGGAAAAGATCCAAG 1933
Query 1094 ATAAAGAAGGGATCCAACCAGACCTGCAGAGGCTGATCTTTCTCGGTA-AAGAGCTC-AA 1151
||| ||||| ||| ||||||||| |||| ||| || ||| |||| | || |||| ||
Sbjct 1934 TTAAGGAAGGAATCAAACCAGACCAACAGATGCTAATATTTTTCGG-ACAACAGCTTGAA 1992
Query 1152 GGATCGCTGT-ACTCCT-GCGGATTACGGCATCCAGAAAGAGTCAACACTCCACCTTGT 1208
| || || || ||| | | |||||||| || || ||| ||||||| || |||||||
Sbjct 1993 G-ATGGC-GTCACTT-TAGGGGATTACGATATTCATAAAAAGTCAACTCTTTACCTTGT 2048
Score = 219 bits (118), Expect = 1e-55
Identities = 349/455 (77%), Gaps = 37/455 (8%)
Strand=Plus/Plus
Query 199 CTCGAGGATGGCCTTAC-CTTGGCTGATTACAACATCCAGAAGGAGTCCACTCTCCA-CT 256
||||||||||| | ||| ||| || ||||||||||||||||| ||||| || || || ||
Sbjct 568 CTCGAGGATGGTCGTACTCTT-GCCGATTACAACATCCAGAAAGAGTCAACACTGCATCT 626
Query 257 TGGTTCTAAGGCTCAGTGGTGGTATGCAAATCTTTGTGAAG-A-CTCTTACGG--GAAA- 311
| || || | || | ||||||||||| || |||||| || | || || ||| |||
Sbjct 627 T-GTCCTTCGTCTTTGCGGTGGTATGCAGATATTTGTG-AGTACCTTTTCCGGTAAAAAC 684
Query 312 --GACCA-T-A-A--CT----CTTGAGGTGGAGAGCTCTGACACCATTGACAACGTCAAG 360
|||| | | | || || | || |||||||| ||||||||||| || ||||||
Sbjct 685 TTTACCAGTGACACCCTCACCCTAAAAGTTGAGAGCTCAGACACCATTGAAAATGTCAAG 744
Query 361 GCCAAGATCCAAGATAAAGAAGGAAT-CCCTCCGGACCAGCAGAGGCTGATCTTTGCA-G 418
|| ||||| ||||| | ||||| | | | |||||||| |||||||| |||||| || |
Sbjct 745 GCGAAGATTCAAGACAGGGAAGGTTTACGC-CCGGACCACCAGAGGCTTATCTTT-CACG 802
Query 419 GT--A-AG--C--AACTCGAGGATGGCCATACTCTTGCGGATTACAGCATCCAGAA-AGA 470
|| | || | || ||||||| | |||||||||||||||| |||||| ||| ||
Sbjct 803 GTGAAGAGCTCTTCAC-CGAGGATAATCGTACTCTTGCGGATTACGGCATCCGGAATAG- 860
Query 471 GTCAACACTTCACCTTGTCCTTCGTCTTCGCGGTGGTATGCAGATATTTGTG-ATAACCT 529
|||||| ||| ||||| ||||||||||||||||| |||| | ||||||||| | ||||
Sbjct 861 GTCAACCCTTTGCCTTGCCCTTCGTCTTCGCGGTGATATGTATATATTTGTGAAAAACC- 919
Query 530 TTCCCGGTAAAAACTTTACCGGTGAAACCCTCACCCTAGAAGTTGAGAGCTCAGACACCA 589
|||| ||| |||||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct 920 TTCCTTATAATTCCTTTACCGGTGAAAACTTCATCCTAGAAGTTGAGAGCTCAGACACCA 979
Query 590 TTGACAGTGTCAAGGCGAAGATTCAAGATAGGGAA 624
|||||| ||| || || ||| | ||||| | ||||
Sbjct 980 TTGACAATGTTAAAGCTAAGCTCCAAGACAAGGAA 1014
Score = 185 bits (100), Expect = 1e-45
Identities = 271/352 (77%), Gaps = 18/352 (5%)
Strand=Plus/Plus
Query 276 TGGTATGCAAATCTTTGTGAAGACTC-TT-ACGGGAAAGACCATAACTCTTGAGGTGGAG 333
||||||||| || |||||||| |||| || ||| ||| | ||| || || || || |
Sbjct 1359 TGGTATGCAGATATTTGTGAA-ACTCTTTGGCGGTAAA-ATCATTACCCTAGAAGTTTTG 1416
Query 334 AGCTCTGACACCATTGACAA-CGTCAAGGCCAAGATCCAAGATAAAGAAGGAATC-CCTC 391
||||| ||||||||| | || || || || ||||| ||||| || | ||| || || |
Sbjct 1417 AGCTCAGACACCATT-AAAAGTGTTAAAGCTAAGATTCAAGACAAGGTAGG-TTCACCCC 1474
Query 392 CGGACCAGCAGAGGCTGATCTTT-GCAGGTAAG-CAACTCGAGGATGGCCATACTCTTGC 449
|||||||||||| ||| | ||| || ||| | |||||| ||||||||| ||||||||
Sbjct 1475 CGGACCAGCAGATACTGCTTTTTCGC-GGT-GGCCAACTCCAGGATGGCCGTACTCTTGG 1532
Query 450 GGATTACAGCATCCAGAAAGAGTCAACACTTCACCTTGTCCTTCGTCTTCGCGGTGGTAT 509
|||||||| ||||| ||| |||||||| ||||||||| || ||| | ||||| ||||||
Sbjct 1533 GGATTACAACATCCGGAATGAGTCAACCCTTCACCTTTTCTTTCATATTCGCCATGGTAT 1592
Query 510 GCAGATATTTGT---G--A-TAACCTTTCCCGGTAAAAACTTTACCGGTGAAACCCTCAC 563
||||||||| || | | | | ||| ||||| ||| | |||| || ||||| | ||
Sbjct 1593 GCAGATATTCGTCAAGACATTTTCATTTTCCGGTGAAACCCCTACCTGTAAAACCATTAC 1652
Query 564 CCTAGAAGTTGAGAGCTCAGACACCATTGACAGTGTCAAGGCGAAGATTCAA 615
||||||||||||||||||||||||||||| | ||| || | ||||| |||
Sbjct 1653 TCTAGAAGTTGAGAGCTCAGACACCATTGATAATGTAAAAGTTAAGATCCAA 1704
Score = 180 bits (97), Expect = 6e-44
Identities = 194/235 (83%), Gaps = 30/235 (13%)
Strand=Plus/Plus
Query 1 TCTGCAGAAGTTTTCTGTGAAGTAct-ct-ctctctctcAAGGTATTTGTTTCTCCGATC 58
|||||| ||||||||||||||||||| || |||||||||||||||||||||||| | |||
Sbjct 40 TCTGCAAAAGTTTTCTGTGAAGTACTACTACTCTCTCTCAAGGTATTTGTTTCTTCTATC 99
Query 59 TCTTCTC-T--TC----AT---C----CTTTTTGGCTCTTACCATTCA-AA-------AT 96
||||||| | || | | |||||||| |||||||||||| || |
Sbjct 100 TCTTCTCATCATCTTTTTTCGCCTGATCTTTTTGGTTCTTACCATTCAGAATCCTCCTTT 159
Query 97 C-CT-CC----AAAAAATTGTTTACAGATGACAATCCAAATCTACGCAAAGACTCTTACA 150
| || || |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 160 CTCTCCCATAAAAAAAATTGTTTACAGATGACAATTCAAATCTACGCAAAGACTCTTACA 219
Query 151 GAAAAGACCATAACACTTGATGTTGAAACCTCCGACTCCATCCATGATCTCGAGG 205
||||||||||||||||||||||||||||||||||||||||| ||| || || |||
Sbjct 220 GAAAAGACCATAACACTTGATGTTGAAACCTCCGACTCCATTCATAATGTCAAGG 274
> AT5G20620.1 | Symbols: UBQ4 | ubiquitin 4 | chr5:6973071-6974946
REVERSE LENGTH=1491
Length=1491
Score = 457 bits (247), Expect = 2e-127
Identities = 889/1182 (75%), Gaps = 112/1182 (9%)
Strand=Plus/Plus
Query 280 ATGCAAATCTTT-GTGAAGACTCTTACGGGAAAGACCATAACTCTTGAGGTGGAGAGCTC 338
|||||||| ||| ||||| || || || || |||||||| ||||| ||||| ||||||||
Sbjct 99 ATGCAAAT-TTTCGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTC 157
Query 339 TGACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAAGAAGGAATCCCTCCGGACCA 398
||||||||| ||||| || ||||| |||||||| || || ||||| || ||||| |||||
Sbjct 158 TGACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCA 217
Query 399 GCAGAGGCTGATCTTTGCAGGTAAGCAACTCGAGGATGGCCATACTCTT-GCGGATTACA 457
||| || ||||||| || |||||||| || || ||||||| || ||| || |||||||
Sbjct 218 GCAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGCAC-CTTGGCTGATTACA 276
Query 458 GCATCCAGAAAGAGTCAACACTTCACCTT-GTCCTTC--GTCTTCGCGGTGGTATGCAGA 514
|||||||||||| |||||||| || ||| || | || || | | |||||||||||||
Sbjct 277 ACATCCAGAAAGAATCAACACTCCA-CTTGGTTC-TCAGGT-TAAGAGGTGGTATGCAGA 333
Query 515 TATTTGTGATA-ACCTTTCCCGGTAAAAACTTTACCGGTGAAACCCTCACCCTAGAAGTT 573
| ||||| | | | | | | | || | || ||||| | ||| | || |||
Sbjct 334 TCTTTGTCA-AGA-C--T--C--T---GAC--T---GGCAAAACCATTACCTTGGAGGTT 377
Query 574 GAGAGCTCAGACACCATTGACAGTGTCAAGGCGAAGATTCAAGATAGGGAAGGTTTACGC 633
|| ||||| ||||| ||||||| |||||||| ||||| || || | |||||| | | |
Sbjct 378 GAAAGCTCTGACACTATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAAT-CCC 436
Query 634 -CCGGACCACCAGAGGCTCAGCTTTCAC-GGTGAAG-AGCTCTTCACCAAGGATGGCCGT 690
|||||||| || || || | |||| | ||| ||| || ||| || ||||| |
Sbjct 437 TCCGGACCAGCAAAGACTTA-TTTTCGCTGGT-AAGCAG--CTT---GAA-GATGGAAGG 488
Query 691 ACTCTTGCCGATTACGGCATCCAGAATAAGTC-AGCCCTTCACCTTGGCAC-TCGTCTTC 748
|||||||| || ||| ||||| || |||| | | |||||||||| | | |||||| |
Sbjct 489 ACTCTTGCTGACTACAATATCCAAAAGGAGTCTA-CTCTTCACCTTGTC-CTTCGTCTCC 546
Query 749 GCGGTAATATGTATATATTTGTGAAAAACCTTCCCTATAATACCTTTACCGGTGAAAAC- 807
| ||| |||| | || |||||| || | | | | | || ||| |||||
Sbjct 547 GTGGTGGTATGCAAATCTTTGTG-AAGA------C-----T--C-TGACGGGT-AAAACA 590
Query 808 TTCATCCTAGAAGTTGAGAGCTCAGACACCATTGACAATGTTAAAGCTAAGATCCAAGA- 866
||| ||| || ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 591 ATCACCCTTGAGGTTGAGAGCTCAGACACCATTGACAATGTCAAAGCTAAGATCCAAGAT 650
Query 867 AAAGGAAGGAATTCCTA-TGGACCTA-CATAGACTTATCTTTGCTGGTAAACCGCTTGAG 924
||| || |||| ||| | ||||| | || || ||||||||||| ||||| | ||| |||
Sbjct 651 AAA-GAGGGAA-TCCCACCGGACC-AGCAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAG 707
Query 925 GGTGGTCGAACGCTAGCACATTACAACATCCAGAAAGGA-TCAACTCTGT-ATCTGGTGA 982
| |||||| || || || ||||||||||||| ||| || ||||| || | || |||||
Sbjct 708 GATGGTCGCACTCTTGCTGATTACAACATCCA-AAAAGAGTCAACCCT-TCATTTGGTG- 764
Query 983 C-TAGAT-TCCGTTGTGGGATGCAGATTTTTGTCAAGACCCTTACC-GGAAAGAGAAT-A 1038
| | | | | | |||| |||||||||||||| |||||| ||| | || |||| || |
Sbjct 765 CTTCG-TCTGAGAGGTGGTATGCAGATTTTTGTGAAGACC-TTAACTGGCAAGACTATCA 822
Query 1039 GATTTGGAAGTTGAGAGCTGGGACACAATAGAAAATGTTAAGGCCATGATTCAGGATAAA 1098
|||||| |||||||||| |||||||| || ||||| ||||| | |||||| || ||
Sbjct 823 C-TTTGGAGGTTGAGAGCTCAGACACAATCGATAATGTCAAGGCAAAGATTCAAGACAAG 881
Query 1099 GAAGGGAT-CCAACCAGACCTGCAGAGGCTGATCTTT-CTCGGTAAAGAGCTC-AAGGAT 1155
|||||||| ||| ||||| | |||||| || || ||| || || ||| |||| ||| ||
Sbjct 882 GAAGGGATTCCA-CCAGATCAGCAGAGACTCATATTTGCT-GGAAAACAGCTTGAAG-AT 938
Query 1156 CG-CTGTACTC-CTGCGGATTACGGCATCCAGAAAG-AGTCAACACTCCA-C-----CTT 1206
| | | || | | || |||||| |||||| |||| |||| || ||||| | |||
Sbjct 939 GGAC-GCACACTC-GCTGATTACAACATCCA-AAAGGAGTCTACCCTCCATCTTGTGCTT 995
Query 1207 -GTC-C--T--TGGTATGCAGATATTTGTGAA-ACTCTTTGGCGGTAAAATCATTACCCT 1259
||| | | ||||||||||||||||||||| || ||| ||| |||| |||||| ||
Sbjct 996 CGTCTCCGTGGTGGTATGCAGATATTTGTGAAGACCCTTAC-CGGAAAAACCATTACTCT 1054
Query 1260 AGAAGTTGTGAGCTCAGACACCATTGA-AAGTGTTAAAGCTAAGATTCAAGACAAGGTAG 1318
|| |||| |||||||||||| ||||| || ||| || ||||||||||| ||||||| ||
Sbjct 1055 TGAGGTTGAGAGCTCAGACACAATTGATAA-TGTCAAGGCTAAGATTCAGGACAAGGAAG 1113
Query 1319 GT-TCACCCCCGGACCAGCAGAGACTGATCTTT-CTCGGTCA-CGAGCTCGAGGATGGCC 1375
| || || |||||||| |||||||| ||||| || || | | |||| |||||||| |
Sbjct 1114 GGATC-CCACCGGACCAACAGAGACTCATCTTCGCTGGGA-AGC-AGCTTGAGGATGGTC 1170
Query 1376 GTACTCTTGCGGATTACGACATCCGGAATGAGTCAACCCTTC 1417
| |||||||| |||||| |||||| ||| ||||| || ||||
Sbjct 1171 GGACTCTTGCAGATTACAACATCCAGAAGGAGTCGACTCTTC 1212
Score = 387 bits (209), Expect = 3e-106
Identities = 591/767 (77%), Gaps = 59/767 (8%)
Strand=Plus/Plus
Query 216 CTTGGCTGATTACAACATCCAGAAGGAGTCCACTCTCCA-CTTGGTTCTAAGGCTCAGTG 274
||| ||||| ||||| ||||| |||||||| ||||| || ||| || || | ||| |||
Sbjct 492 CTT-GCTGACTACAATATCCAAAAGGAGTCTACTCTTCACCTT-GTCCTTCGTCTCCGTG 549
Query 275 GTGGTATGCAAATCTTTGTGAAGACTCTTACGGG-AAAGACCATAACTCTTGAGGTGGAG 333
|||||||||||||||||||||||||||| ||||| ||| || || || |||||||| |||
Sbjct 550 GTGGTATGCAAATCTTTGTGAAGACTCTGACGGGTAAA-ACAATCACCCTTGAGGTTGAG 608
Query 334 AGCTCTGACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAAGAAGGAATCCCTCCG 393
||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||| |||
Sbjct 609 AGCTCAGACACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCG 668
Query 394 GACCAGCAGAGGCTGATCTTTGCAGGTAAGCAACTCGAGGATGGCCATACTCTTGCGGAT 453
|||||||||||||| |||||||| |||||||| || |||||||| | |||||||| |||
Sbjct 669 GACCAGCAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGAT 728
Query 454 TACAGCATCCAGAAAGAGTCAACACTTCACCTTG-TCCTTCGTCTTCGCGGTGGTATGCA 512
|||| |||||| ||||||||||| ||||| ||| | |||||||| | |||||||||||
Sbjct 729 TACAACATCCAAAAAGAGTCAACCCTTCAT-TTGGTGCTTCGTCTGAGAGGTGGTATGCA 787
Query 513 GATATTTGTGATA-ACCTTTCCCGGTAAAAACTTTACCGGTGAAACCCTCACCCTAGAAG 571
||| ||||||| | ||||| | || || | || | | | | | | || |
Sbjct 788 GATTTTTGTGA-AGACCTTAACTGGCAAGA-CTAT-C-----A--CT-T-----TGGAGG 831
Query 572 TTGAGAGCTCAGACACCATTGACAGTGTCAAGGCGAAGATTCAAGATAGGGAAGGT-TTA 630
|||||||||||||||| || || | ||||||||| ||||||||||| | |||||| ||
Sbjct 832 TTGAGAGCTCAGACACAATCGATAATGTCAAGGCAAAGATTCAAGACAAGGAAGGGATTC 891
Query 631 CGCCCGGACCACCAGAGGCTCAGCTTT-CACGGTGAAGAGCTCTTCACCAAGGATGGCCG 689
| || | | || ||||| |||| ||| | || || |||| | | | | |||| ||
Sbjct 892 CACCAG-ATCAGCAGAGACTCATATTTGCT-GGAAAACAGCT-TG-A--A-G-ATGGACG 943
Query 690 TACTCTTGCCGATTACGGCATCCAGAATAAGTC-AGCCCTTCACCTTG-GCACTCGTCTT 747
|| || || |||||| |||||| || |||| | |||| || |||| || ||||||
Sbjct 944 CACACTCGCTGATTACAACATCCAAAAGGAGTCTA-CCCTCCATCTTGTGCT-TCGTCTC 1001
Query 748 CGCGGTAATATGTATATATTTGTGAAAAACCTTCCCT-ATAATACCTTTACCGGTGAAAA 806
|| ||| |||| | ||||||||||| | |||| || | || ||| |||| |
Sbjct 1002 CGTGGTGGTATGCAGATATTTGTGAAGACCCTTACCGGAAAA-ACCATTAC---T----- 1052
Query 807 CTTCATCCTAGAAGTTGAGAGCTCAGACACCATTGACAATGTTAAAGCTAAGATCCAAGA 866
||| | | ||||||||||||||||| ||||| ||||| || |||||||| || ||
Sbjct 1053 CTTGA-----G--GTTGAGAGCTCAGACACAATTGATAATGTCAAGGCTAAGATTCAGGA 1105
Query 867 AAAGGAAGGAATTCCTAT-GGACCTACATAGACTTATCTTTGCTGGTAAACCGCTTGAGG 925
|||||||| || || | ||||| ||| ||||| ||||| ||||| || | ||||||||
Sbjct 1106 CAAGGAAGGGATCCC-ACCGGACCAACAGAGACTCATCTTCGCTGGGAAGCAGCTTGAGG 1164
Query 926 GTGGTCGAACGCTAGCACATTACAACATCCAGAAAGGA-TCAACTCT 971
|||||| || || ||| |||||||||||||||| ||| || |||||
Sbjct 1165 ATGGTCGGACTCTTGCAGATTACAACATCCAGAA-GGAGTCGACTCT 1210
> AT5G37640.1 | Symbols: UBQ9 | ubiquitin 9 | chr5:14952782-14953750
REVERSE LENGTH=969
Length=969
Score = 375 bits (203), Expect = 7e-103
Identities = 516/662 (78%), Gaps = 42/662 (6%)
Strand=Plus/Plus
Query 794 TTACCGGTGAAAA-C-TTCATCCTAGAAGTTGAGAGCTCAGACACCATTGACAATGTTAA 851
|||||||| |||| | || | ||| ||||||||||| |||||||| ||||||||||||||
Sbjct 257 TTACCGGT-AAAACCATT-ACCCTTGAAGTTGAGAGTTCAGACACTATTGACAATGTTAA 314
Query 852 AGCTAAGATCCAAGAAAAGGAAGGAATTCCTATGGACCTACATAGACTTATCTTTGCTGG 911
||||||||||||||| ||||||||| | ||| ||| | ||| ||||| |||||||||||
Sbjct 315 AGCTAAGATCCAAGACAAGGAAGGAGTCCCTCCGGATCAACAGAGACTAATCTTTGCTGG 374
Query 912 TAAACCGCTTGAGGGTGGTCGAACGCTAGCACATTACAACATCCAGAAAGGATCAACTCT 971
||||| |||||| | |||||| || || ||| |||||||||||||||||| |||||||||
Sbjct 375 TAAACAGCTTGACGATGGTCGCACTCTTGCAGATTACAACATCCAGAAAGAATCAACTCT 434
Query 972 GTATCT-GGTGACT-AGATTCCGTTGTGGGATGCAGATTTTTGTCAAGACCCTTACCGGA 1029
| || ||| || || || | |||| |||||||||||||||| ||| |||||| ||
Sbjct 435 CCA-CTTGGTT-CTCAGGTTGAGAGGTGGTATGCAGATTTTTGTCAGGACACTTACCCGA 492
Query 1030 AAGAGAATAGATTTGGAAGTTGAGAGCTGGGACACAATAGAAAATGTTAAGGCCATGATT 1089
|| | |||| ||||||||||||||||| ||||||| || ||||| ||||||| |||
Sbjct 493 AAAACCATAGCTTTGGAAGTTGAGAGCTCTGACACAACCGATAATGTGAAGGCCAAGATA 552
Query 1090 CAGGATAAAGAAGGGATCCAACCAGACCTGCAGAGGCTGATCTTT-CTCGGTAAAGAGCT 1148
|| || ||||||||||||| |||||||| ||||| || |||||| | || ||| | ||
Sbjct 553 CAAGACAAAGAAGGGATCCCACCAGACCAACAGAGACTTATCTTTGCA-GGCAAACAACT 611
Query 1149 C-AAGGATCG-CTGTACTCCTGCGGATTACGGCATCCAGAAAGAGTCAACACTCCACCT- 1205
| ||| || | | | || | ||| |||||| ||||||||| ||||||||||| || ||
Sbjct 612 CGAAG-ATGGTCGG-ACGCTTGCTGATTACAACATCCAGAAGGAGTCAACACTTCATCTC 669
Query 1206 -TG-T-C--CTT-G-G-T---ATGCAGATATTTGTGAAACTCTTTGGCGGTAAA-ATCAT 1253
|| | | ||| | | | |||||||||||||| || | ||||| ||| ||| | |||
Sbjct 670 GTGCTGCGTCTTTGTGGTGGGATGCAGATATTTGTCAA-CACTTTGACGGGAAAGACCAT 728
Query 1254 TACCCTAGAAGTTGTGAGCTCAGACACCATTGA-AAGTGTTAAAGCTAAGATTCAAGACA 1312
|| || ||||| | |||||| || || ||||| || ||| || || |||||||| ||||
Sbjct 729 CACACTTGAAGTGGAGAGCTCTGATACGATTGACAA-TGTGAAGGCCAAGATTCAGGACA 787
Query 1313 AGGTA-GGTTCACCCCCGGACCAGCAGAGACTGATCTTT-CTCGGTC-A-CGAGCTCGAG 1368
| | | || || | |||||||| ||||| || |||||| | || | | | |||| ||
Sbjct 788 AAGAAAGGATC-CAACCGGACCAACAGAGGCTAATCTTTGCA-GG-CGAGC-AGCTTGAA 843
Query 1369 GATGGCCGT-ACTCTT--GCGGATTACGACATCCGGAATGAGTCAACCCTTCGCCTT-TT 1424
||||| | || ||| ||||||||| | |||| ||| |||||||| |||| |||| ||
Sbjct 844 GATGGTTATTACACTTTAGCGGATTACAATATCCAGAAAGAGTCAACTCTTCACCTTGTT 903
Query 1425 CT 1426
||
Sbjct 904 CT 905
> AT4G05050.1 | Symbols: UBQ11 | ubiquitin 11 | chr4:2588004-2589386
REVERSE LENGTH=1049
Length=1049
Score = 351 bits (190), Expect = 1e-95
Identities = 448/565 (79%), Gaps = 47/565 (8%)
Strand=Plus/Plus
Query 202 GAGGATGGCCTTACCTTGGCTGATTACAACATCCAGAAGGAGTCCACTCTCCACTTGGTT 261
|||||||||| || ||||| |||||||| ||||||||||| ||||| ||||||||||||
Sbjct 243 GAGGATGGCCGCACGTTGGCGGATTACAATATCCAGAAGGAATCCACCCTCCACTTGGTT 302
Query 262 CTAAGGCTCAGTGGTGGTATGCAAATCTTT-GTGAAGACTCTTACGGGAAAGACCATAAC 320
|| |||||| ||||||||||||| || ||| || || || || ||||||||||| || ||
Sbjct 303 CTCAGGCTCCGTGGTGGTATGCAGAT-TTTCGTTAAAACCCTAACGGGAAAGACGATTAC 361
Query 321 TCTTGAGGTGGAGAGCTCTGACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAAGA 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 362 TCTTGAGGTGGAGAGCTCTGACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAGGA 421
Query 381 AGGAATCCCTCCGGACCAGCAGAGGCTGATCTTTGCAGGTAAGCAACTCGAGGATGGCCA 440
|| || |||||||||||||||||| ||||||| || || |||||||| ||||| ||| |
Sbjct 422 GGGTATTCCTCCGGACCAGCAGAGGTTGATCTTCGCCGGAAAGCAACTTGAGGACGGC-A 480
Query 441 TA-CTCTTG-CGGATTACAGCATCCAGAAAGAGTCAACACTTCACCTTG-TCCTT-CGTC 496
| || ||| ||||||||| ||||||||| ||||| || ||||| ||| || || ||||
Sbjct 481 GAACT-TTGGCGGATTACAACATCCAGAAGGAGTCTACGCTTCAT-TTGGTC-TTGCGTC 537
Query 497 TTCGCGGTGGTATGCAGATATTTGTGATAACCTTTCCCGGTAAAAACTTT-ACCGGTGAA 555
| || || ||||||||||| | || | | |||| ||||| ||||| ||
Sbjct 538 TGCGTGGAGGTATGCAGAT-----------C-TT-C--G-TAAAGACTTTGACCGGA-AA 580
Query 556 -ACCCTCACCCTAGAAGTTGAGAGCTCAGACACCATTGACAGTGTCAAGGCGAAGATTCA 614
||| |||| || |||||||||||||| ||||||||||| | || ||||| ||||| ||
Sbjct 581 GACCATCACTCTTGAAGTTGAGAGCTCCGACACCATTGATAACGTGAAGGCTAAGATCCA 640
Query 615 AGATAGGGAAGGT-TTACGCCCGGACCACCAGAGGCTCAGCTTTCACGGTGAAGAGCT-C 672
|| | |||||| || | || |||||| ||| | |||| ||| | | | ||| ||| |
Sbjct 641 GGACAAGGAAGGCATTCCTCC-GGACCAGCAGCGTCTCATCTT-CGCTG-GAA-AGCAGC 696
Query 673 TTCACCAAGGATGGCCGTACTCTTG-CCGATTACGGCATCCAGAATAAGTC-AGCCCTTC 730
|| | |||||| |||||| ||| |||| ||| ||||||||| |||| | | ||||
Sbjct 697 TTGA----GGATGGACGTACT-TTGGCCGACTACAACATCCAGAAGGAGTCTA-CTCTTC 750
Query 731 ACCTTGG-CACTC-GTCTTCGCGGT 753
|| |||| | ||| |||| || |||
Sbjct 751 AC-TTGGTC-CTCCGTCTCCGTGGT 773
> AT4G05320.2 | Symbols: UBQ10 | polyubiquitin 10 | chr4:2718170-2720308
FORWARD LENGTH=1835
Length=1835
Score = 272 bits (147), Expect = 9e-72
Identities = 258/311 (83%), Gaps = 10/311 (3%)
Strand=Plus/Plus
Query 202 GAGGATGGCCTTACCTTGGCTGATTACAACATCCAGAAGGAGTCCACTCTCCACTTGGT- 260
|||||||| | ||| ||||| ||||||||||||||||||||||| || || ||||||||
Sbjct 1148 GAGGATGGTCGTACTTTGGCGGATTACAACATCCAGAAGGAGTCGACCCTTCACTTGGTG 1207
Query 261 TCTAAGGCT-CAGTGGTGGTATGCAAATCTTTGTGAAGACTCTT-ACGGGAAAGACCATA 318
| | | || | |||| |||||||| ||||| || |||||| || || |||||||||||
Sbjct 1208 T-TGCGTCTGC-GTGGAGGTATGCAGATCTTCGTCAAGACT-TTGACCGGAAAGACCATC 1264
Query 319 ACTCTTGAGGTGGAGAGCTCTGACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAA 378
|| ||||| ||||| ||||| |||||||||||||||||||||||||||||||| || ||
Sbjct 1265 ACCCTTGAAGTGGAAAGCTCCGACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAG 1324
Query 379 GAAGGAATCCCTCCGGACCAGCAGAGGCTGATCTTTGCAGGTAAGCAACTCGAGGATGGC 438
||||| || ||||||||||||||| | || ||||| || || ||||| || ||||||||
Sbjct 1325 GAAGGTATTCCTCCGGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGA 1384
Query 439 CATACTCTTG-CGGATTACAGCATCCAGAAAGAGTCAACACTTCACCTTG-TCCTTCGTC 496
| |||| ||| | || |||| ||||||||| ||||| || |||||| ||| |||| ||||
Sbjct 1385 CGTACT-TTGGCCGACTACAACATCCAGAAGGAGTCTACTCTTCAC-TTGGTCCTGCGTC 1442
Query 497 TTCGCGGTGGT 507
|||| ||||||
Sbjct 1443 TTCGTGGTGGT 1453
> AT1G55060.1 | Symbols: UBQ12 | ubiquitin 12 | chr1:20549533-20550225
FORWARD LENGTH=693
Length=693
Score = 176 bits (95), Expect = 8e-43
Identities = 340/455 (75%), Gaps = 29/455 (6%)
Strand=Plus/Plus
Query 1470 ATTTTCCGGTGAA-ACCCCTACCTGTAAAACCATTACCCTAGAAGTTGAGAGCTCAGACA 1528
||||| | ||||| |||| |||| | ||||||||||||||||||||||||||||| || |
Sbjct 235 ATTTT-C-GTGAAGACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAGAGCTCTGATA 292
Query 1529 CCATTGATAATGTAAAAGTTAAGATCCAACACAAGGTAGGAATTCCTCTGGAC-AGACAG 1587
| || ||||| | || | ||||| || |||| | ||| || || | ||| | ||||
Sbjct 293 CAATCGATAACCTGAAGGCCAAGATTCAGGACAAAGAAGGGATCCCACCAGACCA-ACAG 351
Query 1588 AGCCTTATCTTTGGTGGTAGAGT-GCTTGTGGGTACTCGAACGCTA-CTAGATTACAACA 1645
|| || ||||||| || | || ||| | | | ||| || || | |||||||||||
Sbjct 352 AGACTCATCTTTGCAGGAA-AGCAGCTCGAAGATGGTCGGACTCTTGC-AGATTACAACA 409
Query 1646 TCCAGAAAGAA-TCTACTA-TCCATCA-G--CTGTTTCTTCAGAGAGGTGGTATGCAGAT 1700
|||| |||| | || || | | || | | ||| ||||| | | | ||| ||||||||
Sbjct 410 TCCA-AAAGGAGTCAAC-ACTTCACCTTGTGCTGCGTCTTC-GTG-G-TGGGATGCAGAT 464
Query 1701 TTTTATCAAGACCCTT-ACCGGAAAAACCATAATG-TTGGAAGTTGAAAACTCAGACACA 1758
||| | ||||| || || ||||| ||||| | | ||| |||| |||| ||| || ||
Sbjct 465 TTTCGTAAAGACT-TTGACGGGAAAGACCATCACGCTTG-AAGTGGAAAGCTCTGATACG 522
Query 1759 ATCGCCAATGTGAAGGAAAAGATCCAAGTTAAGGAAGGGATCACACCAGTCCAACAGAGG 1818
|| | ||||||||||| |||||| || | || |||||||| |||||| |||||||||
Sbjct 523 ATTGACAATGTGAAGGCAAAGATTCAGGACAAAGAAGGGATTTCACCAGACCAACAGAGA 582
Query 1819 CTAATATTTTTC-GGAAAACAGCTTGAAGATGG-CGTCACTTTAGGGGATTACTGTATTC 1876
|| || ||| | || || |||| ||||||||| || |||||||| ||||||| || |
Sbjct 583 CTCATCTTTG-CAGGCAAGCAGCATGAAGATGGTCG-CACTTTAGCGGATTACAACATCC 640
Query 1877 ATAAAAATTCAACTCT-CTACCTTGTTCTCCGTCT 1910
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Sbjct 641 AGAAAGAGTCAACTCTTC-ACCTTGTTCTCCGTCT 674
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105621946680
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5