BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478305
Length=1494
Score E
Sequences producing significant alignments: (Bits) Value
AT3G09820.1 | Symbols: ADK1, ATADK1 | adenosine kinase 1 | chr3... 2209 0.0
AT5G03300.1 | Symbols: ADK2 | adenosine kinase 2 | chr5:796442-... 1219 0.0
AT4G39930.1 | Symbols: | unknown protein; Has 4 Blast hits to ... 200 3e-50
> AT3G09820.1 | Symbols: ADK1, ATADK1 | adenosine kinase 1 | chr3:3011990-3014944
FORWARD LENGTH=1487
Length=1487
Score = 2209 bits (1196), Expect = 0.0
Identities = 1406/1504 (93%), Gaps = 27/1504 (2%)
Strand=Plus/Plus
Query 1 ATCTTTGGTATACCTACTTTGGTTTTCCACCTATTATAAACACAACAACACTTGTTCACT 60
|||||||||||||||||||||| ||| || |||||||||| | ||||| ||||||
Sbjct 1 ATCTTTGGTATACCTACTTTGG-TTT-CAGAGCTTATAAACAC-A-AACAC---TTCACT 53
Query 61 CACCAAAACACAACACTTGCTCTCTCCA-TTACCAGATCTGAATCTCTTCCCTTT-CTCG 118
|| | ||| ||||||||||| ||||| |||||||||||||| ||||||||||| ||||
Sbjct 54 CA-C---ACAAAACACTTGCTC-CTCCATTTACCAGATCTGAACCTCTTCCCTTTCCTCG 108
Query 119 AAAATCTTTC-ACAGATAATCATCCATGGCTTCCTCTGATTTCGATGGTATCCTTTTGGG 177
|||||| ||| | | || |||||||||||||||||||||||||||||| |||||||||||
Sbjct 109 AAAATCCTTCTA-ACATCATCATCCATGGCTTCCTCTGATTTCGATGGAATCCTTTTGGG 167
Query 178 AATGGGCAACCCACTCCTGGACGTCTCTGCCGTCGTCGACCAAGAGTTTCTCGACAAATA 237
|||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct 168 AATGGGAAACCCACTCCTCGACGTCTCTGCCGTCGTCGACCAACAGTTTCTCGACAAATA 227
Query 238 CGACATCAAATTGAACAATGCGATTCTCGCAGAGGACAAACATTTACCCATGTACGATGA 297
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 228 CGACATCAAATTGAACAATGCGATTCTCGCAGAGGACAAACATTTGCCCATGTACGATGA 287
Query 298 AATGAGCCAGAAGTTCAATGTTGAATACATTGCTGGAGGTGCTACCCAGAACTCAATCAA 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 288 AATGAGCCAGAAGTTCAATGTTGAATACATTGCTGGAGGTGCTACCCAGAACTCAATCAA 347
Query 358 AGTGGCCCAGTGGATGCTTCAAATTCCTGGGGCAACCAGTTACATGGGATCAATTGGAAA 417
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 348 AGTGGCCCAGTGGATGCTTCAAGTTCCTGGGGCAACCAGTTACATGGGATCCATTGGAAA 407
Query 418 GGACAAATACGGAGAGGCAATGAAGAAGGATGCTACAGCAGCTGGTGTCAATGTCCACTA 477
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 408 GGACAAATACGGAGAGGCAATGAAGAAGGATGCTACAGCAGCTGGTGTCTATGTCCACTA 467
Query 478 TTACGAAGATGAGTCAACATCTACCGGAACTTGCGGTGTCTGTGTTCTTGGTGGAGAAAG 537
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 468 TTACGAAGATGAGGCAACACCTACCGGAACTTGCGGTGTCTGTGTTCTTGGTGGAGAAAG 527
Query 538 GTCGCTCATTGCGAATCTTTCTGCTGCTAATTGCTACAAGGTTGAACACTTGAAGAAGCC 597
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 528 ATCGCTCATTGCCAATCTTTCTGCTGCTAATTGCTACAAGGTTGAACACTTGAAGAAGCC 587
Query 598 AGAGAACTGGGCTCTTGTTGAGAAGGCCAAGTTCTACTACATTGCTGGATTCTTCCTCAC 657
|||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||
Sbjct 588 TGAGAACTGGGCTCTGGTTGAGAAGGCCAAGTTTTATTACATTGCTGGATTCTTCCTCAC 647
Query 658 AGTATCACCAGAATCCATTCAGTTGGTACGTGAACATGCCGCTGCAAACAACAAGGTGTT 717
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 648 GGTATCACCAGAATCCATTCAGTTGGTACGTGAACATGCTGCTGCAAACAACAAGGTGTT 707
Query 718 CACGATGAACCTTTCTGCTCCATTCATCTGTGAATTCTTCAAAGATGTTCAGGAGAAGTG 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 708 CACGATGAACCTTTCTGCTCCATTCATCTGTGAATTCTTCAAAGATGTTCAGGAGAAGTG 767
Query 778 CATACCGTACATGGACTATATTTTTGGCAATGAGACCGAGGCAAGAACCTTCTCCAGGGT 837
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 768 CCTGCCGTACATGGACTATATTTTTGGCAATGAGACCGAGGCAAGAACCTTCTCCAGGGT 827
Query 838 TCACGGCTGGGAGACTGATGATGTTGAGCAAATAGCCATCAAGATGTCCCAGTTGCCCAA 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 828 TCACGGCTGGGAGACTGATGATGTTGAGCAAATAGCCATCAAGATGTCCCAGTTACCCAA 887
Query 898 AGCCACTGGGACGTACAAGAGGACTACTGTGATTACACAAGGCGCAGACCCCGTGGTTGT 957
|||| |||| || ||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 888 AGCCTCTGGAACATACAAGAGGACTACTGTGATTACACAAGGCGCAGATCCTGTGGTTGT 947
Query 958 CGCCGAGGATGGAAAAGTGAAGAAGTACCCAGTCATCCCTCTCCCCAAGGAGAAGCTTGT 1017
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 948 CGCTGAGGATGGAAAAGTGAAGAAGTACCCAGTCATCCCTCTCCCCAAAGAGAAGCTTGT 1007
Query 1018 TGACACCAACGGTGCAGGTGATGCGTTTGTAGGAGGGTTTCTTTCGCAGCTGGTGCATGG 1077
|||||||||||||||||||||||| ||||| ||||||||||| || ||||||||||| ||
Sbjct 1008 TGACACCAACGGTGCAGGTGATGCATTTGTGGGAGGGTTTCTGTCCCAGCTGGTGCACGG 1067
Query 1078 AAAGGGGATTGAAGAGTGCGTGAGGGCGGGATGCTACGCTTCAAACGTAGTGATCCAGAG 1137
|||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1068 AAAGGGGATTGAAGAGTGTGTGAGGGCAGGATGCTACGCGTCAAACGTAGTGATCCAGAG 1127
Query 1138 GTCTGGATGCACTTACCCTGAGAAACCAGACTTCAACTAAAGCTAAAAGTCTG-ACAAAT 1196
|||||| |||||||||||||||||||||||||||||||||| ||| ||||| | ||||||
Sbjct 1128 GTCTGGTTGCACTTACCCTGAGAAACCAGACTTCAACTAAATCTAGAAGTC-GCACAAAT 1186
Query 1197 CATCCTTTTAGTTTTATCTCCGAATGAGATTTTGGTGATTATTATTATACGACCCAAATA 1256
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1187 CATCCTTTTAGTTTTATCTCTGAATGAGATTTTGGTGATTATTATTATACGACCCAAATA 1246
Query 1257 AACACTATTGTTGTTTGCTTGTATCAACTTTTGAGGCTTTGAGCTATTATTGAGTGTGT- 1315
||| |||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 1247 AACTCTAT-GTTGTTTTCTTGTATCACCTTTTGAGGCTTTAAGCTATTATTGAGTGTGTG 1305
Query 1316 TTTTGGCTTGATTTTATTATTACCCTTTCATCAGTAATAAATATAATTGCTATGCTAGGC 1375
|||||||||| ||||||| | ||| ||| || | |||||||||| ||| |||| ||||||
Sbjct 1306 TTTTGGCTTGGTTTTATTGT-ACCTTTTTATGATTAATAAATATTATTACTATACTAGGC 1364
Query 1376 CGAGTATGATATAACCAAATGTCAAAATGTTCATAACTTGTTACATCTTCATGGATGTAA 1435
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1365 CGAGTATGATATT-CCAAATGTCAAAATGTTCATAACTTGTTATATCTTCATGGATGTAA 1423
Query 1436 TTTTTCTCCATCTTTGTTTGAACTTGCTTCAT---A--AAGTAATTGAATGATCACAATT 1490
|| | ||| || |||||||||||||||||||| | || |||||||||||||| |||
Sbjct 1424 TTATCCTCTATTTTTGTTTGAACTTGCTTCATTTCATGAAATAATTGAATGATCATTATT 1483
Query 1491 CCCT 1494
||||
Sbjct 1484 CCCT 1487
> AT5G03300.1 | Symbols: ADK2 | adenosine kinase 2 | chr5:796442-799176
FORWARD LENGTH=1348
Length=1348
Score = 1219 bits (660), Expect = 0.0
Identities = 931/1061 (88%), Gaps = 21/1061 (2%)
Strand=Plus/Plus
Query 130 CAGA-TAATCATCCATGGCTTC--C-TCTGATTTCGATGGTATCCTTTTGGGAATGGGCA 185
|||| | ||||| ||||||||| | ||| | | |||||| |||||| | || ||||| |
Sbjct 119 CAGATTCATCAT-CATGGCTTCTTCTTCTAACTACGATGGAATCCTTCTCGGTATGGGTA 177
Query 186 ACCCACTCCTGGACGTCTCTGCCGTCGTCGACCAAGAGTTTCTCGA-CAAATACGACATC 244
|||||||||| || ||||||||||||||||| | || |||||| | |||||||||||||
Sbjct 178 ACCCACTCCTCGATATCTCTGCCGTCGTCGACGACGAATTTCTC-ACCAAATACGACATC 236
Query 245 AAATTGAACAATGCGATTCTCGCAGAGGACAAACATTTACCCATGTACGATGAAATGAGC 304
|| |||||||||||||||||||| || ||||||||||| |||||||| ||||| |||||
Sbjct 237 AAGTTGAACAATGCGATTCTCGCGGAAGACAAACATTTGCCCATGTATGATGAGATGAG- 295
Query 305 CAG-AAGTTCAATGTTGAATACATTGCTGGAGGTGCTACCCAGAACTCAATCAAAGTGGC 363
|| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 296 TAGCAAGTTCAATGTTGAATACATTGCCGGAGGTGCTACTCAGAACTCAATCAAAGTGGC 355
Query 364 CCAGTGGATGCTTCAAATTCCTGGGGCAACCAGTTACATGGGATCAATTGGAAAGGACAA 423
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 356 TCAGTGGATGCTTCAAATTCCTGGGGCAACCAGTTACATGGGATCCATTGGAAAGGACAA 415
Query 424 ATACGGAGAGGCAATGAAGAAGGATGCTACAGCAGCTGGTGTCAATGTCCACTATTACGA 483
||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct 416 ATATGGAGAGGCCATGAAGAAGGATGCTACAGCAGCTGGTGTTAATGTTCACTATTATGA 475
Query 484 AGATGAGTCAACATCTACCGGAACTTGCGGTGTCTGTGTTCTTGGTGGAGAAAGGTCGCT 543
||||||||| || |||| |||||||| |||||||||||| |||||||||||||||| ||
Sbjct 476 AGATGAGTCGGCACCTACTGGAACTTGTGGTGTCTGTGTTGTTGGTGGAGAAAGGTCTCT 535
Query 544 CATTGCGAATCTTTCTGCTGCTAATTGCTACAAGGTTGAACA-CTTGAAGAAGCCAGAGA 602
|||||||||||||| ||||| || |||||||||||||| || ||| |||||||| || |
Sbjct 536 TATTGCGAATCTTTCAGCTGCAAACTGCTACAAGGTTGATCACCTT-AAGAAGCCTGAAA 594
Query 603 ACTGGGCTCTT-GTTGAGAAGGCCAAGTTCTACTACATTGCTGGATTCTTCCTCACAGTA 661
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 ACTGGGC-ATTGGTTGAGAAGGCCAAGTTCTACTACATTGCTGGATTCTTCCTCACAGTA 653
Query 662 TCACCAGAATCCATTCAGTTGGTA-CGTGAACATGCCGCTGCAAACAACAAGGTGTTCAC 720
|| || |||||||||||||||||| | ||| || || |||||||||||||||||||||||
Sbjct 654 TCGCCTGAATCCATTCAGTTGGTATC-TGAGCACGCTGCTGCAAACAACAAGGTGTTCAC 712
Query 721 GATGAACCTTTCTGCTCCATTCATCTGTGAATTCTTCAAAGATGTTCAGGAGAAGTGCAT 780
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |
Sbjct 713 AATGAACCTTTCTGCTCCATTCATCTGTGAATTCTTCAAAGATGTGCAGGAGAAGTTCTT 772
Query 781 ACCGTACATGGACTATATTTTT-GGCAATGAGACCGAGGCAAGAACCTTCTCCAGGGTTC 839
|| |||||||||| | |||| ||||||||||| ||||||||||||||||| |||||||
Sbjct 773 GCCATACATGGACT-TCGTTTTCGGCAATGAGACAGAGGCAAGAACCTTCTCTAGGGTTC 831
Query 840 ACGGCTGGGAGACTGATGATGTTGAGCAAATAGCCATCAAGATGTCCCAG-TTGCCCAAA 898
| |||||||||||||| ||||| || ||||||||||||||||| || ||| || |||||
Sbjct 832 ATGGCTGGGAGACTGAAGATGTCGAACAAATAGCCATCAAGATTTCACAGCTT-CCCAAG 890
Query 899 GCCACTGGGACGTACAAGAGGACTACTGTGATTACACAAGGCGCAGACCCCGTGGTTGTC 958
||||| || || ||||||||||| |||||||||||||| ||||| || || ||||||||
Sbjct 891 GCCACAGGAACATACAAGAGGACCACTGTGATTACACAGGGCGCTGATCCAGTGGTTGTT 950
Query 959 GCCGAGGATGGAAAAGTGAAGAAGTACCCAGTCATCCCTCTCCCCAAGGAGAAGCTTGTT 1018
|| || |||||||| |||||||| || ||||||||||||||||| ||||||||||| |||
Sbjct 951 GCTGAAGATGGAAAGGTGAAGAAATATCCAGTCATCCCTCTCCCAAAGGAGAAGCTGGTT 1010
Query 1019 GACACCAACGGTGCAGGTGATGCGTTTGTAGGAGGGTTTCTTTCGCAGCTGGTGCATG-G 1077
||||||||||||||||||||||| ||||| ||||| ||| | || ||| ||||| | | |
Sbjct 1011 GACACCAACGGTGCAGGTGATGCATTTGTGGGAGGATTTATGTCACAGTTGGTGAAAGAG 1070
Query 1078 AAAGGGGATTGAAGAGTGCGTGAGGGCGGGATGCTACGCTTCAAACGTAGTGATCCAGAG 1137
||| | ||||| || ||||||| ||| |||||||| || || ||||| |||||||| ||
Sbjct 1071 AAATCG-ATTGAGGAATGCGTGAAGGCTGGATGCTATGCGTCGAACGTGGTGATCCAAAG 1129
Query 1138 GTCTGGATGCACTTACCCTGAGAAACCAGACTTCAACTAAA 1178
||||| ||||||||||||||||| || ||||| |||||||
Sbjct 1130 ATCTGGCTGCACTTACCCTGAGAAGCCCGACTTTAACTAAA 1170
> AT4G39930.1 | Symbols: | unknown protein; Has 4 Blast hits to
4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr4:18518343-18518983 REVERSE LENGTH=641
Length=641
Score = 200 bits (108), Expect = 3e-50
Identities = 129/139 (93%), Gaps = 1/139 (1%)
Strand=Plus/Plus
Query 97 TCTGAATCTCTTCCC-TTTCTCGAAAATCTTTCACAGATAATCATCCATGGCTTCCTCTG 155
||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||||||
Sbjct 347 TCTGAATCTCTTCCCTTTTCTCGAAAATCCTTCTCAGATCATCATCCATGGCTTCCTCTG 406
Query 156 ATTTCGATGGTATCCTTTTGGGAATGGGCAACCCACTCCTGGACGTCTCTGCCGTCGTCG 215
|||||||||| ||||| ||||||||| | ||||||||||| | |||||||||||||||||
Sbjct 407 ATTTCGATGGAATCCTCTTGGGAATGAGAAACCCACTCCTCGTCGTCTCTGCCGTCGTCG 466
Query 216 ACCAAGAGTTTCTCGACAA 234
|||||||||||||||||||
Sbjct 467 ACCAAGAGTTTCTCGACAA 485
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73694400060
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5