BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478323
Length=972
Score E
Sequences producing significant alignments: (Bits) Value
AT3G09960.1 | Symbols: | Calcineurin-like metallo-phosphoester... 869 0.0
AT3G09970.1 | Symbols: | Calcineurin-like metallo-phosphoester... 706 0.0
> AT3G09960.1 | Symbols: | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr3:3061952-3063594 FORWARD LENGTH=1113
Length=1113
Score = 869 bits (470), Expect = 0.0
Identities = 591/649 (91%), Gaps = 10/649 (2%)
Strand=Plus/Plus
Query 326 TGGAAGGAGTACTCAAAAAGTGAGGAGAGAGAAGGATGGTATAAAGGTGAAGGGTTCGAG 385
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 354 TGGAAAGAGTACTCAAAAAGTGAGGAGAGAGAAGGATGGTATAAAGGTGAAGGGTTTGAG 413
Query 386 GATATGCATCTCCAAAGTAGAAGATGGGCGGGAAAGATTAGGGATCAGTTCGATTATTCC 445
|||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct 414 AATATGCATCTCCAAAGCAGGAGATGGGCGGGAAAGATTAGGGTTCAGTTCGATTATTCC 473
Query 446 GCATATGGAGTGTTGTATAATGGATCGATATACGATGCTGCCTCGACTTTTGAATCCTAT 505
|||||||||||||||||||||||||| ||||||||||| || || ||||||||||| |||
Sbjct 474 GCATATGGAGTGTTGTATAATGGATCAATATACGATGCGGCGTCTACTTTTGAATCTTAT 533
Query 506 GGCGTTCCTCATGGATCTTCTGATTTGATAAATGCAGTATCTGAGAGTCACAAGAAGTTC 565
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||
Sbjct 534 GGCGTTCCTCATGGATCTTCTGATTTGATAAAGGCAGTACCTGAGAGTCACAAGAAATTC 593
Query 566 TTGACCAATATGGTATGGGTTCATGAAGAGGAAGATGTTTGTATAGAAACAGAGAAAGGG 625
|||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||| ||||
Sbjct 594 TTGACCAATATGGTTTGGGTACATAAAGAGGATGATGTTTGTATAGAAACAGAGGAAGGC 653
Query 626 CTTAAGCATTGTAAGTTGATAGCTGTACATGCTGGTTTAGAGA-AAGGGAATAACGTAGA 684
|||| ||||||||||||||| || |||||||||||| |||||| || | |||||||||||
Sbjct 654 CTTACGCATTGTAAGTTGATTGCCGTACATGCTGGTCTAGAGACAAAG-AATAACGTAGA 712
Query 685 AGAACAGCTTAAACTATTGAGAGCTAAAGACACAAGCATTCCAAGGATACAACATGAACC 744
||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| |
Sbjct 713 AGAACAGCTTAAACTATTGAGAGATAAAGACACAAGCATCCCAAGAATACAAC-----C- 766
Query 745 TCTAACTGGTCGGAAAACCGTTTGGGACATCCCACGGGAACTAGATGATAAACAGACTCT 804
|||||||||||||||||||||||||| ||||||| |||||| ||||||||| ||||| |
Sbjct 767 TCTAACTGGTCGGAAAACCGTTTGGGGGATCCCACAGGAACTGGATGATAAAAAGACTAT 826
Query 805 TATAGTTAGCGGCCACCACGGGAAACTTCACATTGATGGCTTAAGATTGATCATCGATGA 864
| | |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 827 TGTTGTTAGCGGCCACCATGGGAAACTTCACATCGATGGCTTGAGATTGATCATCGATGA 886
Query 865 AGGCGGTGGATACGCCGATAAACCCTTGGCTGCAATTGTTCTTCCTTCTAAGAAGATTAT 924
||| |||||||| |||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 887 AGGTGGTGGATATACCGATACACCTTTGGCTGCAATTGTTCTTCCTTCTAAGAAGATTAT 946
Query 925 CCGCGACACCGATAACTTTTCCAATTGAGTATCT-ACTGTCTTTATATT 972
||||||||||||||| |||||||||| ||||| | | |||||| |||||
Sbjct 947 CCGCGACACCGATAATTTTTCCAATTAAGTATATCA-TGTCTTCATATT 994
Score = 459 bits (248), Expect = 3e-128
Identities = 301/325 (93%), Gaps = 9/325 (3%)
Strand=Plus/Plus
Query 1 CTTAGGATTATTGATTGCATTGCAAGAAACAACACTAATGATGCCCCAAAAACCACGAAC 60
||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 2 CTTAGAATTATTGATTGCATTGCAAGAAACAAGACTAATGATGACCCAAAAACCACGAAC 61
Query 61 TGTGATCTGTGTCGGAGACATCCATGGAAACATATCACTGCTTAATAAACTCTGGCTTAA 120
||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 62 TGTGATCTGCGTCGGAGACATCCATGGAAACATATCAAAGCTCAATAAACTCTGGCTTAA 121
Query 121 TCTTCAATCCGACATCGAACAA-TCAGATTTCAACTCAGCTCTCGTCATCTTCCTCGGCG 179
|||||||||||| ||| || || |||||||||| ||||||||||||||||||||||||||
Sbjct 122 TCTTCAATCCGATATCCAA-AACTCAGATTTCAGCTCAGCTCTCGTCATCTTCCTCGGCG 180
Query 180 ATTACTGCGATCGTGGACCGGAGACTAAAAAAGTCATCGACTTCTTGATCTCTTTGCCGG 239
| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 181 ACTACTGCGATCGTGGACCGGAGACTCGAAAAGTCATCGACTTCTTGATCTCTTTGCCGG 240
Query 240 AGAAACATCCCGAGCAGACTGCAGACCCATGTCTTTCTTGCCGGAAACCACGACTTTGCT 299
||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 241 AGAAACATCCCGA------T-CAGACCCATGTCTTTCTTGCCGGAAACCACGACTTTGCT 293
Query 300 TTTGCTGGGTTCTTGGGTTTGATAC 324
|||||||| |||||||||||| |||
Sbjct 294 TTTGCTGGCTTCTTGGGTTTGTTAC 318
> AT3G09970.1 | Symbols: | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr3:3063774-3065575 FORWARD LENGTH=1207
Length=1207
Score = 706 bits (382), Expect = 0.0
Identities = 552/631 (87%), Gaps = 24/631 (4%)
Strand=Plus/Plus
Query 320 GATACATGGAAGGAGTACTCAAAAAGTGAGGAGAGAGAAGGATGGTATAAAGGTGAAGGG 379
||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 346 GATACGTGGAAGGAGTACTCAAAAAGTGAGGAGACAGAAGGATGGTATACAGGTGAAGGG 405
Query 380 TTCGAGGATATGCATCTCCAAAGTAGAAGATGGGC-GGGAAAGATTAGGGATCA-GTTCG 437
||||| ||||||||||| ||| ||||||||||||| || ||| |||| || | | ||||
Sbjct 406 TTCGAAGATATGCATCTTCAAGGTAGAAGATGGGCTGGTAAA-ATTAAGGCT-ACGTTC- 462
Query 438 ATTATTCCG-CATATGGAGT-GTTGTATAATGGATCGATATACGATGCTGCCTCGACTTT 495
| |||| | | | ||| | | | ||||| |||||||| |||||||||| ||||||||
Sbjct 463 A--ATTCTGTGAAAGGGA-TGGCT-TATAAAGGATCGATTTACGATGCTGGATCGACTTT 518
Query 496 TGAATCCTATGGCGTTCCTCATGGATCTTCTGATTTGATAAATGCAGTATCTGAGAGTCA 555
|||||| ||||||||||| |||||||||||||||||||| || |||||| ||||||||||
Sbjct 519 TGAATCTTATGGCGTTCCACATGGATCTTCTGATTTGATGAAGGCAGTACCTGAGAGTCA 578
Query 556 CAAGAAGTTCTTGACCAATATGGTATGGGTTCATGAAGAGGAAGATGTTTGTATAGAAAC 615
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 579 CAAGAAGTTCTTGACCAATATGGTATGGGTTCATGAAGAGGACGATGTTTGTATAGAAAC 638
Query 616 AGAGAAAGGGCTTAAGCATTGTAAGTTGATAGCTGTACATGCTGGTTTAGAGAAAGGGAA 675
|||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 639 AGAGGAAGGGCTTAAGCATTGTAAGTTGATCGCCGTACATGCTGGTTTAGAGAAAGGGAA 698
Query 676 TAACGTAGAAGAACAGCTTAAACTATTGAGAGCTAAAGACACAAGCAT-TCCAAGGATAC 734
||||||||||||||| || || || ||||||||||||||||| ||||| || || ||||
Sbjct 699 TAACGTAGAAGAACAACTGAAGCTTTTGAGAGCTAAAGACACTAGCATCTCAAAA-ATAC 757
Query 735 AACATGAACCTCTAACTGGTCGGAAAACCGTTTGGGACATCCCACGGGAACTAGATGATA 794
||||| | | || |||| |||||| ||||||||||||||||| ||| || |||||||
Sbjct 758 AACAT---C-T--AAGTGGTAGGAAAAACGTTTGGGACATCCCACAGGAGCTGGATGATA 811
Query 795 AACAGACTCTTATAGTTAGCGGCCACCACGGGAAACTTCACATTGATGGCT-TAAGATTG 853
|||| ||| || | |||||||| ||||| || ||||||||||| ||||| | | ||||||
Sbjct 812 AACATACTGTTGTTGTTAGCGGGCACCATGGAAAACTTCACATCGATGG-TATGAGATTG 870
Query 854 ATCATCGATGAAGGCGGTGGATACGCCG-ATAAACCCTTGGCTGCAATTGTTCTTCCTTC 912
|||||||||||||||||||||| | ||| ||||||| |||| |||||||||||||||||
Sbjct 871 ATCATCGATGAAGGCGGTGGATTC-CCGGATAAACCAGTGGCAGCAATTGTTCTTCCTTC 929
Query 913 TAAGAAGATTATCCGCGACACCGATAACTTT 943
|||||||||||||| ||||||||||| |||
Sbjct 930 CAAGAAGATTATCCGTGACACCGATAA-TTT 959
Score = 300 bits (162), Expect = 2e-80
Identities = 239/275 (87%), Gaps = 9/275 (3%)
Strand=Plus/Plus
Query 47 CAAAAACCACGAACTGTGATCTGTGTCGGAGACATCCATGGAAACATATCACTGCTTAAT 106
|||||||||||||| |||||||| |||||||||||||||||| |||||||| ||| |||
Sbjct 46 CAAAAACCACGAACGGTGATCTGCGTCGGAGACATCCATGGATACATATCAAAGCTCAAT 105
Query 107 AAACTCTGGCTTAATCTTCAATCCGACATCGAACAATCAGATTTCAACTCAGCTCTCGTC 166
|| |||||||||||||| ||||| | |||||| | ||||||||||| |||||||||||||
Sbjct 106 AACCTCTGGCTTAATCTCCAATCTGCCATCGACCCATCAGATTTCAGCTCAGCTCTCGTC 165
Query 167 ATCTTCCTCGGCGATTACTGCGATCGTGGACCGGAGACTAAAAAAGTCATCGACTTCTTG 226
|| ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 166 ATATTCCTTGGCGATTACTGCGATCGTGGACCGGAGACTCGAAAAGTCATCGATTTCTTA 225
Query 227 ATCTCTTTGCCGGAGAAACATCCCGAGCAGACTGCAGACCCATGTCTTTCTTGCCGGAAA 286
|||||| ||||||||||||||||||| || ||| || ||||||||| ||||| ||
Sbjct 226 ATCTCTCTGCCGGAGAAACATCCCGATCAAACT-CA------TGTCTTTCTCGCCGGGAA 278
Query 287 CCACGACTTTGCTTT-TGCTGGGTTCTTGGGTTTG 320
||| |||||||| || | |||||||||| ||||||
Sbjct 279 CCATGACTTTGCCTTCT-CTGGGTTCTTAGGTTTG 312
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47571737209
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5