BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478324
Length=1212
Score E
Sequences producing significant alignments: (Bits) Value
AT3G09970.1 | Symbols: | Calcineurin-like metallo-phosphoester... 1679 0.0
AT3G09960.1 | Symbols: | Calcineurin-like metallo-phosphoester... 1016 0.0
> AT3G09970.1 | Symbols: | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr3:3063774-3065575 FORWARD LENGTH=1207
Length=1207
Score = 1679 bits (909), Expect = 0.0
Identities = 1129/1228 (92%), Gaps = 44/1228 (4%)
Strand=Plus/Plus
Query 1 AAGTACATTATCATCATTTCAAGAAAC----AGAGACTAATGGCGCAAAAACCACGAACG 56
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1 AAGTACATTATCATCATTTCAAGAAACAGAGAGAGACTAATGGCGCAAAAACCACGAACG 60
Query 57 GTGCTCTGCGTCGGAGACATCCATGGATATATATCAAAGCTCAATAACCTCTGGCTTAAT 116
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 GTGATCTGCGTCGGAGACATCCATGGATACATATCAAAGCTCAATAACCTCTGGCTTAAT 120
Query 117 CTCCAATCCGCCATCGACCCATCAGAATTCAGCTCAGCTCTCGTCATCTTCCTCGGCGAT 176
|||||||| ||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 121 CTCCAATCTGCCATCGACCCATCAGATTTCAGCTCAGCTCTCGTCATATTCCTTGGCGAT 180
Query 177 TACTGCGATCGGGGACCGGAGAC-CGGAAAAGTCATTGATTTCTTAATCTCTCTACCGGA 235
||||||||||| ||||||||||| | |||||||||| ||||||||||||||||| |||||
Sbjct 181 TACTGCGATCGTGGACCGGAGACTC-GAAAAGTCATCGATTTCTTAATCTCTCTGCCGGA 239
Query 236 GAAACATCCCGATCAAACTCACGTCTTTCTCGCCGGGAACCACGACTTCGCCTTCTCTGG 295
||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||
Sbjct 240 GAAACATCCCGATCAAACTCATGTCTTTCTCGCCGGGAACCATGACTTTGCCTTCTCTGG 299
Query 296 GTTCTTGGGTTTGTTGCCCCGTCCTTCAGATGGGTCTGATTTGAAGGATACGTGGAAGGA 355
|||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 300 GTTCTTAGGTTTGTTGCCTCGTCCTTCAGATGGATCTGATTTGAAGGATACGTGGAAGGA 359
Query 356 GTAC-GAGGGTAGCGAGGAGAGAGAAGGATGGTATAGAGGTGAAGGGTTTGAGGATATGC 414
|||| | || ||||||| |||||||||||||| |||||||||||| || |||||||
Sbjct 360 GTACTCA-AAAAGTGAGGAGACAGAAGGATGGTATACAGGTGAAGGGTTCGAAGATATGC 418
Query 415 ATCTTCAAGGTAGGAGATGGGCTGGTAAAATTAAGGCTACGTTTAATTCTGTGAAAGGGA 474
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 419 ATCTTCAAGGTAGAAGATGGGCTGGTAAAATTAAGGCTACGTTCAATTCTGTGAAAGGGA 478
Query 475 TGGCTTATAAGGGTTCGATTTACGATGCTGGATCGACTTTTGAATCTTATGGTGTTCCTC 534
|||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 479 TGGCTTATAAAGGATCGATTTACGATGCTGGATCGACTTTTGAATCTTATGGCGTTCCAC 538
Query 535 ATGGATCTTCTGATTTGATGAAGGCAGTACCTGAGAGTCACAAGAAGTTCTTGACCAATA 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 ATGGATCTTCTGATTTGATGAAGGCAGTACCTGAGAGTCACAAGAAGTTCTTGACCAATA 598
Query 595 TGGTATGGGTTCATGAAGAGAACGATGTTTGTATAGAAACAGAGGAAGGGCTTAGGCATT 654
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 599 TGGTATGGGTTCATGAAGAGGACGATGTTTGTATAGAAACAGAGGAAGGGCTTAAGCATT 658
Query 655 GTAAGTTGATCGCCGTACATGCTGGTTTAGAGAAAGGGAATAACGTAGAAGAACAACTGA 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 GTAAGTTGATCGCCGTACATGCTGGTTTAGAGAAAGGGAATAACGTAGAAGAACAACTGA 718
Query 715 AGCTTTTGAGAGCTAAAGACACTAGCATCTCAAAAATACAACATCTAAGTGGTCGGAAAA 774
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 719 AGCTTTTGAGAGCTAAAGACACTAGCATCTCAAAAATACAACATCTAAGTGGTAGGAAAA 778
Query 775 ACGTTTGGGACATCCCACAGGAGCTGGATGATAAACATACTGTCGTTGTAAGTGGGCACC 834
||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct 779 ACGTTTGGGACATCCCACAGGAGCTGGATGATAAACATACTGTTGTTGTTAGCGGGCACC 838
Query 835 ATGGAAAACTTCACATCGATGGCATGAGATTGATAATCGATGAAGGCGGTGGATTCCCGG 894
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 839 ATGGAAAACTTCACATCGATGGTATGAGATTGATCATCGATGAAGGCGGTGGATTCCCGG 898
Query 895 ATAAACCTGTGGCTGCAATTGTTCTTCCTTCCAAGAAGATTATCCGCGACACCGATAATT 954
||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 899 ATAAACCAGTGGCAGCAATTGTTCTTCCTTCCAAGAAGATTATCCGTGACACCGATAATT 958
Query 955 TGTCTAGTTAAGTTTTTCTCATCTATCTATTGTACCAAAGTAAATTTTGATTTCAAAATA 1014
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 959 TGTCTAGTTAAGTTTTTCTCATCTA-CTATTGTACCAAAGTCAATTTTGATTTCAAAATA 1017
Query 1015 ATTGTAGTAAGGCT-AGCACTAAATTTCAGCTATTTAATTTACTGTTCTTACAAAGAAAA 1073
| |||||||||| | ||||||||||| | | | |||||| |||||||||||||||
Sbjct 1018 AATGTAGTAAGGTTTAGCACTAAATT---G--A---A-TTTACTTTTCTTACAAAGAAAA 1068
Query 1074 TAAATGAGCCTCTGAAAGCCTCGCAAATCCAATAAGCCAAGATTTATGTA-GCGGTCTAG 1132
|||||| ||||||||||| | | || ||| |||||| || | |||||||||
Sbjct 1069 TAAATGGGCCTCTGAAAGA---G----T--AA---GCCCAGATTT-TGGAAGCGGTCTAG 1115
Query 1133 TTATATAATA-AGGCTCGAAAT-TTATTGGGTTGTTCaaaaaaagcccaaa-aaa-C-TA 1187
| | |||| || |||||||| || ||||||||||||||||| ||||||| ||| | |
Sbjct 1116 TGGTGTAATGTAG-CTCGAAATCTT-TTGGGTTGTTCAAAAAA-GCCCAAACAAAACATG 1172
Query 1188 C-A-A-TCCATTTTTAATCAAAATTATT 1212
| | | ||||||||||||| ||||||||
Sbjct 1173 CTATAATCCATTTTTAATCGAAATTATT 1200
> AT3G09960.1 | Symbols: | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr3:3061952-3063594 FORWARD LENGTH=1113
Length=1113
Score = 1016 bits (550), Expect = 0.0
Identities = 836/971 (86%), Gaps = 31/971 (3%)
Strand=Plus/Plus
Query 15 CATTTCAAGAAACAGAGACTAATG--G-CGCAAAAACCACGAACGGTGCTCTGCGTCGGA 71
|||| ||||||||| ||||||||| | | |||||||||||||| ||| |||||||||||
Sbjct 19 CATTGCAAGAAACA-AGACTAATGATGACCCAAAAACCACGAACTGTGATCTGCGTCGGA 77
Query 72 GACATCCATGGATATATATCAAAGCTCAATAACCTCTGGCTTAATCTCCAATCCGCCAT- 130
|||||||||||| | ||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct 78 GACATCCATGGAAACATATCAAAGCTCAATAAACTCTGGCTTAATCTTCAATCCGATATC 137
Query 131 CGACCCATCAGAATTCAGCTCAGCTCTCGTCATCTTCCTCGGCGATTACTGCGATCGGGG 190
| | | ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 138 CAAAAC-TCAGATTTCAGCTCAGCTCTCGTCATCTTCCTCGGCGACTACTGCGATCGTGG 196
Query 191 ACCGGAGAC-CGGAAAAGTCATTGATTTCTTAATCTCTCTACCGGAGAAACATCCCGATC 249
||||||||| | |||||||||| || ||||| |||||| | |||||||||||||||||||
Sbjct 197 ACCGGAGACTC-GAAAAGTCATCGACTTCTTGATCTCTTTGCCGGAGAAACATCCCGATC 255
Query 250 AAACTCACGTCTTTCTCGCCGGGAACCACGACTTCGCCTTCT-CTGGGTTCTTGGGTTTG 308
| || || |||||||| ||||| ||||||||||| | ||| | |||| ||||||||||||
Sbjct 256 AGACCCATGTCTTTCTTGCCGGAAACCACGACTTTG-CTTTTGCTGGCTTCTTGGGTTTG 314
Query 309 TTGCCCCGTCCTTCAGATGGGTCTGA-TTTGAAGGATACGTGGAAGGAGTAC-GAGGGTA 366
|| || || ||||||||||||||||| ||| ||||| |||||||| |||||| | |
Sbjct 315 TTACCTCGCCCTTCAGATGGGTCTGAGTTT-AAGGAAACGTGGAAAGAGTACTCA-AAAA 372
Query 367 GCGAGGAGAGAGAAGGATGGTATAGAGGTGAAGGGTTTGAGGATATGCATCTTCAAGGTA 426
| |||||||||||||||||||||| |||||||||||||||| |||||||||| ||| | |
Sbjct 373 GTGAGGAGAGAGAAGGATGGTATAAAGGTGAAGGGTTTGAGAATATGCATCTCCAAAGCA 432
Query 427 GGAGATGGGCTGGTAAA-ATTAAGGCTAC-GTT---TAATTCTGTGAAAGGGATG-GCT- 479
|||||||||| || ||| ||| ||| | | ||| | |||| | | | ||| | | |
Sbjct 433 GGAGATGGGC-GGGAAAGATT-AGGGTTCAGTTCGATTATTCCG-CATATGGA-GTGTTG 488
Query 480 TATAAGGGTTCGATTTACGATGCTGG-ATCGACTTTTGAATCTTATGGTGTTCCTCATGG 538
||||| || || || |||||||| || || ||||||||||||||||| |||||||||||
Sbjct 489 TATAATGGATCAATATACGATGC-GGCGTCTACTTTTGAATCTTATGGCGTTCCTCATGG 547
Query 539 ATCTTCTGATTTGATGAAGGCAGTACCTGAGAGTCACAAGAAGTTCTTGACCAATATGGT 598
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 548 ATCTTCTGATTTGATAAAGGCAGTACCTGAGAGTCACAAGAAATTCTTGACCAATATGGT 607
Query 599 ATGGGTTCATGAAGAGAACGATGTTTGTATAGAAACAGAGGAAGGGCTTAGGCATTGTAA 658
||||| ||| ||||| | |||||||||||||||||||||||||| |||| |||||||||
Sbjct 608 TTGGGTACATAAAGAGGATGATGTTTGTATAGAAACAGAGGAAGGCCTTACGCATTGTAA 667
Query 659 GTTGATCGCCGTACATGCTGGTTTAGAGA-AAGGGAATAACGTAGAAGAACAACTGAAGC 717
|||||| ||||||||||||||| |||||| || |||||||||||||||||| || || |
Sbjct 668 GTTGATTGCCGTACATGCTGGTCTAGAGACAA-AGAATAACGTAGAAGAACAGCTTAAAC 726
Query 718 TTTTGAGAGCTAAAGACACTAGCATCTCAAAAATACAACATCTAAGTGGTCGGAAAAACG 777
| ||||||| ||||||||| |||||| ||| |||||||| ||||| ||||||||||| ||
Sbjct 727 TATTGAGAGATAAAGACACAAGCATCCCAAGAATACAACCTCTAACTGGTCGGAAAACCG 786
Query 778 TTTGGGACATCCCACAGGAGCTGGATGATAAACATACTGTCGTTGTAAGTGGGCACCATG 837
|||||| ||||||||||| |||||||||||| | ||| | ||||| || || |||||||
Sbjct 787 TTTGGGGGATCCCACAGGAACTGGATGATAAAAAGACTATTGTTGTTAGCGGCCACCATG 846
Query 838 GAAAACTTCACATCGATGGCATGAGATTGATAATCGATGAAGGCGGTGGAT-TCCCGGAT 896
| |||||||||||||||||| |||||||||| ||||||||||| ||||||| | || |||
Sbjct 847 GGAAACTTCACATCGATGGCTTGAGATTGATCATCGATGAAGGTGGTGGATATACC-GAT 905
Query 897 AAACCTGTGGCTGCAATTGTTCTTCCTTCCAAGAAGATTATCCGCGACACCGATAATTTG 956
| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 906 ACACCTTTGGCTGCAATTGTTCTTCCTTCTAAGAAGATTATCCGCGACACCGATAATTTT 965
Query 957 TCTAGTTAAGT 967
|| | ||||||
Sbjct 966 TCCAATTAAGT 976
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59537846370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5