BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478362 Length=1829 Score E Sequences producing significant alignments: (Bits) Value AT3G10320.1 | Symbols: | Glycosyltransferase family 61 protein... 2536 0.0 > AT3G10320.1 | Symbols: | Glycosyltransferase family 61 protein | chr3:3195314-3197346 REVERSE LENGTH=1847 Length=1847 Score = 2536 bits (1373), Expect = 0.0 Identities = 1661/1792 (93%), Gaps = 51/1792 (3%) Strand=Plus/Plus Query 61 tctctctatctctcgtctactctct--ct-cctctc-CCCTTACGTATCCAAGGAGATAG 116 |||||||| ||||| | | |||||| || | |||| ||||||||| ||||||||||||| Sbjct 84 TCTCTCTA-CTCTC-TTTCCTCTCTAGCTACTTCTCTCCCTTACGTCTCCAAGGAGATAG 141 Query 117 ATACACAAATTCTGTTCACAAAGAAGAAAAGTTTACTATTTCCTCTGCATACGTCTCGTC 176 || ||||||||||||||||||| ||||| | | |||||||||||| |||| Sbjct 142 ATTGACAAATTCTGTTCACAAAG--GAAAA----A--AGTTCCTCTGCATA-----CGTC 188 Query 177 TCTCTTTCTCTGTGTTCTTCACCTATATGACTTGAATAAGAAGTAAAGGATGAGGCAGAA 236 |||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct 189 TCTC--TCTCTATGTTCTTCATTTATATGACTTGAATAACAAGTAAAGGATGAGGCAGAA 246 Query 237 TCTGAAAAAAGTAGCACAGATCAAAGTAGACGAATCTCCA-AAGCTATTTCCTTATGTCT 295 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 247 TCTGAAAAAAGTAGCACAGATCAAAGTAGACGAATCT-AAGAAGCTATTTCCTTATGTCT 305 Query 296 TCCGGTTTAAAAATTCTTGTGGGAATTGCGCAAAGAGATCGAAGCCTAAACTTATTTAtc 355 ||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||| |||| Sbjct 306 TCCGGGTTAAAACTTCTTGTGGGAATTGCGCTAAGAGATCGAAGCCTAAGCTTATCTATC 365 Query 356 ttcttctcttctctcttATCTCAAGTTGCTTTGTCTTTGCTCCTGATCTCCTCTATTTCC 415 ||||| |||||||||||||||||||||||||||||||||||||| | ||||||| ||||| Sbjct 366 TTCTTATCTTCTCTCTTATCTCAAGTTGCTTTGTCTTTGCTCCTCAGCTCCTCTGTTTCC 425 Query 416 CTTATCCATCTGCTCTGTTTCTCATCGATTCTTCAATTAAAGAGATTGAAAATCGGGTTT 475 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 426 CTTACCCCTCTGCTCTGTTTCTCATCGATTCTTCAATTAAAGAGATTGAAAATCGGGTTT 485 Query 476 CCGAAAGCCATATAGAATCACCTAAGACGTCACAAAATGAAGAGAGCATATCTTGTGACA 535 |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 486 CCGAAAGCAATATAGAATCACCTAAGACGTCACAAAAAGAAGAGAGCATATCTTGTGACA 545 Query 536 GAACCGGGTATCGTTCAGACATCTGTTTCATGAAAGGAGATATCAGAACACACTCTCCTT 595 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 546 GAACCGGCTATCGTTCAGACATCTGTTTCATGAAAGGCGATATCAGAACACACTCTCCTT 605 Query 596 CTTCCTCTAT-TATTCTCTACACCTCGAATGATCT---CACCGATAATGTCTTGCCAGAA 651 | ||||| || | |||||||||||||||||||||| ||||||| | ||||||| |||| Sbjct 606 CCTCCTCCATCT-TTCTCTACACCTCGAATGATCTCACCACCGATCAGGTCTTGCAAGAA 664 Query 652 AAAATCAAACCATACACCAGAAAATGGGAAACAAGTATAATGGAAACCATCCATGAGCTG 711 |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 665 AAAATCAAACCATACACCAGAAAATGGGAAACTAGTATAATGGAAACCATCCCTGAGCTC 724 Query 712 AAACTTGTGACAAAAGATATGAAGCGTTTTGGTGACAGGTGTAAATGTGAAGTGATCCAT 771 ||||||||||||||||||||||||| |||||| |||| | ||||||| |||||||||||| Sbjct 725 AAACTTGTGACAAAAGATATGAAGCTTTTTGGCGACAAGCGTAAATGCGAAGTGATCCAT 784 Query 772 GAAGTACCCGCTGTGCTATTCTCTACCGGAGGGTATACCGGAAACTTGTATCATGAGTTC 831 |||||||| || |||||||||||||||||||| |||||||||||| | |||||||||||| Sbjct 785 GAAGTACCGGCCGTGCTATTCTCTACCGGAGGATATACCGGAAACCTCTATCATGAGTTC 844 Query 832 AACGACGGGCTTATTCCTCTGTATATAACATCTAAACGTTTCAACAAAAAGGTTGTCTTT 891 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 845 AACGACGGGCTTATTCCTTTGTATATAACATCTAAACGTTTCAACAAAAAGGTTGTCTTT 904 Query 892 GTGATTGCTGAGTATCACAAGTGGTGGGAGATGAAGTATGGAGATGTTCTCTCTCAGCTC 951 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 905 GTGATTGCTGAGTATCACAAGTGGTGGGAGATGAAGTATGGAGATGTTCTCTCTCAGCTC 964 Query 952 TCTGATTA-TCCTCTTATTGATTTCAGCAAAGACAAGAGAACTCACTGTTTCAAGGAAGC 1010 |||||||| || |||||| || |||| ||||||||||||||||||||| ||||||||||| Sbjct 965 TCTGATTACTC-TCTTATCGACTTCAACAAAGACAAGAGAACTCACTGCTTCAAGGAAGC 1023 Query 1011 CATTGTTGGTCTTAGAATCCATGGTGAGTTAACCGTTGATCCTTCTCAGATGCAAGATGG 1070 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1024 TATTGTTGGTCTTAGAATCCATGGTGAGTTAACCGTCGATCCTTCTCAGATGCAAGATGA 1083 Query 1071 TAGAACAACCATCAATGAGTTCAGAAATGTACTTGATCGAGCTTATGGACCCCGAATCAA 1130 | |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 1084 TGGAACAACCATCAATGAGTTCAGAAATGTACTTGATCGAGCTTATAGACCACGAATCAA 1143 Query 1131 CAGACTGGACAGGCTAGAGGAGCAACGGTTCCACGCAAGAGTAGCAAAGAGAAGAAAGGC 1190 ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| Sbjct 1144 CAGACTGGACAGGCTAGAGGAGCAACGATTCCACGCAAGACTAGCACAGAGAAGAAAGGC 1203 Query 1191 TCAGAGGCCAAAACTAGCGTTGTTTTCAAGAACCGGGTCTCGAGGGATAACAAACGAGGA 1250 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1204 TAAGAGGCCAAAACTAGCGTTGTTTTCAAGAACCGGGTCTCGAGGGATAACAAACGAGGA 1263 Query 1251 TCTGATGGTGCAATTGGCTCAAAGGATCGGGTTTGA-AGTTGAGGTTTTGAGACCTGACA 1309 ||||||||| || ||||||| |||||||||||||| | | ||||||||||||||||||| Sbjct 1264 CCTGATGGTGAAAATGGCTCAGAGGATCGGGTTTGACA-TCGAGGTTTTGAGACCTGACA 1322 Query 1310 GAACAACGGAACTGGCAAAGATTTACAGAGTGCTTAA-CTCAAGCAAAGTCATGGTTGGG 1368 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 1323 GAACAACGGAACTGGCAAAGATTTACAGAGTG-TTAAACTCAAGCAAAGTCATGGTTGGG 1381 Query 1369 GTACATGGAGCAGCCATGACCCATTTTCTGTTCATGCAACCTGGAAGTATCTTTATTCAG 1428 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1382 GTACATGGAGCAGCCATGACCCATTTTCTGTTCATGAAACCTGGAAGTATCTTTATTCAG 1441 Query 1429 ATCATTCCATTGGGGACAGATTGGGCAGCAGAGACATATTATGGAGAACCGGCAAAGAAG 1488 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1442 ATCATTCCACTGGGAACAGATTGGGCAGCAGAGACATATTATGGAGAACCGGCAAAGAAG 1501 Query 1489 CTCGGTCTAGACTACATTGGTTATAAGATTCTTCCAAGAGAGAGCTCATTGTATGAAAAA 1548 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1502 CTCGGTCTAGACTACAATGGTTATAAGATTCTTCCAAGAGAGAGCTCATTGTATGAAAAA 1561 Query 1549 TATGATAAAGATGATCCAATTCTAAGAGATCCAAACAGCATCACTAAGAAAGGATGGCAA 1608 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1562 TATGATAAAGATGATCCAATTCTAAAAGATCCAAACAGCATCACTAAGAAAGGATGGCAA 1621 Query 1609 TTCACAAAGGGGATATACCTGAACGGCCAGAAAGTGAGGTTAGATCTCCATAGATTCAAG 1668 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1622 TTCACAAAGGGGATATACCTGAACGACCAGAAAGTGAGGTTAGATCTCCATAGATTCAAG 1681 Query 1669 AAGGTTTTGGTTGATGCGTATGCAAAATCGATTAGCTGACCTGAAATGAGTTCTGAAAGT 1728 ||| ||||| ||||||||||||||||||||||||| |||||||||||||||| ||| ||| Sbjct 1682 AAGCTTTTGATTGATGCGTATGCAAAATCGATTAGGTGACCTGAAATGAGTTTTGAGAGT 1741 Query 1729 TTTATTTTGTTGTTGCTGTATAGTCTGCACAAACTACAGA-------G--TTCTTT--GT 1777 | | |||| |||||||||||||||||||| |||||||||| | |||||| || Sbjct 1742 TCT-TTTTATTGTTGCTGTATAGTCTGCATAAACTACAGAAATTACAGAGTTCTTTTTGT 1800 Query 1778 AAAGATTTAAATGAAACCGTAACATAAATGAATTCAATGTTGCAGAGACACT 1829 |||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 1801 AAAGATTTAAATGAAACC--A---TAAATGAATTCAATGTTTCAGAGACACT 1847 Score = 89.8 bits (48), Expect = 9e-17 Identities = 62/68 (91%), Gaps = 4/68 (6%) Strand=Plus/Plus Query 1 CTCTCTAAATAAATACTCTGATTTCAAAGC-ACAACGCCTTACAACAACACCCAGAAAAC 59 |||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||| Sbjct 1 CTCTCTAAATAAATACTCTGATTTCAAAGCTAAAAC---TTACAACAACACCCACAAAAC 57 Query 60 Ttctctct 67 |||||||| Sbjct 58 TTCTCTCT 65 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 90511582635 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5