BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478378 Length=531 Score E Sequences producing significant alignments: (Bits) Value AT3G10460.1 | Symbols: | Plant self-incompatibility protein S1... 525 2e-148 > AT3G10460.1 | Symbols: | Plant self-incompatibility protein S1 family | chr3:3255800-3256439 FORWARD LENGTH=640 Length=640 Score = 525 bits (284), Expect = 2e-148 Identities = 362/400 (91%), Gaps = 4/400 (1%) Strand=Plus/Plus Query 1 ATGAAGTTAGGTGTGACAATATTTCTGATTGTTGTATGCTTATACACCGAACATGTGATA 60 ||||||||| ||||||| ||||||||||| |||||||| |||||||||||| |||||||| Sbjct 3 ATGAAGTTACGTGTGACGATATTTCTGATGGTTGTATGTTTATACACCGAAAATGTGATA 62 Query 61 GGAGGATCGGTGTTTATCTATAACAACCTGCACCACGGACACTATTTACAAGTGCATTGC 120 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||| Sbjct 63 GGAGGATCGGTGTTTATCTATAACAACCTGCCCCACGGACACTATTTACAAGTGAAATGC 122 Query 121 AAATCCGGAGACAGCAATCTCGGTGACCACGTGAGACGCCCCGGTGCGG-CGTACAGTTA 179 ||||| ||||||| |||||| ||| |||||||||||| |||||| ||| |||| ||| Sbjct 123 AAATCTGGAGACACCAATCTTGGTTTCCACGTGAGACGGCCCGGT-CGGTTTTACAATTA 181 Query 180 TTCTTTCACTGATCATATATTTGGAAAAACGCTTTATTGGTGTCATCTATGGAAAGGTAA 239 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 182 CGCTTTCACTGATCATATACTTGGAAAAACGCTTTATTGGTGTCATCTATGGAAAGGTAA 241 Query 240 GGACTGGGAGAATCATGTGGCGATCGTTGCCTACGAAAGTAAGCAGTTGCCTCATCGCGA 299 |||||||| ||||||||| |||||||||||||||||||| | | |||||||||||||| Sbjct 242 AAACTGGGAGGATCATGTGGTGATCGTTGCCTACGAAAGTAGGGATTTGCCTCATCGCGA 301 Query 300 CAATTGGGTTAGATGGTCGGTCAGGGAAAATGGCATCTATCAAAATGTGAACGGTGAGGA 359 ||||||||| || ||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct 302 CAATTGGGTGAGGTGGTCGGCCAGGGAATCTGGCATCTATCAAAATGTTAACGGTGAGGA 361 Query 360 GA-ATTACCATTTCAGGTATAATTGGGATGGTCACGTTTA 398 || ||| || |||||||||||||||||||||||||||||| Sbjct 362 GAGATT-CCGTTTCAGGTATAATTGGGATGGTCACGTTTA 400 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25418478382 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5