BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478382
Length=1778
Score E
Sequences producing significant alignments: (Bits) Value
AT3G10490.2 | Symbols: ANAC052, NAC052 | NAC domain containing ... 2737 0.0
AT3G10480.3 | Symbols: ANAC050, NAC050 | NAC domain containing ... 872 0.0
> AT3G10490.2 | Symbols: ANAC052, NAC052 | NAC domain containing
protein 52 | chr3:3267835-3270883 FORWARD LENGTH=1793
Length=1793
Score = 2737 bits (1482), Expect = 0.0
Identities = 1699/1800 (94%), Gaps = 30/1800 (2%)
Strand=Plus/Plus
Query 1 AAATTGGAATCGCAATCCAAAATAC---TTTG-T--T-ACTACTA----GCC-TTCTGGG 48
||||||| ||||||||||||||||| |||| | | |||||| ||| |||||||
Sbjct 1 AAATTGGTATCGCAATCCAAAATACTTTTTTGTTGCTCTCTACTAGCCTGCCTTTCTGGG 60
Query 49 AACGCGAAAAGAAAGAC-AAA-TTTCTTGCAATTGAAGGTGAGATTTGGGGATAGGGAAA 106
||||||||||||||||| ||| ||||||||||||||||||||| ||||| || |||||||
Sbjct 61 AACGCGAAAAGAAAGACAAAATTTTCTTGCAATTGAAGGTGAGGTTTGGTGAAAGGGAAA 120
Query 107 TTGAGGAAACCCTAGAACAAGTACGGTCTTTACTTTGCTATAATGGGTCGCGAATCTCTG 166
||||| ||||||||||||||||||||||| || |||||| ||||||||||||||||| ||
Sbjct 121 TTGAGAAAACCCTAGAACAAGTACGGTCTCTATTTTGCTTTAATGGGTCGCGAATCTGTG 180
Query 167 GCTGTTGTGACTGCGCCGCCCTCGGCGACTGCTCCGGGTACTGCTACTGCGGCTACCTCG 226
||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||||||
Sbjct 181 GCTGTTGTGACTGCGCCGCCCTCGGCGACTGCTCCGGGTACTGCTTCGGTGGCGACCTCG 240
Query 227 CTTGCTCCTGGCTTCCGATTTCATCCGACTGATGAGGAACTCGTGAGCTATTACTTGAAG 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CTTGCTCCTGGCTTCCGATTTCATCCGACTGATGAGGAACTCGTGAGCTATTACTTGAAG 300
Query 287 AGGAAGGTTCTGGGCAAACCTGTACGCTTCGATGCGATTGGAGAGGTCGATATCTATAAG 346
||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||
Sbjct 301 AGGAAGGTTCTGGGCCAACCTGTACGCTTCGATGCGATTGGAGAGGTCGATATATACAAG 360
Query 347 CATGAGCCCTGGGATTTAGCAGTGTTTTCGAGGTTGAAGACAAGGGACCAAGAATGGTAC 406
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 361 CATGAGCCCTGGGATTTAGCAGTGTTTTCGAGATTGAAGACAAGGGACCAAGAATGGTAC 420
Query 407 TTCTACAGCGCATTAGATAAGAAGTATGGAAACGGCGCTAGGATGAACCGAGCAACTAAC 466
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 421 TTCTACAGTGCATTAGATAAGAAGTATGGAAACGGTGCTAGGATGAACCGAGCAACTAAC 480
Query 467 AGAGGGTACTGGAAAGCAACTGGAAAAGACAGAGAAATCCGCCGTGACATTCAGCTGCTC 526
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct 481 AGAGGGTACTGGAAAGCTACTGGAAAAGACAGAGAAATCCGCCGTGACATTCTGCTTCTC 540
Query 527 GGTATGAAAAAGACGCTTGTTTTCCACAGCGGGCGTGCCCCAGACGGGCTTCGGACTAAT 586
|||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 541 GGTATGAAAAAGACACTTGTTTTCCACAGTGGGCGTGCACCAGACGGGCTTCGGACTAAT 600
Query 587 TGGGTCATGCACGAGTATCGCCTTGTGGAATATGAAACCGAGAAAAACGGAAACCTGGTG 646
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TGGGTTATGCATGAGTATCGCCTTGTGGAATATGAAACCGAGAAAAACGGAAACCTGGTG 660
Query 647 CAAGATGCATATGTGTTGTGCAGAGTCTTCCACAAGAATAACATTGGGCCACCAAGTGGG 706
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 661 CAAGATGCATATGTGTTGTGTAGAGTCTTCCACAAGAATAACATTGGGCCACCAAGTGGG 720
Query 707 AACAGATATGCGCCGTTCATGGAAGAGGAATGGGCTGATGATGCAGGAGCTCTGATTCCA 766
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 721 AACAGATATGCTCCGTTCATGGAAGAGGAATGGGCTGATGATGAAGGAGCTCTGATTCCA 780
Query 767 GGAATAGACGTTAAGCTCAGGCTAGAGCCGCCGCCAGTAGCCAATGGAAACAACCAGATG 826
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 781 GGAATAGACGTTAAGCTCAGGCTAGAGCCGCCGCCAGTAGCCAATGGAAACGACCAGATG 840
Query 827 GACCAGGAAATCCAGTCAGGCAGCAAGAGTCTCATCAACATCAATGAGCCACCGAGAGAG 886
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 841 GACCAGGAAATCCAGTCAGCCAGCAAGAGTCTCATCAACATCAATGAGCCACCGAGAGAG 900
Query 887 ACAGCTCCAATGGATATCGAACCTAACCAACAGAATCATCATGAGAATGAGCTCAAGCCG 946
||||||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||
Sbjct 901 ACAGCTCCACTGGATATCGAATCGGACCAACAGAATCATCATGAGAATGACCTCAAGCCG 960
Query 947 CAGGAGCATAACAACAATAATAATTATGATGAAAACGAGGAAACACTCAAACGCGAGCAC 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 GAGGAGCATAACAACAATAATAATTATGATGAAAACGAGGAAACACTCAAACGCGAGCAG 1020
Query 1007 ACGGAAGAAGATGAGCGTCCTGCTCCACCTGTATGTGTTCTCAACAAAGAAGCTCCATTA 1066
| ||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||
Sbjct 1021 ATGGAAGAAGAGGAGCGTCCTCCTCGACCTGTATGCGTTCTCAACAAAGAAGCTCCATTA 1080
Query 1067 CCTCTCCTGCAATACAAACGTAGACGCCAGAA-TGAGTCAAACAACAACTCAAGCAGGAA 1125
||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||||||
Sbjct 1081 CCTCTTCTGCAATACAAACGTAGACGCCA-AAGCGAGTCCAACAACAACTCAAGCAGGAA 1139
Query 1126 CACACAGGACCATTGTTCGTCCACAACAACAACCGTCGACAATACAACCACCTTAATCTC 1185
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1140 CACACAGGACCATTGTTCGTCCACAACAACAACTGTCGACAATACAACCACTTTAATCTC 1199
Query 1186 ATCATCTGCCGCTGCCACCAACACTGCCATCTCTGCATTGCTTGAGTTCTCACTCATGGG 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 ATCATCTGCCGCTGCCACCAACACTGCCATCTCTGCATTGCTTGAGTTCTCACTCATGGG 1259
Query 1246 TATCTCCGACAAGAAAGAAAAGCTGCAGCAACCGCTACGTCCTCACAAGGAACCTTCT-C 1304
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |
Sbjct 1260 TATCTCCGACAAGAAAGAAAAGCCGCAGCAACCGCTACGTCCTCACAAGGAACCTT-TGC 1318
Query 1305 CTCCTCAAACTCCACTTGCATCTCCTGAAGAGAAGGTTAATGATCTCCAGAAGGAGATTC 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 CTCCTCAAACTCCACTTGCATCTCCTGAAGAGAAGGTTAATGATCTCCAGAAGGAGATTC 1378
Query 1365 ACCAGATGTCTGTTGAAAGAGAAACTTTCAAGCTTGAAATGATGAGTGCAGAAGCTATGA 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 ACCAGATGTCTGTTGAAAGAGAAACTTTCAAGCTTGAAATGATGAGTGCAGAAGCTATGA 1438
Query 1425 TCAGTATTCTGCAGTCAAGGATCGATGCGCTGCGTCAGGAGAACGAGGAACTTAAGAAGA 1484
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1439 TCAGTATTCTCCAGTCAAGGATCGATGCGCTGCGTCAGGAGAACGAGGAACTCAAGAAGA 1498
Query 1485 ACAATGCCAATGGACAATAAAGGCTCTAAAACCATCTCTCCAGGTTACTTCTTCTTGCTC 1544
||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |
Sbjct 1499 ACAATGCTAATGGACAATAAAGGCTCTAAAAACATCTCTCCAGGTTACTTCTTATTGCCC 1558
Query 1545 TTCGCCTTTTA----GCTTTAATCTCCCTAATATTATGAGCCATCTATGTAGCTCCTCTA 1600
||||||||||| |||||||||||||||||| ||||| ||||||| |||||||||||
Sbjct 1559 TTCGCCTTTTATTTAGCTTTAATCTCCCTAATACTATGACCCATCTACATAGCTCCTCTA 1618
Query 1601 GACGGATTGCGAACCATGTGAATCTCTGTTGTAACATAGGATAAAACGGATTCGAGCCCC 1660
||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 GACAGATTGCGAACTGTGTGAATCTCTGTTGTAACATAGGATAAAACGGATTCGAGCCCC 1678
Query 1661 TGAGCCGAGTGTTTTATCCTTCtttttttttttttttttGGATGTTCCTGCATCTTTTGA 1720
||||| |||||||||||||||||| ||||||| | | |||||||| ||||||||||||
Sbjct 1679 TGAGCTGAGTGTTTTATCCTTCTTCTTTTTTTGTGT---GGATGTTCTTGCATCTTTTGA 1735
Query 1721 GAACAGTTT--AGGTTGTTGCTCCATTGTCATATATCATCTATCTATTTAGTCTTTTCAG 1778
||||| ||| |||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 1736 GAACATTTTTTAGGTTG---CTCCATTGTCATATATCATCTATCTATCTAGTCTTTTCAG 1792
> AT3G10480.3 | Symbols: ANAC050, NAC050 | NAC domain containing
protein 50 | chr3:3264348-3267090 FORWARD LENGTH=1952
Length=1952
Score = 872 bits (472), Expect = 0.0
Identities = 824/981 (84%), Gaps = 76/981 (8%)
Strand=Plus/Plus
Query 833 GAAATCCAGTCAGGC-AGCAA-GAGTCTCATCAACATCAATGAGCCACCGAGAGA-GAC- 888
||||| || ||| || ||||| || |||||| |||||||| |||| ||||||||| | |
Sbjct 984 GAAATGCATTCA-GCAAGCAAGGA-TCTCATTAACATCAACGAGCTACCGAGAGATG-CT 1040
Query 889 AGCTCCAATGGATATCGAACCTAACCAACAGAATCATCATGAGAATGAGC-TCAAGCCGC 947
| |||||||||| ||||||||||||||||||||||||||||||| || | ||||||| |
Sbjct 1041 A-CTCCAATGGACATCGAACCTAACCAACAGAATCATCATGAGAGTG-CCTTCAAGCCAC 1098
Query 948 AGGAGCA-TAACAACAATAATAATTATGATGAAAACGAGGAAACACTCAAACGCGAGCAC 1006
||||| | ||||||| ||| | |||||| ||| | ||||| ||||||||||||||||||
Sbjct 1099 AGGAG-AGTAACAACCATAGTGGTTATGAAGAAGATGAGGACACACTCAAACGCGAGCAC 1157
Query 1007 ACGGAAGAAGATGAGCGTCCTGCTCCACCTGTATGTGTTCTCAACAAAGAAGCTCCATTA 1066
| ||||||||||||||| | |||| || |||| |||||||||||||||||||| ||
Sbjct 1158 GCAGAAGAAGATGAGCGT-C--CTCCTTCTCTATGCATTCTCAACAAAGAAGCTCCACTA 1214
Query 1067 CCTCTCCTGCAATACAAACGTAGACGCCAGAATGAGTCAAACAACAACTCAAGCAGGAAC 1126
||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct 1215 CCTCTCCTGCAATACAAACGTAGACGCCAAAACGAGTCCAACAACAACTCAAGCAGGAAC 1274
Query 1127 ACACAGGACCATTGTTCGTCCACAACAACAACCGTCGACAATACAACCACCTTAATCTCA 1186
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1275 ACACAGGACCATTGTTCGTCCACAATAACAACCGTCGACAATACAACCACCTTAATCTCA 1334
Query 1187 TCATCTGCCGCTGC--C-ACCAACACTGCCATCTCTGCATTGCTTGAGTTCTCACTCATG 1243
|||||||| ||||| | |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1335 TCATCTGCTGCTGCTGCTACCAACACTGCCATCTCTGCATTGCTTGAGTTCTCACTTATG 1394
Query 1244 GGTATCTCCGACAAGAAAGAAAAGCTGCAGCAACCGCTACGTCCTCACAAGGAACCTTCT 1303
||||||||||||||||||||||| | |||| || | | | |||| |||||
Sbjct 1395 GGTATCTCCGACAAGAAAGAAAACCAGCAG-AA-----A-G-----A---GGAAACTTCT 1439
Query 1304 CCTCCTCAAACTCCACTTGCATCTCCTGAAGAGAAGGTTAATGATCTCCAGAAGGAGATT 1363
|||||| | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1440 CCTCCT-AG--TCCAATTGCATCTCCTGAAGAGAAGGTTAATGATCTCCAGAAGGAGGTT 1496
Query 1364 CACCAGATGTCTGTTGAAAGAGAAACTTTCAAGCTTGAAATGATGAGTGCAGAAGCTATG 1423
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1497 CACCAGATGTCTGTTGAAAGAGAAACTTTCAAGCTTGAGATGATGAGTGCAGAGGCTATG 1556
Query 1424 ATCAGTATTCTGCAGTCAAGGATCGATGCGCTGCGTCAGGAGAACGAGGAACTTAAGAAG 1483
||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1557 ATCAGCATTCTCCAGTCAAGAATCGATGCGCTGCGTCAGGAGAACGAGGAACTTAAGAAG 1616
Query 1484 AACAATGCCAATGGACAA--TA---AAGGCTCTAAAACCATCTCTCCAGGT-TA--CTTC 1535
|| || |||| ||||||| || || | | ||| |||||||||||| | ||||
Sbjct 1617 AAGAACGCCAGTGGACAAGCTAGTTAAACCACCGCAAC-ATCTCTCCAGGTGTCTTCTTC 1675
Query 1536 TTCTTG--CT-CTTC---GCCTTTTAGCTTTAATCTCCCTAATATTATGAGCCATCTATG 1589
||||| || |||| |||| |||||| |||||| | ||||| ||||||| || |||
Sbjct 1676 TTCTTCTTCTTCTTCTTTGCCTCTTAGCTGTAATCTTCTTAATAGTATGAGCTATGGATG 1735
Query 1590 TAGCTCCT-CTAGACGGATTGCGAA-CCATGTGAATCTCTGTTGTAACAT-AGGATAAAA 1646
||||| || | |||||||| ||| || | |||||||||||||||| || |||||||||
Sbjct 1736 TAGCTTCTTC-AGACGGATCA-GAAACCTTATGAATCTCTGTTGTAAAATTAGGATAAAA 1793
Query 1647 CGGATTCG-AGCC--CCTGAGCCGAGTGTTTTATCCTTCtttttttttttttt--tttGG 1701
|||| || |||| || | | || || || | || |||| | |||||| |||||
Sbjct 1794 CGGAA-CGGAGCCAACCA-A-CT-AG-GTCTT-T--TTATTTTATCCTTTTTTACTTTGG 1845
Query 1702 ATGTTCCTGCATCTTTTGAGAACAGTTT-AGGTTGTTGCTCCATTGTC--ATAT-ATCAT 1757
||||| |||||||||||| ||||| ||| ||| || | | | |||||| |||| |||||
Sbjct 1846 ATGTTTCTGCATCTTTTGGGAACATTTTCAGGCTGAT-C-C-ATTGTCGTATATTATCAT 1902
Query 1758 CTATCTATTTAGTCTTTTCAG 1778
|||||||| ||||||||||||
Sbjct 1903 CTATCTATCTAGTCTTTTCAG 1923
Score = 636 bits (344), Expect = 0.0
Identities = 425/465 (91%), Gaps = 2/465 (0%)
Strand=Plus/Plus
Query 369 TGTTTTCGAGGTTGAAGACAAGGGACCAAGAATGGTACTTCTACAGCGCATTAGATAAGA 428
||||||||| |||||| || ||||||||||||||||||||| ||| || ||||||||||
Sbjct 382 TGTTTTCGAAGTTGAAAACTCGGGACCAAGAATGGTACTTCTTCAGTGCGTTAGATAAGA 441
Query 429 AGTATGGAAACGGCGCTAGGATGAACCGAGCAACTAACAGAGGGTACTGGAAAGCAACTG 488
|||| || || || ||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 442 AGTACGGTAATGGTGCTAGGATGAATCGAGCAACTAACAAAGGGTACTGGAAAGCAACTG 501
Query 489 GAAAAGACAGAGAAATCCGCCGTGACATTCAGCTGCTCGGTATGAAAAAGACGCTTGTTT 548
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||
Sbjct 502 GAAAAGACAGAGAAATCCGCCGGGATATTCAGTTGCTCGGTATGAAAAAGACGCTTGTTT 561
Query 549 TCCACAGCGGGCGTGCCCCAGACGGGCTTCGGACTAATTGGGTCATGCACGAGTATCGCC 608
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 562 TCCACAGCGGGCGTGCTCCAGACGGCCTTCGGACTAATTGGGTCATGCACGAGTATCGCC 621
Query 609 TTGTGGAATATGAAACCGAGAA-AAACGGAAACCTGGTGCAAGATGCATATGTGTTGTGC 667
|||||||||||||||| || || ||||||| |||| |||| ||||||||||||||||||
Sbjct 622 TTGTGGAATATGAAACTGA-AACTAACGGAAGCCTGCTGCAGGATGCATATGTGTTGTGC 680
Query 668 AGAGTCTTCCACAAGAATAACATTGGGCCACCAAGTGGGAACAGATATGCGCCGTTCATG 727
||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 681 AGAGTGTTTCACAAGAATAACATTGGGCCACCAAGTGGGAACAGATATGCGCCATTCATG 740
Query 728 GAAGAGGAATGGGCTGATGATGCAGGAGCTCTGATTCCAGGAATAGACGTTAAGCTCAGG 787
||||| ||||||||||||| || ||||||||||||||||||||||||||||| | |||||
Sbjct 741 GAAGAAGAATGGGCTGATGGTGGAGGAGCTCTGATTCCAGGAATAGACGTTAGGGTCAGG 800
Query 788 CTAGAGCCGCCGCCAGTAGCCAATGGAAACAACCAGATGGACCAG 832
||||| | | ||| ||||||||||||||||||||||||||||
Sbjct 801 GTAGAGGCTCTACCACAAGCCAATGGAAACAACCAGATGGACCAG 845
Score = 350 bits (189), Expect = 3e-95
Identities = 246/272 (90%), Gaps = 9/272 (3%)
Strand=Plus/Plus
Query 104 AAATTGAG--GAAACCCTAG-AACAAGTACGGTC-TTTACTTTGC-TATAATGGGTCGCG 158
|||||||| |||| ||||| ||||| ||||||| ||| ||| | | | ||||||||||
Sbjct 13 AAATTGAGAAGAAAACCTAGAAACAAATACGGTCTTTTTTTTTTCTTTTTATGGGTCGCG 72
Query 159 AATCTCTGGCTGTTGTG-ACTGCGCCGCCCTCGGCGACTGCTCCGGGTACTGCTACTG-C 216
||||||||||||||||| || ||||||| ||||||||||| || |||||||| || |
Sbjct 73 AATCTCTGGCTGTTGTGTCCT-CGCCGCCATCGGCGACTGCGCCCAGTACTGCT-GTGTC 130
Query 217 GGCTACCTCGCTTGCTCCTGGCTTCCGATTTCATCCGACTGATGAGGAACTCGTGAGCTA 276
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 131 GGCTACCTCGCTTGCTCCTGGCTTTCGATTTCATCCGACTGATGAGGAACTCGTGAGCTA 190
Query 277 TTACTTGAAGAGGAAGGTTCTGGGCAAACCTGTACGCTTCGATGCGATTGGAGAGGTCGA 336
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 191 TTACTTGAAGAGGAAGGTTCTGGGTAAACCTGTACGCTTCGATGCGATTGGAGAGGTAGA 250
Query 337 TATCTATAAGCATGAGCCCTGGGATTTAGCAG 368
|||||| |||||||||||||||||||||||||
Sbjct 251 TATCTACAAGCATGAGCCCTGGGATTTAGCAG 282
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87951354840
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5