BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478384
Length=1862
Score E
Sequences producing significant alignments: (Bits) Value
AT3G10500.1 | Symbols: anac053, NAC053 | NAC domain containing ... 2475 0.0
AT5G04410.1 | Symbols: NAC2, anac078 | NAC domain containing pr... 813 0.0
> AT3G10500.1 | Symbols: anac053, NAC053 | NAC domain containing
protein 53 | chr3:3271490-3274030 FORWARD LENGTH=2021
Length=2021
Score = 2475 bits (1340), Expect = 0.0
Identities = 1668/1818 (92%), Gaps = 56/1818 (3%)
Strand=Plus/Plus
Query 51 TTTTGGTCCACCGAGTATATATGGGTCGTGGCTCAGTGACGTCGCTCGCTCCTGGGTTCC 110
|||||||||| |||| |||||||||||||||||||| || ||||||||||||||||| |
Sbjct 211 TTTTGGTCCATCGAG--TATATGGGTCGTGGCTCAGTAACATCGCTCGCTCCTGGGTTTC 268
Query 111 GCTTTCATCCCACGGACGAAGAACTCGTTCGTTACTACCTTAAACGCAAGATCTGCAATA 170
| ||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||
Sbjct 269 GTTTTCATCCCACAGACGAAGAACTCGTTCGTTACTATCTGAAACGAAAGATCTGCAATA 328
Query 171 AACCCTTTAAGTTTGATGCTATCTCTGTTACCGATGTATACAAATCCGAGCCGTGGGATC 230
|||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 329 AACCTTTTAAGTTCGATGCTATCTCTGTTACCGATGTATACAAATCTGAGCCTTGGGATC 388
Query 231 TCCCAGACAAGTCGAAGCTGAAAAGTAGAGACTTGGAGTGGTACTTCTTCAGTATGCTTG 290
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 389 TCCCAGACAAGTCGAGGCTGAAAAGTAGAGACTTGGAGTGGTACTTCTTCAGTATGCTTG 448
Query 291 ATAAGAAGTATAGAAATGGATCGAAGACGAATCGTGCCACTGAGATGGGATATTGGAAGA 350
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 449 ATAAGAAGTATAGAAATGGATCAAAGACGAATCGTGCGACTGAGATGGGATATTGGAAGA 508
Query 351 CCACAGGGAAAGATCGAGAGATTCTTAATGGCTCAAAAGTCGTTGGGATGAAGAAGACTC 410
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 509 CTACAGGGAAAGATCGAGAGATTCTTAATGGTTCAAAAGTCGTTGGGATGAAGAAGACTC 568
Query 411 TTGTTTATCACAAAGGTAGAGCTCCTCGTGGCCAAAGAACCAATTGGGTTATGCATGAGT 470
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 569 TTGTTTATCACAAAGGTCGAGCTCCTCGTGGCGAAAGAACCAATTGGGTTATGCATGAGT 628
Query 471 ATCGCTTGGTTCATGAAGACCTTGATAAAACCGGTGTTCACCAAGATGCGTTTGTGCTTT 530
|||| |||||| || |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 629 ATCGGTTGGTTGATCAAGACCTTGATAAAACTGGTGTTCACCAAGATGCGTTTGTGCTTT 688
Query 531 GTAGGATTTTTCAGAAGAGTGGGTCGGGACCTAAAAATGGAGAGCAGTATGGTGCTCCAT 590
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |
Sbjct 689 GTAGGATTTTTCAGAAGAGTGGCTCCGGACCTAAAAATGGAGAGCAGTACGGTGCTCCGT 748
Query 591 TTGTTGAGGAAGAGGGGGAGGAGGAGGATGATATGACATTTGTACCTAATCAAGAAGATC 650
|||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 749 TTGTTGAGGAGGAGTGGGAGGAGGAGGATGATATGACATTTGTACCTGACCAAGAAGATC 808
Query 651 TTGGAAGTCAAGATCATGTTTATGTCGATATGGATGACATTGATCAGAAGTCTGAAAACT 710
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 809 TTGGAAGTGAAGATCATGTTTATGTCCATATGGATGACATTGATCAGAAGTCTGAAAACT 868
Query 711 TTGTGGTCTATGATGCCATTCCTATCCCGTTAAACTTTATTCACGGGGAGTCGAGCAATA 770
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 869 TTGTGGTCTATGATGCCATTCCTATTCCGTTAAACTTTATTCACGGGGAGTCGAGCAATA 928
Query 771 ATGTTGAAACAAACTACTCAGACTCCGTAAACTATATACAAC---CAGGAAACTATGTGG 827
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||
Sbjct 929 ATGTTGAAACAAACTACTCAGACTCCATAAACTATATACAACAAACAGGAAACTATATGG 988
Query 828 ATTCTGGTGGCTACTTTGAGCAACCAGCAGAATCTTATGAGAAAGATCAGAAGCCTATTA 887
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 989 ACTCTGGTGGCTACTTTGAGCAACCAGCAGAATCTTATGAGAAAGATCAGAAGCCTATCA 1048
Query 888 TTCGTGATGGTAACCTTCAAAATGACGCATTCTTTCAAGAGGAAGAAATTGGCTGTGGTG 947
| ||||| || | | | | || ||| ||| | |||| |||||| ||||| |
Sbjct 1049 TCCGTGACCGTGA--TGG----T-A-GC---CTT-CAAAATGAAGGAATTGGATGTGGGG 1096
Query 948 TCCAGGATGAGCACACCTCAAA-TTTGCTATCTTCTGAAAACATCTTTGGGACTGATACA 1006
||||||| ||||| | ||| ||||| ||||||||| |||||||||||||||||||||
Sbjct 1097 TCCAGGACAAGCACTCGG-AAACTTTGCAATCTTCTGACAACATCTTTGGGACTGATACA 1155
Query 1007 TCATGCTACAATGATTTTCCAGTTGAGAGCAACTACTTGACTGGTGAGGCGTTTCTGGAT 1066
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 1156 TCATGCTACAATGATTTTCCAGTTGAGAGCAACTATTTGATTGGTGAGGCGTTTCTGGAT 1215
Query 1067 CCGAACAGTAATCTTCTGCAGAATGATGGTCTGTACCTGGAAACAAATGATCTCAGCAGT 1126
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1216 CCGAACAGTAATCTTCTGGAGAATGATGGTCTGTACCTGGAAACAAATGATCTCAGTAGT 1275
Query 1127 ACCCAGCAAGATGGTTTCGACTTTGAAGATTATCTTACCTTCTTTGATGAGGACGATGAG 1186
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1276 ACTCAGCAAGATGGTTTCGACTTTGAAGATTATCTTACCTTCTTTGATGA--A--A---- 1327
Query 1187 AGTGCTCAAAACTTGACTTTTGATCCTTCTCAACTGATGGGAAATGAAGATATTTTTGTC 1246
|| || | |||||||| ||||||||||||||||||||| ||||| ||
Sbjct 1328 ----CT------TT---T---GATCCTTCGCAACTGATGGGAAATGAAGATGTTTTTTTC 1371
Query 1247 GATCAAGAAGAGCTCTTCCAAGAGGTCGAGACTAAGGAACTAAAGAAAGAGGAGACGTCA 1306
||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||| |||
Sbjct 1372 GATCAAGAAGAGCTCTTTCAAGAGGTTGAGACTAAGGAACTAGAGAAAGAGGAGACTTCA 1431
Query 1307 GGAAGCAAACATGTGGTTGAAGAAAAGGAAAAGGATGAAGCATCTTGCTCAAAACAAGTT 1366
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1432 AGAAGCAAACATGTGGTGGAAGAAAAGGAAAAGGATGAAGCATCTTGTTCAAAACAAGTT 1491
Query 1367 GATGCAGATGCAACAGAGTTTGAGCCAGATTACAAGTACCCGTTCCTCAAGAAGGCAAGC 1426
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1492 GATGCAGATGCAACAGAGTTTGAGCCAGATTACAAGTACCCGTTACTAAAGAAGGCAAGC 1551
Query 1427 CACATGTTGGCCGCTATTCCTGCTCCGCCTGCATTTGCTTCTGAGTTGCCTACAAAGGAT 1486
|||||||||| |||||||||||||||| |||| |||||||||||| ||||||||||||
Sbjct 1552 CACATGTTGGGTGCTATTCCTGCTCCGCTTGCAAATGCTTCTGAGTTCCCTACAAAGGAT 1611
Query 1487 GCAGCTATCCGGTTACACGCAGCACAATCATCAGGTTCAGTTCATGTAACCGCAGGTATG 1546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1612 GCAGCTATCCGGTTACACGCAGCACAATCATCAGGTTCAGTTCATGTAACCGCAGGTATG 1671
Query 1547 ATCACAATATCAGACAGCAACATGGGCTGGTCATACGGCAAAAACGGGAACTTTGACTTG 1606
||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 1672 ATCACGATATCAGACAGCAACATGGGCTGGTCATACGGCAAAAACGAGAACCTTGACTTG 1731
Query 1607 ATCCTTTCTTTGGGGTTGGTCCAAGGGAATACTGCCTCCGAGAAAA-CAGGAAATAGTTC 1665
|||||||||||||||||||||||||||||||| ||| |||| |||| |||| ||||||||
Sbjct 1732 ATCCTTTCTTTGGGGTTGGTCCAAGGGAATACCGCCCCCGA-AAAATCAGGGAATAGTTC 1790
Query 1666 AGCATGGGCAATGTTAATCTTCATGTGTCTCTGGGTCCT-CGTACTCTCAGTTAGTTTCA 1724
|||||||||||||||||| ||||||||| ||||||| || | ||||||||||||||||||
Sbjct 1791 AGCATGGGCAATGTTAATATTCATGTGTTTCTGGGTTCTTC-TACTCTCAGTTAGTTTCA 1849
Query 1725 AAGTGAGCATTTTGGTCTCTTCCGGGTGATAGGTACCCCTTTCTT-TTCAAACAAGACTT 1783
||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||
Sbjct 1850 AAGTGAGCATTTTGGTCTCTTCCAGGTGATAGGTAACCCTTTCTTGTTCAAACAAGACTT 1909
Query 1784 TTGTGTTTGTACATTGATATAGATTTACTTGCAGTGTTCTGCTGCTCAATGTTTTATTCT 1843
|||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1910 TTGTGTTTGTACATTGATATAGATGAACTTGCAGTGTTC--------AATGTTTTATTCT 1961
Query 1844 CTAATTATATTGAATAAA 1861
||||| ||||||||||||
Sbjct 1962 CTAATAATATTGAATAAA 1979
> AT5G04410.1 | Symbols: NAC2, anac078 | NAC domain containing
protein 2 | chr5:1243758-1246684 FORWARD LENGTH=2194
Length=2194
Score = 813 bits (440), Expect = 0.0
Identities = 1202/1551 (77%), Gaps = 127/1551 (8%)
Strand=Plus/Plus
Query 71 ATGGGTCGTGGCTCAGTGACGTCGCTCGCTCCTGGGTTCCGCTTTCATCCC-ACGGACGA 129
|||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||| ||
Sbjct 223 ATGGGTCGTGGCTCAGTGACGTCGCTTGCTCCTGGGTTCCGTTTTCA-CCCGACGGATGA 281
Query 130 AGAACTCGTTCGTTACTACCTTAAACGCAAGATCTGCAATAAACCCTTTAAGTTTGATGC 189
||||| ||||| ||||||||||| || ||| ||||||| |||||||||||||| |||||
Sbjct 282 GGAACTTGTTCGCTACTACCTTAAGCGTAAGGTCTGCAACAAACCCTTTAAGTTCGATGC 341
Query 190 TATCTCTGTTACCGATGTATACAAATCCGAGCCGTGGGATCTCCCAGACAAGTCGAAGCT 249
||| || || ||||| ||||||| || ||||| |||||||| ||||| |||||||||||
Sbjct 342 TATTTCCGTCACCGACATATACAAGTCTGAGCCTTGGGATCTACCAGATAAGTCGAAGCT 401
Query 250 GAAAAGTAGAGACTTGGAGTGGTACTTCTTCAGTATGCTTGATAAGAAGTATAGAAATGG 309
|||||||||||||||||| ||||||||||| |||||||| ||||||||||| || |||||
Sbjct 402 GAAAAGTAGAGACTTGGAATGGTACTTCTTTAGTATGCTGGATAAGAAGTACAGTAATGG 461
Query 310 ATCGAAGACGAATCGTGCCACTGAGAT-GGGATATTGGAAGACCACAGGGAAAGATCGAG 368
|| |||||||||||||| || |||| ||| ||||||||||| || ||||||||||| |
Sbjct 462 TTCCAAGACGAATCGTGCTACGGAGAAAGGG-TATTGGAAGACGACTGGGAAAGATCGGG 520
Query 369 AGATTCTTAATGGCTCAAAAGTCGTTGGGATGAAGAAGACTCTTGTTTATCACAAAGGTA 428
|||||| |||||| |||| ||||||||||||||||||||| |||||||||||||| |||
Sbjct 521 AGATTCGTAATGGTTCAAGAGTCGTTGGGATGAAGAAGACACTTGTTTATCACAAGGGTC 580
Query 429 GAGCTCCTCGTGGCCAAAGAACCAATTGGGTTATGCATGAGTATCG-CTTGGTTCATGAA 487
||||||||||||| |||| |||||||||||||||||||||||||| ||| | ||||
Sbjct 581 GAGCTCCTCGTGGTGAAAGGACCAATTGGGTTATGCATGAGTATCGGCTTTCTG-ATGAG 639
Query 488 GACCTTGATA-AAACC-GGTGTTC-ACCAAGATGCGTTTGTGCTT-TGTAGGATTTTTCA 543
||| |||| | ||| | ||||| | || |||| || | |||| || |||||||| || ||
Sbjct 640 GAC-TTGA-AGAAAGCTGGTGTGCCAC-AAGAAGCATATGTG-TTATGTAGGATATTCCA 695
Query 544 GAAGAGTGGGT-CGGGACCTAAAAATGGAGAGCAGTATGGTGCTCCATT-TGTTGAGGAA 601
||| ||||| | |||| ||||| ||||| ||||||||||||||||| || | |||||||
Sbjct 696 GAAAAGTGG-TACGGGTCCTAAGAATGGGGAGCAGTATGGTGCTCC-TTATCTTGAGGAG 753
Query 602 GAGGGGGAGGAGGAGGATG-ATATGACATT-TGTACCTAATCAAGAAGATCTT--G-GAA 656
||| |||| || || ||| | ||||| || ||||||| |||||| | | || | |||
Sbjct 754 GAGTGGGAAGA--AG-ATGGA-ATGAC-TTATGTACCTGCTCAAGATGCT-TTCAGTGAA 807
Query 657 G--T---C----AA-GATCATGTTTATGTCGATATGGATGACATTGATC-AGAAGTCTGA 705
| | | || ||| |||||||||||||||| ||||||||||| | ||||| | ||
Sbjct 808 GGATTGGCTTTGAATGATGATGTTTATGTCGATATTGATGACATTGA-CGAGAAGCCCGA 866
Query 706 AAACTTTG-TGGTCTATGATGCCATTCCTAT-C--CCGTTAAACT-TTATTCACGGGGAG 760
||| | || |||||||||||||| ||||||| | || | || || || | || |||||
Sbjct 867 AAA-TCTGGTGGTCTATGATGCCGTTCCTATTCTACC-T-AA-CTATTGT-CATGGGGAA 921
Query 761 TCGAGCAATAATGTTGAAACA---AACTACTCAGACTCCGTAAACTATATACAACCAGGA 817
|| || || ||||||||| || || ||||||||||| | ||| || || |||||||||
Sbjct 922 TCAAGTAACAATGTTGAATCAGGCAATTACTCAGACTCTGGAAATTACATTCAACCAGGA 981
Query 818 AACTATGT-G--GATTCTGGTGGCTACTTTGAGCAACCAGCAGAATCTTATGAGAAAGAT 874
||| |||| | || |||||||| |||||||| |||||| ||| ||| |||| |||||
Sbjct 982 AACAATGTTGTCGACTCTGGTGGGTACTTTGAACAACCAATTGAAACTTTTGAGGAAGAT 1041
Query 875 CAGAAGCCTATTATTCGTGATGGTAACCTTCAAAAT-GA-CGCATTCTTTCAAGAGGAAG 932
| |||||||||||| || || |||| | |||| | | | | | |||| |||||||
Sbjct 1042 CGGAAGCCTATTATACGGGAGGGTAGCATTCAGCCTTGTTCTC-TG-TTTCCAGAGGAAC 1099
Query 933 AAATTGGCTGTGGTGTCCAGGATGAGCACACC-TCAAATTTGCTATCTTCTGAA-AACA- 989
|||||||||||||||| || || || | | || | || |||||| || || |
Sbjct 1100 AAATTGGCTGTGGTGTGCAAGACGAAAATGTGGTGAA-TCTGGAATCTTCC-AACAATAA 1157
Query 990 TCT-TTGGGA-CTGATACATCATGCTACAATGATTTTCC-AGTTGAG-AGCAACTACTTG 1045
| | || | | ||||||||| |||||| ||| |||| | |||| | ||||| ||
Sbjct 1158 TGTGTTTGTAGCTGATACAT---GCTACAGTGACATTCCTA-TTGATCAT-AACTATTT- 1211
Query 1046 ACTGG-TGAGGCGTTTC-TGGATCCGAACAGTAATCTTCTGCAGAATGATGGTCTGTACC 1103
|| | |||| | || | ||||||| || | ||||||| | || |||||||||||||
Sbjct 1212 ACCCGATGAGCCATT-CATGGATCCTAATAACAATCTTCCACTCAACGATGGTCTGTACC 1270
Query 1104 TGGAAACAAATGATCTCAGCAGTACCCAGCAAGATGGTTTCGACTTTGAAGATTATCTTA 1163
||||||| |||||||||||| || | || ||||||| ||| |||| ||||||||||| |
Sbjct 1271 TGGAAACGAATGATCTCAGCTGTGCTCAACAAGATGATTTTAACTTCGAAGATTATCTCA 1330
Query 1164 CCTTCTTTGATGAGGACGATGAGAGTGCTCAAAACTTGACTTTTGATCC-TTCTCAACTG 1222
|||||||||||| |||| | | | ||||||||||| | ||||| | |
Sbjct 1331 GCTTCTTTGATGA------TGAG-G-G-T------TTGACTTTTGA-CGATTCTCTATTA 1374
Query 1223 ATGGGAAATGAAGATATTT-TTGTCGATCAAGAAGAGCTCTT--CCA-AGAGGTCGAGAC 1278
|||||| ||||||| ||| || | | ||||||| | ||| ||| | | | | |
Sbjct 1375 ATGGGACCTGAAGAT-TTTCTTCCCAACCAAGAAGC-C-CTTGACCAGAAACCT-GCCCC 1430
Query 1279 TAAGGAACTAAAGAAAGAGGAGACGTCAGGAAGCAAACATGTGGTTGAAGAAAAGGAAAA 1338
||| ||| | |||| |||| || ||||| ||||| | | || || ||||||||||
Sbjct 1431 TAAAGAATTGGAGAAGGAGGT--CG-CAGGAGGCAAAGAGGCAGTGGAGGAAAAGGAAAG 1487
Query 1339 -GGATGAAGCATCTTGCT-CAAAACAAGTTGATGCAGATG-CAACAGAGTTTGAGCCAGA 1395
|| |||| ||||| || ||||||||| | | ||||| ||| || ||||| |||
Sbjct 1488 TGGC-GAAGGATCTT-CTTCAAAACAAGAT-A--CAGATTTCAAG-GACTTTGATTCAGC 1541
Query 1396 TTAC-AAGTACCCGTTCCTCAAGAAGGCAAGCCACATG-TTGGCCGCTATTCCTGCTCCG 1453
| | |||||||| || ||||| ||| | ||||||||| |||| || |||||| ||||
Sbjct 1542 TC-CGAAGTACCCATTTCTCAAAAAGACGAGCCACATGCTTGGA-GCCATTCCTACTCCA 1599
Query 1454 CCTGCATTTGCTTCTGAGTTGCCTA-CAAAGGATGCAGCTATCCGGT-TACACGCAGCAC 1511
|| |||||||||| |||| || | ||||||| ||| || || | ||||||||||||
Sbjct 1600 TCTTCATTTGCTTCACAGTT-CCAAACAAAGGACGCA---ATGCG-TCTACACGCAGCAC 1654
Query 1512 AATCATCAGGTTCAGTTCATGTAACCGCAGGTATGATCACAATATCAGACA 1562
|||| || ||||||||||| || || ||||||||||| | ||||||| |||
Sbjct 1655 AATCTTCTGGTTCAGTTCACGTGACTGCAGGTATGATGAGAATATCAAACA 1705
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92168200620
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5