BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478392
Length=1684
Score E
Sequences producing significant alignments: (Bits) Value
AT3G10570.1 | Symbols: CYP77A6 | cytochrome P450, family 77, su... 2603 0.0
AT5G04660.1 | Symbols: CYP77A4 | cytochrome P450, family 77, su... 1160 0.0
> AT3G10570.1 | Symbols: CYP77A6 | cytochrome P450, family 77,
subfamily A, polypeptide 6 | chr3:3302102-3303839 FORWARD LENGTH=1738
Length=1738
Score = 2603 bits (1409), Expect = 0.0
Identities = 1543/1609 (96%), Gaps = 4/1609 (0%)
Strand=Plus/Plus
Query 23 gaagaagaaaaacaaaaacaagaagct-aaaaTGTCTCTTCTTTCGTTTCCTCCCACTTT 81
||| ||||| || |||||||||||||| ||||||||| | ||||||||||||| ||||||
Sbjct 25 GAA-AAGAAGAAGAAAAACAAGAAGCTAAAAATGTCTATCCTTTCGTTTCCTCACACTTT 83
Query 82 CTTTAACATAC-CTCCTTCACTCTTCTACACCATCCTTATATCCAGTTTAGTTCTACTGA 140
||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 84 CTTTAACAT-CTCTCCTTCACTCTTCTACACTATCCTTATATCCAGTTTAGTTCTACTGA 142
Query 141 TCCTCACGCGCCGGAGTTCTAAATCAAAGCGCGTGAAGCTTCCACCAGGTCCTCCGGGTT 200
||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||| |
Sbjct 143 TCCTCACGCGCCGGAGTGCTAAATCAAAGATCGTGAAGCTTCCTCCAGGTCCTCCGGGGT 202
Query 201 GGCCGGTGGTTGGAAACCTCTTCCAATTCGCGCGCTCCGGGAAGCAGTTTTACGAGTATG 260
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 203 GGCCGGTGGTTGGAAACCTCTTCCAATTCGCGCGCTCCGGGAAGCAGTTTTACGAGTACG 262
Query 261 TTGATGATGTAAGGAAAAAATACGGTCCTATCTACACGTTGAGGATGGGAAGTCGAACAA 320
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 263 TTGACGATGTAAGGAAAAAATACGGTCCTATCTACACGTTGAGGATGGGAAGTCGAACAA 322
Query 321 TGATCATCATCTCTGATTCAGCTCTCGTCCACGACGTTCTGATTCAGCGTGGACCAATGT 380
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 323 TGATCATAATCTCTGATTCAGCTCTCGTCCACGACGTTCTGATTCAACGTGGACCAATGT 382
Query 381 TCGCAACCCGACCCACCGAGAATCCTACCCGAACTATCTTCAGCTCCAACACTTTCACCG 440
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 383 TCGCAACCCGACCCACCGAGAATCCGACCCGAACCATCTTCAGCTCCAACACTTTCACCG 442
Query 441 TCAACGCTTCAGCGTACGGACCCGTGTGGCGATCCCTGAGAAAGAACATGGTACAGAACA 500
| ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct 443 TTAACGCTTCAGCGTACGGTCCAGTATGGCGATCCCTGAGAAAGAACATGGTACAGAACA 502
Query 501 TGTTAAGCTCGATCCGGTTCAGAGAATTCGCGTCGTTGAGGCAATCCGCAATGGATAAAC 560
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 503 TGTTAAGCTCGATCCGGTTCAGAGAATTCGGGTCGTTGAGACAATCCGCAATGGATAAAC 562
Query 561 TCGTCGAGAGGATCAAATCAGAAGCTAAAGACAACGACGGTCTTGTTTGGGTACTAAGAA 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 563 TCGTCGAGAGGATCAAATCAGAAGCTAAAGACAACGACGGTCTTGTTTGGGTCCTAAGAA 622
Query 621 ACGCAAGATTCGCTGCGTTTTGTATTCTTTTAGAGATGTGTTTTGGAATCGAAATGGATG 680
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 623 ACGCAAGATTCGCTGCGTTTTGTATTCTTTTGGAGATGTGTTTTGGAATCGAAATGGATG 682
Query 681 AAGAATCGATTTTGAATATGGATCAAGTGATGAAGAAAGTTTTGATCACACTCAATCCAA 740
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 683 AAGAATCGATATTGAATATGGATCAAGTGATGAAGAAAGTGTTGATCACACTCAATCCAA 742
Query 741 GACTCGATGATTATCTCCCGATCCTTGCTCCGTTTTACTCCAAGGAGAGAGCAAGAGCTC 800
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 743 GACTCGATGATTATCTCCCGATTCTTGCTCCGTTTTATTCCAAGGAGAGAGCAAGAGCTC 802
Query 801 TCGAGGTTCGTCGTGAACAAGTTGATTTCATCGTTAAATTCATCGAGAGACGACGGAGAG 860
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 803 TCGAGGTTCGTTGTGAACAAGTTGATTTCATCGTTAAACTCATCGAGAGACGACGGAGAG 862
Query 861 CGATTCAGAATCCGGGGACTGATAAAACAGCGTCGTCTTTCTCTTACCTTGATACACTCT 920
|||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct 863 CGATTCAGAAGCCGGGGACTGATAAAACGGCGTCGTCTTTTTCTTATCTTGATACACTCT 922
Query 921 TTGACCTTAAAACCGAAGGTCGTAAAACGACGCCGTCTAATGAAGAGCTTGTGTCGCTTT 980
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 923 TTGACCTTAAAACCGAAGGTCGTATAACGACGCCGTCTAATGAAGAGCTTGTGTCGCTCT 982
Query 981 GCTCGGAGTTTCTTAACGGGGGTACGGATACGACGGGGACGGCGATCGAGTGGGGTATCG 1040
|||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 983 GCTCTGAGTTTCTTAACGGTGGTACGGATACGACGGGGACGGCGATCGAGTGGGGTATAG 1042
Query 1041 CGCAGCTGATCGTGAATCCTGAGATTCAATCTCGGCTCTACGATGAGATTAAATCAACGG 1100
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1043 CGCAACTGATTGTGAATCCTGAGATTCAATCTCGGCTCTACGATGAGATTAAATCAACGG 1102
Query 1101 TCGGAGATCGTGAGGTTGAGGAGAAAGATGTGGATAAAATGGTCTTTTTACAAGCCGTCG 1160
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1103 TTGGAGATCGTGAGGTTGAGGAAAAAGATGTGGATAAAATGGTCTTTTTACAAGCCGTTG 1162
Query 1161 TTAAGGAGATTTTACGGAAACATCCTCCGACGTACTTTACGTTGACTCACTCCGTGACGG 1220
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct 1163 TTAAGGAGATTTTACGGAAACATCCTCCGACATACTTTACGTTGACTCATTCCGTCACGG 1222
Query 1221 AGCCGACGACGGTCGGCGGTTACGATGTTCCCGTTGGGATCAACGTCGAGTTTTATCTTC 1280
||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1223 AGCCGACGACGGTCGCCGGTTACGATGTTCCCGTTGGGATTAACGTTGAGTTTTATCTTC 1282
Query 1281 CGGGTATAAATGAGGATCCGAAGCTTTGGTCTGATCCGAAGAAATTTAACCCTGATCGGT 1340
|||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1283 CGGGAATAAATGAGGATCCAAAGCTTTGGTCTGATCCGAAGAAATTTAACCCGGATCGGT 1342
Query 1341 TTATTTCGGGTAAGGAGGAAGCGGACATAACCGGCGTAACCGGAGTTAAAATGATGCCGT 1400
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1343 TTATTTCGGGTAAGGAGGAAGCGGACATAACCGGTGTAACCGGAGTTAAAATGATGCCGT 1402
Query 1401 TTGGTATTGGCCGTCGGATCTGTCCGGGGCTAGCGATGGCGACCGTACACGTGCACTTGA 1460
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1403 TCGGTATTGGCCGTCGGATCTGTCCGGGGCTAGCGATGGCGACCGTACACGTGCATTTGA 1462
Query 1461 TGCTAGCGAAGATGGTTCAACAGTTTGAGTGGAGCGCTTATCCGGCGGGAAGTGAAATTG 1520
|||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct 1463 TGCTAGCGAAGATGGTTCAAGAGTTTGAGTGGAGCGCTTATCCGCCGGAAAGTGAAATTG 1522
Query 1521 ATTTCGCGGGGAAATTGGAGTTTACGGTGGTAATGAAGAAACCGTTGAGAGCCATGGTTA 1580
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1523 ATTTCGCCGGGAAATTGGAGTTTACGGTGGTAATGAAGAAACCGTTGAGAGCCATGGTTA 1582
Query 1581 AACCAAGGGTCTAAATTTGTTTAATTATGAAAACGATGTGTGCTTATAT 1629
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1583 AGCCAAGGGTCTAAATTTGTTTAATTATGAAAACGATGTGTGCTTATAT 1631
Score = 93.5 bits (50), Expect = 6e-18
Identities = 54/56 (96%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 1629 TGAAATTTGTCGAGGGCTTTGTGAATTTCTAGTAAAAGATTTCATTTATTGTCAAA 1684
||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1655 TGAAATTTGTCAAGTGCTTTGTGAATTTCTAGTAAAAGATTTCATTTATTGTCAAA 1710
> AT5G04660.1 | Symbols: CYP77A4 | cytochrome P450, family 77,
subfamily A, polypeptide 4 | chr5:1335995-1337670 FORWARD LENGTH=1676
Length=1676
Score = 1160 bits (628), Expect = 0.0
Identities = 1180/1441 (82%), Gaps = 59/1441 (4%)
Strand=Plus/Plus
Query 179 CTTCCACCAGGTCCTCCGGGTTGGCCGGTGGTTGGAAACCTCTTCCAATTCGCGCGCTCC 238
||||| |||||||| || |||||||||||||| |||||| | ||||| |||||||||||
Sbjct 175 CTTCCTCCAGGTCCGCCAGGTTGGCCGGTGGTCGGAAACTTATTCCAGTTCGCGCGCTCA 234
Query 239 GGGAAGCAGTTTTACGAGTATGTTGATGATGT-AAGGAAAAAATACGGTCC--TATCTAC 295
|| || | ||||| ||| || | || ||| | || ||||| || || || | | |||
Sbjct 235 GGTAAACCGTTTTTCGAATACGCAGAGGATCTCAA-GAAAACGTATGGCCCGATTTTTAC 293
Query 296 ACGTTGAGGATGGGAAGTCGAACAATGATCATCATCTCTGATTCAGCTCTCGTCCACGAC 355
|| |||| ||||| | |||||||||||||||| |||| || || |||| ||||||||
Sbjct 294 AC--TGAGAATGGGGACTCGAACAATGATCATCCTCTCCGACGCAACTCTAGTCCACGAA 351
Query 356 G-TTCTGATTCAGCGTGGACCAATGTTCGCAACCCGACCCACCGAGAATCCTACCCGAAC 414
| || |||| || || ||| | | ||||| | |||||| |||||||||| ||||||||
Sbjct 352 GCTT-TGATCCAACGCGGAGCTCTCTTCGCTTCACGACCCGCCGAGAATCCGACCCGAAC 410
Query 415 TATCTTCAGCTCCAACACTTTCACCGTCAACGCTTC-AGCGTACGGACCCGTGTGGCGAT 473
|||||||||| ||||| |||||||||||||| | | ||||| || ||||||||||
Sbjct 411 AATCTTCAGCTGCAACAAATTCACCGTCAACGCCGCTA-AATACGGTCCAGTGTGGCGAT 469
Query 474 CCCTGAGAAAG-AACATGGTACAGAACATG-TTAAGCTCGATC-CGGT-TC-AGAGAATT 528
| ||||| ||| |||||||| ||||||||| || ||||| | | | || || || |||||
Sbjct 470 CTCTGAG-AAGAAACATGGTTCAGAACATGCTT-AGCTC-AACAC-GTCTCAAG-GAATT 524
Query 529 CGCGTCGTTGAGGCAATCCGCAATGGATAAACTCGTCGAGAGGATCAAATCAGAAGCTAA 588
|| | |||| |||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct 525 CGGGAAACTGAGACAATCCGCCATGGATAAACTCATCGAGAGGATCAAATCGGAAGCTAG 584
Query 589 AGACAACGACGGTCTTGTTTGGGTAC-TAAGAAACGCAAGATTCGCTGCGTTTTGTATTC 647
|||||||||||| || | ||||| | ||| |||||||||||||||||||||||||||||
Sbjct 585 AGACAACGACGGGCTAATCTGGGTTCTTAA-AAACGCAAGATTCGCTGCGTTTTGTATTC 643
Query 648 TTTTAGAGATGTGTTTTGGAATCGAAATGGATGAAGA-ATCGATTTTGAATATGGATCAA 706
| || || |||||||| |||||||| ||||||||||| | | || ||| |||||| |
Sbjct 644 TCTTGGAAATGTGTTTCGGAATCGAGATGGATGAAGAGA-CAATCGAGAAGATGGAT-GA 701
Query 707 G-TGATGAAGAAAGTTTTGATCACACTCAATCCAAGACTCGATGATTATCTCCCGATCCT 765
| | |||||| || || || || | ||||| || |||| |||||||| ||||| ||
Sbjct 702 GATTTTGAAGACGGTGTTAATGACTGTTGATCCACGAATCGACGATTATCTTCCGATTCT 761
Query 766 TGCTCCGTT-TTACTCCAAGGAGAGAGCAA-GAGCTCTCGAGGTTCGTCGTGAACAAGTT 823
||||||||| || ||| || ||||| | || |||||||||| ||||| |||||||||||
Sbjct 762 TGCTCCGTTCTT-CTCTAAAGAGAG-GAAACGAGCTCTCGAAGTTCGCCGTGAACAAGTC 819
Query 824 GATTTCATCGT-TAAATTCATCGAGAGACGACGGAGAGCGATTCAGAATCCGGGGA-CTG 881
|||| | |||| | || |||||||||||||||||||||||||||||||| ||| |||
Sbjct 820 GATTACGTCGTCGGAGTT-ATCGAGAGACGACGGAGAGCGATTCAGAATCC-AGGATCTG 877
Query 882 ATAAAACAGCGTCGTCTTTCTCTTACCTT-GATACACTCTTTGACCTT-AAAACCGAAGG 939
||||||| ||||||||||| || || ||| |||||||||||||| || |||| ||||||
Sbjct 878 ATAAAACGGCGTCGTCTTTTTCATA-CTTAGATACACTCTTTGA-TTTAAAAATCGAAGG 935
Query 940 TCGTAAAACGACGCCGTCTAATGAAGAGCTTGTGTCGCTTTGCTCGGAGTTTCTTAACGG 999
||||||||||||||||||||| |||||||| ||| |||| ||||| ||||||||||||||
Sbjct 936 TCGTAAAACGACGCCGTCTAACGAAGAGCTCGTGACGCTCTGCTCTGAGTTTCTTAACGG 995
Query 1000 GGGTACGGATACGACGGGGACGGCGATCGAGTGGGGTATCGCGCAGCTGATCGTGAATCC 1059
||||||||||||||||||||||||||||||||||| || ||||||||||| | ||||||
Sbjct 996 TGGTACGGATACGACGGGGACGGCGATCGAGTGGGGGATAGCGCAGCTGATTGCGAATCC 1055
Query 1060 TGAGATTCAATCTCGGCTCTACGATGAGATTAAATCAACGGTCGGAGAT---CGTGAGGT 1116
|||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||
Sbjct 1056 TGAGATTCAATCTCGGCTCTACGATGAGATTAAATCAACGGTGGGAGATGATCGT-AGGG 1114
Query 1117 T-GAGGAGAAAGATGTGGATAAAATGGTCTTTTTACAAGCCGTCGTTAAGGAGATTTTAC 1175
| || |||||||||||||| |||||||||||||||||||| | ||||||||| || | |
Sbjct 1115 TCGATGAGAAAGATGTGGACAAAATGGTCTTTTTACAAGCTTTTGTTAAGGAGCTTCTCC 1174
Query 1176 GGAAACATCCTCCGACGTACTTTACGT-TGACTCACT-CCGTGACGGAGCCGACGACGGT 1233
|||||||||| ||||| || ||| | | |||| || | |||| | |||| |||||||| |
Sbjct 1175 GGAAACATCCGCCGACTTATTTTTC-TCTGACGCA-TGCCGTTATGGAGACGACGACGCT 1232
Query 1234 CGGC-GGTTACGATGTTCCCGTTGG-GATCAACGTCGAGTTTTATCTTCCGGGTATAAAT 1291
| | ||||||||| |||||| || | | ||||||||| |||||||||||||||| | |
Sbjct 1233 TG-CTGGTTACGATATTCCCGCCGGCGTT-AACGTCGAGGTTTATCTTCCGGGTATTAGT 1290
Query 1292 GAGGATCCGA-AGCTTTGGTCTGATCCGAAGAAA-TTTAACCCTGATCGGTTTAT-TTCG 1348
|||||||||| | ||||| | | ||||| ||| ||| | || || |||||||| || |
Sbjct 1291 GAGGATCCGAGAA-TTTGGAATAACCCGAA-AAAGTTTGATCCGGACCGGTTTATGTT-G 1347
Query 1349 GGTAAGGAGGAAGCGGACATAACCGGCG-TAACCGGAGTTAAAATGATGCCGTTTGGTAT 1407
|||||||| || || ||||||||||| | | | ||||| |||||||| ||||||||| |
Sbjct 1348 GGTAAGGAAGATGCTGACATAACCGG-GATTAGTGGAGTAAAAATGATTCCGTTTGGTGT 1406
Query 1408 TGGCCGTCGGATCTGTCCGGGGCTAGCGATGGCGACCGTACACGTGCACTTGATGCTAGC 1467
|||||| |||||||||| || || || ||||| ||| ||||||| || |||||||| ||
Sbjct 1407 GGGCCGTAGGATCTGTCCAGGACTTGCAATGGCAACCATACACGTCCATTTGATGCTTGC 1466
Query 1468 GAAGATGGTTCAACAGTTTGAGTGGAGCGCTTATCCGGCGGGAAGTGAAATTGATTTCGC 1527
| ||||||||| |||| |||||| | ||| |||| | |||||||| |||||||||||
Sbjct 1467 GCGGATGGTTCAGGAGTTCGAGTGGTGTGCTCATCCACCAGGAAGTGAGATTGATTTCGC 1526
Query 1528 GGGGAAATTGGAGTTTACGGTGGTAATGAAGAAACCGTTGAGAGCCATGGTTAAACCAAG 1587
|| |||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||
Sbjct 1527 CGGAAAATTGGAGTTTACGGTGGTGATGAAGAATCCGTTGAGAGCTATGGTCAAACCAAG 1586
Query 1588 G 1588
|
Sbjct 1587 G 1587
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83232503610
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5