BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478447 Length=1373 Score E Sequences producing significant alignments: (Bits) Value AT3G11020.1 | Symbols: DREB2B, DREB2 | DRE/CRT-binding protein ... 1775 0.0 > AT3G11020.1 | Symbols: DREB2B, DREB2 | DRE/CRT-binding protein 2B | chr3:3455355-3457214 FORWARD LENGTH=1434 Length=1434 Score = 1775 bits (961), Expect = 0.0 Identities = 1276/1418 (90%), Gaps = 61/1418 (4%) Strand=Plus/Plus Query 1 GATTTCTGTAAAAAGTTTTTTGTCTTT--AGaaa-aaaa-aaaaaa-aGACGCTAGAAAG 55 |||||||||||||||||| |||||||| | ||| |||| |||||| ||||||||||||| Sbjct 1 GATTTCTGTAAAAAGTTTGTTGTCTTTACAAAAAGAAAAGAAAAAAGAGACGCTAGAAAG 60 Query 56 AACGCGAAAGCTCT-CGACGAAGATTTGATTTTGATCGATTTAACACGAACCA-AAACAA 113 |||||||||||| | ||| ||||||||| |||||||||| ||||||||||| | |||||| Sbjct 61 AACGCGAAAGCT-TGCGAAGAAGATTTGCTTTTGATCGACTTAACACGAACAACAAACAA 119 Query 114 CATCTGCGTGATAAAGAATAGATTTTTGCC-CATTAAAGAAGAGATTCGACTCTAATCCT 172 |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| Sbjct 120 CATCTGCGTGATAAAGAAGAGATTTTTGCCTAAATAAAGAAGAGATTCGACTCTAATCCT 179 Query 173 GGAGTTATCATTCACGATAGATTCTAAGATTGCGAC--TAAA-AAGAAGATGGCTGTATA 229 ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| Sbjct 180 GGAGTTATCATTCACGATAGATTCTTAGATTGCGACTATAAAGAAGAAGATGGCTGTATA 239 Query 230 TGAAAAAACTGGAACCGATACA-CCGAAGAAAAGGAAATCGAGGGCTCGAGCAGATGGTT 288 |||| |||| |||||||| || ||||||||||||||||| ||||||||||||| ||||| Sbjct 240 TGAACAAACCGGAACCGA-GCAGCCGAAGAAAAGGAAATCTAGGGCTCGAGCAGGTGGTT 298 Query 289 CAACGGTGGCTGATAGGTTAAAGAAGTGGAAAGAGTACAACGAGATTGTTGAAGCTTCGG 348 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 299 TAACGGTGGCTGATAGGCTAAAGAAGTGGAAAGAGTACAACGAGATTGTTGAAGCTTCGG 358 Query 349 CTATTAAAGATGGAGAGAAACCCAAACGCAAGGTTCCTGCGAAAGGGTCAAAGAAAGGTT 408 || ||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct 359 CTGTTAAAGAAGGAGAGAAACCGAAACGCAAAGTTCCTGCGAAAGGGTCGAAGAAAGGTT 418 Query 409 GTATGAAGGGTAAAGGAGGACCAGATAATTCTCACTGTAGTTTTAGAGGAGTTAGACAAA 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 419 GTATGAAGGGTAAAGGAGGACCAGATAATTCTCACTGTAGTTTTAGAGGAGTTAGACAAA 478 Query 469 GGATTTGGGGTAAATGGGTTGCAGAGATACGGGAACCGAATAGAGG-ACAAAGACTTTGG 527 |||||||||||||||||||||||||||| || |||||||| | ||| || ||||||||| Sbjct 479 GGATTTGGGGTAAATGGGTTGCAGAGATTCGAGAACCGAAAATAGGAAC-TAGACTTTGG 537 Query 528 CTTGGTACTTTTCCTACCGCGGAAGAAGCTGCTGCCGCTTATGATGAAGCCGCTAGGGTT 587 |||||||||||||||||||||||| |||||||| |||||||||||||||| |||| | | Sbjct 538 CTTGGTACTTTTCCTACCGCGGAAAAAGCTGCTTCCGCTTATGATGAAGCGGCTACCGCT 597 Query 588 ATGTACGGTCCATTGGCTCGTCTTAACTTCCCTCAGTCTGTTGTGTCTGAGTTTACTAGT 647 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 598 ATGTACGGTTCATTGGCTCGTCTTAACTTCCCTCAGTCTGTTGGGTCTGAGTTTACTAGT 657 Query 648 ACATCGAGTCAGTCTGAGGTGTGTACGGTTGAAAATAAGGCGGTTCTTCGTGGTGATGTT 707 || || ||||| ||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 658 ACGTCTAGTCAATCTGAGGTGTGTACGGTTGAAAATAAGGCGGTTGTTTGTGGTGATGTT 717 Query 708 TGTGTGAAGCATGAGGATACTGATTGTGAATCTAAACCATTTAGTCAGATTTTAGATGTT 767 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 718 TGTGTGAAGCATGAAGATACTGATTGTGAATCTAATCCATTTAGTCAGATTTTAGATGTT 777 Query 768 AGGGAAGAGTCTTGTGGAACCAGGCCGGACAGTTGCACGGTTGGACATCAAGATACGAAT 827 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 778 AGAGAAGAGTCTTGTGGAACCAGGCCGGACAGTTGCACGGTTGGACATCAAGATATGAAT 837 Query 828 TCTGT-GCTGAATTACGATTTGCTGTTAGAGTTTGAGCAGCAGTATTGGAGCGAAGCTTT 886 ||| | ||||||||||||||||||||||||||||||||||||||||||| || ||| ||| Sbjct 838 TCT-TCGCTGAATTACGATTTGCTGTTAGAGTTTGAGCAGCAGTATTGGGGCCAAGTTTT 896 Query 887 GCAGgagaaagagaaaccgaagcaggaagaagaagagatacagcaga-ag-aagagg--- 941 ||||||||||||||||||||||||||||||||| ||||||||||| | || || ||| Sbjct 897 GCAGGAGAAAGAGAAACCGAAGCAGGAAGAAGAGGAGATACAGCA-ACAGCAACAGGAAC 955 Query 942 ag-aTACAGCAACA--T-CAA-C--A---GC-AACAGCAGCA-A--CCGGAT----TTGC 983 || | ||||||||| | ||| | | || || | ||| | ||| | ||| Sbjct 956 AGCA-ACAGCAACAGCTGCAACCGGATTTGCTTACTGTTGCAGATTACGGTTGGCCTTGG 1014 Query 984 T-TACTG---TTGCAGATTAT--GA-TTCTTTGGGATCCTAATGAGTTCTTTGATATTCA 1036 | || || ||| | || || || ||| ||||||||||||||||| |||||||||| | Sbjct 1015 TCTAATGATATTGTAAATGATCAGACTTC-TTGGGATCCTAATGAGTGCTTTGATATTAA 1073 Query 1037 TGAACTCCTTGGAGACATGAATGAAGGCATGTTACCTGGTCCCGATCAGAGCCAGGACCC 1096 |||||||||||||| || || | ||| |||||||||| |||||||||| |||| Sbjct 1074 TGAACTCCTTGGAG--AT--TTG-A---ATG-AACCTGGTCCCCATCAGAGCCAAGACCA 1124 Query 1097 AAACCATGTAAATTCTGGTAGTTATGATCTGCATCCGCTTCATCTCGAGCCACACGATGG 1156 |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1125 AAACCACGTAAATTCTGGTAGTTATGATTTGCATCCGCTTCATCTCGAGCCACACGATGG 1184 Query 1157 TCACGAGTTCGATGGTTTGAGTACTCTGGATCTTTGAGAGTTCTGAGGCAATGGT-CTAC 1215 |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||| Sbjct 1185 TCACGAGTTCAATGGTTTGAGTTCTCTGGATATTTGAGAGTTCTGAGGCAATGGTCCTAC 1244 Query 1216 AATACTACAACATAATCTTCGGATTGATAATAGGAGAAACAAGAAATAGGTGTTAATGAT 1275 || |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 1245 AAGACTACAACATAATCTTTGGATTGATCATAGGAGAAACAAGAAATAGGTGTTAATGAT 1304 Query 1276 CTGATTCACAATGAAAAAATATTGAATAACTCTATAGTCTTTGTTCTTTCCTTGGATCAT 1335 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1305 CTGATTCACAATGAAAAAATATTTAATAACTCTATAGTTTTTGTTCTTTCCTTGGATCAT 1364 Query 1336 AAAGTGTTGATTCTCATCTATTGAGTTAATATAGAGAA 1373 || ||||| |||||||||||||||||||||||| ||| Sbjct 1365 GAACTGTTGCTTCTCATCTATTGAGTTAATATAGCGAA 1402 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67620134115 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5