BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg478521

Length=440
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G11750.1 | Symbols: FOLB1 | Dihydroneopterin aldolase | chr3...   664    0.0  


> AT3G11750.1 | Symbols: FOLB1 | Dihydroneopterin aldolase | chr3:3715071-3715904 
REVERSE LENGTH=441
Length=441

 Score =  664 bits (359),  Expect = 0.0
 Identities = 414/441 (94%), Gaps = 2/441 (0%)
 Strand=Plus/Plus

Query  1    ATGCATAGCTCACTGGAGACGACGGCTCCGGCGACGTTGGAGCGACGAGAGTC-AATGCT  59
            |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||
Sbjct  1    ATGCATAGCTCACTGGAGACCACGGCTCCGGCGACGTTGGAGCGACGAGAGTCAAAT-CT  59

Query  60   TGGGGACAAACTGGTACTAAAAGGGTTGAAATTTTACGGTTTCCATGGAGCGATTCCTGA  119
            ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct  60   TGGAGACAAACTGATACTAAAAGGGTTGAAATTTTACGGTTTCCATGGAGCGATTGCTGA  119

Query  120  AGAAAGGACACTGGGGCAGATGTTTCTTGTTGACATTGATGCGTGGGTGAGTCTGAAGAA  179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct  120  AGAAAGGACACTGGGGCAGATGTTTCTTGTTGACATTGATGCGTGGGTGAGTCTGAAAAA  179

Query  180  GGCCGGTGAATCAGACAACTTAGCAGATACAATCAGCTATGTCGACATTTTCAGCCTAGC  239
            ||| ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||
Sbjct  180  GGCTGGTGAATCAGACAACTTAGAAGATACAATTAGCTACGTCGACATTTTCAGCCTAGC  239

Query  240  TAAGGAAATTGTTGAAGGGTCACCAAGAAACCTTCTCGAGGCAGTCGCGGAACTCATCGC  299
            |||||||||||||||||||||||||||||||||| | ||| ||||||||||||| || ||
Sbjct  240  TAAGGAAATTGTTGAAGGGTCACCAAGAAACCTTTTGGAGACAGTCGCGGAACTTATTGC  299

Query  300  CTCCAAAACTCTTGAGAAATTCCCTCAGATAAACGCTGTTCGAGTGAAGCTCTCGAAGCC  359
             |||||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||
Sbjct  300  TTCCAAAACGCTTGAAAAATTCCATCAGATAAACGCTGTTCGAGTGAAGCTCTCAAAGCC  359

Query  360  AAATGTTGCACTTATTAAGAGCACCATTGATTACTTAGGGGTCGAGATTTTCAGACAGCG  419
            ||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct  360  AAATGTTGCACTTATTAAGAGCACCATTGATTATTTAGGGGTCGATATATTCAGACAGCG  419

Query  420  AAGCAGTAGTTCAAGGAACTG  440
            || || |||||||| ||||||
Sbjct  420  AAACACTAGTTCAAAGAACTG  440



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 20911383584


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5