BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478554
Length=3012
Score E
Sequences producing significant alignments: (Bits) Value
AT3G12020.2 | Symbols: | P-loop containing nucleoside triphosp... 3823 0.0
AT5G06670.1 | Symbols: | P-loop containing nucleoside triphosp... 996 0.0
> AT3G12020.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:3826148-3834318
FORWARD LENGTH=3598
Length=3598
Score = 3823 bits (2070), Expect = 0.0
Identities = 2164/2211 (98%), Gaps = 0/2211 (0%)
Strand=Plus/Plus
Query 1 ATGGCATCTAGACAAGGATCAAAGTCGAGAAAAGCAGGGTTAAAGGGTGCTGATTCTACT 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 292 ATGGCATCTAGACAAGGATCAAAATCGAGAAAAGCAGGGTTAAAGGGTGCTGATTCTACT 351
Query 61 GCATCTTCTACTACCTCGTCTTCGAAGCTTTATCAAGAGACATCTATCGATGGCCATAGC 120
|||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 352 GCATCTTCGACAACCTCGTCTTCGAAGCTTTATCAAGAGACTTCTATAGATGGCCATAGC 411
Query 121 TCCCCTGCTTCTTCATCTGCTCAAAGCAAGCATCAGTTCTTCTCACCAGATTCCTTACCA 180
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 412 TCCCCTGCTTCTTCATCTGCTCAAAGCAAGCAGCAGTTCTTCTCACCAGATCCCTTACCA 471
Query 181 CAAAGTGCTCAGCGGTCTAAAGAAAACGTCACAGTGACAGTTCGCTTTCGCCCACTCAGT 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 472 CAAACTGCTCAGCGGTCTAAAGAAAACGTCACAGTGACAGTTCGCTTTCGCCCACTCAGT 531
Query 241 CCAAGGGAAATTCGCCAAGGGGAGGAGGTTGCATGGTATGCAGATGGGGAAACAATCGTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 532 CCAAGGGAAATTCGCCAAGGGGAGGAGGTTGCATGGTATGCAGATGGGGAAACTATCGTG 591
Query 301 CGAAATGAGCATAATCCGACAATAGCTTATGCCTATGACCGAGTCTTTGGACCTACAACC 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 592 CGAAATGAGCATAATCCGACAATAGCTTATGCCTATGACCGTGTCTTTGGACCTACAACC 651
Query 361 ACAACACGCAATGTCTATGATATTGCTGCACACCATGTTGTTAATGGGGCTATGGAGGGG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 ACAACACGCAATGTCTATGATATTGCTGCACACCATGTTGTTAATGGGGCTATGGAGGGG 711
Query 421 GTAAATGGGACGATTTTTGCATATGGAGTGACAAGCAGTGGAAAGACACACACAATGCAT 480
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 712 ATAAATGGGACCATTTTCGCATATGGAGTGACAAGCAGTGGAAAGACACACACAATGCAT 771
Query 481 GGTGACCAGAGATCTCCTGGTATTATACCACTAGCAGTGAAAGATGCTTTCAGCATCACC 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 772 GGTGACCAGAGATCTCCTGGTATTATACCGTTAGCAGTGAAAGATGCTTTCAGCATCATC 831
Query 541 CAAGAGACTCCTAATCGAGAATTTCTTCTGCGTATTTCCTACATGGAAATATATAATGAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 832 CAAGAGACTCCTAATCGAGAATTTCTTCTGCGTATTTCCTACATGGAAATATATAATGAG 891
Query 601 GTTGTCAATGATTTGTTGAATCCAGCAGGACAAAATTTGAGGATCAGAGAAGACAAGCAG 660
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 892 GTTGTCAATGATTTGTTGAATCCAGCAGGACACAATTTGAGGATCAGAGAAGACAAGCAG 951
Query 661 GGAACCTTTGTCGAAGGGATTAAAGAAGAAGTTGTTTTATCCCCTGCTCATGCGCTTTCT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 GGAACCTTTGTCGAAGGGATTAAAGAAGAAGTTGTTTTATCCCCTGCTCATGCGCTTTCT 1011
Query 721 CTTATCGCAGCTGGAGAAGAGCAACGACATGTTGGATCTACAAATTTTAATTTGCTCAGC 780
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1012 CTTATTGCAGCTGGAGAAGAGCAACGACATGTTGGATCCACAAATTTTAATTTGCTCAGC 1071
Query 781 AGCCGGAGCCATACAATATTTACGTTGACGATAGAAAGTAGTCCCTTAGGCGACAAGAGT 840
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1072 AGCCGGAGCCATACAATATTTACGTTGACGATAGAAAGTAGTCCCTTAGGTGACAAGAGT 1131
Query 841 AAAGGTGAAGCTGTACACCTCTCACAACTGAACCTCGTTGATCTGGCAGGTTCCGAGAGT 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 AAAGGTGAAGCTGTACACCTCTCACAACTGAACCTCGTTGATCTGGCAGGTTCCGAGAGT 1191
Query 901 TCAAAGGTTGAAACTAGTGGTGTAAGACGCAAAGAAGGATCATATATAAATAAAAGTTTG 960
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 TCAAAGGTTGAAACCAGTGGTGTAAGACGCAAAGAAGGATCATATATAAATAAAAGTTTG 1251
Query 961 CTGACGTTAGGGACTGTGATATCAAAGCTTACGGATGTGAGGGCTTCACATGTACCATAC 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 CTGACGTTAGGGACTGTGATATCAAAGCTTACGGATGTGAGGGCTTCACATGTACCATAC 1311
Query 1021 AGAGACTCTAAGTTAACAAGGATCCTTCAATCCTCATTGAGTGGTCATGACCGAGTATCT 1080
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1312 AGAGACTCTAAGTTAACCAGGATCCTTCAGTCCTCATTGAGTGGTCATGACCGAGTATCT 1371
Query 1081 CTCATTTGTACAGTCACTCCTGCATCAAGCAGTTCAGAAGAAACACACAACACATTGAAA 1140
||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||||
Sbjct 1372 CTCATTTGTACCGTCACTCCTGCATCAAGCAGTTCGGAAGAAACACACAATACACTGAAA 1431
Query 1141 TTTGCTCATCGTGCAAAGCATATTGAGATTCAAGCTGAACAAAACAAGATAATTGATGAG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432 TTTGCTCATCGTGCAAAGCATATTGAGATTCAAGCTGAACAAAACAAGATAATTGATGAG 1491
Query 1201 AAATCATTAATCAAGAAGTACCAACATGAGATTCGTCAACTGAAGGAAGAGTTGGAACAC 1260
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1492 AAATCATTAATCAAGAAGTACCAACGCGAGATTCGTCAACTGAAGGAAGAGTTGGAACAG 1551
Query 1261 CTTAAACAGGAAATTGTACCAGTTCCTCAGCTGAAGGATATTGGTGCAGATGATATTGTT 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 CTTAAACAGGAAATTGTACCAGTTCCTCAGCTGAAGGATATTGGTGCAGATGATATTGTT 1611
Query 1321 CTCCTGAAGCAGAAGCTAGAAGATGGTCAAGTCAAGCTGCAATCCAGACTCGAAGAGGAG 1380
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1612 CTTCTGAAGCAGAAGCTAGAAGATGGTCAAGTCAAGCTGCAATCTAGACTCGAAGAAGAG 1671
Query 1381 GAAGAAGCTAAAGCAGCTCTCTTGAGTCGAATCCAACGATTGACGAAATTAATTTTGGTG 1440
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1672 GAAGAAGCTAAAGCAGCTCTCCTGAGTCGAATCCAAAGATTGACGAAATTAATTTTGGTG 1731
Query 1441 TCGACTAAAAATCCCCAAGCATCTCGATTACCTCATCGTTTTAATCCTCGGAGGAGACAT 1500
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1732 TCGACTAAAAATCCACAAGCATCTCGATTACCTCATCGTTTTAATCCGCGGAGGAGACAT 1791
Query 1501 TCATTTGGGGAAGAAGAGCTTGCTTACCTACCATACAAGAGGCGGGACATGATGGACGAT 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1792 TCATTTGGGGAAGAAGAGCTTGCTTACCTACCATACAAGAGGCGGGACATGATGGACGAT 1851
Query 1561 GAGCAACTTGACCTGTATGTTTCTGTGGAGGGAAATCATGAGATTAGAGATAATGCGTAT 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1852 GAGCAACTTGACCTGTATGTTTCTGTGGAGGGAAATCATGAGATTAGAGATAATGCGTAT 1911
Query 1621 AGAGAAGaaaaaaaGACCCGGAAGCACGGATTGTTAAATTGGTTAAAGCCTAAGAAAAGA 1680
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1912 AGAGAAGAAAAAAAGACCCGCAAGCACGGATTGTTAAATTGGTTAAAGCCTAAGAAAAGA 1971
Query 1681 GATCACAGTTCAAGTGCCAGCGACCAGTCAAGTGTGGTCAAATCTAACAGCACACCATCA 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1972 GATCACAGTTCAAGTGCCAGCGACCAGTCAAGTGTGGTCAAATCTAACAGCACACCATCA 2031
Query 1741 ACTCCTCAAGGGGGAGGCAGTCATCTGCACACAGAATCAAGACTTTCAGAAGGCTCGCCT 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2032 ACTCCTCAAGGGGGAGGCAGTCATCTGCACACAGAATCAAGACTTTCAGAAGGCTCGCCT 2091
Query 1801 TTGATGGAACAACTCTCAGAGCCTAGGGAAGACAGAGAAGCTTTAGAAGACAGTTCCCAT 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2092 TTGATGGAACAACTCTCAGAGCCTAGGGAAGACAGAGAAGCTTTAGAAGACAGTTCCCAT 2151
Query 1861 GAAATGGAGATTCCGGAGACTAGCAATAAAATGAGCGATGAGTTGGATCTCTTGAGGGAA 1920
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2152 GAAATGGAGATTCCGGAGACTAGCAATAAAATGAGCGATGAGTTGGATCTTTTGAGGGAA 2211
Query 1921 CAGAAAAAGATTTTATCTGAAGAGGCGGCACTGCAATTAAGTTCTTTAAAACGGTTGTCA 1980
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2212 CAGAAAAAGATATTATCTGAAGAGGCGGCACTGCAATTAAGTTCTTTAAAACGGATGTCA 2271
Query 1981 GATGAAGCTACAAAGTCCCCTCAAAATGAGGAGATTAAAGGGGAAATTAAAGTACTCAAT 2040
||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 2272 GATGAAGCTGCAAAGTCCCCTCAAAATGAGGAGATTAATGAGGAAATTAAAGTACTCAAT 2331
Query 2041 GACGACATCAAAGCAAAGAATGACCAGATTGCTACGTTGGAGAAACAAATATTGGATTTT 2100
||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct 2332 GACGACATCAAAGCAAAGAATGACCAGATTGCTACGTTGGAGAGACAGATAATGGATTTT 2391
Query 2101 GTTATGACATCTCATGAGGCATTGGATAAATCTGATATCATGCAGGCAGTTGCTGAGCTG 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2392 GTTATGACATCTCATGAGGCATTGGATAAATCTGATATCATGCAGGCAGTTGCTGAGCTG 2451
Query 2161 AGGGATCAACTTAATGAGAAATCTTTTGAACTCGAGGTGATCGAATTGTTT 2211
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2452 AGGGATCAACTTAATGAGAAATCTTTTGAACTCGAGGTGATCGAATTGTTT 2502
Score = 1201 bits (650), Expect = 0.0
Identities = 761/813 (94%), Gaps = 14/813 (2%)
Strand=Plus/Plus
Query 2213 TTTGCTTCTGTGTATATTATATAATACCAGTCTTCAAAACGCCAAAC--TA-T-AC--T- 2265
||| ||||||||||||||||| ||||||||| |||||||||||| || || | || |
Sbjct 2615 TTT-CTTCTGTGTATATTATAAAATACCAGTATTCAAAACGCCAGACTATATTAACAATG 2673
Query 2266 AA-C-AAT-G-AAG--CTACGCGGTTTTCTTATTCTTCATCGTGTTTACAGGTTAAAGCT 2319
|| | ||| | | | |||||| |||||| |||||||||| ||||||||||||||||||
Sbjct 2674 AAGCTAATGGTATGCTCTACGCTTTTTTCTCATTCTTCATCTTGTTTACAGGTTAAAGCT 2733
Query 2320 GCAGATAATCGCATCATTCAGGAAACACTCAATCAAAAGACATGTGAATGTGAAGTGTTG 2379
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 2734 GCAGATAATCGCATCATTCAGCAAACACTCAATGAAAAGACATGTGAATGTGAAGTGTTG 2793
Query 2380 CAAGAAGAAGTTGCAAATCTGAAGCAGCAGCTCTCCGATGCCCTGGAACTAGCACAGGGA 2439
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct 2794 CAAGAAGAAGTTGCAAATCTAAAGCAGCAGCTCTCTGAGGCCCTGGAACTAGCACAGGGA 2853
Query 2440 ACTAAGATTGAAGAGCTGAAACAAAAAGCCAAGGAACTAAGTGAATCAAAGGAGCAATTA 2499
||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| |||
Sbjct 2854 ACTAAGATTAAAGAGCTGAAACAAGACGCCAAGGAACTAAGTGAATCAAAGGAGCAGTTA 2913
Query 2500 GAACTCAGAAACAGGAAACTCGCAGAAGAGAGTTCATATGCAAAAGGTCTTGCATCGGCA 2559
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 2914 GAACTCAGAAACAGGAAACTTGCAGAAGAGAGTTCATATGCAAAAGGTCTTGCATCAGCA 2973
Query 2560 GCTGCAGTTGAGCTTAAGGCATTATCCGAAGAAGTTGCAAAGCTTATGTATCAAAACGAG 2619
|||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 2974 GCTGCAGTTGAGCTCAAGGCATTATCCGAAGAAGTTGCAAAGCTTATGAATCAGAACGAG 3033
Query 2620 AGACTAGCAGCTGAGCTGGCAACACAAAAGAGCCCGGTCGCACAACGAAATAAGACAGGA 2679
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 3034 AGACTAGCAGCTGAGCTGGCAACACAGAAGAGCCCAATCGCACAACGAAATAAGACAGGA 3093
Query 2680 ACAACAACAAATGTAAGGAACAATGGAAGAAGAGAGAGTCTTGCAAAGAGGCAAGAACAT 2739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3094 ACAACAACAAATGTAAGGAACAATGGAAGAAGAGAGAGTCTTGCAAAGAGGCAAGAACAT 3153
Query 2740 GACAGCCCCTCAATGGAGCTGAAGAGAGAAGTGAGGTTGAGTAAGGAACGTGAGCTATCG 2799
|||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 3154 GACAGCCCATCAATGGAGCTGAAGAGAGAACTGAGGATGAGTAAGGAACGTGAGCTATCG 3213
Query 2800 TATGAAGCTGCACTAGTTGAAAAAGATCAAAGAGAAGCTGAGCTTGAAAGGATATTAGAA 2859
|||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3214 TATGAAGCTGCACTTGGTGAAAAAGAACAAAGAGAAGCTGAGCTTGAAAGGATATTAGAA 3273
Query 2860 GAAACGAAACAGAGAGAAGCATATCTGGAGAATGAGCTAGCTAATATGTGGGTTCTTGTT 2919
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3274 GAAACAAAACAGAGAGAAGCATATCTGGAGAATGAGCTTGCTAATATGTGGGTTCTTGTT 3333
Query 2920 TCTAAGTTGAGAAGATCTCAAGGAGCTGATTCTGAAATCTCTGATTCTATATCAGAGACA 2979
|||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 3334 TCTAAGCTGAGAAGATCTCAAGGAGCAGATTCAGAAATCTCTGATTCTATATCAGAGACG 3393
Query 2980 CGACAAACGGAACAAACGGAAGGATCATTTTGA 3012
||||||||||||||||||||||| |||||||||
Sbjct 3394 CGACAAACGGAACAAACGGAAGGTTCATTTTGA 3426
> AT5G06670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2048243-2055019
REVERSE LENGTH=2961
Length=2961
Score = 996 bits (539), Expect = 0.0
Identities = 803/930 (86%), Gaps = 20/930 (2%)
Strand=Plus/Plus
Query 427 GGGACGATTTTTGCATATGGAGTGACAAGCAGT-GGAAAGACACACACAATGCATGGTG- 484
||||| ||||| ||||||||||||||||||||| ||||| || || ||||||||||| |
Sbjct 445 GGGACCATTTTCGCATATGGAGTGACAAGCAGTGGGAAA-ACTCATACAATGCATGG-GA 502
Query 485 ACCAGAGATCTCCTGGTATTATACCACTAGCAGTGAAAGATGCTTTCAGCATCACCCAAG 544
|||| |||||||||||||| |||||| |||| |||||||||||||||||||| | ||||
Sbjct 503 ACCAAAGATCTCCTGGTATAATACCATTAGCCGTGAAAGATGCTTTCAGCATTATACAAG 562
Query 545 AGACTCCTAA-TCGAGAATTTCTTCTGCGTATTTCCTACATGGAAATATATAATGAGGTT 603
|||| || || ||||||||||| || ||| |||||||| | ||||| ||||| ||||||
Sbjct 563 AGACACC-AAGGCGAGAATTTCTCCTACGTGTTTCCTACTTTGAAATTTATAACGAGGTT 621
Query 604 GTCAATGATTTGTTGAATCCAGCAGGACAAAATTTGAGGATCAGAGAAGACAAGCAGGGA 663
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 622 GTCAATGATTTGTTGAATCCAGCAGGACAAAATTTGAGGATCAGAGAAGATGAGCAGGGA 681
Query 664 ACCTTTGTCGAAGGGATTAAAGAAGAAGTTGTTTTATCCCCTGCTCATGCGCTTTCTCTT 723
|||| | | ||||||||||||||||| |||||| | ||||||||||||| |||||||||
Sbjct 682 ACCTATATTGAAGGGATTAAAGAAGAGGTTGTTCTGTCCCCTGCTCATGTGCTTTCTCTC 741
Query 724 ATCGCAGCTGGAGAAGAGCAACGACATGTTGGATCTACAAATTTTAATTTGCTCAGCAGC 783
|| ||||||||||||||||| |||||| ||||||| |||| |||||||||||||||||||
Sbjct 742 ATAGCAGCTGGAGAAGAGCACCGACATATTGGATCCACAAGTTTTAATTTGCTCAGCAGC 801
Query 784 CGGAGCCATACAATATTTACGTTGACGATAGAAAGTAGTCCCTTAGGCGACAAGAGTAAA 843
|| ||||||||||| ||||| |||| ||||| ||||||||||| || ||||| | | ||
Sbjct 802 CGAAGCCATACAATGTTTACCCTGACTATAGAGAGTAGTCCCTTGGGTGACAATAATGAA 861
Query 844 GGTGAAGCTGTACACCTCTCACAACTGAACCTCGTTGATCTGGCAGGTTCCGAGAGTTCA 903
|||| ||| ||||||||||| || ||||||||| |||| ||||||||||| ||||| |||
Sbjct 862 GGTGGAGCAGTACACCTCTCGCAGCTGAACCTCATTGACCTGGCAGGTTCTGAGAGCTCA 921
Query 904 AAGGTTGAAACTAGTGGTGTAAGACGCAAAGAAGGATCATATATAAATAAAAGTTTGCTG 963
|| | |||||| || ||| |||| ||||| ||||| || ||||||||||||||||||||
Sbjct 922 AAAGCTGAAACCAGCGGTTTAAGGCGCAAGGAAGGGTCTTATATAAATAAAAGTTTGCTA 981
Query 964 ACGTTAGGGACTGTGATATCAAAGCTTACGGATGTGA-GGGCTTCACATGTACCATACAG 1022
|| |||||||| || |||||||||||||| ||| || ||||| ||||||||||| ||
Sbjct 982 ACTTTAGGGACCGTAATATCAAAGCTTACAGATA-GAAGGGCTAGTCATGTACCATATAG 1040
Query 1023 AGACTCTAAGTTAACAAGGA-TCCTTCAATCCTCATTGAGTGGTCATG-ACCGAGTATCT 1080
|||||||| ||||| || | | ||| | |||||| |||||||||||| || | ||||||
Sbjct 1041 GGACTCTAAATTAACCAG-ACTGCTTGAGTCCTCACTGAGTGGTCATGGAC-GTGTATCT 1098
Query 1081 CTCATTTGTACAGTCACTCCTGCATCAAGCAGTTCAGAAGAAACACACAACACATTGAAA 1140
||||| |||||||| || ||||||||||||| || |||||||||||||||||||||||
Sbjct 1099 CTCATATGTACAGTGACACCTGCATCAAGCAACTCTGAAGAAACACACAACACATTGAAG 1158
Query 1141 TTTGCTCATCGTGCAAAGCATATTGAGATTCAAGCTGAACAAAACAAGATAATTGATGAG 1200
||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||
Sbjct 1159 TTTGCTCATCGTGCAAAGCATATTGAGATTCAAGCCGCACAGAACAAGATAATTGATGAG 1218
Query 1201 AAATCATTAATCAAGAAGTACCAACATGAGATTCGTCAACTGAAGGAAGAGTTGGAACAC 1260
|||||||| ||||||||||||||| | |||||||| ||||| ||||| ||| |||||||
Sbjct 1219 AAATCATTGATCAAGAAGTACCAATACGAGATTCGCCAACTCAAGGAGGAGCTGGAACAG 1278
Query 1261 CTTAAACA-GGAAATTGTACCAGTTCCTCAGCTGAAGGATATTGGTGCAGATGATAT--- 1316
|||||||| |||| || ||||||| ||||||| |||||||| ||| |||||||||
Sbjct 1279 CTTAAACAAGGAA-TTAAACCAGTTTCTCAGCTAAAGGATATCAGTGGAGATGATATCGA 1337
Query 1317 --T-GTTCTCCTGAAGCAGAAGCTAGAAGA 1343
| ||||||||||||||||| ||||||||
Sbjct 1338 CATTGTTCTCCTGAAGCAGAAACTAGAAGA 1367
Score = 584 bits (316), Expect = 1e-165
Identities = 682/855 (80%), Gaps = 39/855 (5%)
Strand=Plus/Plus
Query 1368 ACTCGAAGAGGAGGAAGAAGCTAAAGCAGCTCTCTTGAGTCGAATCCAACGATTGACGAA 1427
||| ||||| |||||||| |||||||||||||||||||||||||||||| | |||| ||
Sbjct 1359 ACTAGAAGAAGAGGAAGATGCTAAAGCAGCTCTCTTGAGTCGAATCCAAAGGCTGACAAA 1418
Query 1428 ATTAATTTTGGTGTCGACTAAAAATCCCCAAGCATCTCGATTACCTCATCGTTTTAATCC 1487
| ||||| | ||||| | ||||| ||| ||| |||| || || || ||||| | ||||
Sbjct 1419 ACTAATTCTCGTGTCTAATAAAACTCCACAAACATCGCGGTTTTCTTATCGTGCTGATCC 1478
Query 1488 TCGGAGGAGACATTCATTTGGGGAAGAAGAGCTTGCTTACCTACCATACAAGAGGCGGGA 1547
|||||||||||| ||||| || ||||| ||||||||||||||||| | |||||||| ||
Sbjct 1479 TCGGAGGAGACACTCATTCGGAGAAGAGGAGCTTGCTTACCTACCGCATAAGAGGCGCGA 1538
Query 1548 CATGATGGACGATGAGCAAC-TTGACCTGTATGTTTCT-GTGGAGGGAAATCATGAGATT 1605
| ||| || |||||| ||| |||| ||||||||||| ||| ||||| || |||||||
Sbjct 1539 CTTGACAGATGATGAG-AACCTTGAATTGTATGTTTCTCGTGAAGGGAC-TCCTGAGATT 1596
Query 1606 AGAGATAATGCGTATAGAGAAGaaaaaaaGACCCGGAAGCACGGATTGTTAAATTGGTT- 1664
| |||| |||||| || ||||||||| ||||| ||||||| || | | || |||||
Sbjct 1597 ATAGATGATGCGTTTATAGAAGAAAAGAAGACAAGGAAGCATGGCCTACTGAACTGGTTG 1656
Query 1665 AAAGCCTAAGAAAAGAGATCA-CAGTTCAAG----T---GCC--AGCGACCAGTCAAGTG 1714
||| |||||||| ||| || ||||| | | ||| || ||| |||| ||||
Sbjct 1657 AAAAT-TAAGAAAAAAGA-CAGCAGTTTGGGGGGATCAAGCCTCAGTGACAAGTCGAGTG 1714
Query 1715 TGGTCAAATCTAACAGCACACCATCAACTCCTCAAGGGGGAGGCAGTCATCTGCACACAG 1774
||||| || ||||| ||||| |||||||||||||| | ||||||| || | || ||||
Sbjct 1715 CAGTCAAGTCCAACAGTACACCGTCAACTCCTCAAGGAGAAGGCAGTGATTTTCATACAG 1774
Query 1775 AATCAAGACTTTCAGAAGGCTC-GCCTTTG-ATGGAACAACTC-TCAGAGCCTAGGGAAG 1831
|||| ||||||||||||||||| || || | | | | ||| | | |||| ||| ||| |
Sbjct 1775 AATCTAGACTTTCAGAAGGCTCCGCATTGGCA-G-ATCAAATTAT-AGAGACTATGGA-G 1830
Query 1832 AC-AGAGAAGCTT-TAGAAGACAGTTCCCATGAAATGGAGATTCCGGAGACTAGCAATAA 1889
| ||||||||| | |||||||||| ||||| || |||| || |||||||| |||||
Sbjct 1831 AATAGAGAAGCTCAT-GAAGACAGTTTTCATGAGATTGAGACACCTGAGACTAG-AATAA 1888
Query 1890 AA-TGAGCGATGAGTTGGATCT-CTTGAGGGAACAGAAAAAGATTTTATCTGAAGAGGCG 1947
|| ||| ||| || |||| | || |||||||||| |||||| |||||| || ||| |
Sbjct 1889 AAATGATCGACCAGATGGAAATACT-GAGGGAACAGCAAAAGACTTTATCAGAGGAGATG 1947
Query 1948 GCACTGCAATTAAGTTCTTTAAAACGGTTGTCAGATGAAGCTAC-AAAGTCCCCTCAAAA 2006
|||| |||| ||| ||||| |||| ||||||||| || ||| | |||| ||||||||||
Sbjct 1948 GCACAACAATCAAGGTCTTTTAAACTGTTGTCAGAAGAGGCTGCCAAAG-CCCCTCAAAA 2006
Query 2007 TGAGGAGATTAAAGGGGAAATTA-AAGTAC-TCAATGACGACATCAAAGCAAAGAATGAC 2064
||| || ||||||| || |||| || || |||||| ||||||||| |||||||| |||
Sbjct 2007 TGAAGAAATTAAAGCAGAGATTATAA--ACCTCAATGGCGACATCAAGGCAAAGAACGAC 2064
Query 2065 CAGATTGCTACGTTGGAGAAACAAATATTGGATTTTGTTAT-GACATCTCATGAGGCATT 2123
|||||||||||||||| |||||||||| ||||||||||||| | |||| ||||| | |||
Sbjct 2065 CAGATTGCTACGTTGGGGAAACAAATACTGGATTTTGTTATAG-CATCACATGATGAATT 2123
Query 2124 GGATAAATCTGATATCATGCAGGCAGTTGCTGAGCTGAGGGATCAACTTAATGAGAAATC 2183
|||||||||||||||| ||||||| ||| |||| |||||| |||||| ||||||||||
Sbjct 2124 GGATAAATCTGATATCGTGCAGGCTGTTTCTGAAATGAGGGCTCAACTAAATGAGAAATG 2183
Query 2184 TTTTGAACTCGAGGT 2198
|||||||||||||||
Sbjct 2184 TTTTGAACTCGAGGT 2198
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149748324855
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5