BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478567
Length=1328
Score E
Sequences producing significant alignments: (Bits) Value
AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3857843-3859798 ... 2135 0.0
AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-157... 1153 0.0
AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837 ... 1022 0.0
AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-1713021... 1000 0.0
AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:... 985 0.0
AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313 ... 937 0.0
> AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3857843-3859798
FORWARD LENGTH=1434
Length=1434
Score = 2135 bits (1156), Expect = 0.0
Identities = 1251/1297 (96%), Gaps = 6/1297 (0%)
Strand=Plus/Plus
Query 35 CACCCTCCAGGTTTCCTCAGAGAT--CC-CTCGAATCATTTTGAAGGATATAGAAAATGG 91
|||||||| |||||||||||||| || ||| || | || | |||||||||||||||||
Sbjct 59 CACCCTCCTCGTTTCCTCAGAGATCCCCTCTCTAA-C-TTCT-AAGGATATAGAAAATGG 115
Query 92 CAGACGGTGAAGACATTCAGCCTCTTGTCTGTGACAATGGAACCGGAATGGTTAAGGCTG 151
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 116 CAGATGGTGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGGTTAAGGCTG 175
Query 152 GATTTGCCGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATTGTTGGTCGTCCTCGTC 211
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 176 GATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTCCTCGAC 235
Query 212 ACACTGGTGTGATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAGGCTCAGT 271
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 ACACTGGTGTCATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAGGCTCAGT 295
Query 272 CTAAGAGAGGTATTTTAACATTGAAATATCCTATTGAGCATGGTATTGTTAGCAACTGGG 331
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 CTAAGAGAGGTATTTTGACATTGAAATATCCTATTGAGCATGGTATTGTTAGCAACTGGG 355
Query 332 ATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGTGGCACCTGAGG 391
|||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 356 ATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCACCTGAAG 415
Query 392 AGCACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCTAATCGTGAGAAAATGA 451
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 416 AACACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCCAATCGTGAGAAAATGA 475
Query 452 CACAGATTATGTTTGAAACTTTCAACACTCCTGCTATGTATGTCGCTATCCAAGCTGTTC 511
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 476 CTCAGATTATGTTTGAAACTTTCAACACTCCTGCCATGTATGTCGCTATCCAAGCTGTTC 535
Query 512 TTTCCCTCTACGCCAGTGGTCGTACTACTGGTATTGTGCTCGACTCTGGAGATGGTGTGA 571
||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 536 TTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTGTTGGACTCTGGAGATGGTGTGA 595
Query 572 GTCACACTGTTCCAATTTACGAAGGATATGCTCTTCCACACGCCATTCTGCGTTTGGACC 631
||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct 596 GTCACACTGTTCCAATTTATGAAGGATATGCTCTTCCACATGCTATTCTGCGTTTGGACC 655
Query 632 TTGCAGGACGTGACCTTACTGATTACCTCATGAAGATCTTAACAGAGCGTGGTTACTCAT 691
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 656 TTGCAGGCCGTGACCTTACTGATTACCTCATGAAGATCTTAACCGAGCGTGGTTACTCAT 715
Query 692 TCACTACCTCAGCAGAGCGTGAAATTGTAAGGGATGTGAAAGAGAAACTTTCTTACATAG 751
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 716 TCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAGAGAAACTTGCTTACATAG 775
Query 752 CTCTTGACTACGAGCAAGAGATGGACACGGCAAACACAAGCTCATCCGTTGAGAAGAGTT 811
| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct 776 CACTTGACTACGAGCAAGAGATGGAAACAGCAAACACAAGCTCATCCGTTGAGAAGAGCT 835
Query 812 ACGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATTCCGCTGCCCCGAGG 871
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 836 ATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATTCCGCTGCCCGGAGG 895
Query 872 TTCTGTTCCAACCATCTTTGGTGGGAATGGAAGCTGCTGGTATTCATGAGACCACTTACA 931
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 896 TTCTGTTCCAACCGTCTTTGGTGGGAATGGAAGCTGCTGGTATTCACGAGACCACTTACA 955
Query 932 ATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTATGGAAACATTGTGCTCA 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 956 ATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTATGGAAACATTGTGCTCA 1015
Query 992 GTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAGCAAAGAGATCACTGCTT 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 GTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAGCAAAGAGATCACTGCTT 1075
Query 1052 TGGCTCCAAGCAGCATGAAGATTAAGGTTGTTGCTCCACCAGAGAGGAAGTACAGTGTCT 1111
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1076 TGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAGAGGAAGTACAGTGTCT 1135
Query 1112 GGATTGGAGGCTCCATTCTAGCATCACTCAGTACCTTCCAACAGATGTGGATAGCAAAGG 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 GGATTGGAGGCTCCATTCTAGCATCACTCAGTACCTTCCAACAGATGTGGATAGCAAAGG 1195
Query 1172 CTGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAGTGCTTCTAAGATTAAGCTC 1231
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 CCGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAGTGCTTCTAAGATTAAGCTC 1255
Query 1232 GAATCAAAGTGATGAATGATTGTTCTGTATTGGTAAAGCCTTTTGTTCATCGACTTTGTT 1291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 AAATCAAAGTGATGAATGATTGTTCTGTATTGGTAAAGCCTTTTGTTCATCGACTTTGTT 1315
Query 1292 GCAAAATATTCTTTTGTTTTCTATGTTTCTTCACCAC 1328
|||||||||||||||||||||||||||||||||||||
Sbjct 1316 GCAAAATATTCTTTTGTTTTCTATGTTTCTTCACCAC 1352
Score = 63.9 bits (34), Expect = 4e-09
Identities = 34/34 (100%), Gaps = 0/34 (0%)
Strand=Plus/Plus
Query 1 TTCTCTTCTTCATTCGCTCCGTTTCTCTCTCAAA 34
||||||||||||||||||||||||||||||||||
Sbjct 1 TTCTCTTCTTCATTCGCTCCGTTTCTCTCTCAAA 34
> AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-15781561
FORWARD LENGTH=1618
Length=1618
Score = 1153 bits (624), Expect = 0.0
Identities = 978/1149 (85%), Gaps = 24/1149 (2%)
Strand=Plus/Plus
Query 83 AGAAAATGGCAGACGGTGAAGACATTCAGCCTCTTGTCTGTGACAATGGAACCGGAATGG 142
|||||||||| || |||||||||||||| |||||||| || ||||||||||| |||||||
Sbjct 160 AGAAAATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGG 219
Query 143 TTAAGGCTGGATTTGCCGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATTGTTGGTC 202
|||||||||| ||||| || ||||||||||| |||||||| || ||||| ||||| ||||
Sbjct 220 TTAAGGCTGGTTTTGCTGGGGATGATGCACCTAGAGCTGTGTTTCCTAGTATTGTGGGTC 279
Query 203 GTCCTCGTCACACTGGTGTGATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATG 262
||||||||||||| |||||||||||||| ||||| ||||| |||||||| ||||| ||||
Sbjct 280 GTCCTCGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATG 339
Query 263 AGGCTCAGTCTAAGA-GAGGTATTTTAACAT-TGAAATATCCTATTGAGCATGGTATTGT 320
| ||||| || || | ||||||||||||| | | || || |||||||||||||| |||||
Sbjct 340 AAGCTCAATCCAA-ACGAGGTATTTTAAC-TCTCAAGTACCCTATTGAGCATGGAATTGT 397
Query 321 TAGCAACTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGT 380
| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 398 CAACAATTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGT 457
Query 381 GGCACCTGAGGAGCACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCTAATCG 440
|| |||||||| || ||| |||| || || ||||| || || ||||| || ||||||||
Sbjct 458 TGCTCCTGAGGAACATCCTATTCTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCG 517
Query 441 TGAGAAAATGACACAGATTATGTTTGAAACTTTCAACACTCCTGCTATGTATGTCGCTAT 500
|||||| ||||| || || |||||||| |||||||| | |||||||||||||| |||||
Sbjct 518 TGAGAAGATGACTCAAATCATGTTTGAGACTTTCAATGCCCCTGCTATGTATGTGGCTAT 577
Query 501 CCAAGCTGTTCTTTCCCTCTACGCCAGTGGTCGTACTACTGGTATTGTGCTCGACTCTGG 560
|| ||||||||||| || || ||||||||||||||||| ||||||||||||||||||||
Sbjct 578 TCAGGCTGTTCTTTCTCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTCGACTCTGG 637
Query 561 AGATGGTGTGAGTCACACTGTTCCAATTTACGAAGGATATGCTCTTCCACACGCCATTCT 620
|||||||||||| ||||||||||| || || || || ||||| |||||||| || || ||
Sbjct 638 AGATGGTGTGAGCCACACTGTTCCTATCTATGAGGGGTATGCACTTCCACATGCTATCCT 697
Query 621 GCGT-TTGGACCTTGCAGGACGTGACCTTACTGATTAC-CTCATGAAGATCTTAACAGAG 678
||| ||| | ||||| || |||||||| || ||| | || ||||||||| |||| |||
Sbjct 698 ACGTCTTG-ATCTTGCTGGTCGTGACCTCACGGATG-CGCTGATGAAGATCCTAACCGAG 755
Query 679 CGTGGTTACTCATTCACTACCTCAGCAGAGCGTGAAATTGTAAGGGATGTGAAAG-AGAA 737
||||||||||| ||||| ||| ||||||||||||||||||| || || | |||| ||||
Sbjct 756 CGTGGTTACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACAT-AAAGGAGAA 814
Query 738 ACTTT-CTTACATAGCTCTTGACTACGAGCAAGAGA-TGGACACGGC-AAACACAAGCTC 794
|||| || |||| ||||||||||||||||| || | | || || || ||| || |||||
Sbjct 815 GCTTTGCT-ACATTGCTCTTGACTACGAGCAGGA-ACTCGAGACAGCCAAA-ACCAGCTC 871
Query 795 ATCCGTTGAGAAGAGTTACGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAG 854
||| |||||||||| |||||| | |||||||| || ||||||||||||||| |||| |
Sbjct 872 ATCTGTTGAGAAGAACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCG 931
Query 855 ATTCCGCTGCCCCGAGGTTCTGTT-CCAACCATCTTTGGTGGGAATGGA-AGCTGCTGGT 912
|||||| || || |||||||| || ||| |||||| || | || ||||| | |||||||
Sbjct 932 ATTCCGTTGTCCTGAGGTTCT-TTACCAGCCATCTATGATTGGTATGGAGAA-TGCTGGT 989
Query 913 ATTCATGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCT- 971
|| ||||| ||||| || || ||||| |||||||||||||| || ||||||||||| ||
Sbjct 990 ATCCATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGGAAGGA-CTT 1048
Query 972 GTATGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGAT 1031
||| || |||||||||||||||||||||||||| |||||||||||||| || || || ||
Sbjct 1049 GTACGGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCTGGAATCGCCGACAGAAT 1108
Query 1032 GAGCAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTTGTTGCTCCACC 1091
|||||||||||||||||||||||||||||||||||||||||| || || ||||| || ||
Sbjct 1109 GAGCAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTGCCCCTCC 1168
Query 1092 AGAGAGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAG-CATCACTCAGTACCTTCC 1150
||||||||| ||| ||||||||||||||| ||||| || | | || |||||||||||||
Sbjct 1169 AGAGAGGAAATACTCTGTCTGGATTGGAGGGTCCAT-CTTGGCCTCCCTCAGTACCTTCC 1227
Query 1151 AACAGATGTGGATAGCAAAGGCTGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGA 1210
| ||||||||||| |||||||| |||||||| |||||||| ||||| || || |||||||
Sbjct 1228 AGCAGATGTGGATCGCAAAGGCAGAGTATGACGAGTCAGGTCCATCGATTGTTCACAGGA 1287
Query 1211 AGTGCTTCT 1219
|||||||||
Sbjct 1288 AGTGCTTCT 1296
> AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837
FORWARD LENGTH=1544
Length=1544
Score = 1022 bits (553), Expect = 0.0
Identities = 954/1149 (83%), Gaps = 21/1149 (2%)
Strand=Plus/Plus
Query 84 GAA-AATGGCAGACGGTGAAGACATTCAGCCTCTTGTCTGTGACAATGGAACCGGAATGG 142
||| |||||| ||||||||||||||||| || ||||| |||||||||||||| |||||||
Sbjct 155 GAAGAATGGCGGACGGTGAAGACATTCAACCGCTTGTTTGTGACAATGGAACTGGAATGG 214
Query 143 TTAAGGCTGGATTTGCCGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATTGTTGGTC 202
||||||| ||||| || || || |||||||||||||| || || || |||||||| || |
Sbjct 215 TTAAGGCCGGATTCGCGGGTGACGATGCACCAAGAGCGGTTTTTCCGAGCATTGTAGGCC 274
Query 203 GTCCTCGTCACACTGGTGTGATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATG 262
||||||| ||||| ||||||||||| || ||||||||||| |||||||| ||||| || |
Sbjct 275 GTCCTCGCCACACGGGTGTGATGGTAGGGATGGGACAAAAGGATGCTTATGTTGGAGACG 334
Query 263 AGGCTCAGTCTAAGA-GAGGTATTTTAACAT-TGAAATATCCTATTGAGCATGGTATTGT 320
||||||| || || | | ||||| || || | |||| || || ||||||||||| |||||
Sbjct 335 AGGCTCAATC-AAAACGTGGTATCTTGAC-TCTGAAGTACCCAATTGAGCATGGAATTGT 392
Query 321 TAGCAACTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGT 380
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 393 TAATAATTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGT 452
Query 381 GGCACCTGAGGAGCACCCTGTTCTTCTC-ACTGAGGCTCCTCTCAACCCCAAGGCTAATC 439
|| ||||| || || || ||||| || || || ||||||||||| || || ||||| |
Sbjct 453 TGCCCCTGAAGAACATCCGGTTCT-CTTGACCGAAGCTCCTCTCAATCCGAAAGCTAACC 511
Query 440 GTGAGAAAATGACACAGATTATGTTTGAAACTTTCAACACTCCTGCTATGTATGTCGCTA 499
||||||| ||||| ||||| |||||||| || ||||| ||||||||||||||||| || |
Sbjct 512 GTGAGAAGATGACTCAGATCATGTTTGAGACATTCAATACTCCTGCTATGTATGTTGCCA 571
Query 500 TCCAAGCTGTTCTTTCCCTCTACGCCAGTGGTCGTACTACTGGTATTGTGCTCGACTCTG 559
| ||||||||||| || ||||| |||||||| ||||| ||||||||||| | |||||||
Sbjct 572 TTCAAGCTGTTCTCTCACTCTATGCCAGTGGCCGTACAACTGGTATTGTTTTGGACTCTG 631
Query 560 GAGATGGTGTGAGTCACACTGTTCCAATTTACGAAGGATATGCTCTTCCACACGCCATTC 619
||||||||||||| ||||| || ||||| ||||| || || ||||| |||||||| || |
Sbjct 632 GAGATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTACGCTCTCCCACACGCAATCC 691
Query 620 TGCGT-TTGGACCTTGCAGGACGTGACCTTACTGATTACCTCATGAAGATCTTAACAGAG 678
| ||| ||| |||| ||||| |||||||| || || |||||||||| ||| | ||||||
Sbjct 692 TACGTCTTG-ACCTAGCAGGTCGTGACCTCACGGACCACCTCATGAAAATCCTCACAGAG 750
Query 679 CGTGGTTACTCATTCACTACCTCAGCAGAGCGTGAAATTGTAAGGGATGTGAAAGAGAAA 738
||||| ||||| ||||| || | || || ||||||||||| || || ||||||||||
Sbjct 751 CGTGGATACTCCTTCACCACAACTGCTGAACGTGAAATTGTTAGAGACATGAAAGAGAAG 810
Query 739 CTTTCTTACATAGCTCTTGACTACGAGCAAGAGATGGACACGGC-AAACACAAGCTCATC 797
|| |||||||| ||||| |||| |||||||||| | || || | ||| |||||||| ||
Sbjct 811 CTCTCTTACATTGCTCTAGACTTCGAGCAAGAGCTAGAGACTTCCAAA-ACAAGCTCGTC 869
Query 798 CGTTGAGAAGAG-TTACGAG-TTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGA 855
||||||||| || || |||| || ||||||||||| ||||| |||||||||| ||||||
Sbjct 870 CGTTGAGAAAAGCTT-CGAGCTT-CCTGATGGACAAGTGATAACCATTGGAGCAGAGAGG 927
Query 856 TTCCGCTGCCCCGAGGTTCTGTTCCAACCATCTTTGGTGGGAATGGAAGCTGCTGGTATT 915
||||| || || || ||||||||||| || || || | ||||||||| | | || ||
Sbjct 928 TTCCGGTGTCCGGAAGTTCTGTTCCAGCCGTCAATGATCGGAATGGAAAATCCAGGAATC 987
Query 916 CATGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCT-GTA 974
||||| ||||| || || || |||||||| |||||||||||||| ||||| || || |||
Sbjct 988 CATGAAACCACATATAACTCTATCATGAAATGTGATGTGGATATTAGGAAAGA-CTTGTA 1046
Query 975 TGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAG 1034
||| ||||||||||| |||||||||||||| ||||| || |||| |||||| |||||
Sbjct 1047 TGGTAACATTGTGCTAAGTGGTGGAACCACAATGTTTGGAGGGATTGGTGATAGAATGAG 1106
Query 1035 CAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTTGTTGCTCCACCAGA 1094
||||||||| || |||||||||||||| || |||||||||||||| || |||||||| ||
Sbjct 1107 CAAAGAGATTACGGCTTTGGCTCCAAGTAGTATGAAGATTAAGGTCGTGGCTCCACCGGA 1166
Query 1095 GAGGAAGTACAGTGTCTGGATTGGAGGCTCCAT-TCTAGCATCACTCAGTACCTTCCAAC 1153
||||||||||||||| ||||| || ||||| || | | || |||||||| || ||||| |
Sbjct 1167 GAGGAAGTACAGTGTATGGATCGGTGGCTCTATAT-TGGCTTCACTCAGCACTTTCCAGC 1225
Query 1154 AGATGTGGATAGC-AAAGGCTGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAG 1212
|||||||||| || |||| | ||||| ||||| || || || |||||||| || |||||
Sbjct 1226 AGATGTGGATTGCGAAAG-CAGAGTACGATGAATCTGGACCCTCAATAGTGCATAGGAAA 1284
Query 1213 TGCTTCTAA 1221
|||||||||
Sbjct 1285 TGCTTCTAA 1293
> AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-17130210
FORWARD LENGTH=1453
Length=1453
Score = 1000 bits (541), Expect = 0.0
Identities = 948/1146 (83%), Gaps = 22/1146 (2%)
Strand=Plus/Plus
Query 85 AAAATGGCAGACGGTGAAGACATTCAGCCTCTTGTCTGTGACAATGGAACCGGAATGGTT 144
|||||||| ||||||||||| |||||||| || || || || || || || ||||||||
Sbjct 88 AAAATGGCGGACGGTGAAGATATTCAGCCGCTCGTTTGCGATAACGGGACTGGAATGGTC 147
Query 145 AAGGCTGGATTTGCCGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATTGTTGGTCGT 204
|||||||| ||||| || |||||||| || |||||||||||||| || || ||||| |||
Sbjct 148 AAGGCTGGTTTTGCAGGTGATGATGCTCCTAGAGCTGTATTCCCAAGTATCGTTGGCCGT 207
Query 205 CCTCGTCACACTGGTGTGATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAG 264
|| |||||||| || ||||||||||| ||||||||||| ||||| ||||| || || |||
Sbjct 208 CCACGTCACACGGGAGTGATGGTTGGAATGGGACAAAAGGATGCATACGTCGGAGACGAG 267
Query 265 GCTCAGTCTAAGA-GAGGTATTTTAACAT-TGAAATATCCTATTGAGCATGGTATTGTTA 322
|| ||||| || | | ||||| || || | | || ||||| ||||||||||||||||| |
Sbjct 268 GCACAGTCGAA-ACGTGGTATCTTGAC-TCTCAAGTATCCAATTGAGCATGGTATTGTCA 325
Query 323 GCAACTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGTGG 382
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 326 ACAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTGCGTGTTG 385
Query 383 CACCTGAGGAGCACCCTGTTCTT-CTCACTGAGGCTCCTCTCAACCCCAAGGCTAATCGT 441
| || || ||||| || ||| || || || || || || || || || |||||||| |||
Sbjct 386 CCCCGGAAGAGCATCCGGTT-TTGCTAACCGAAGCGCCGCTTAATCCGAAGGCTAACCGT 444
Query 442 GAGAAAATGACACAGATTATGTTTGAAACTTTCAACACTCCTGCTATGTATGTCGCTATC 501
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||
Sbjct 445 GAGAAGATGACACAGATCATGTTTGAAACATTCAACACTCCTGCTATGTATGTTGCCATT 504
Query 502 CAAGCTGTTCTTTCCCTCTACGCCAGTGGTCGTACTACTGGTATTGTGCTCGACTCTGGA 561
||||||||||| |||||||| || ||||| ||||||||||||||||| | |||||||||
Sbjct 505 CAAGCTGTTCTCTCCCTCTATGCTAGTGGCCGTACTACTGGTATTGTTTTGGACTCTGGA 564
Query 562 GATGGTGTGAGTCACACTGTTCCAATTTACGAAGGATATGCTCTTCCACACGCCATTCTG 621
||||||||||| ||||| || ||||| ||||| || ||||| ||||||||||| || |||
Sbjct 565 GATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTATGCACTTCCACACGCAATCCTG 624
Query 622 CGT-TTGGACCTTGCAGGACGTGACCTTACTGATTACCTCATGAAGATCTTAACAGAGCG 680
||| ||| | |||||||| |||||||| || || |||||||||| ||| | ||||||||
Sbjct 625 CGTCTTG-ATCTTGCAGGTCGTGACCTAACCGACCACCTCATGAAAATCCTGACAGAGCG 683
Query 681 TGGTTACTCATTCACTACCTCAGCAGAGCGTGAAATTGTAAGGGATGTGAAAGAGAAACT 740
||||||||||||||| || | || |||||||| ||||| || || |||| ||||| ||
Sbjct 684 TGGTTACTCATTCACCACAACTGCTGAGCGTGAGATTGTCAGAGACATGAAGGAGAAGCT 743
Query 741 TTCTTACATAGCTCTTG-ACTACGAGCAAGAGATGGACACGGC-AAACACAAGCTCATCC 798
|| ||||| || |||| |||| ||||||||| | || || | ||| || ||||||||
Sbjct 744 CTCGTACATTGC-CTTGGACTATGAGCAAGAGCTTGAGACTTCCAAA-ACCAGCTCATCT 801
Query 799 GTTGAGAAGAG-TTACGAGTTGCCTGATGGACAGGTGATCACCATTGGAGG-AGAGAGAT 856
|| |||||||| || |||| |||| || || || ||||| ||||| || || |||| | |
Sbjct 802 GTGGAGAAGAGCTT-CGAGCTGCCAGACGGTCAAGTGATAACCATCGG-GGCAGAGCGTT 859
Query 857 TCCGCTGCCCCGAGGTTCTGTTCCAACCATCTTTGGTGGGAATGGAAGCTGCTGGTATTC 916
|||| || || || ||||||||||| ||||| || | ||||||||| | | || ||||
Sbjct 860 TCCGGTGTCCTGAAGTTCTGTTCCAGCCATCCATGATCGGAATGGAAAATCCGGGAATTC 919
Query 917 ATGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTATG 976
|||| || |||||||| || |||||||| |||||||||||||||||||||||||| ||||
Sbjct 920 ATGAAACTACTTACAACTCAATCATGAAATGTGATGTGGATATCAGGAAGGATCTTTATG 979
Query 977 GAAACATTGTGCTCAGTGGTGGAACCACCATGTTCC-CTGGAATTGCTGATAGGATGAGC 1035
||||||||||||| |||||||| ||||| ||||| | ||| ||| ||||||||||||
Sbjct 980 GAAACATTGTGCTTAGTGGTGGCACCACAATGTTTGGCGGGA-TTGGTGATAGGATGAGT 1038
Query 1036 AAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTTGTTGCTCCACCAGAG 1095
||||| ||||| || ||||| || ||||| |||||||| || || ||||||||||| ||
Sbjct 1039 AAAGAAATCACCGCGTTGGCGCCGAGCAGTATGAAGATCAAAGTGGTTGCTCCACCGGAA 1098
Query 1096 AGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAG-CATCACTCAGTACCTTCCAACA 1154
|||||||||||||| ||||| || ||||| || || | | || |||||||| ||||| ||
Sbjct 1099 AGGAAGTACAGTGTTTGGATCGGTGGCTCTAT-CTTGGCTTCTCTCAGTACTTTCCAGCA 1157
Query 1155 GATGTGGATAGC-AAAGGCTGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAGT 1213
||||||||| || |||| | ||||||||||| || || || || || |||||||||||||
Sbjct 1158 GATGTGGATTGCGAAAGCC-GAGTATGATGAATCTGGACCGTCGATCGTCCACAGGAAGT 1216
Query 1214 GCTTCT 1219
||||||
Sbjct 1217 GCTTCT 1222
> AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:6474842-6477204
FORWARD LENGTH=1756
Length=1756
Score = 985 bits (533), Expect = 0.0
Identities = 954/1157 (82%), Gaps = 30/1157 (3%)
Strand=Plus/Plus
Query 81 ATAGAAAATGGCAGACGG-TGAAGACATTCAGCCTCTTGTCTGTGACAATGGAACCGGAA 139
||| |||||||| || || ||| || ||||| || | || ||||||||||| ||||| |
Sbjct 244 ATAAAAAATGGCTGA-GGCTGATGATATTCAACCAATCGTGTGTGACAATGGTACCGGTA 302
Query 140 TGGTTAAGGCTGGATTTGCCGGAGATGATGCACCAAGAGCTG-TATTCCCTAGCATTGTT 198
|||| |||||||||||||| ||||||||||| || || |||| | ||||| || |||||
Sbjct 303 TGGTGAAGGCTGGATTTGCAGGAGATGATGCTCCCAGGGCTGTTTTTCCC-AGTGTTGTT 361
Query 199 GGTCGTCCTCGTCA-CACTGGTGTGATGGTTGGTATGGGA-CAAAAAGATGCTTACGTTG 256
||| | || | || || |||||| |||||||| || | | || || ||||| || ||||
Sbjct 362 GGTAGGCCAAGACATCA-TGGTGTCATGGTTGGGAT-GAACCAGAAGGATGCATATGTTG 419
Query 257 GTGATGAGGCTCAGTCTAAGAGAGGTATT-TTAACATTGAAATATCCTATTGAGCATGGT 315
||||||| || || || |||||||||||| || || ||||| ||||||||||||||||||
Sbjct 420 GTGATGAAGCACAATCCAAGAGAGGTATTCTT-ACCTTGAAGTATCCTATTGAGCATGGT 478
Query 316 ATTGTTAGCAACTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTT 375
||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||
Sbjct 479 GTTGTTAGCAACTGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTT 538
Query 376 CGTGTGGCACCTGAGGAGCACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCT 435
||| | || ||||| ||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct 539 CGTATTGCTCCTGAAGAGCACCCTGTTCTTCTTACCGAGGCTCCTCTTAACCCAAAGGCC 598
Query 436 AATC-GTGAGAAAATGACACAGATTATGTTTGA-AACTTTCAACACTCCTGCTATGTATG 493
|| | | ||||| ||||| || || |||||||| | |||| ||| |||| ||||||||||
Sbjct 599 AA-CAGAGAGAAGATGACTCAAATCATGTTTGAGACCTTT-AACTCTCCCGCTATGTATG 656
Query 494 TCGCTATCCAAGCTGTTCTTTCCCTCTACGCCAGTGGTCGTACTACTGGTATTGTGCTCG 553
|||| |||||||||||||| ||| | ||||||||||||||||| || ||||||||||| |
Sbjct 657 TCGCCATCCAAGCTGTTCTCTCCTTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGG 716
Query 554 ACTCTGGAGATGGTGTGAGTCACACTGTTCCAATTTACGAAGGATAT-GCTCTTCCACAC 612
| ||||| ||||||||| ||||||||| ||||| |||| ||| | | ||||||| ||
Sbjct 717 ATTCTGGTGATGGTGTGTCTCACACTGTGCCAATCTACG-AGGGTTTCTCTCTTCCTCAT 775
Query 613 GCCATTCTGCGT-TTGGACCTTGCAGGACGTGACCTTACTGATTACCTCATGAAGAT-CT 670
||||| || ||| || |||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 776 GCCATCCTCCGTCTT-GACCTTGCTGGACGTGACCTTACTGATTACCTCATGAAGATCCT 834
Query 671 TAACAGAGCGTGGTTAC-TCATTCACTACCTCAGCAGAGCGTGAAATTGTAAGGGATGTG 729
| |||||| | |||||| | ||||| || |||||||||| ||||||||||| || |
Sbjct 835 T-ACAGAGAGAGGTTACAT-GTTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATC 892
Query 730 AAAGAGAAACT-TTCTTACATAGCTCTTGACTACGAGCAAGAGATGGACACGGCAAACAC 788
|| ||||| || | ||| | ||| ||||||||||||| |||||||| || |||| ||
Sbjct 893 AAGGAGAAGCTCTCCTT-TGTTGCTGTTGACTACGAGCAGGAGATGGAAACCTCAAAGAC 951
Query 789 AAGCTCATCCGTTGAGAAGAGTTACGAGTTGCCTGATGGACAGGTGATCACCATTGGAGG 848
||||| ||| | ||||||| || || || || ||||| || || ||||| ||||| |
Sbjct 952 CAGCTCTTCCATCGAGAAGAACTATGAATTACCCGATGGGCAAGTCATCACGATTGGTGC 1011
Query 849 AGAGAGATTCCGCTGCCCCGAGGTTC-TGTTCCAACCATC-TTTGGTGGGAATGGAAGCT 906
||||||||| | ||||| || | || ||||||| || || ||| |||||||||||||||
Sbjct 1012 TGAGAGATTCAGATGCCCAGAAG-TCTTGTTCCAGCCCTCGTTT-GTGGGAATGGAAGCT 1069
Query 907 GCTGGTATTCATGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAG 966
||||| || || ||||| || || || || ||||||||||||||||||||||||||||||
Sbjct 1070 GCTGGAATCCACGAGACAACCTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAG 1129
Query 967 GATCTGTATGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGAT 1026
|||||||| || |||||||||||||||||||||||||| |||||| | || || |||||
Sbjct 1130 GATCTGTACGGTAACATTGTGCTCAGTGGTGGAACCACTATGTTCTCAGGTATCGCTGAC 1189
Query 1027 AGGATGAGCAAAGAGATCACTGCT-TTGGCTCCAAGCAGCATGAAGATTAAGGTTGTTGC 1085
| ||||||||||| ||||| || ||| | ||||||||||||||||||||||| |||||
Sbjct 1190 CGTATGAGCAAAGAAATCACAGCACTTG-CACCAAGCAGCATGAAGATTAAGGTCGTTGC 1248
Query 1086 TCCACCAGAGAGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAGCATCACTCAGTAC 1145
||||| || |||||||||||||||||||| || || |||||||| || || ||||| ||
Sbjct 1249 ACCACCTGAAAGGAAGTACAGTGTCTGGATCGGTGGTTCCATTCTTGCTTCCCTCAGCAC 1308
Query 1146 CTTCCAACAGATGTGGATAGCAAAGGCTGAGTATGATGAGTCAGGGCCATCAATAGTCCA 1205
||||| ||||||||||| | ||||| |||||||||||| |||| ||| ||| || ||
Sbjct 1309 ATTCCAGCAGATGTGGATCTCCAAGGCCGAGTATGATGAGGCAGGTCCAGGAATCGTTCA 1368
Query 1206 CAGGAAGTGCTTCTAAG 1222
||| || || |||||||
Sbjct 1369 CAGAAAATGTTTCTAAG 1385
> AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313
FORWARD LENGTH=1707
Length=1707
Score = 937 bits (507), Expect = 0.0
Identities = 939/1148 (82%), Gaps = 28/1148 (2%)
Strand=Plus/Plus
Query 88 ATGGCAGACGGTGAAGACATTCAGCCTCTTGTCTGTGACAATGGAACCGGAATGGTTAAG 147
||||| || | ||| |||||||| ||| |||||||||||||||| || ||||||||||||
Sbjct 208 ATGGCCGATGCTGATGACATTCAACCTATTGTCTGTGACAATGGTACTGGAATGGTTAAG 267
Query 148 GCTGGATTTGCCGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATTGTTGGTCGTCCT 207
|||||||| || ||||||||||| || ||||| || ||||| || |||||||||| |||
Sbjct 268 GCTGGATTCGCTGGAGATGATGCTCCCAGAGCGGTTTTCCCCAGTGTTGTTGGTCGACCT 327
Query 208 CGTCA-CACTGGTGTGATGGTTGGTATGGGA-CAAAAAGATGCTTACGTTGGTGATGAGG 265
| || || |||||| |||||||| || | | || |||||||| || ||||||||||| |
Sbjct 328 AGACATCA-TGGTGTCATGGTTGGGAT-GAATCAGAAAGATGCGTATGTTGGTGATGAAG 385
Query 266 CTCAGTCTAAGAGAGGTATTTTAACATTGAAATATCCTATTGAGCATGGTATTGTTAGCA 325
| || || || |||||||| | ||||||||||| ||||||||||||||| |||||||||
Sbjct 386 CACAATCCAAAAGAGGTATCCTCACATTGAAATACCCTATTGAGCATGGTGTTGTTAGCA 445
Query 326 ACTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGTGGCAC 385
||||||||||||||||||||||||||||||||||||||||||||||||| ||| | || |
Sbjct 446 ACTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTATTGCTC 505
Query 386 CTGAGGAGCACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCTAATC-GTGAG 444
|||| |||||||| ||||| || || ||||||||||| ||||| || || || | | |||
Sbjct 506 CTGAAGAGCACCCGGTTCTACTTACCGAGGCTCCTCTTAACCCAAAAGCCAA-CAGAGAG 564
Query 445 AAAATGACACAGATTATGTTTGAAAC-TTTCAACACTCCTGCTATGTATGTCGCTATCCA 503
|| ||||| ||||| |||||||| || ||| || |||| ||||||||||| || || ||
Sbjct 565 AAGATGACTCAGATCATGTTTGAGACCTTT-AATTCTCCAGCTATGTATGTTGCCATTCA 623
Query 504 AGCTGTTCTTTCCCTCTACGCCAGTGGTCGTACTACTGGTATTGTGCTCGACTCTGGAGA 563
||||||||| || || ||||||||||||||||| || ||||||||| | |||||||| ||
Sbjct 624 AGCTGTTCTATCACTTTACGCCAGTGGTCGTACAACCGGTATTGTGTTGGACTCTGGTGA 683
Query 564 TGGTGTGAGTCACACTGTTCCAATTTACGAAGGATATGCTC--TTCCACACGCCATTCTG 621
||||||| ||||||||| || || ||||| || | | ||| ||||||| || || ||
Sbjct 684 TGGTGTGTCTCACACTGTGCCTATCTACGAGGGTT-T-CTCACTTCCACATGCTATCCTC 741
Query 622 CGTTTGGACCTTGCAGGACGTGACCTTACTGATTACCTCATGAAGATC-TTAACAGAGCG 680
||| | |||||||| || |||||||||||||||||||||||||||||| ||| | ||| |
Sbjct 742 CGTCTCGACCTTGCTGGTCGTGACCTTACTGATTACCTCATGAAGATCCTTACC-GAGAG 800
Query 681 TGGTTAC-TCATTCACTACCTCAGCAGAGCGTGAAATTGTAAGGGATGTGAAAGAGAAAC 739
|||||| | ||||| || ||||||| || |||||||| || || | || ||||| |
Sbjct 801 AGGTTACATG-TTCACCACAACAGCAGAACGGGAAATTGTGAGAGACATCAAGGAGAAGC 859
Query 740 TTTC-TTACATAGCTCTTGACTACGAGCAAGAGATGGACACGGC-AAACACAAGCTCATC 797
|||| || | ||| | |||||||||||||||||||| || | ||| || ||||| ||
Sbjct 860 TTTCCTTTG-TCGCTGTCGACTACGAGCAAGAGATGGAGACCTCGAAA-ACCAGCTCCTC 917
Query 798 CGTTGAGAAGAGTTACGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATT 857
| | || |||| || || || || || ||||| |||||||| || || | ||||||||
Sbjct 918 CATCGAAAAGAACTATGAATTACCCGACGGACAAGTGATCACGATCGGTGCTGAGAGATT 977
Query 858 CCGCTGCCCCGAGGTTCTGTTCCAACCATC-TTTGGTGGGAATGGAAGCTGCTGGTATTC 916
| | ||||| || || || ||||| ||||| |||| ||| |||||||||||| || || |
Sbjct 978 CAGGTGCCCAGAAGTCCTTTTCCAGCCATCATTTGTTGG-AATGGAAGCTGCAGGGATCC 1036
Query 917 ATGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTATG 976
| ||||| |||||||| || ||||||||||||||||| |||||||||||||| || || |
Sbjct 1037 ACGAGACAACTTACAACTCGATCATGAAGTGTGATGTTGATATCAGGAAGGACCTTTACG 1096
Query 977 GAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAGCA 1036
| |||||||||||||||||||| || || |||||| | || ||||| || | |||||||
Sbjct 1097 GTAACATTGTGCTCAGTGGTGGTACAACTATGTTCTCAGGTATTGCAGACCGTATGAGCA 1156
Query 1037 AAGAGATCACTGCT-TTGGCTCCAAGCAGCATGAAGATTAAGGTTGTTGCTCCACCAGAG 1095
|||||||||| ||| ||| | || |||||||||||||||||||| || || ||||| |||
Sbjct 1157 AAGAGATCACAGCTCTTGCC-CCGAGCAGCATGAAGATTAAGGTCGTGGCACCACCCGAG 1215
Query 1096 AGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAGCATCACTCAGTACCTTCCAACAG 1155
||||||||||||||||||||||| || || || || || || ||||| || ||||| |||
Sbjct 1216 AGGAAGTACAGTGTCTGGATTGGTGGTTCTATCCTTGCTTCCCTCAGCACTTTCCAGCAG 1275
Query 1156 ATGTGGATAGCAAAGGCTGAGTATGATGA-GTCAGGGCCAT-CAATAGTCCACAGGAAGT 1213
|||||||| | ||||| ||||||||||| | |||| ||| || | |||||||| || |
Sbjct 1276 ATGTGGATCTCTAAGGCAGAGTATGATGAAG-CAGGTCCAGGCATT-GTCCACAGAAAAT 1333
Query 1214 GCTTCTAA 1221
||||||||
Sbjct 1334 GCTTCTAA 1341
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65361109590
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5