BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478587
Length=1047
Score E
Sequences producing significant alignments: (Bits) Value
AT3G12250.4 | Symbols: TGA6, BZIP45 | TGACG motif-binding facto... 1696 0.0
AT5G06950.1 | Symbols: AHBP-1B, TGA2 | bZIP transcription facto... 1024 0.0
AT5G06960.1 | Symbols: OBF5, TGA5 | OCS-element binding factor ... 850 0.0
> AT3G12250.4 | Symbols: TGA6, BZIP45 | TGACG motif-binding factor
6 | chr3:3906351-3908583 FORWARD LENGTH=1068
Length=1068
Score = 1696 bits (918), Expect = 0.0
Identities = 974/1002 (97%), Gaps = 0/1002 (0%)
Strand=Plus/Plus
Query 46 TTTTATTTTCTCTACAATGTCACTCCTGGGAGGCTTGTACCGGGATCCCTTGGTAAAACT 105
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 67 TTTTATTATCTCTACAATGTCACTCCTGGGAGGCTTGTACCGGAATCCCTTGGTAAAACT 126
Query 106 TGGGACATTCTACCGTCTGATAGAGGGCAAATGCTTGCTGCTGCATCTGATTCCAGTGAT 165
|||| |||||||||||||||||||||||| |||| ||||||||| |||||||||||||||
Sbjct 127 TGGGGCATTCTACCGTCTGATAGAGGGCATATGCATGCTGCTGCCTCTGATTCCAGTGAT 186
Query 166 CGATCAAAGGATAAGATGGATCAAAAGACCCTTCGTAGGCTTGCTCAAAATCGTGAGGCA 225
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 CGATCAAAGGATAAGTTGGATCAAAAGACCCTTCGTAGGCTTGCTCAAAATCGTGAGGCA 246
Query 226 GCAAGAAAAAGCAGATTGAGGAAGAAAGCGTATGTTCAGCAGCTGGAAAATAGTCGATTA 285
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 247 GCAAGAAAAAGCAGATTGAGGAAGAAGGCGTATGTTCAGCAGCTGGAGAATAGTCGATTA 306
Query 286 AAGCTGACTCAACTTGAGCAGGAGCTGCAAAGAGCAAGACAGCAGGGCGTTTTCATCTCA 345
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 307 AAGCTGACTCAACTTGAGCAGGAGCTGCAAAGAGCAAGACAGCAGGGAGTTTTCATCTCA 366
Query 346 AGTTCAGGAGACCAAGCTCATTCTACTGGTGGAAATGGGGCTTTGGCATTTGATGCAGAA 405
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 367 AGTTCAGGAGACCAAGCTCATTCTACTGGTGGCAATGGGGCTTTGGCATTTGATGCAGAA 426
Query 406 CATTCACGATGGCTTGAAGAAAAGAACAGGCAAATGAACGAGCTGAGATCTGCCCTGAAT 465
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 427 CACTCACGATGGCTTGAAGAAAAGAACAGGCAAATGAACGAGCTGAGATCTGCCCTGAAT 486
Query 466 GCTCATGCAGGTGATACTGAGCTCCGAATAATTGTGGATGGAGTGATGGCTCACTATGAG 525
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 487 GCTCATGCAGGTGATACTGAGCTCCGGATAATTGTGGATGGAGTGATGGCTCACTATGAG 546
Query 526 GAGCTTTTCAGGATTAAGAGCAATGCAGCTAAGAATGATGTCTTCCACTTGTTATCTGGA 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 GAGCTTTTCAGGATTAAGAGCAATGCAGCTAAGAATGATGTCTTCCACTTGTTATCTGGA 606
Query 586 ATGTGGAAAACTCCAGCTGAGAGATGTTTCTTGTGGCTTGGCGGGTTCCGCTCATCCGAA 645
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 607 ATGTGGAAAACACCAGCTGAGCGATGTTTCTTGTGGCTTGGCGGGTTCCGCTCATCCGAA 666
Query 646 CTTCTCAAGCTTCTTGCGAATCAGCTAGAGCCCATGACAGAACGACAGGTAATGGGCCTA 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 667 CTTCTCAAGCTTCTTGCGAATCAGCTAGAGCCCATGACAGAACGACAGGTAATGGGCATC 726
Query 706 AATAGCTTGCAGCAGACGTCCCAGCAGGCGGAAGATGCTTTATCTCAGGGGATGGAGAGT 765
|||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 727 AATAGCTTGCAGCAGACGTCGCAGCAGGCAGAAGATGCTTTATCTCAAGGGATGGAGAGT 786
Query 766 TTACAACAATCCCTAGCTGATACTTTATCCAGTGGAACTCTTGGTTCCAGTTCATCTGAT 825
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 787 TTACAGCAATCCCTAGCTGATACTTTATCCAGTGGAACTCTTGGTTCCAGTTCATCGGAT 846
Query 826 AATGTCGCGAGCTACATGGGTCAGATGGCCATGGCGATGGGGCAGTTAGGCACCGTCGAA 885
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 847 AATGTCGCGAGCTACATGGGTCAGATGGCCATGGCAATGGGGCAGTTAGGCACCCTCGAA 906
Query 886 GGATTCATACGGCAGGCTGATAACTTAAGGCTGCAAACACTTCAACAGATGCTTAGAGTA 945
||||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||||
Sbjct 907 GGATTCATACGCCAGGCTGATAACTTGAGGCTGCAAACACTACAACAGATGCTTCGAGTA 966
Query 946 TTAACAACACGTCAGTCAGCTCGTGCTCTTCTTGCTATACACGATTATTCATCTCGATTA 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 967 TTAACAACACGTCAGTCAGCTCGTGCTCTTCTTGCTATACACGATTATTCATCTCGATTA 1026
Query 1006 CGTGCTCTTAGTTCCTTGTGGCTTGCCCGGCCAAGAGAGTGA 1047
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1027 CGTGCTCTTAGTTCCTTGTGGCTTGCCCGGCCAAGAGAGTGA 1068
> AT5G06950.1 | Symbols: AHBP-1B, TGA2 | bZIP transcription factor
family protein | chr5:2151025-2154553 FORWARD LENGTH=1649
Length=1649
Score = 1024 bits (554), Expect = 0.0
Identities = 796/913 (87%), Gaps = 16/913 (2%)
Strand=Plus/Plus
Query 143 CTGCTGCATCTGATTCCAGTGATCGATC-AAAGGATAAGATGGATCAAAAGACCCTTCGT 201
||||||| |||||||| ||||| ||||| || ||| ||||||||||||||||| ||||||
Sbjct 366 CTGCTGCTTCTGATTCGAGTGACCGATCGAAGGGA-AAGATGGATCAAAAGACTCTTCGT 424
Query 202 AGGCTTGCTCAAAATCGTGAGGCAGCAAGAAAAAGCAGATTGAGGAAGAAAGCGTATGTT 261
|||||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||
Sbjct 425 AGGCTTGCTCAAAACCGTGAGGCAGCAAGGAAAAGCAGATTGAGGAAGAAGGCTTATGTT 484
Query 262 CAGCAGCTGGAAAATAGTCGATT-AAAGCTGACTCAACTTGAGCAGGAGCTGCAAAGAGC 320
|||||||| || || || || || ||| || || || |||||||||||||||||||||||
Sbjct 485 CAGCAGCTAGAGAACAGCCGCTTGAAA-CTAACCCAGCTTGAGCAGGAGCTGCAAAGAGC 543
Query 321 AAGACAGCAGGGCGTTTTCATCTCAAGTTCAGGAGACCAAGCTCATTCTACTGGTGGAAA 380
||||||||||||||| ||||| ||| | |||||||||| || |||||||||||||||||
Sbjct 544 AAGACAGCAGGGCGTCTTCATTTCAGGCACAGGAGACCAGGCCCATTCTACTGGTGGAAA 603
Query 381 TGGGGCTTTGGCATTTGATGCAGAACATTCACGATGGCTTG-AAGAAAAGAACAGGCAAA 439
||| |||||||| |||||||| ||||||||||| ||| ||| |||||||||||| |||||
Sbjct 604 TGGTGCTTTGGCGTTTGATGCTGAACATTCACGGTGG-TTGGAAGAAAAGAACAAGCAAA 662
Query 440 TGAACGAGCTGAGATCTGCCCTGAATGCTCATGCAGGTGATACTGAGCTCCGAATAATTG 499
||||||||||||| ||||| |||||||| |||||||||||| ||||||| |||||||| |
Sbjct 663 TGAACGAGCTGAGGTCTGCTCTGAATGCGCATGCAGGTGATTCTGAGCTTCGAATAATAG 722
Query 500 TGGATGGAGTGATGGCTCACTATGAGGAGCTTTTCAGGATTAAGAGCAATGCAGCTAAGA 559
| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 723 TCGATGGTGTGATGGCTCACTATGAGGAGCTTTTCAGGATAAAGAGCAATGCAGCTAAGA 782
Query 560 ATGATGTCTTCCACTTGTTATCTGGAATGTGGAAAACTCCAGCTGAGAGATGTTTCTTGT 619
|||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 783 ATGATGTCTTTCACTTGCTATCTGGCATGTGGAAAACACCAGCTGAGAGATGTTTCTTGT 842
Query 620 GGCTTGGCGGGTTCCGCTCATCCGAACTTCTCAAGCTTCTTGCGAATCAGCTAGAGCCCA 679
|||| || || || || |||||||||||||| |||||||| ||||||||| | ||||| |
Sbjct 843 GGCTCGGTGGATTTCGTTCATCCGAACTTCTAAAGCTTCTGGCGAATCAGTTGGAGCCAA 902
Query 680 TGACAGA-ACGACAGGTAATGGGCCTAAATAGCTTGCAGCAGACGTCCCAGCAGGCGGAA 738
||||||| | ||||| | |||||| |||||| | |||| ||||| || |||||||| |||
Sbjct 903 TGACAGAGA-GACAGTTGATGGGCATAAATAACCTGCAACAGACATCGCAGCAGGCTGAA 961
Query 739 GATGCTTTATCTCAGGGGATGGAGAGTTTACAACAATCCCTAGCTGATACTTTATCCAGT 798
|||||||| ||||| ||||||||||| |||||||| || ||||||||||||||||| ||
Sbjct 962 GATGCTTTGTCTCAAGGGATGGAGAGCTTACAACAGTCACTAGCTGATACTTTATCGAGC 1021
Query 799 GGAACTCTTGGTTCCAGTTCATCTGATAATGTCGCGAGCTACATGGGTCAGATGGCCATG 858
|| ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||
Sbjct 1022 GGGACTCTTGGTTCAAGTTCATCAGGGAATGTCGCAAGCTACATGGGTCAGATGGCCATG 1081
Query 859 GCGATGGGGCAGTTAGGCAC-CGTCGAAGGATTCATACGGCAGGCTGATAACTTAAGGCT 917
|| ||||| ||||||| || | |||||||||| || || ||||||||||| || || ||
Sbjct 1082 GCAATGGGAAAGTTAGGTACAC-TCGAAGGATTTATCCGCCAGGCTGATAATTTGAGACT 1140
Query 918 GCAAACACTT-CAACAGATGCTTAGAGTATTAACAAC-ACGTCAGTCAGCTCGTGCTCTT 975
|||||| || ||||||||| | |||||||||||||| | | |||||||| ||||||||
Sbjct 1141 ACAAACA-TTGCAACAGATGATAAGAGTATTAACAACGA-GACAGTCAGCACGTGCTCTA 1198
Query 976 CTTGCTATACACGATTA-TTCATCTCGATTACGTGCTCTTAGTTCCTTGTGGCTTGCCCG 1034
||||| ||||||||||| ||| || || |||| ||||| || ||||| |||||||| ||
Sbjct 1199 CTTGCAATACACGATTACTTC-TCACGGCTACGAGCTCTAAGCTCCTTATGGCTTGCTCG 1257
Query 1035 GCCAAGAGAGTGA 1047
|| |||||||||
Sbjct 1258 ACCCAGAGAGTGA 1270
> AT5G06960.1 | Symbols: OBF5, TGA5 | OCS-element binding factor
5 | chr5:2154780-2157646 FORWARD LENGTH=1586
Length=1586
Score = 850 bits (460), Expect = 0.0
Identities = 765/912 (84%), Gaps = 22/912 (2%)
Strand=Plus/Plus
Query 147 TGCATCTGATTCCAGTGATCGATCAAAGGA-TAAGATGGATCAAAAGACCCTTCGTAGGC 205
||| |||||||| ||||| || ||||| || ||| |||||||||||||| ||||||||||
Sbjct 440 TGCTTCTGATTCTAGTGACCGTTCAAA-GAGTAAAATGGATCAAAAGACGCTTCGTAGGC 498
Query 206 TTGCTCAAAATCGTGAGGCAGCAAGAAAAAGCAGATTGAGGAAGAAAGCGTATGTTCAGC 265
| |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct 499 TCGCTCAAAACCGTGAGGCTGCAAGGAAAAGCAGATTGAGGAAGAAAGCATATGTTCAGC 558
Query 266 AGCTGGAAAATAGTCGATTAAAGCTGACTCAACTTGAGCAGGAGCTGCAAAGAGCAAGAC 325
|||| || || |||||||| ||||| || ||||||||||||||||| ||||||||| | |
Sbjct 559 AGCTAGAGAACAGTCGATTGAAGCTAACACAACTTGAGCAGGAGCTACAAAGAGCACGGC 618
Query 326 AGCAGGGCGT-TTTCATCTCAAGTTCAGGAGACCAAGCTCATTCTACTGGTGGAAATGGG 384
| ||||| || ||| |||||||| || ||||||||||| |||||||| | |||| |||||
Sbjct 619 AACAGGGTGTCTTT-ATCTCAAGCTCTGGAGACCAAGCCCATTCTACCGCTGGAGATGGG 677
Query 385 GCTTTGGCATTTGATGCAGAACATTCACGATGGCTTGAAGA-AAAGAACAGGCAAATGAA 443
|| |||||||||||| |||| | |||||||| ||||| ||| ||||| || |||||
Sbjct 678 GCAATGGCATTTGATGTAGAATACAGACGATGGCAGGAAGATAAA-AACAGACAGATGAA 736
Query 444 CGAGCTGAGATCTGCCCTGA-ATGCTCATGCAG-GTGATACTGAGCTCCGAATAATTGTG 501
|||||||| ||||| | | || |||| || | |||| ||||||| || ||||||||
Sbjct 737 GGAGCTGAGTTCTGCTAT-AGATTCTCACGC-GACTGATTCTGAGCTTCGGATAATTGTA 794
Query 502 GATGGAGTGATGGCTCACTATGAGGAGCTTTTCAGGATTAAGA-GCAATGCAGCTAAGAA 560
|||||||| || ||||||||||||||||||| ||||| ||| | |||| ||||||||||
Sbjct 795 GATGGAGTAATAGCTCACTATGAGGAGCTTTACAGGA-TAAAAGGCAACGCAGCTAAGAG 853
Query 561 TGATGTCTTCCACTTGTTATCTGGAATGTGGAAAACTCCAGCTGAGAGATGTTTCTTGTG 620
|||||||||||| || ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct 854 TGATGTCTTCCATTTATTATCAGGGATGTGGAAAACCCCAGCTGAGAGATGTTTCTTGTG 913
Query 621 GCTTGGCGGGTTCCGCTCATCCGAACTTCTCAAGCTTCTTGCGAATCAGCTAGAGCCCAT 680
||| ||||| ||||| ||||| ||||||||||||||| | |||| |||| | |||||| |
Sbjct 914 GCTCGGCGGTTTCCGTTCATCAGAACTTCTCAAGCTTATAGCGAGTCAGTTGGAGCCCTT 973
Query 681 GACAGAACGACAGGT-AATGGGCCTAAATAGCTTGCAGCAGACGTCCCAGCAGGCGGAAG 739
|||||||| ||| | | | | |||||| |||||| ||| | || ||||| || ||||
Sbjct 974 GACAGAACAACA-ATCGCTAGACATAAATAACTTGCAACAGTCTTCTCAGCAAGCAGAAG 1032
Query 740 ATGCTTTATCTCAGGGGATGGAGAGTTTACAACAATCCCTAGCTGATACTTTATCCAGTG 799
||||||| ||||| |||||||| | ||||| ||||| || |||||||||||||| ||||
Sbjct 1033 ATGCTTTGTCTCAAGGGATGGACAACTTACAGCAATCACTCGCTGATACTTTATCGAGTG 1092
Query 800 GAACTCTTGGTTCCAGTTCATCTGATAATGTCGCGAGCTACATGGGTCAGATGGCCATGG 859
| ||||| ||||| |||||||| | ||||| || |||||||||||||||||||||||||
Sbjct 1093 GGACTCTCGGTTCAAGTTCATCAGGGAATGTAGCTAGCTACATGGGTCAGATGGCCATGG 1152
Query 860 CGATGGGGCAGTTAGGCACCGTCGAAGGATTCATACGGCAGGCTGATAACTTAAGGCTGC 919
|||||||| ||||||| ||| | |||||||| || || |||||||||||||||||||| |
Sbjct 1153 CGATGGGGAAGTTAGGTACCCTTGAAGGATTTATCCGCCAGGCTGATAACTTAAGGCTAC 1212
Query 920 AAACACT-TCAACAGATGCTTAGAGTATTAACAACACGTCAGTCAGCTCGTGCTCTTCTT 978
||||| | |||||||||| | ||| |||||||||| || || || ||||||||||| |||
Sbjct 1213 AAACA-TATCAACAGATGGTGAGACTATTAACAACCCGACAATCGGCTCGTGCTCTCCTT 1271
Query 979 GCTA-TACACGATTATTCATCT-CGATTACGTGCTCTTAGTTC-CTTGTGGCTTGCCCGG 1035
|| | ||||| ||||| ||| | || |||||||||||||| || || ||||||||| |
Sbjct 1272 GC-AGTACACAATTATACAT-TGCGGTTACGTGCTCTTAGCTCTCTA-TGGCTTGCCAGA 1328
Query 1036 CCAAGAGAGTGA 1047
||||||||||||
Sbjct 1329 CCAAGAGAGTGA 1340
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51339298234
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5