BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478625 Length=756 Score E Sequences producing significant alignments: (Bits) Value AT3G12660.1 | Symbols: FLA14 | FASCICLIN-like arabinogalactan p... 1188 0.0 > AT3G12660.1 | Symbols: FLA14 | FASCICLIN-like arabinogalactan protein 14 precursor | chr3:4019060-4019827 FORWARD LENGTH=768 Length=768 Score = 1188 bits (643), Expect = 0.0 Identities = 721/758 (95%), Gaps = 7/758 (1%) Strand=Plus/Plus Query 1 ATGTCTTCTTCACTTACAATCTTCTTCTTC---TTTGCTTCCACATTCCTCTACACTTCA 57 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1 ATGTCTTCTTCACTTACAATCTTCTTCTTCTTTTTTGCTTCCACATTCCTCTACACTTCA 60 Query 58 TCAAATTCATTCAACATCACTAACATCTTAAACGAGCATGATGATTTCTCAACTTTCAAC 117 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 61 TCAAATTCATTCAACATCACTAACATCTTAAACGAGCACGATGATTTCTCAAATTTCAAC 120 Query 118 CAGCTTCTCTCCGAAACTCAGCTCGCTTCTACCATCAACAAACGTCAAACCATAACCGTC 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CAGCTTCTCTCCGAAACTCAGCTCGCTTCTACCATCAACAAACGTCAAACCATAACCGTC 180 Query 178 CTTGTGGTTTCCAACGGCGCACTCTCCTCTCTCTCCGGCCAACCAACCGCCGTTATCAAG 237 ||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||| Sbjct 181 CTTGTGGTTTCCAACGGTGCACTCTCCTCTCTCTCTGGCCAACCAACCTCCGTCATCAAG 240 Query 238 AAAATCCTTAGCCTCCACATCGTTTTAGATTACTATGACCAGAAGAAACTCAACAATCTG 297 |||||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||| Sbjct 241 AAAATCCTTAGCCTTCACATTGTTTTAGATTACTACGACCAGAAGAAACTCAAGAATCTG 300 Query 298 AGCAAGAAATCAGTACTCCTCACCACTCTTTTCCAATCTAGCGGCCTAGCCAGAGGCCAG 357 ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 301 AGCAAGAAAACAGTACTCCTCACCACTCTTTTCCAATCTAGCGGTCTAGCCAGAGGCCAA 360 Query 358 CAAGGGTTCTTGAACGCAACCGTTACGAAAGACGGAGACGTGGCGTTTGGATCTGCGGTT 417 ||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||| Sbjct 361 CAAGGGTTCTTGAACGCAACCGTTATGAAAAACGGAGACGTGGCGTTTGGTTCTGCGGTT 420 Query 418 CCTGGGTCTAGCCTTGATGCTCAGCTTCAAGACACTGTAGC-GTCACTACCATTTAACAT 476 ||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| Sbjct 421 CCTGGGTCTAGCCTTGATGCTCAGCTTCAAGACACTGTAGCAG-CACTACCGTTTAACAT 479 Query 477 CTCGGTGCTTCATATTAGTAGTGCTATAATGATTGATGTTAAAGGTGATAATGCACCTAC 536 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 CTCTGTGCTTCATATTAGTAGTGCTATAATGATTGATGTTAAAGGTGATAATGCACCTAC 539 Query 537 TGCTTCTCCTTTGTCACCGGTATCATCTCCACCGCGCCCTGCAGAATCACCTAAGGATGA 596 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 540 TGCTTCTCCTTTGTCACCGGTATCATCTCCACCACGCCCTGCAGAATCACCTAATGATGA 599 Query 597 TGGTCATGATTTTGACGAGCCACCATCCTCTGCTCCTGATGCTGCTGCTGATGGACCTTC 656 |||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 600 TGGTCAAGATTTTGACGAGCCACCATCCTCTGCTCCTGGTGCTGCTGCTGATGAACCTTC 659 Query 657 CGAAAACGCCGGCTCAGCCAATGGAGTTTCAAGGATCGATTCTCAGCCTGCGTTCACGTT 716 |||||||||||||||||| |||||||||||||| | |||||||||||| || ||| |||| Sbjct 660 CGAAAACGCCGGCTCAGCTAATGGAGTTTCAAGAAACGATTCTCAGCCCGCTTTCGCGTT 719 Query 717 TCCGCTGTTGATGTC-TTCCATTTGGTGGTTCATGGCT 753 | ||||||||||||| ||| |||||||||||||||||| Sbjct 720 TACGCTGTTGATGTCATTC-ATTTGGTGGTTCATGGCT 756 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36721161457 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5