BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478641
Length=1644
Score E
Sequences producing significant alignments: (Bits) Value
AT3G12780.1 | Symbols: PGK1 | phosphoglycerate kinase 1 | chr3:... 2647 0.0
AT1G56190.1 | Symbols: | Phosphoglycerate kinase family protei... 1631 0.0
AT1G79550.1 | Symbols: PGK | phosphoglycerate kinase | chr1:299... 632 3e-180
> AT3G12780.1 | Symbols: PGK1 | phosphoglycerate kinase 1 | chr3:4060971-4063306
REVERSE LENGTH=1768
Length=1768
Score = 2647 bits (1433), Expect = 0.0
Identities = 1580/1651 (96%), Gaps = 9/1651 (1%)
Strand=Plus/Plus
Query 1 TAACAACATTGTGAGTCACTCTCTCTGTTTCTCATCTCCTCATCTTTTTTATCTTC--T- 57
||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 98 TAAGAACATTGTGAGTCACTCTCTCTGTTTCTCATCTCCTCATC-TTTTTATCTTCTTTG 156
Query 58 -TTGATCCACATGGCTTCAGCTGCCGCAAGTCCCGCCTTTTCACTCCTTAAGTCCACCGG 116
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 157 ATTGATCCACATGGCTTCCGCTGCCGCAAGTTCCGCCTTTTCACTCCTTAAGTCCACCGG 216
Query 117 TGGC-GTCGCTTCCTCCGCCGGAACTCGCGCACGCGCCTCCCTTTTACCAATTCCCTCTA 175
|| || |||||||||||||||||||||||||| ||||||||| | |||||||||||||
Sbjct 217 -CGCTGTTGCTTCCTCCGCCGGAACTCGCGCACGTGCCTCCCTTCTGCCAATTCCCTCTA 275
Query 176 CCTCTGTTTCCGCGCGTCCTCTTGGCTTCTCCGCCACTCTCGATTCCCGTCGTTTCTCTC 235
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 276 CCTCTGTTTCCGCGCGTCCTCTAGGCTTCTCCGCCACTCTAGATTCCCGTCGTTTCTCTC 335
Query 236 TCCACGTTGCTTCCAAAGTTGAATCGGTGTGCGGGAAGGGAAGCAGAGGAGTGGTTTCTA 295
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 336 TCCACGTTGCTTCCAAAGTTGAATCGGTGCGTGGGAAGGGAAGCAGAGGAGTGGTTTCTA 395
Query 296 TGGCGAAGAAGAGCGTCGGAGATCTGACCTCAGCTGATTTGAAGGGGAAGAAGGTTTTCG 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 396 TGGCGAAGAAGAGCGTCGGAGATCTGACCTCAGCTGATTTGAAGGGGAAGAAGGTTTTCG 455
Query 356 TGAGAGCTGATCTCAATGTACCTCTCGATGATAACCAGACTATCACTGACGATACCAGAA 415
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 456 TGAGAGCTGATCTCAATGTACCTCTCGATGATAATCAGACTATCACTGACGATACCAGAA 515
Query 416 TCCGTGCCGCTATTCCAACGATCAAGTATTTGATCGACAATGGTGCTAAAGTTATCCTCT 475
|||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 516 TCCGTGCCGCCATTCCAACGATCAAGTATTTGATTGAAAATGGTGCTAAAGTTATCCTCT 575
Query 476 CCACTCATCTGGGAAGGCCAAAGGGAGTCACACCAAAGTTTAGTTTGGCTCCTCTTGTCC 535
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 576 CCACTCATCTGGGAAGGCCAAAGGGAGTCACCCCAAAGTTTAGTTTGGCTCCTCTTGTCC 635
Query 536 CTAGGCTCTCCGAGCTTCTTGGTATTGAGGTCACGAAAGCTGATGATTGTATCGGTCCAG 595
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 636 CTAGGCTCTCCGAGCTTCTTGGTATTGAGGTCACGAAAGCTGATGATTGTATTGGCCCAG 695
Query 596 AAGTAGAAAGCTTGGTGGCTTCTCTTCCTGAAGGTGGAGTTTTGCTTCTTGAGAATGTCA 655
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 696 AAGTGGAAAGCTTGGTGGCTTCTCTACCTGAAGGTGGAGTTTTGCTTCTTGAGAACGTCA 755
Query 656 GGTTTTACAAGGAAGAAGAGAAGAACGATCCTGAGTTTGCTAAGAAGCTTGCTTCTCTAG 715
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 756 GGTTTTACAAGGAGGAAGAGAAGAACGATCCTGAGTTTGCTAAGAAGCTTGCTTCTCTAG 815
Query 716 CTGACCTTTATGTCAATGATGCTTTCGGAACTGCTCACAGAGCTCATGCTTCTACCGAAG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 816 CTGACCTTTATGTCAATGATGCTTTCGGAACTGCTCACAGAGCTCATGCTTCTACCGAAG 875
Query 776 GAGTCACTAAGTTCTTGAAGCCTTCAGTTGCTGGTTTCCTTCTGCAAAAGGAGCTGGACT 835
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 876 GAGTCACTAAGTTCTTGAAGCCTTCAGTTGCTGGTTTCCTTTTGCAAAAGGAACTGGACT 935
Query 836 ATCTTGTTGGCGCTGTTTCAAACCCAAAGAGACCATTTGCAGCCATAGTGGGTGGTTCCA 895
| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 936 ACCTAGTTGGTGCTGTTTCAAACCCAAAGAGACCATTTGCAGCCATAGTGGGTGGTTCCA 995
Query 896 AGGTCTCATCAAAGATTGGAGTTATTGAATCGCTTCTGGAGAAATGTGATATCCTTCTTC 955
| |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 996 AAGTCTCATCCAAGATTGGAGTTATTGAATCGCTTCTGGAGAAGTGTGATATTCTTCTTC 1055
Query 956 TTGGTGGTGGAATGATCTTTACATTCTACAAGGCACAAGGTCTTTCAGTTGGTTCGTCCC 1015
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1056 TTGGTGGTGGAATGATCTTCACATTCTACAAGGCACAGGGTCTTTCAGTTGGTTCGTCCC 1115
Query 1016 TTGTTGAAGAAGACAAACTTGAATTGGCTACAGAACTCCTTGCCAAAGCTAAGGCCAAAG 1075
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1116 TTGTTGAAGAAGACAAGCTTGAATTGGCTACAGAACTCCTTGCCAAAGCTAAGGCCAAAG 1175
Query 1076 GAGTCTCTCTTTTGTTGCCAACAGATGTTGTGGTTGCTGACAAGTTTGCTCCTGATGCCA 1135
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1176 GAGTCTCTCTTTTGTTGCCAACAGATGTTGTAGTTGCTGACAAGTTTGCTCCTGATGCCA 1235
Query 1136 ACAGCAAGATTGTGCCTGCATCAGGCATTGAGGACGGATGGATGGGATTGGACATCGGTC 1195
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1236 ACAGCAAGATTGTGCCTGCATCAGGCATTGAGGACGGATGGATGGGACTGGACATTGGTC 1295
Query 1196 CAGACTCTATCAAAACTTTCAACGAAGCTCTGGACACAACACAAACAGTTATTTGGAATG 1255
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1296 CAGACTCTATCAAAACTTTCAACGAAGCTCTGGACACAACACAAACAGTCATTTGGAATG 1355
Query 1256 GACCTATGGGAGTTTTCGAGATGGAAAAGTTTGCGGCAGGAACAGAGGCGGTAGCGAATA 1315
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 1356 GACCTATGGGAGTTTTCGAGATGGAAAAGTTTGCGGCTGGAACAGAGGCGATAGCGAATA 1415
Query 1316 AACTAGCAGAGCTCAGTGGAAAAGGAGTGACAACGATAATAGGAGGAGGAGACTCGGTGG 1375
||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 1416 AACTAGCAGAGCTAAGTGAAAAAGGAGTGACAACGATAATAGGAGGAGGAGACTCAGTGG 1475
Query 1376 CTGCAGTGGAGAAAGTAGGAGTAGCAGGAGTCATGAGTCACATCTCCACTGGTGGTGGAG 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1476 CTGCAGTGGAGAAAGTAGGAGTAGCAGGAGTCATGAGTCACATCTCCACTGGTGGTGGAG 1535
Query 1436 CCAGCTTGGAGCTGTTGGAAGGCAAAGTACTTCCCGGTGTGATCGCCCTTGATGAAGCGA 1495
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1536 CCAGCTTGGAGCTGTTGGAAGGAAAAGTACTTCCCGGTGTGATCGCCCTTGATGAAGCAA 1595
Query 1496 TCCCAGTCACCGTTTAGAAACTCTTACCATCGATGAGTCAAACTCTGTATACTTACA-GA 1554
|||||||||| |||||||||||||||||||| || || ||||| ||||||||||| | ||
Sbjct 1596 TCCCAGTCACTGTTTAGAAACTCTTACCATCTATAAGGCAAACGCTGTATACTTAAAAGA 1655
Query 1555 GTTTCTTTCGCTGTAAATCTACCTATTCAACACTTGACTATTTATCAGAGTCTCGTTCTC 1614
|||||||||||| ||||||||||||| ||| |||| ||||| |||||||||||| ||| |
Sbjct 1656 GTTTCTTTCGCTTTAAATCTACCTATGCAAAACTTTACTATGTATCAGAGTCTCATTCCC 1715
Query 1615 CGGTATAGAAA-CTCATATATTAAAATTCTG 1644
||| | ||||| |||| ||||||||||||||
Sbjct 1716 CGGAAAAGAAAACTCACATATTAAAATTCTG 1746
> AT1G56190.1 | Symbols: | Phosphoglycerate kinase family protein
| chr1:21028238-21030649 FORWARD LENGTH=1797
Length=1797
Score = 1631 bits (883), Expect = 0.0
Identities = 1285/1475 (87%), Gaps = 43/1475 (3%)
Strand=Plus/Plus
Query 55 TCT-TTGA-TCCACATGGCTT-CAGCTGCCGCAAGTCCCGCCT-TTTC-ACTCCTTAAGT 109
||| |||| | |||||||||| || | ||||||| | | | || |||| | || | || |
Sbjct 152 TCTGTTGACTTCACATGGCTTCCA-CCGCCGCAACTGCAG-CTCTTTCGA-TCATCAAAT 208
Query 110 CCACCGGTGGCGTCG-CTTCCTCCGCCGGAACTCGCGCACGCGCCTCCCTTT-TACCA-A 166
|||||||||||| || | | | | | | ||| | | ||||||| ||||| | || |
Sbjct 209 CCACCGGTGGCGCCGCCGT--TAC-AC-G--CTC-CTCCCGCGCCT-CCTTTGGA-CACA 259
Query 167 TTCCCTCTACCTCTGTTTCCGCGCGTC-CTCTTGGCTTCTCCGCCACTC-TCGATTCCCG 224
||||||| || ||||| ||||| |||| | ||||||||||||||| || | || | |
Sbjct 260 TTCCCTCCACATCTGTCTCCGCACGTCGC-CTTGGCTTCTCCGCC-GTCGTTGA--CTC- 314
Query 225 TCGTTTCTCTCTCCACGTTGCTTCCAAAGTTGAATCGGTGTGCGGGAAGGGAAG-CAGAG 283
||||||||| ||||||| || ||||| || | || ||| |||| ||||| | ||| |
Sbjct 315 TCGTTTCTCGGTCCACGTGGCGTCCAAGGTCCACTCCGTGCGCGGAAAGGG-CGCCAGGG 373
Query 284 GAGTGGTTTCTATGGCGAAGAAGAGCGTCGGAGATCTGACCTCAGCT-GATTTGAAGGGG 342
||||| || | |||||||||||||| || |||||||||| || | | ||||||||||||
Sbjct 374 GAGTGATTACGATGGCGAAGAAGAGTGTTGGAGATCTGAATTCTG-TAGATTTGAAGGGG 432
Query 343 AAGAAGGT-TTTCGTGAGAGCTGATCTCAATGTACCTCTCGATGATAACCAGACTATCAC 401
|||||||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 433 AAGAAGGTGTTT-GTTAGAGCTGATCTCAATGTACCTCTCGATGACAACCAGAATATCAC 491
Query 402 TGACGATACCAGAATCCGTGCCGCTATTCCAACGATCAAGTATTTGATCGACAATGGTGC 461
|||||| || |||||| | ||||| ||||| || ||||||| |||||| || ||||||||
Sbjct 492 TGACGACACTAGAATCAGAGCCGCCATTCCCACCATCAAGTTTTTGATTGAGAATGGTGC 551
Query 462 TAAAGTTATCCTCTCCACTCATCTGGGAAGGCCAAAGGGAGTCACACCAAAGTTTAGTTT 521
||| || ||||||||||||||| |||||||||||||||| ||||| |||||||| || ||
Sbjct 552 TAAGGTCATCCTCTCCACTCATTTGGGAAGGCCAAAGGGTGTCACTCCAAAGTTCAGCTT 611
Query 522 GGCTCCTCTTG-TCCCTAGGCTCTCCGAGCTTCTTGGTATTGAGGTCACGAAAGCTGATG 580
||||||||||| |||| || | || ||||| ||||||||||||||| |||||||||||
Sbjct 612 GGCTCCTCTTGTTCCC-AGATTATCAGAGCTCCTTGGTATTGAGGTCGTGAAAGCTGATG 670
Query 581 ATTGTATCGGTCCAGAAGTAGAAAGCTTGGTGGCTTCTCTTCCTGAAGGTGGAGTTTTGC 640
||||||| ||||||||||| |||| |||||||||||| ||||||||||||||||||||||
Sbjct 671 ATTGTATTGGTCCAGAAGTGGAAACCTTGGTGGCTTCCCTTCCTGAAGGTGGAGTTTTGC 730
Query 641 TTCTTGAGAATGTCAGGTTTTACAAGGAAGAAGAGAAGAACGATCCTGAGTTTGCTAAGA 700
|||||||||| || |||||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct 731 TTCTTGAGAACGTGAGGTTTTACAAGGAGGAAGAGAAGAACGAACCTGATTTTGCTAAGA 790
Query 701 AGCTTGCTTCTCTAGCTGACCTTTATGTCAATGATGCTTTCGGAACTGCTCACAGAGCTC 760
||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| |
Sbjct 791 AGCTTGCTTCTCTAGCTGACCTTTATGTCAACGATGCGTTCGGGACTGCTCACAGAGCCC 850
Query 761 ATGCTTCTACCGAAGGAGTCACTAAGTTCTTGAAGCCTTCAGTTGCTGGTTTCCTTCTGC 820
||||||| || || ||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 851 ATGCTTCAACAGAGGGAGTCACTAAGTTCTTGAAGCCATCAGTTGCTGGTTTCCTTTTGC 910
Query 821 AAAAGGAGCTGGACTATCTTGTTGGCGCTGTTTCAAACCCAAAGAGACCATTTGCAGCCA 880
|||||||| ||||||| |||||||| || |||||||||||||||||||||||||| ||||
Sbjct 911 AAAAGGAGTTGGACTACCTTGTTGGTGCGGTTTCAAACCCAAAGAGACCATTTGCTGCCA 970
Query 881 TAGTGGGTGGTTCCAAGGTCTCATCAAAGATTGGAGTTATTGAATCGCTTCTGGAGAAAT 940
| ||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct 971 TTGTGGGAGGTTCCAAGGTCTCATCTAAGATTGGAGTTATCGAATCGCTTCTTGAGAAAT 1030
Query 941 GTGATATCCTTCTTCTTGGTGGTGGAATGATCTTTACATTCTACAAGGCACAAGGTCTTT 1000
|||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1031 GTGACATCCTTCTGCTTGGTGGTGGAATGATCTTTACATTCTACAAGGCGCAAGGTCTTT 1090
Query 1001 CAGTTGGTTCGTCCCTTGTTGAAGAAGACAAACTTGAATTGGCTACAGA-ACTCCTTGCC 1059
| ||||| || |||||||||||||||||||| ||||||||||||||| | ||||||||||
Sbjct 1091 CCGTTGGCTCCTCCCTTGTTGAAGAAGACAAGCTTGAATTGGCTACA-ACACTCCTTGCC 1149
Query 1060 AAAGCTAAGGCCAAAGGAGTCTCTCTTTTGTTGCCAACAGATGTTGTGGTTGCTGACAAG 1119
|| |||||||||| |||||||||||| ||||| ||||||||||||||| |||||||||||
Sbjct 1150 AAGGCTAAGGCCAGAGGAGTCTCTCTGTTGTTACCAACAGATGTTGTGATTGCTGACAAG 1209
Query 1120 TTTGCTCCTGATGCCAACAGCAAGATTGTGCCTGCATCAGGCATTGAGGACGGATGGATG 1179
|| ||||||||||||||||||||||||||||| ||||||| |||| || || ||||||
Sbjct 1210 TTCGCTCCTGATGCCAACAGCAAGATTGTGCCAGCATCAGCCATTCCTGATGGGTGGATG 1269
Query 1180 GGATTGGACATCGGTCCAGACTCTATCAAAACTTTCAACGAAGCTCTGGACACAACACAA 1239
||||||||||||||||||||||| | ||||| ||||||||||||||||| || || ||
Sbjct 1270 GGATTGGACATCGGTCCAGACTCGGTGAAAACATTCAACGAAGCTCTGGATACCACGCAG 1329
Query 1240 ACAGTTATTTGGAATGGACCTATGGGAGTTTTCGAGATGGAAAAGTTTGCGGCAGGAACA 1299
||||| |||||||||||||| ||||||||||||||| | ||||||||||| ||||||
Sbjct 1330 ACAGTCATTTGGAATGGACCAATGGGAGTTTTCGAGTTTGAAAAGTTTGCAAAAGGAACT 1389
Query 1300 GAGGCGGTAGCGAATAAACTAGCAGAGCTCAGTGGAAAAGG-AGTGACAACGATAATAGG 1358
||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||
Sbjct 1390 GAGGCGGTAGCGAATAAACTAGCAGAGCTAAGCA-AAAAGGGAGTGACAACGATAATAGG 1448
Query 1359 AGGAGGAGACTCGGTGGCTGCAGTGGAGAAAGTAGGAGTAGCAGGAGTCATGAGTCACAT 1418
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1449 AGGAGGAGACTCGGTGGCAGCAGTGGAGAAAGTGGGAGTAGCAGGAGTCATGAGTCACAT 1508
Query 1419 CTCCACTGGTGGTGGAGCCAGCTTGGAGCTGTTGGAAGGCAAAGTACTTCCCGGTGT-GA 1477
|||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||||| |
Sbjct 1509 CTCCACAGGTGGTGGTGCCAGTTTGGAGCTCTTGGAAGGCAAAGTGCTTCCCGGTGTCG- 1567
Query 1478 TCGCCCTTGATGAAGCGATC-CCAGTCACCGTTTA 1511
|||| ||||||||||| | | |||||||| |||||
Sbjct 1568 TCGCTCTTGATGAAGCAA-CGCCAGTCACTGTTTA 1601
> AT1G79550.1 | Symbols: PGK | phosphoglycerate kinase | chr1:29924023-29926442
REVERSE LENGTH=1677
Length=1677
Score = 632 bits (342), Expect = 3e-180
Identities = 888/1148 (77%), Gaps = 52/1148 (5%)
Strand=Plus/Plus
Query 327 AGCTGATTTGAAGGGGAAGAAG-GTTTTCGTGAGAGCTGATCTCAATGTACCTCTCGATG 385
||| ||| ||||||| ||| || || |||||||| | ||||||||| || ||| | ||||
Sbjct 183 AGCGGATCTGAAGGGAAAG-AGTGTGTTCGTGAGGGTTGATCTCAACGTTCCTTTGGATG 241
Query 386 ATAAC-C-AGACTATCACTGACGATACCAGAATCCGTGCCGCTATTCCAACGATCAAGTA 443
||||| | | || ||||| || || ||||| || ||||||||| |||| || ||||||||
Sbjct 242 ATAACTCTA-AC-ATCACCGATGACACCAGGATTCGTGCCGCTGTTCCCACCATCAAGTA 299
Query 444 TTTGATCGACAATGG-TGCTAAAGTTATCCTCTCCACTCATC-TGGGAAGGCCAAAGGGA 501
||||| | ||||| | ||| ||| | |||| || ||| | |||| | ||||| ||
Sbjct 300 CTTGATGGGTAATGGAT-CTAGGGTTGTTCTCTGCAGTCA-CTTGGGCCGCCCAAAAGGT 357
Query 502 GTCACACCAAAGTTTAGTTTGGCTCCTCTTGT-CCCTAGGCTCTCCGAGCTTCTTGGTAT 560
|| || || |||| || || |||||||| ||| || | || || ||||||||| |
Sbjct 358 GTTACTCCTAAGTACAGCTTAAAGCCTCTTGTGCCC-AGATTGTCTGAACTTCTTGGTGT 416
Query 561 TGAGGTCACG-AA-AGCTGATGATTGTATCGGTCCA-GAAGT--AGAAAGCTTGGTGGCT 615
|||||| | || || |||| | ||| ||| | ||||| || ||| ||||| ||
Sbjct 417 TGAGGT--TGTAATGGCAAATGACTCTATTGGT-GAGGAAGTCCAG-AAG-TTGGTTGCA 471
Query 616 TCTCTTCCTGAAGGTGGAGTTTTGCTTCTT-GAGAATGTCAGGTTTTACAAGGAAGAAGA 674
|| ||||||||||| ||||||| |||| |||||||| ||||| ||| || |||||
Sbjct 472 GGACTACCTGAAGGTGGTGTTTTGC-TCTTGGAGAATGTGAGGTTCTACGCCGAGGAAGA 530
Query 675 GAAGAACGATCCTGAGTTTGCTAAGAAGCTTGCTTCTCTAGCTGACCTTTATGTCAATGA 734
|||||| |||||||| ||||| |||||||||||| |||| || || |||| || |||||
Sbjct 531 GAAGAATGATCCTGAATTTGCAAAGAAGCTTGCTGCTCTTGCCGATGTTTACGTTAATGA 590
Query 735 TGCTTTCGGAACTGCTCACAGAGCTCATGCTTCTACCGAAGGAGTCACTAAGTTCTTGAA 794
||| ||||||||||||||||||||||||||||| || || ||||| | || ||||||||
Sbjct 591 TGCCTTCGGAACTGCTCACAGAGCTCATGCTTCCACTGAGGGAGTTGCCAAATTCTTGAA 650
Query 795 GCCTTCAGTTGCTGGTTTCCTTC-TGCAAAAGGAGCTGGACTATCTTGTTGGCGCTGTTT 853
||||||||||||||||||||| | |||| ||||| || || || ||||| || |||||
Sbjct 651 GCCTTCAGTTGCTGGTTTCCT-CATGCAGAAGGAACTTGATTACCTTGTCGGAGCTGTGG 709
Query 854 CAAACCCAAAGA-GACCATTTGCAGCCATAGTGGGTGGTTCCAAGGTCTCATCAAAGATT 912
||||||| |||| | || ||||| ||||| || || || || ||||| ||| ||||||||
Sbjct 710 CAAACCCCAAGAAG-CCTTTTGCTGCCATTGTTGGAGGCTCAAAGGTTTCAACAAAGATT 768
Query 913 GGAGTTATTGAATCGCTTCTGGAGA-A-ATGT-GATATCCTTCTTCTTGGTGGTGGAATG 969
|| || ||||| || || || || | | | || || ||||| || || ||||| || |||
Sbjct 769 GGTGTCATTGAGTCTCT-CTTGA-ACACA-GTTGACATCCTCCTGCTCGGTGGAGGTATG 825
Query 970 ATCTTTACATTCTACAAGGCACAAGGTCTTTCAGTTGGTTCGTCCCTTGTTGAAGAAGAC 1029
|| ||||| ||||||||||||||||| || ||||| || || |||||||| || || |||
Sbjct 826 ATTTTTACTTTCTACAAGGCACAAGGACTCTCAGTCGGATCTTCCCTTGTGGAGGAGGAC 885
Query 1030 AAACTTGAATTGGCTACAGA-ACTCCTTGCCAAAGCTAAGGCCAAAGGAGTCTCTCTTTT 1088
|| ||||| ||||| | || |||| | | ||||| ||||||||||| |||||||| ||
Sbjct 886 AAGCTTGACTTGGCAA-AGTCACTCATGGAGAAAGCAAAGGCCAAAGGTGTCTCTCTCTT 944
Query 1089 GTTGCCAACAGATGTTGTGGTTGCTGACAAGTTTGCTCCTGATGCCAACAGCAAGATTGT 1148
| | ||||| ||||| || ||||||||||||||||||| ||||| ||||||||||| ||
Sbjct 945 GCTCCCAACCGATGTGGTTATTGCTGACAAGTTTGCTCCCGATGCTAACAGCAAGATAGT 1004
Query 1149 GCCTGC-ATCAGGCATTGAGGACGGATGGATGGGAT-TGGACATCGGTCCAGACTCTATC 1206
||| || | | | ||| || || |||||||| | | || || ||||||||||| |||
Sbjct 1005 GCCAGCCA-CTGCCATCCCTGATGGCTGGATGGG-TCTAGATATTGGTCCAGACTCCATC 1062
Query 1207 AAAACTTTCAACGAAGCTCTGGACACAACACAAA-C-AGTTATTTGGAATGGACCTATGG 1264
|| || |||| |||||||||||||||||| |||| | | | || |||||||| || ||||
Sbjct 1063 AAGACATTCAGCGAAGCTCTGGACACAAC-CAAAACCA-TCATCTGGAATGGTCCCATGG 1120
Query 1265 GAGT-TTTCGAGATG-GAAAAGTTTGCGGCAGGAACAGAGGCGGTAGCGAATAAACTAGC 1322
| || ||| || || || |||||||| || ||||| ||||| ||||| || | || ||
Sbjct 1121 GTGTGTTT-GA-ATTCGATAAGTTTGCTGCTGGAACTGAGGCCGTAGCAAAGCAGCTTGC 1178
Query 1323 AGAGCTCAGTGGAAAAGGAGTGACAACGATAATAGGAGGAGGAGACTCGGTGGCTGCAGT 1382
||| || || ||||| ||||| || || || || |||||||| ||||| || ||||| ||
Sbjct 1179 AGAACTAAGCGGAAAGGGAGTAACCACAATCATTGGAGGAGGTGACTCTGTTGCTGCCGT 1238
Query 1383 GGAGAAAGTAGGAGTAGCAGG-A-GTCATGAGTCACATCTCCACTGGTGGTGGAGCCAGC 1440
||||| || || | |||| | | ||||| |||||||| || || || || || ||
Sbjct 1239 CGAGAAGGTTGGTTTGGCAGACAAG--ATGAGCCACATCTCTACCGGAGGCGGTGCTAGT 1296
Query 1441 TTGGAGCT 1448
||||||||
Sbjct 1297 TTGGAGCT 1304
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81224481810
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5