BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478652 Length=956 Score E Sequences producing significant alignments: (Bits) Value AT3G12910.1 | Symbols: | NAC (No Apical Meristem) domain trans... 1454 0.0 > AT3G12910.1 | Symbols: | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr3:4109375-4110648 FORWARD LENGTH=954 Length=954 Score = 1454 bits (787), Expect = 0.0 Identities = 907/963 (94%), Gaps = 16/963 (2%) Strand=Plus/Plus Query 1 GTGAGTCCAAAGAGCAAAAAGGAGGAAATAGAAAAATCAAAGCCATGGAGAAGATGATAG 60 ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| Sbjct 1 GTGAGTCCAAAGAGCAAAAAGGAAGAAATAG--AAACCAAAGCCATGGAGAAGATGATAG 58 Query 61 AATCACGGGACAACACAAGAGAATCAGAAGACGAGGAAGTGTTAAAGCTTCCAGGGTTTA 120 || |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||| Sbjct 59 AACCACGGGACAACACAAGAGAATCAGAAGATGAGGATGCGTTAAAGCTTCCAGGGTTTA 118 Query 121 GGTTTCATCCAACGGACGAGGAGCTTGTAGGGTATTATCTCTCTAAGAAAGTACTTCT-a 179 |||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| | Sbjct 119 GGTTTCATCCGACGGATGAGGAGCTTGTAGGGTATTATCTCTCTAAAAAAGTGCTTCTCA 178 Query 180 aaaaaaCCAAGCAAGATCGATGAGATTGTTAGCCAAATCGATATCTATAAATTCGATCCG 239 |||||| | |||||||| |||||||| || |||||||| |||||||||||||| |||||| Sbjct 179 AAAAAA-CGAGCAAGATTGATGAGATCGTCAGCCAAATTGATATCTATAAATTTGATCCG 237 Query 240 TGGGATCTTCCAAGGTCGAGGAATACGGAGAAGGAAAGCTACTTCTTCTGCAAGAGAGGA 299 |||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct 238 TGGGATCTTCCAAGGTCGAGGAATACAGAGAAGGAGAGCTACTTCTTTTGTAAGAGAGGA 297 Query 300 AGGAAATATAGAAACAGCATAAGACCGAACCGAGTGACTGGTTCTGGTTTCTGGAAAGCC 359 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 298 AGGAAATACAGAAACAGCATAAGACCGAACCGAGTGACTGGTTCCGGTTTCTGGAAAGCC 357 Query 360 ACAGGGATAGACAAGCCTATCTATTCCGATGGATCCAATAAAGCCGTGATCGGTCTAAAG 419 |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct 358 ACAGGGATAGACAAGCCTGTCTATTCCGATGGATCCAACAAAGCCGTGATCGGTCTAAAG 417 Query 420 AAGACACTCGTTTATTACCTTGGAAGCGCCGGGAAAGGAAGCAAGACGGATTGGATGATG 479 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 418 AAGACACTCGTTTATTACCTAGGAAGCGCCGGGAAAGGAAACAAGACGGATTGGATGATG 477 Query 480 CACGAGTTTCGTCTCCCCACAGCCAATGACACAATCCCCGGTGGCCCTACACACTCTAAC 539 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 478 CACGAGTTTCGTCTCCCTACAGCCAATGACACAATCCCCGGTGGCCCTACACACTCTAAC 537 Query 540 CCTACTCCAACTTCCTTGCTACACGCAGAAGTATGGACGTTATGTCGGATATTCAAGAGA 599 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct 538 CCTACTCCAACTTCCTTGCTACACGCGGAAGTATGGACGTTATGCCGGATATTTAAGAGA 597 Query 600 AATGTGTCGAGTCGAAAATACACTCCGGACTGGAGAGAATTAGCAAATGGCAAACGTGTG 659 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 ACTGTGTCTAGTCGAAAATACACTCCGGACTGGAGAGAATTAGCAAATGGCAAACGTGTG 657 Query 660 AAGCAGCAACAATCTAATTACCAAGAAGCTTATTATATCAATTTTGGGGACAATGAAAGT 719 ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 658 AAGCAGCAACAATCTAATTACCAAGAAGCTTAT-ATA--AATTTTGGGGACAATGAAAGT 714 Query 720 AGTAGTA---CCAATGTGATCAACGTAAGGGAAGGCAAAGGGAACTACGAGAGAAGCGTT 776 ||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 715 AGTAGTAGTACCAACGTGATGAACGTTAGGGAAGGCAAAGGGAACTACGAGAGAAGCGTT 774 Query 777 TTCCAGCTTCAACAAACGCCTTATCAACATCAAAACCAGCCAATTCTCATGGACACCACA 836 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 775 TTCCAGCTTCAGCAAACGCCTTATCAACATCAAAACCAGCCAATTCTCATGGACACCACA 834 Query 837 CACGTTGATAATTCGTTTCAACATTTCTCCAACGATAACATTCACGAAGAAACCTACGAG 896 ||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 835 CACGTTGAT--T-CGTTTCAACATTTCTCCAACGATAACATTCACCATGAAACCTACGAG 891 Query 897 AATTGG--G-ACGAGCTTCGATCGGTTGTGGAATTTGCTTTCCCACCTTCTTCTCTTAGT 953 | |||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 892 ACTTGGCCGGACGAGCTTCGATCGGTTGTGGAATTTGCTTTCCCACCTTCTTTTCTTAGT 951 Query 954 TAG 956 ||| Sbjct 952 TAG 954 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46767990857 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5