BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478681
Length=2133
Score E
Sequences producing significant alignments: (Bits) Value
AT3G13070.1 | Symbols: | CBS domain-containing protein / trans... 3515 0.0
AT1G55930.1 | Symbols: | CBS domain-containing protein / trans... 1720 0.0
> AT3G13070.1 | Symbols: | CBS domain-containing protein / transporter
associated domain-containing protein | chr3:4191351-4195112
REVERSE LENGTH=2146
Length=2146
Score = 3515 bits (1903), Expect = 0.0
Identities = 2060/2137 (96%), Gaps = 5/2137 (0%)
Strand=Plus/Plus
Query 1 ATGACGGGTATGACACTTGAGTTATCTGTTCTGGGTCGATCTGTCATTGACTCGAAAACC 60
|||| ||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1 ATGATGGGTATGGCACTTGAATTATCTGTTCTGGGTCGATCTGTCATTGACTCTAAAACC 60
Query 61 TTAAATTTGAAGAGATATGGTCAAAAATCGAAGCTTTCCGGAAGATTTCTGACGAGAACT 120
|||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||
Sbjct 61 TTAAATTTGAAGAGATATGGTCAAAAATCGAAGCTTTCAGGAAGATTTCTGCCCAGAGCT 120
Query 121 GAGCTGCACTGCCCTGTGGCGTTGAGTTCTTCTATAA-GCTCCAATTTGAGTTTTAGATT 179
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 121 GAGCTGCACTGCCCTGTGGCGTTGAGTTCTTCTA-AACACTCCAATTTGAGTTTTAGATT 179
Query 180 CCGACGAAGTTGTGAATTTAGCTACAGAAGTCGCTTTATGCTGTTTAGCTCCAGTCAATG 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 CCGACGAAGTTGTGAATTTAGCTACAGAAGTCGCTTTATGCTGTTTAGCTCCAGTCAATG 239
Query 240 TCACGAAGGTAGTCAACAAAATTCCGAATCTGGTGAAAAGGAGCTGGAGTCGATTAAGGT 299
|||||| || ||||||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 240 TCACGAGGGCAGTCAACGAAAGTCCGATTCTGGTGAAAAGGAGCTGGAGTCGATTAAGGT 299
Query 300 TTTTCTGAAACGTGGAATTGTTTTGGGAGCTGTAGTGTGTGGAGTGTTCTTGTATGGGTG 359
||| ||||||||||||||||| | |||||| |||| |||||||| ||||||||||| ||
Sbjct 300 TTTGCTGAAACGTGGAATTGTGATAGGAGCTCTAGTCTGTGGAGTTTTCTTGTATGGATG 359
Query 360 CCAAAAAGTGTTGGCATCGGCTGGTGTGGTGGAAGCTGGCTATGAGGTGTTTGGTCAGAG 419
|| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 360 TCAGAAAGTGTTGGCATCGGCTGGTGTGGTCGAAGCAGGCTATGAGGTGTTTGGTCAGAG 419
Query 420 CGTAGTGTTGTTTAAGAATGCTTTGCCGAAAATTTACCAGGTTCTTAGGGTTCTTAGAGA 479
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 420 CGTAGTGTTGTTTAAGAATGCTTTGCCTAAAATTTACCAGGTTCTTACGGTTCTTAGAGA 479
Query 480 GCAAGGTCTAATTTTGGCTGCGTTGCTCAGCCTCTCAGCATTCTTCTCTATGGCAGAGAC 539
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 480 GCAAGGTCTAATTTTGGCTGCGCTGCTCAGCCTCTCAGCATTCTTCTCTATGGCAGAGAC 539
Query 540 GTCCATTACCACTCTGTGGCCGTGGAAGGTGCGTGAGTTGGCTGAGAAAGAACCAGAGAA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GTCCATTACCACTCTGTGGCCGTGGAAGGTGCGTGAGTTGGCTGAGAAAGAACCAGAGAA 599
Query 600 TGGTGTATTCAGAATGCTCCGGAGTGATGTTACCAGATTCTTGACGACTATACTTATTGG 659
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 600 TGGTGTATTCAGAATGCTCCGGAGTGATGTCACCAGATTCTTGACGACTATACTTATTGG 659
Query 660 AACAACTGTTGTGAATATTGCGGCAACTGCCCTGGTCACCGAAGCAGCAACAGCTATATT 719
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 660 AACAACTGTTGTGAATATTGCGGCAACTGCACTGGTCACTGAAGCAGCAACAGCTATATT 719
Query 720 TGGGGAAGCTGGTGTTAGTGCAGCCACTGGATTGATGACAGTGGCTATTTTACTCCTGAC 779
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 720 TGGGGAAGCTGGTGTTAGTGCTGCCACTGGATTGATGACAGTGGCTATTTTACTCCTGAC 779
Query 780 TGAGATTACTCCAAAAAGTGTTGCTGTCCACAATGCTCAAGAAGTTGCAAGGATTGTGGT 839
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 780 TGAGATTACTCCAAAAAGTGTTGCTGTGCACAATGCTCAAGAAGTTGCAAGGATTGTGGT 839
Query 840 CAGGCCAGTGGCATGGCTTTCCTTAATATTATATCCTGTCGGGAGGATTGTCACATATCT 899
|||||||||||| |||||||||||| |||||||||||||||| || ||||||||||||||
Sbjct 840 CAGGCCAGTGGCGTGGCTTTCCTTAGTATTATATCCTGTCGGAAGAATTGTCACATATCT 899
Query 900 GTCAATGGGAATACTGAAAATTCTTGGTTTGAAAGGACGGAGTGAACCATATGTTACTGA 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GTCAATGGGAATACTGAAAATTCTTGGTTTGAAAGGACGGAGTGAACCATATGTTACTGA 959
Query 960 AGATGAGTTGAAACTGATGCTAAGAGGTGCAGAATTAAGTGGTGCCATTGAAGAAGAGGA 1019
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 960 AGATGAGTTGAAACTGATGCTAAGAGGTGCAGAATTGAGTGGTGCCATTGAAGAAGAGGA 1019
Query 1020 GCAGGATATGATTGAAAATGTGTTGGAGATTAAGGATACCCATGTTCGAGAGGTGATGAC 1079
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1020 GCAGGATATGATTGAAAATGTGCTAGAGATTAAGGATACCCATGTTCGAGAGGTGATGAC 1079
Query 1080 TCCTCTTGTTGATGTAGTTGCAATTGACGCCAGCGCCAGTCTAGTCGAGTTCCATAGCAT 1139
||| |||||||||||||| |||||||||||||||||||||||||| || |||||||| ||
Sbjct 1080 TCCCCTTGTTGATGTAGTCGCAATTGACGCCAGCGCCAGTCTAGTTGATTTCCATAGTAT 1139
Query 1140 GTGGGTGACCCATCAGTACTCAAGGGTGCCTGTTTTTGAGCAGCGTATTGATAATATCGT 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1140 GTGGGTGACCCATCAGTACTCAAGGGTGCCTGTTTTTGAGCAGCGTATTGATAATATAGT 1199
Query 1200 GGGAATTGCATATGCTATGGATCTCCTAGATTATGTTCAGAAGGGTGATCTGCTCGAAAG 1259
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct 1200 GGGAATTGCATATGCTATGGATCTTCTAGATTATGTTCAGAAGGGTGATCTGTTAGAAAG 1259
Query 1260 TACTTCTGTGGGGGACATGGCACATAAACCTGCATACTTCGTCCCTGATTCAATGTCTGT 1319
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1260 TACTTCTGTGGGGGACATGGCACATAAACCTGCATATTTCGTCCCTGATTCAATGTCTGT 1319
Query 1320 TTGGAATCTTCTTAGAGAATTTCGAATAAGAAAGGTTCACATGGCAGTTGTCCTTAATGA 1379
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1320 TTGGAATCTTCTTAGAGAATTCCGAATAAGAAAGGTTCACATGGCAGTTGTCCTTAACGA 1379
Query 1380 ATATGGTGGAACGATTGGAATAGTAACTCTTGAAGATGTTGTCGAAGAGATTGTTGGTGA 1439
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1380 ATATGGTGGAACGATCGGAATAGTAACTCTTGAAGATGTGGTCGAAGAGATTGTTGGTGA 1439
Query 1440 AATTTTTGATGAAAATGATTCCAAAGAGGAGATTCAGAAGAAAACAGGGTATATTGTCAT 1499
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1440 AATTTTTGATGAAAACGATTCCAAAGAGGAGATTCAGAAGAAAACAGGATATATTGTCAT 1499
Query 1500 GAGAGATGAGGGCATATATGATGTTGATGCTAATACATCAATTGACCAGCTATCTGAAGA 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 GAGAGATGAGGGCATATATGATGTTGATGCTAATACATCAATTGACCAGCTATCTGAAGA 1559
Query 1560 ACTGAATATGAAAATGCCAGAGGGCATTCAGTACGAGACAGTCTCAGGCTTTGTGTGTGA 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 ACTGAATATGAAAATGCCAGAGGGCATTCAGTACGAGACAGTCTCAGGCTTTGTGTGTGA 1619
Query 1620 AGCCTTTGGGTATATCCCAAAAACTGGAGAAAGTGTGAAGGTTGTTCTTGAAAAGGAAAG 1679
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 GGCCTTTGGGTATATCCCAAAAACTGGAGAAAGTGTGAAGGTTGTTCTTGAAAAGGAAAG 1679
Query 1680 CTGGGAAGAGGATGGTGACGAGGAGGAAGGGAAACAGGAGAGGCAAGAGCCAAAGGAAAA 1739
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1680 CTGGGAAGAGGATGGTGAGGAGGAGGAAGGTAAACAGGAGAGGCAAGAGCCAAAGGAAAA 1739
Query 1740 GAACCAAATCTATAGAGTAGAGATACTAGCAGGGAATGCAAGAAAAGTTAGTGCTGTCCG 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1740 GAACCAAATCTATAGAGTAGAGATACTAGCAGGGAATGCAAGAAAAGTTAGTGCTGTCCG 1799
Query 1800 GTTTGAAAGAGTGAACGATATGGATCAAGTGTCAGAGGCAAGGGATGTAAAAAGCATGGT 1859
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1800 GTTTGAGAGAGTGAACGATATGGATCAAGTGTCGGAGGCAAGTGATGTAAAAAGCATGGT 1859
Query 1860 TCCCAAATTCGTAAGGAAATGGAGCAGCGAAGAAGATGATGGGAACTTGTCGAACGACGA 1919
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1860 TCCCAAATTTGTAAGGAAATGGAGCAGCGAAGAAGATGATGGGAACTTGTCCAACGAAGA 1919
Query 1920 ---CCAATCCGAGGATGCTGTCTTAGATGAACATGTACTGGCTGATAATAGCAAGAAACA 1976
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1920 AGACCAATCCGAGAATGCTGTCTTAGATGAACATGTACTGGCTGATAATAGCAAGAAACA 1979
Query 1977 ACAATGACACTGAGACACAGTTTCTTTTTTCTTTATGCTGCAATTTTCAATTCTTCTTTG 2036
||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 1980 ACAATGACACTGAGATACAGTTCCTTTTTTCTTTATGCTGCATTTTTCAATTCTTCTTTG 2039
Query 2037 AAAAGGAAAGAAGTAAGCTCGCAAATACAAGAAGCTTTCTTCTTTAGATTTAATGTAATA 2096
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2040 AAAAGGAAAGAAGTAAGCTCACAAATACAAGAAGCTTTCTTCTTTAGATTTAATGTAATA 2099
Query 2097 ATCAGGATGGATAAAATAAGAAATTCGTGTTAGGTAA 2133
||||||||||||||| |||||||||||||||||||||
Sbjct 2100 ATCAGGATGGATAAATTAAGAAATTCGTGTTAGGTAA 2136
> AT1G55930.1 | Symbols: | CBS domain-containing protein / transporter
associated domain-containing protein | chr1:20918717-20922232
FORWARD LENGTH=2239
Length=2239
Score = 1720 bits (931), Expect = 0.0
Identities = 1399/1623 (86%), Gaps = 39/1623 (2%)
Strand=Plus/Plus
Query 289 TCGATTAAGG-TTTTTCTGAAACGTGGAATTGTTTT-GGGAGCTGTAGTGTGTGGAGTGT 346
|||||| ||| |||| |||||||| ||||| ||||| ||| || || ||||||||||| |
Sbjct 461 TCGATT-AGGATTTTGCTGAAACGGGGAATCGTTTTAGGG-GCAGTGGTGTGTGGAGTTT 518
Query 347 TCTTGTATGGGTGCCAAAAAGTGTTGGCATCGGCTGGTGTGGTGGAAGCTGGCTATGAGG 406
| || ||||| || ||||| || ||||| | ||||||||| | | | || |
Sbjct 519 TGTTTTATGGATGTGGGAAAGTATTAGCATCAACAAGTGTGGTGG-A--T-G---TG-GC 570
Query 407 TGTTTGGTCAGAGCGTAGTGTTGTTTAAGAATGCTTTGCCGAAAATTTAC-CAGGTTCTT 465
| ||| || |||| || ||||||| |||||||||| ||| |||| || | |||||||||
Sbjct 571 T-TTTAGTAAGAGTATATTGTTGTTGAAGAATGCTTGGCCAAAAACTT-CTCAGGTTCTT 628
Query 466 AGGGTTCTTAGAGAGCAAGGTCTAATTTTGGCTGCG-TTGCTCAGCCTCTCAGCATTCTT 524
| |||||||||||||||||||||||| || |||| | || ||| | | |||||||||||
Sbjct 629 AAGGTTCTTAGAGAGCAAGGTCTAATCTTAGCTGTGCTT-CTCGGTTTATCAGCATTCTT 687
Query 525 CTCTATGGCAGAGACGTCCATTACCACTCTGTGGCCGTGGAAGGTGCGTGAGTTGGCTGA 584
||| ||||||||||| ||||| |||||||| ||||| ||||||||||| |||||||||||
Sbjct 688 CTCCATGGCAGAGACTTCCATCACCACTCTCTGGCCCTGGAAGGTGCGCGAGTTGGCTGA 747
Query 585 GAAAGAACCAGAGAATGGTGTATTCAGAATGCTCCGGAGTGATGTTACCAGATTCTTGAC 644
||||| || || ||||| || ||||| |||||||| ||||||||||||||||| |||||
Sbjct 748 AAAAGAGCCTGAAAATGGCGTTTTCAGGATGCTCCGCAGTGATGTTACCAGATTTTTGAC 807
Query 645 GACTATACTTATTGGAACAACTGTTGTGAATATTGCGGCAACTGCCCTGGTCACCGAAGC 704
|| ||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||
Sbjct 808 AACCATACTTATTGGAACAACTGTTGTTAATATTGCGGCGACTGCCTTGGTCACTAAAGC 867
Query 705 AGCAACAGCTATATTTGGGGAAGCTGGTGTTAGTGCAGCCACTGGATTGATGACAGTGGC 764
||||||||||| ||||| ||||||||||||||||||||||| ||| ||||||| || ||
Sbjct 868 GGCAACAGCTATTTTTGGTGAAGCTGGTGTTAGTGCAGCCACAGGAGTGATGACGGTAGC 927
Query 765 TATTTTACTCCTGACTGAGATTACTCCAAAAAGTGTTGCTGTCCACAATGCTCAAGAAGT 824
|| |||||||||||||| || ||||| |||||||| || || |||||||||||||| ||
Sbjct 928 CATATTACTCCTGACTGAAATAACTCCGAAAAGTGTAGCGGTTCACAATGCTCAAGAGGT 987
Query 825 TGCAAGGATTGTGGTCAGGCCAGTGGCATGGCTTTCCTTAATATTATATCCTGTCGGGAG 884
||| |||||||||||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct 988 TGCCAGGATTGTGGTCAGACCAGTGGCGTGGCTTTCCTTGATATTATATCCTGT-TGGAA 1046
Query 885 GA-TTGTCACATATCTGTCAATGGGAATACTGAAAATTCTTGGTTTGAAAGGACGGAGTG 943
|| | || |||||||| || |||||||| |||||||||||||||||||||||||||||||
Sbjct 1047 GAGTAGTAACATATCTTTCGATGGGAATTCTGAAAATTCTTGGTTTGAAAGGACGGAGTG 1106
Query 944 AACCATATGTTACTGAAGATGAGTTGAAACTGATGCTAAGAGGTGCAGAATTAAGTGGTG 1003
|||||||||||||||||||||| |||||||| |||||| | ||||||||||||||||| |
Sbjct 1107 AACCATATGTTACTGAAGATGAATTGAAACTAATGCTACGTGGTGCAGAATTAAGTGGGG 1166
Query 1004 CCATTGAAGAAGAGGAGCAGGATATGATTGAAAATGTGTTGGAGATTAAGGATACCCATG 1063
| || ||||| || |||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct 1167 CTATAGAAGAGGAAGAGCAGGATATGATTGAAAATGTGTTAGAGATAAAGGATACGCATG 1226
Query 1064 TTCGAGAGGTGATGACTCCTCTTGTTGATGTAGTTGCAATTGACGCCAGCGCCAGTCTAG 1123
|||||||||||||||||||||||||||||||||||||||| || | ||||| ||| || |
Sbjct 1227 TTCGAGAGGTGATGACTCCTCTTGTTGATGTAGTTGCAATAGATGGCAGCGGCAGCCTGG 1286
Query 1124 TCGAGTTCCATAGCATGTGGGTGACCCATCAGTACTCAAGGGTGCCTGTTTTTGAGCAGC 1183
| || ||||||| | | |||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1287 TTGACTTCCATAACTTTTGGGTGACCCATCAATACTCAAGGGTTCCTGTTTTTGAGCAGA 1346
Query 1184 GTATTGATAATATCGTGGGAATTGCATATGCTATGGATCTCCTAGATTATGTTC-AGAAG 1242
| |||||||| || || || |||||||||||||||||||||||||||||||||| | |||
Sbjct 1347 GGATTGATAACATAGTTGGTATTGCATATGCTATGGATCTCCTAGATTATGTTCCA-AAG 1405
Query 1243 GGTGA-TCTGCTCGAAAGTACTTCTGTGGGGGACATGGCACATAAACCTGCATACTTCGT 1301
||| | | |||| |||||||| |||||| ||||||||||||||||||||||| ||| ||
Sbjct 1406 GGTAAAT-TGCTTGAAAGTACCACTGTGGTGGACATGGCACATAAACCTGCATTCTTTGT 1464
Query 1302 CCCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAATTTCGAATAAGAAAGGTTCACAT 1361
||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 1465 CCCTGATTCGATGTCAGTTTGGAATCTTCTTAGAGAGTTTAGAATAAGAAAGGTTCACAT 1524
Query 1362 GGCAGTTGTCCTTAATGAATATGGTGGAACGATTGGAATAGTAACTCTTGAAGATGTTGT 1421
||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 1525 GGCAGTTGTTCTTAATGAATATGGTGGAACCATCGGAATAGTAACTCTTGAAGATGTGGT 1584
Query 1422 CGAAGAGATTGTTGGTGAAATTTTTGATGAAAATGATTCCAAAG-AGGAGATTCAGAAGA 1480
||||||||||||||||||||| ||||||||||| ||||| |||| |||| ||||||||||
Sbjct 1585 CGAAGAGATTGTTGGTGAAATATTTGATGAAAACGATTC-AAAGGAGGAAATTCAGAAGA 1643
Query 1481 AAACAGGGT-ATATTGTCATGAGAG-ATGAGGGCATATATGATGTTGATGCTAATACATC 1538
|||| |||| |||| || ||||||| | ||||| ||||||||||||||||| || || ||
Sbjct 1644 AAAC-GGGTTATATCGTGATGAGAGCA-GAGGGGATATATGATGTTGATGCCAACACTTC 1701
Query 1539 AATTGACCAGCTATCTGAAGAACTGAATATGAAA-ATGCCAGAGGGC-ATTCAGTACGAG 1596
||||||||| ||||||||||||| || || ||| ||| |||||||| || ||||| |||
Sbjct 1702 GATTGACCAGTTATCTGAAGAACTCAACAT-AAAGATGGCAGAGGGCCAT-CAGTATGAG 1759
Query 1597 ACAGTCTCAGGCTTTGTGTGTGAAGCCTTTGGGTATATCCCAAAAACTGGAGAAAGTGTG 1656
||||||||||| ||||| ||||| |||||||||||||||||||| || || || ||||||
Sbjct 1760 ACAGTCTCAGGTTTTGTCTGTGAGGCCTTTGGGTATATCCCAAAGACAGGTGAGAGTGTG 1819
Query 1657 AAGGTTGTTCTTGAAAAGGAAAGCTGGGAAGAGGATGGTGA-CGAGGAGGAAGGGAAA-C 1714
| ||| |||||||||||||||| |||||||||| ||| ||| | || | || ||| || |
Sbjct 1820 ACGGTAGTTCTTGAAAAGGAAAACTGGGAAGAGAATGATGAACAAG-ACGA-GGGTAAGC 1877
Query 1715 AGGAGAGGCAAGAGCCA-AAGGAAAAGAACCAAATCTATAGAGTAGAGATACTAGCAGGG 1773
| ||| | ||||| | | ||||| ||| ||||||| |||||| |||||||||||||||||
Sbjct 1878 ACGAGCGTCAAGATC-AGAAGGAGAAGCACCAAATTTATAGACTAGAGATACTAGCAGGG 1936
Query 1774 AATGCAAGAAAAGTTAGTGCTGTCCGGTTTGAAAGAGTGAACGATATGGATCAAGTGTCA 1833
||||| |||||||| ||||| |||||||| ||| |||| | ||||||||||||||||||
Sbjct 1937 AATGCCAGAAAAGTGAGTGCAGTCCGGTTCGAACGAGTTAGTGATATGGATCAAGTGTCA 1996
Query 1834 GAGGCAAGGGATGTAAAAAGCATGGTTCCCAAATTCGTAAGGAAATGGAGCAGCGAAGAA 1893
||||| | |||||||||| ||||||||||||||||||||| ||||||||||| || |||
Sbjct 1997 GAGGCCCGAGATGTAAAAAACATGGTTCCCAAATTCGTAAGAAAATGGAGCAGTGAGGAA 2056
Query 1894 GAT 1896
|||
Sbjct 2057 GAT 2059
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105772548315
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5