BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478696 Length=1323 Score E Sequences producing significant alignments: (Bits) Value AT3G13190.1 | Symbols: | Plant protein of unknown function (DU... 1794 0.0 > AT3G13190.1 | Symbols: | Plant protein of unknown function (DUF827) | chr3:4240172-4241961 FORWARD LENGTH=1395 Length=1395 Score = 1794 bits (971), Expect = 0.0 Identities = 1218/1333 (91%), Gaps = 34/1333 (3%) Strand=Plus/Plus Query 1 TCTTCTTCCCCAGTTTTCTTAATTTGGTAACCCTTGTTGCAGGCGGCTGTTGCTGCTCGG 60 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 9 TCTTCTTCCCCAGTTTTCCTAATTTGGTAACCCTTGTTGCAGGCGGCTGTTGCTGATCGG 68 Query 61 GTCTCTCGTCTCCATTTTTCCGATTAGTAAGCGTTAACTAGGAAGTCATGTGGTTCAGAA 120 ||||||| |||||| |||||||||||| | ||||||||||||||||||||||||||| Sbjct 69 GTCTCTCTTCTCCA-TTTTCCGATTAG--A---TTAACTAGGAAGTCATGTGGTTCAGAA 122 Query 121 TAGTCATTTCACGTGCAGCGACAGAGATAAAGTaaaaaaaGAAAAGTATA-AAG-ACCCG 178 ||| || |||||||||| ||||||||||||||||||||||||||||||| | | ||||| Sbjct 123 TAGGCAATTCACGTGCAATGACAGAGATAAAGTAAAAAAAGAAAAGTATAGAGGTACCCG 182 Query 179 TGACCTCTCTCTTGCACGGACGTGACACGTGAGCATGATTGTACATTAGAGACGAAGCTT 238 |||||||| |||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct 183 TGACCTCTTTCTTACACGAACGTGACACGTGAGCATGATTGTACATTAGAGACGAAG--- 239 Query 239 CGTGCCCTCTTTCCTCCTTCCATAGTTCCACTACAGTGTTCTTAAGTTTGGGAGTGGATG 298 | ||||||||||||||||||| | | |||||||||||||||||| ||||| ||| Sbjct 240 C-TGCCCTCTTTCCTCCTTCC--A--T----TACAGTGTTCTTAAGTTTACGAGTGAATG 290 Query 299 GCTACTTTTCATACCGTTAAAGATGCGGTGAAGCTCTTTGACGCTGGTATTTCTGGAGGA 358 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 291 GCTACTTTTCATACCGTTAGAGATGCGGTGAAGCTCTTTGACGCTGGTATTTCTGGAGGA 350 Query 359 AAACA-CATCAAC-AAGAGACAAGGACAGGGAGTGTTGGTGGAGGAGACAAATCTCTGTC 416 ||||| | ||||| ||| |||||| | ||||||||||||||||||||||||||||||||| Sbjct 351 AAACATC-TCAACAAAG-GACAAGAAGAGGGAGTGTTGGTGGAGGAGACAAATCTCTGTC 408 Query 417 CCTGGTCTAAAGAGGTTAACAAGTTGAAAGAAAAGATAAAGAATGCTGAGAAGACCAAGA 476 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 409 TCTGGAATAAAGAGGTTAACAAGTTGAAAGAAAAGATAAAGAATGCTGTGAAGACCAAGA 468 Query 477 TTGAGGCTTTGTTAGAGCTTGAGGAAGCTAAGAACACGGTTGAGCATCTCAGTCAGAAGC 536 |||||||||||||||| || |||||||||||||| ||||||||||| ||||||||| || Sbjct 469 TTGAGGCTTTGTTAGAACTGGAGGAAGCTAAGAAAACGGTTGAGCAACTCAGTCAGGAGT 528 Query 537 TGGGAATTAAGCAGACCATGACAAATGATGAGAAAGATTTAGATTTGAGTAGTAGTGTAA 596 |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 529 TGGGAATTAAGCGGAACATGATTAATGATGAGAAAGATTTAGATTTGAGTAGTAGTGTAA 588 Query 597 GAGTTGTGACTTCTGAGCTATGTGTTGCAAAGGAATCGATTCATAGAGTAGCTGAAGAGG 656 ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 589 GAGTTGTGACTTCAGAGCTAGGTGTTGCTAAGGAATCGATTCATAGAGTAGCTGAAGAGG 648 Query 657 AGAGTGAATTGTGTATGTTAATGGAATCTCTGAAGCTCGAGCTTCAAAACGTGGAGAAAG 716 ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 649 AGAGTGAGCTGTGTATGTTAATGGAGTCTCTTAAGCTCGAGCTTCAAAACGTGGAGAAAG 708 Query 717 AACATTCAGAGCTTAAAGAGATTGAGCAAAGAGAGAGGGATGTA-GAAGCCATTGAGGAT 775 |||||||||||||||||||||||||||||||||||||||| | |||||||||| ||| Sbjct 709 CACATTCAGAGCTTAAAGAGATTGAGCAAAGAGAGAGGGAT-CATCAAGCCATTGAAGAT 767 Query 776 CTTG-ATAAGGAAACCAAAGCTGCAAAGGCAGAACTCTCGCTGTTAGAAGAAGAGCTCAA 834 | || | |||||||| |||| |||||| | |||||||| ||||||||||||||||||| Sbjct 768 C-TGAAGAAGGAAACAAAAGATGCAAAAACCCAACTCTCGTTGTTAGAAGAAGAGCTCAA 826 Query 835 GATTGCTCTTTTCGAGGCTCGAGAAGCAAAAGATGCAGAGGAACACGCCAGGGAACGGCT 894 ||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 827 GATTGCTGTTTTTGAAGCTCAAGAAGCAAAAGATGCAGAGGAACACGCCAGGGAACGGCT 886 Query 895 AAATGTTGCAGTTTTAGAATCTGATTTCAGATCATCAGTTGAGGTGAAAGAAAGTGGTGC 954 ||||||||||||||||||||||||||||||||||| || || |||||||||||||| ||| Sbjct 887 AAATGTTGCAGTTTTAGAATCTGATTTCAGATCATTAGCTGTGGTGAAAGAAAGTGCTGC 946 Query 955 TGAAGAATTAACTGAGACAGAAGCTTTAAGAGCTTGCAGAGACGAAACACTCAAGACACT 1014 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 947 TGAAGAATTAACTGAGACAGAAGCTTTAAGAGCTTGCAGAGATGAAACACTCAAGACATT 1006 Query 1015 AGAAATGAGTGAGAGAGAGATTGAAGATATAAAAGCTGCAACACAAGATGCGTTGAAGAA 1074 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct 1007 AGAGATGAGTGAGAGAGAAATTGAAGATATAAAAGCTGCAACACAAGATGCTTTGAAGAA 1066 Query 1075 AGCTGAGATGGCTCAAGAAGCTACAATTGCGGTGGATGTAGAGCTTAAACGACGGTGTAA 1134 ||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||| Sbjct 1067 AGCTGAGATGGCTCAAGAAGCTACAATTGTGGTGGATGTTGAGCTGAAACGACGGCGTAA 1126 Query 1135 AGCAGCGAGTAGGATTTTGGCAGAATCCAAAATGTGTGCCAAATCAACAAAGGAAGT-CA 1193 ||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| | Sbjct 1127 AGCAGCGAGTAGGATCTTGGCAGAATCCAAAATGTGTGCCAAATCTACCAAGGAAGTGC- 1185 Query 1194 TCAAGTCAAAACCAAGATCAGCTTCAAAAGAAGGTTGTTTGGTCAAGTGTTAGAAGAATC 1253 |||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct 1186 TCAAGTCAAAACCAAGATCATCGTCAAAAGAAGGTTGCCTGGTCAAGTGTTAGAAGAATC 1245 Query 1254 TTGGTTTCTTTTGTAATTGTGAAAATCTGTA-A-CTT-ATATAACTAGAAGAAATGCCAC 1310 ||||| ||||||||||||||||||||| | ||| | ||||||||||||| || ||| Sbjct 1246 TTGGTCAGAGTTGTAATTGTGAAAATCTGTAGAACTTCA-ATAACTAGAAGAAGTGTCAC 1304 Query 1311 TTTGTTGGTTGTG 1323 ||||||||||||| Sbjct 1305 TTTGTTGGTTGTG 1317 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65110106865 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5