BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478720
Length=2117
Score E
Sequences producing significant alignments: (Bits) Value
AT3G13390.1 | Symbols: sks11 | SKU5 similar 11 | chr3:4351045-... 3421 0.0
AT1G55570.1 | Symbols: sks12 | SKU5 similar 12 | chr1:20757767... 1434 0.0
> AT3G13390.1 | Symbols: sks11 | SKU5 similar 11 | chr3:4351045-4353393
REVERSE LENGTH=2125
Length=2125
Score = 3421 bits (1852), Expect = 0.0
Identities = 2034/2121 (96%), Gaps = 16/2121 (1%)
Strand=Plus/Plus
Query 1 GAAATTCAAACCCCAAAGCATAA-T-TATATAACAATAAACAATTAGTACCCCACCAAA- 57
||||||||||||||||||||||| | ||||||||||||||||||||||| ||| |||
Sbjct 1 GAAATTCAAACCCCAAAGCATAATTATATATAACAATAAACAATTAGTA--CCA--AAAC 56
Query 58 ACACAAATAATCTAAAACTGTTATCTGAGCCaaaaaaaTTGTTTATTGTTATGCGAGGGG 117
||| ||| |||||| ||||||||||| | || |||||||||||||||||||||||||||
Sbjct 57 ACATAAAAAATCTATAACTGTTATCTCAACC--AAAAATTGTTTATTGTTATGCGAGGGG 114
Query 118 TTAAACTCTTGGCCGCGTGCCTCTACCTGGCCGCAGCCGCAACGGTGGTGGTCCGAGCAG 177
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
Sbjct 115 TTAAACTCTTGGCCGCGTGCCTCTACCTGGCCGCTGCCGCAACGGTGGTAGTCCGAGCCG 174
Query 178 AAGACCCTTACTTCCATCACGTATGGAACGTGACCTACGGAACCGTGTCTCCGCTCGGCG 237
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 175 AAGATCCTTACTTCCATCACGTATGGAACGTGACCTACGGAACCGTGTCTCCTCTCGGTG 234
Query 238 TTCCACAACAAGTCATTCTGATCAACGGCCAATTCCCTGGTCCcaacatcaactcaacct 297
||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||
Sbjct 235 TTCCACAACAAGTCATTCTCATCAACGGACAATTCCCTGGTCCCAACGTCAACTCAACCT 294
Query 298 ccaacaacaacatcatcatcaatgtcttcaacaacCTCGACGAACCTTTCCTCCTCACAT 357
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 295 CCAACAACAACGTCATCATTAATGTCTTCAACAACCTCGACGAACCTTTCCTCCTCACAT 354
Query 358 GGAATGGGATCCAACACAGGAAGAACTGTTGGCAAGATGGGACTCCAGGAACTATGTGTC 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 355 GGAATGGGATCCAACACAGGAAGAACTGTTGGCAAGATGGGACTCCAGGAACTATGTGTC 414
Query 418 CGATAATGCCCGGCACCAACTACACTTACCATTTCCAGCCTAAGGATCAGATCGGAAGCT 477
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 CGATCATGCCCGGCACCAACTACACTTACCATTTCCAGCCTAAGGATCAGATCGGAAGCT 474
Query 478 ATTTCTACTACCCCAGCACCGCCTTGCACCGTTCTGCTGGTGGATTCGGTGGACTCCGTG 537
|||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct 475 ATTTCTACTACCCCAGCACCGCGATGCACCGTTCCGCTGGTGGATTCGGTGGTCTCCGTG 534
Query 538 TGAACAGCCGTCTCCTCATCCCGGTCCCTTACGCTGACCCAGAAGATGACTACACCGTCT 597
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 535 TGAACAGCCGTCTCCTCATCCCGGTCCCTTATGCTGACCCAGAAGATGACTACACCGTCT 594
Query 598 TGATCGGTGATTGGTACACTAAGAGCCACACCCAATTGAAGAAATTCCTTGATGGCGGTC 657
|||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||
Sbjct 595 TGATCGGTGACTGGTACACCAAGAGCCACACCCAGTTGAAGAAATTCCTTGACAGCGGTC 654
Query 658 GTACTCTTGGCCGTCCAGATGGTATTCTCATCAACGGAAAGGCCGGGAAAGGCGATGGAT 717
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 655 GTACTCTTGGCCGTCCAGATGGTATTCTCATCAACGGAAAGTCCGGGAAAGGCGATGGAT 714
Query 718 CCGATGCACCTCTCTTTACCTTGAGACCTGGAAAGACCTACAGGGTTAGGGTCTGTAACG 777
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 715 CCGATGCACCTCTCTTTACCTTGAAACCTGGAAAGACCTACAGGGTTAGGATCTGTAACG 774
Query 778 TGGGTCTCAAGACATCTCTTAACTTTAGGATTCAGAATCACAAGTTGAAGCTCGTTGAGA 837
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 775 TGGGTCTCAAGACATCTCTTAACTTTAGGATTCAGAATCACAAGTTGAAGCTTGTTGAGA 834
Query 838 TGGAAGGATCGCACGTTCTCCAGAACGATTATGACTCTCTCGACGTTCACGTCGGTCAGT 897
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 835 TGGAAGGATCGCACGTTCTCCAGAACGATTATGACTCTCTCGACGTTCACGTTGGTCAGT 894
Query 898 GTTACGGAACCATCCTTTCCGCTAATCAGGAAGCTAAAGATTACTACATGGTTGCATCCT 957
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 GTTACGGAACCATCCTTACCGCTAATCAGGAAGCTAAAGATTACTACATGGTTGCATCCT 954
Query 958 CTAGGTTCTTGAAGTCGGTTATTACCACTACCGGTCTTCTCCGCTATGAGGGAGGAAAAG 1017
|||||||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||
Sbjct 955 CTAGGTTCTTGAAGTCGGTTATAACCACCACTGGTCTTCTCCGCTATGAGGGAGGCAAAG 1014
Query 1018 GCCCCGCTTCTTCGCAGCTACCCCCTGGTCCAGTTGGCTGGGCTTGGTCCTTGAACCAGT 1077
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1015 GTCCCGCTTCTTCGCAGCTACCCCCTGGTCCAGTCGGCTGGGCTTGGTCCTTGAACCAGT 1074
Query 1078 TCCGATCTTTCAGATGGAACTTGACCGCCAGTGCGGCCAGGCCTAACCCTCAGGGTTCTT 1137
||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1075 TCCGATCTTTCAGGTGGAACTTGACCGCCAGTGCAGCCAGGCCTAACCCTCAGGGATCTT 1134
Query 1138 ACCACTACGGAAAGATCAACATTACACGCACCATCAAGCTTGTGAACACTCAAGGCAAGG 1197
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1135 ACCACTACGGAAAGATCAACATCACACGCACCATCAAGCTTGTGAACACTCAAGGCAAGG 1194
Query 1198 TCAATGGAAAGCTCAGGTACGCGTTGAACGGAGTCTCGCACACTGACCCTGAAACCCCAT 1257
|| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1195 TCGATGGAAAGCTCAGGTACGCTTTGAACGGAGTCTCGCACACTGACCCCGAAACCCCAT 1254
Query 1258 TGAAGCTTGCCGAGTACTTTGGTGTTGCCGACAAGGTTTTCAAGTACGACAGCATCACTG 1317
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1255 TGAAGCTTGCGGAGTACTTTGGTGTTGCCGACAAGGTTTTCAAGTACGACTCCATCACTG 1314
Query 1318 ATAACCCAACCCCAGAACAAATCAAGAGCATCAAGATCGAGCCAAATGTTCTTAACATCA 1377
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1315 ATAACCCAACCCCAGAACAAATCAAGAGCATCAAGATCGTGCCAAATGTTCTTAACATCA 1374
Query 1378 CTCACCGCACCTTCATCGAGGTGGTGTTTGAGAACCACGAGAAGAGTGTTCAGTCGTGGC 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 CTCACCGCACCTTCATCGAGGTGGTGTTTGAGAACCACGAGAAGAGTGTTCAGTCGTGGC 1434
Query 1438 ACTTGGACGGTTACTCCTTCTTTGCCGTCGCTGTCGAGCCAGGGACTTGGACTCCAGAGA 1497
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1435 ACTTGGACGGTTACTCCTTCTTTGCCGTCGCTGTCGAGCCAGGGACTTGGACCCCAGAGA 1494
Query 1498 AGAGAAAGAACTACAACCTTCTGGACGCAGTGAGCAGACACACAGTCCAAGTCTACCCAA 1557
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1495 AGAGAAAAAACTACAACCTGCTGGACGCAGTGAGCAGACACACAGTCCAAGTCTACCCAA 1554
Query 1558 AATGTTGGGCAGCAATCTTGCTCACATTCGACAACTGTGGAATGTGGAACATTCGATCTG 1617
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1555 AATGTTGGGCAGCAATCTTGCTCACATTCGACAACTGTGGAATGTGGAACGTTCGATCTG 1614
Query 1618 AAAACTCCGAGAGACGTTACTTAGGACAGCAGCTTTACGCGAGTGTCTTGTCACCAGAGA 1677
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1615 AAAACTCCGAGAGACGCTACTTAGGACAGCAGCTTTACGCGAGTGTCTTGTCACCAGAGA 1674
Query 1678 AATCACTGAGAGATGAATACAACATGCCTGAGACAAGCCTCCAATGTGGTCTAGTCAAGG 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1675 AATCACTGAGAGATGAATACAACATGCCTGAGACAAGCCTCCAATGTGGTCTAGTGAAGG 1734
Query 1738 GTACACCTAAGCCTAATCCTTACGCTGGAGCCTAAGTTAAATTTTACaaaaaaaaaTATT 1797
|||||||||||||||| |||||||||||||||||||||||||||||||||||| || |
Sbjct 1735 GTACACCTAAGCCTAACCCTTACGCTGGAGCCTAAGTTAAATTTTACAAAAAATT-TACT 1793
Query 1798 TTTAATGCAACAAAATAGTTTGGATTCTTCTGTTGATTCAATCGATTGAGAGGCATTTGC 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1794 TTTAATGCAACAAAATAGTTTGGATTCTTCTGTTGATTCAATCGATTGAGAGGCATTTGC 1853
Query 1858 AAGACGTTTACCCAACGGAtttatttttctggttttttgggtctttt-tttttaattgtt 1916
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1854 AAGACGTTTACCTAACGGATTTATTTTTCTGGTTTTTTGGGTCTTTTCTTTTTAACTGTT 1913
Query 1917 ttacattttatgaaattgatttttAAAAGTATATGGTTTATTCGTATATACATGAAATTG 1976
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 TTAAATTTTATAAAATTGATTTTTAAAAGTATATGGTTTATTCGTATATACATGAAATTG 1973
Query 1977 AAATGTATGTATGTCTATCCCTTAAAGTAAttttttttttcttcttttaaaaagaagcat 2036
||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||
Sbjct 1974 AAATGTATGTATGTCTATCCCTTAA-GTAATTTTTTT---CTTGTTTTAAAAAGACGCAT 2029
Query 2037 taatttttatctttttttgttcttcacttttttGTAACGCGTATGTAATGTATCCATAAT 2096
||| ||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 2030 TAAGTTTC-TCTTTTTTTGTTCTTCATTTTTTTGTAACGCTTATGTAATGTATCCATAAT 2088
Query 2097 CTTCAATGAAATAAGCAGAGA 2117
|||||| ||||||||||||||
Sbjct 2089 CTTCAACGAAATAAGCAGAGA 2109
> AT1G55570.1 | Symbols: sks12 | SKU5 similar 12 | chr1:20757767-20760076
FORWARD LENGTH=2088
Length=2088
Score = 1434 bits (776), Expect = 0.0
Identities = 1381/1676 (82%), Gaps = 30/1676 (2%)
Strand=Plus/Plus
Query 112 GAGGGGTTAAACTCTTGGCCGCGTGCCTCTACCTGGCCGCAGCCGCAACG--GTGGTGGT 169
||||||||||||| ||||||| |||||| | | ||||| | | || | || || ||||
Sbjct 123 GAGGGGTTAAACTTTTGGCCGTGTGCCTTTGCGTGGCCAC-GGCG-ACCGTCATGATGGT 180
Query 170 CCGAGCAGAAGACCCTTACTTCCATCACGTATGGAACGTGACCTACGGAACCGTGTCTCC 229
|| ||| || |||||||||||||| ||||| ||||||||||| |||||||||| |||||
Sbjct 181 CCAAGCGGAGGACCCTTACTTCCACCACGTGTGGAACGTGACGTACGGAACCGCATCTCC 240
Query 230 GCTCGGCGTTCCACAACAAGTCATTCTGATCAACGGCCAATTCCCTGGTCCcaacatcaa 289
||||||||||||||||||||||| || |||||||| |||||||||||||| ||||||||
Sbjct 241 TCTCGGCGTTCCACAACAAGTCATCCTCATCAACGGTCAATTCCCTGGTCCTAACATCAA 300
Query 290 ctcaacctccaacaacaacatcatcatcaatgtcttcaacaacCTCGACGAACCTTTCCT 349
||| || || ||||||||| ||||| | ||||||||||||||||||||||| ||||||||
Sbjct 301 CTCGACTTCTAACAACAACGTCATCGTTAATGTCTTCAACAACCTCGACGAGCCTTTCCT 360
Query 350 CCTCACATGGAATGGGATCCAACACAGGAAGAACTGTTGGCAAGATGGGACTCCAGGAAC 409
| |||| ||| || ||||| |||||||||||||| ||||||||||| || | |||||
Sbjct 361 CATCACCTGGGCCGGAATCCAGCACAGGAAGAACTGCTGGCAAGATGGAACAGCTGGAAC 420
Query 410 TATGTGTCCGAT-AATGCCCGG-CACCAACTACACTTACCATTTCCAGCCTAAGGATCAG 467
||||||||||| | || || || |||| || |||||||||||||| ||||||||
Sbjct 421 AATGTGTCCGATCCCT-CCGGGTCA-GAACTTTACATACCATTTCCAGCCAAAGGATCAA 478
Query 468 ATCGGAAGCTATTTCTACTACCCCAGCACCGCCTTGCACCGTTCTGCTGGTGGATTCGGT 527
||||| ||||| ||||||||||| | ||| ||| |||| ||| | |||||||| || |||
Sbjct 479 ATCGGTAGCTACTTCTACTACCCGACCACAGCCATGCATCGTGCCGCTGGTGGCTTTGGT 538
Query 528 GGACTCCGTGTGAACAGCCGTCTCCTCATCCCGGTCCCTTACGCTGACCCAGAAGATGAC 587
|| || ||||||||||||||||| | |||||||| |||||||||||||| |||||||||
Sbjct 539 GGCCTTCGTGTGAACAGCCGTCTATTGATCCCGGTTCCTTACGCTGACCCTGAAGATGAC 598
Query 588 TACACCGT-CTTGATCGGTGATTGGTACACTAAGAGCCACACCCAATTGAAGAAATTCCT 646
||||| | ||| ||| || |||||||| || ||||| || || | ||||| |||||
Sbjct 599 TACACTATCCTT-ATCAACGACTGGTACACCAAAAGCCATACTCAGCTCAAGAAGTTCCT 657
Query 647 TGATGGCGGTCGTACTCTTGGCCGTCCAGATGGTATTCTCATCAACGG-AAAGGCCGGGA 705
|| | ||||||||| |||| ||||| ||||| |||||||||||||| ||| ||||||
Sbjct 658 CGACAGTGGTCGTACTATTGGTCGTCCTGATGGCATTCTCATCAACGGTAAA-TCCGGGA 716
Query 706 AAGGC-GATGGATCCGATGCACCTCTCTTT-ACCTTG-AGACC-TGGAAAGACCTACAGG 761
|| | ||||| || || |||||| ||| || ||| || || ||||| || |||||
Sbjct 717 AA-ACTGATGGCTCTGACAAACCTCT-TTTCACTTTGAAG-CCAGGGAAA-ACATACAGA 772
Query 762 GTTAGGGTCTGTAACGTGGGTCTCAAGACATCTCTTAACTTTAGGATTCAGAATCACAAG 821
||| | |||||||||||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct 773 GTTCGTATCTGTAACGTGGGTCTCAAGGCATCTCTTAACTTCAGGATTCAGAACCACAAA 832
Query 822 TTGAAGCTCGTTGAGATGGAAGGATCGCACGTTCTCCAGAACGATTATGACTCTCTCGAC 881
||||||| || ||||||||||| || || ||||| || ||||| |||||||| || ||
Sbjct 833 ATGAAGCTTGTCGAGATGGAAGGCTCACATGTTCTACAAAACGACTATGACTCGCTTGAT 892
Query 882 GTTCACGTCGGTCAGTGTTACGGAACCATCCTTTCCGCTA-ATCAGGAAGCTAAAGATTA 940
|| || ||||||||||||| || ||| | | || | | || ||| ||||||||||
Sbjct 893 GTCCATGTCGGTCAGTGTTTTGGTGTAATCGTCACGGC-AGACCAAGAACCTAAAGATTA 951
Query 941 CTACATGGTTGCATCCTCTAGGTTCTTGAAGTCGGTTATTACCACTACCGGTCTT-CTCC 999
||||||| |||| ||| | |||||||||||| | | || || || || || ||||
Sbjct 952 CTACATGATTGCTTCCACAAGGTTCTTGAAGAAACCTCTGACAACCACAGG-ATTGCTCC 1010
Query 1000 GCTATGAGGGAGGAAAAGGCCCCGCTTCTTCGCAGCTACCCCCTGG-TCCAGTTGGCTGG 1058
|||| |||||||| ||||| || || ||||| |||||||| | || || ||||| |||
Sbjct 1011 GCTACGAGGGAGGCAAAGGTCCTGCGTCTTCTCAGCTACCTGC-GGCCCCCGTTGGTTGG 1069
Query 1059 GCTTGGTCCTTGAACCAGTTCCGATCTTTCAGATGGAACTTGACCGCCAGTGCGGCCAGG 1118
|||||||| ||||| |||| |||||||||||| ||||||||||| ||||| || || ||
Sbjct 1070 GCTTGGTCTTTGAATCAGTACCGATCTTTCAGGTGGAACTTGACAGCCAGCGCCGCTAGA 1129
Query 1119 CCTAACCCTCAGGGTTCTTACCACTACGGAAAGATCAACATTACACGCACCATCAAGCTT 1178
|||||||| || || || |||||||||||||| || || || || ||||||||||||||
Sbjct 1130 CCTAACCCACAAGGCTCGTACCACTACGGAAAAATTAATATCACTCGCACCATCAAGCTC 1189
Query 1179 GTGAACACTCAAGGCAAGGTCAATGGAAAGCTCAGGTACGCGTTGAACGGAGTCTCGCAC 1238
||||||||||| || |||||| |||| ||||| ||||||||||||| ||| ||||| |||
Sbjct 1190 GTGAACACTCAGGGAAAGGTCGATGGCAAGCTTAGGTACGCGTTGAGCGGGGTCTCCCAC 1249
Query 1239 ACTGACCCTGAAACCCCAT-TGAAGCTTGCCGAGTACTTTGGTGTTGCCGACAAGGTTTT 1297
|| |||||||| || || | | |||||||| |||||||| || ||||| || ||||||||
Sbjct 1250 ACCGACCCTGAGACACC-TCTCAAGCTTGCTGAGTACTTCGGCGTTGCTGATAAGGTTTT 1308
Query 1298 CAAGTACGACAGCATCACTGATAACCCAACCCCAGAACAAATCAAGAGCATCAAGATCGA 1357
||||||||||| |||| | || ||||||| || || || ||||||| ||||||||||||
Sbjct 1309 CAAGTACGACACCATCTCGGACAACCCAAATCCTGATCAGATCAAGAACATCAAGATCGA 1368
Query 1358 GCCAAATGTTCTTAACATCACTCACCGCACCTTCATCGAGGTGGTGTTTGAGAACCACGA 1417
|| |||||||||||||||||||||||||||||||| || || ||||| |||||||||||
Sbjct 1369 ACCCAATGTTCTTAACATCACTCACCGCACCTTCATTGAAGTCGTGTTCGAGAACCACGA 1428
Query 1418 GAAGAGTGTTCAGTCGTGGCACTTGGACGGTTACTCCTTCTTTGCCGTCGCTGTCGAGCC 1477
|| |||||| ||||| ||||| |||||||| || |||||||| || || || || |||||
Sbjct 1429 GAGGAGTGTCCAGTCTTGGCATTTGGACGGCTATTCCTTCTTCGCTGTAGCGGTTGAGCC 1488
Query 1478 AGGGACTTGGACTCCAGAGAAGAGAAAGAACTACAACCTTCTGGACGCAGTGAGCAGACA 1537
|||||| ||||| ||||||||||| ||||||||||||||||| || ||||||||| ||||
Sbjct 1489 AGGGACATGGACACCAGAGAAGAGGAAGAACTACAACCTTCTAGATGCAGTGAGCCGACA 1548
Query 1538 CACAGTCCAAGTCTACCCAAAATGTTGGGCAGCAATCTTGCTCACATTCGACAACTGTGG 1597
||||||||| |||||||| || |||||||| |||||||||||||||||||||||||||||
Sbjct 1549 CACAGTCCAGGTCTACCCCAAGTGTTGGGCTGCAATCTTGCTCACATTCGACAACTGTGG 1608
Query 1598 AATGTGGAACATTCGATCTGAAAACTCCGAGAGACGTTACTTAGGACAGCAGCTTTACGC 1657
||||||||||||| | || || ||| | || ||||| ||||| |||||||| || |||||
Sbjct 1609 AATGTGGAACATTAGGTCGGAGAACGCAGAAAGACGCTACTTGGGACAGCAACTGTACGC 1668
Query 1658 GAGTGTCTTGTCACCAGAGAAATCACTGAGAGATGAATACAACATGCCTGAGACAAGCCT 1717
|| |||||||||||||| ||||| || | || |||||||||||||| |||||||||||
Sbjct 1669 AAGCGTCTTGTCACCAGAAAAATCTCTCCGGGACGAATACAACATGCCGGAGACAAGCCT 1728
Query 1718 CCAATGTGGTCTAGTCAAGGGTACA-CCTAAGCCTAATCCTTACGCTGGAGCCTAA 1772
||||||||||| |||||||| | | |||||| ||| ||||| || ||||| |||
Sbjct 1729 TCAATGTGGTCTTGTCAAGGGCA-AGCCTAAGGTTAACCCTTATGCCGGAGCTTAA 1783
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104969339595
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5