BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478791 Length=2877 Score E Sequences producing significant alignments: (Bits) Value AT3G13870.1 | Symbols: RHD3 | Root hair defective 3 GTP-binding... 4778 0.0 AT1G72960.1 | Symbols: | Root hair defective 3 GTP-binding pro... 1234 0.0 > AT3G13870.1 | Symbols: RHD3 | Root hair defective 3 GTP-binding protein (RHD3) | chr3:4565412-4571260 REVERSE LENGTH=2910 Length=2910 Score = 4778 bits (2587), Expect = 0.0 Identities = 2786/2882 (97%), Gaps = 14/2882 (0%) Strand=Plus/Plus Query 1 TATTTCTTTTGTCAAATAAGA-AGAAGCACTTATGACCTTACGAGAAGCAGTCGTCAAGG 59 ||||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||| | Sbjct 1 TATTTCTTTTGTCAAATTAGAGAGAAGCTCTTATGACCTTAGGAGAAGCAGTCGTCAAAG 60 Query 60 CACCGGTGCATCAATAGCGAGCTCGAGCCTAGAGATCTCTGTACCATTCTCTTCTTCATT 119 |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 61 CACCGGTGCATCAATAACGAGCTCGAGCCTAGAGATCTCTGTCCCATTCTCTTCGTCATT 120 Query 120 CATCACTCTATCTGCGTTTCGTTGAGAGATAATGGATGCCGCTTGCTCTACCCAGCTTAT 179 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 121 CATCACTCTATCTGCGTTTCGTTGAGCGATAATGGATGCCGCTTGCTCTACCCAGCTTAT 180 Query 180 CGATGGAGATGGTGTCTTTAATGTTTCTGGGGTTGATCATTTCATCAAGGAGGTTAAATT 239 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CGATGGGGATGGTGTCTTTAATGTTTCTGGGGTTGATCATTTCATCAAGGAGGTTAAATT 240 Query 240 GGAAGAATGTGGTCTTTCATATGCGGTTGTCTCGATTATGGGTCCACAAAGTAGCGGGAA 299 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 241 GGACGAATGTGGTCTTTCATACGCGGTTGTCTCGATTATGGGTCCACAAAGTAGTGGGAA 300 Query 300 GAGTACACTCTTGAATCATTTGTTTGGAACCAACTTTAGAGAAATGGATGCATTTAGAGG 359 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GAGTACGCTCTTGAATCATTTGTTTGGAACCAACTTTAGAGAAATGGATGCATTTAGAGG 360 Query 360 AAGGTCTCAGACAACTAAGGGAATTTGGATTGCTAGATGCGCTGGTATTGAGCCTTGCAC 419 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 AAGGTCTCAGACGACTAAGGGAATTTGGATTGCTAGATGCGCTGGTATTGAGCCTTGCAC 420 Query 420 CGTTGTGATGGATTTAGAGGGTACCGATGGGAGAGAGCGTGGTGAGGATGATACTGCTTT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CGTTGTGATGGATTTAGAGGGTACCGATGGGAGAGAGCGTGGTGAGGATGATACTGCTTT 480 Query 480 CGAGAAACAGAGTGCTCTTTTTGCACTTGCTGTCTCAGACATAGTTCTTATCAACATGTG 539 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 481 CGAGAAACAGAGTGCTCTTTTTGCACTTGCAGTCTCAGACATAGTTCTTATAAACATGTG 540 Query 540 GTGTCATGATATTGGTCGGGAACAAGCAGCAAATAAACCTCTTTTAAAGACTGTGTTCCA 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GTGTCATGATATTGGTCGGGAACAAGCAGCAAATAAACCTCTTTTAAAGACTGTGTTCCA 600 Query 600 GGTTATGATGCGGTTGTTTAGTCCGCGGAAGACAACTTTGATGTTTGTTATAAGAGATAA 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 GGTTATGATGCGGTTGTTTAGTCCGCGGAAGACAACTTTGATGTTTGTTATAAGAGATAA 660 Query 660 AACACGGACGCCACTGGAAAATTTAGAACCAGTGCTGAGGGAAGACATTCAAAAGATATG 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 AACACGGACGCCACTGGAAAATTTAGAACCAGTGCTGAGGGAAGACATTCAAAAGATATG 720 Query 720 GGATTCAGTCCCCAAGCCTCAGGCACACAAAGAAACTCCACTTAGTGATTTCTTCAATGT 779 ||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 721 GGATTCAGTTCCCAAGCCTCAGGCCCACAAAGAAACTCCACTTAGCGATTTCTTCAATGT 780 Query 780 TGAAGTAGTTGCTCTCTCGAGTTATGAAGAAAAGGAAGAACAGTTCAAAGAGCAGGTCTA 839 ||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 781 TGAAGTAGTTGCTCTCTCGAGTTATGAAGAAAAAGAAGAGCAATTCAAAGAGCAGGTCTA 840 Query 840 TAATTTGAGACAACGGTTCTTCCAATCTGTTGCACCTGGCGGGCTTGCTGGTGATCGACG 899 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 841 CAATTTGAGACAACGGTTCTTCCAATCTGTCGCACCTGGCGGGCTTGCTGGTGATCGACG 900 Query 900 AGGAGTTGTCCCTGCCAATGCTTTTGCTTTTAGTGCAAAACAGATGTGGCAAGTCATTAA 959 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 901 AGGAGTTGTCCCTGCCAATGCTTTTGCTTTTAGTGCAAAACAGATGTGGCAAGTCATCAA 960 Query 960 AGACAACAAAGACTTGGATCTTCCAGCACACAAGGTCATGGTAGCAACTGTGCGATGCGA 1019 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 961 AGACAACAAAGACTTGGATCTTCCAGCACACAAGGTCATGGTAGCAACTGTGCGATGTGA 1020 Query 1020 GGAAATTGCCAATGAAAAATTCTCTAGTTTTATCGCGAATGAGAATTGGCGCGAGTTGGA 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 GGAAATTGCCAATGAAAAATTCTCTAGTTTTATCGCGAATGAGAATTGGCGCGAGTTGGA 1080 Query 1080 AGAGGCTGTACAGTCTGGTCCTGTTTCCGGATTTGGAAGAAAGCTGAACTCAATTCTCCA 1139 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1081 AGAGGCTGTACAGTCTGGTCCTGTTTCCGGATTTGGAAGAAAGCTGAGCTCAATTCTCCA 1140 Query 1140 ATCCAGCTTATCAGAGTATGACACAGAAGCTACATACTTTGAAGAAAGTGTAAGATCATC 1199 | | |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1141 AGCAAGCTTATCAGAGTATGACACAGAAGCGACATACTTTGAAGAAAGTGTTAGATCATC 1200 Query 1200 CAAGAGACAACAGCTGCAAGAAAAGTTATTGCAACTTGTTCAACCAACTTTCCAAGACGT 1259 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 CAAGAGGCAACAGCTGCAAGAAAAGTTATTGCAACTTGTTCAACCAACTTTCCAAGACGT 1260 Query 1260 GCTTGGACATTTGAGATCTGGAGCACTTGAAAACTTCAAGAATGCTTTTGAGAAGGCCTT 1319 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 GCTTGGACATTTGAGGGCTGGAGCACTTGAAAACTTCAAGAATGCTTTTGAGAAGGCCTT 1320 Query 1320 GAATGCTGGAGAAGGGTTTTCATCATCTGCGAAATCCTGCGCTCAGTCATGCATATCTAA 1379 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1321 GGATGCTGGAGAAGGGTTTTCATCATCTGCGAAATCCTGCGCTCAGTCATGCATATCTAA 1380 Query 1380 GTTTGATAAAGGATGTGAAGAGGCTGTTATTGAACAAGCAAATTGGGATACATCTAAAAC 1439 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1381 GTTTGATAAAGGATGTGAAGAGGCTGTTATTGAACAAGCAAAATGGGATACATCTAAAAC 1440 Query 1440 TCGGGAAAAGCTTGAGCGTGATATTGAAGCCCATATCTCTTCTGTCCGTGCTGCAAAGTT 1499 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 1441 TCGGGAAAAGCTTGAGCGTGATATTGAAGCTCATATCTCTTCTGTCCGTACTGCAAAGTT 1500 Query 1500 GGCTGAACTGACTACTCTGTATGAGTCAAAACTAAATGTAGCATTATCCGGACCGGTGGA 1559 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 1501 GGCTGAACTGACTACTCTGTATGAGTCAAAACTAAATGTAGCCTTATCTGGACCGGTGGA 1560 Query 1560 AGCTCTTCTGGATGGGGCTAATGATGAAACATGGCCAGCAATAAGAAAGCTACTTAGACG 1619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1561 AGCTCTTCTGGATGGGGCTAATGATGAAACATGGCCAGCAATAAGAAAGCTACTTAGACG 1620 Query 1620 GGAAGGAGAATTGGCTGTCTATGGTCTCTCCGACGCATTATCTGGTTTCGAAATGGACGA 1679 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1621 GGAAGGAGAATTGGCTGTCTATGGTCTCTCCAACGCATTATCTGGTTTCGAAATGGACGA 1680 Query 1680 AGAAACACGGAGTAAAATGCTTGGTGATCTCGAGAACTATGCACGGGGTATTGTTGAAAC 1739 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 1681 AGAAACACGGAGTAAAATGCTTGCTGATCTCGAGAACTATGCACGAGGTATTGTTGAAAC 1740 Query 1740 CAAGGCAAAGGAAGAGGCTGGAAGAGTGTTGATGCGCATGAAGGATAGATTTGCTACAAT 1799 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 1741 CAAGGCAAAGGAAGAGGCTGGAAGAGCGATGATGCGCATGAAGGATAGATTTGCTACAAT 1800 Query 1800 CTTCAGCCATGATTCTGATTCAATGCCACGTGTTTGGACTGGAAAGGAGGACATCAGAGC 1859 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1801 CTTCAGCCATGATTCTGATTCAATGCCACGTGTTTGGACTGGAAAGGAGGACATCAGAGC 1860 Query 1860 AATCACAAAAATGGCTCGTTCTGCATCCTTGAAGCTGCTGTCTGTTATGGCTATTATACG 1919 ||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct 1861 AATTACAAAAATGGCTCGTTCTGCGTCCTTGAAGCTGCTGTCTGTTATGGCTGTTATACG 1920 Query 1920 CTTGGATGATGAACTCGATAATATTGAGAAGACATTGACGCTCTCTCTGTTTAATTCTAC 1979 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 1921 CTTGGATGATGAACTCGACAATATTGAGAAGACATTGACGCTAGCTCTGTTTAATTCTAC 1980 Query 1980 GGGCAACAATGCTACTAGCAAGAGCATCAGCACAATTGATTCACTTGCCTCAAGCACTTG 2039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1981 GGGCAACAATGCTACTAGCAAGAGCATCAGCACAATTGATTCACTTGCCTCAAGCACTTG 2040 Query 2040 GGAGCAGGTTGCACCAGAAAAGACTTTGATCACGCCTGTGCAGTGTAAATCACTGTGGAG 2099 |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 2041 GGAGAAGGTTGCACCAGAAAAGACGTTGATCACACCTGTGCAGTGTAAATCACTGTGGAG 2100 Query 2100 GCAATTCAAGAACGAGACAGAATATACCGTTACACAGGCCATTTCTGCACAGGAAGCTAA 2159 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2101 GCAATTTAAGAACGAGACAGAATATACCGTTACACAGGCCATTTCTGCACAGGAAGCTAA 2160 Query 2160 CCGACGAAATAACAACTGGCTGCCACCTCCATGGGCAATCCTTGCCCTGGTTGTTCTTGG 2219 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2161 CCGACGGAATAACAACTGGCTGCCACCTCCATGGGCAATCCTTGCCCTGGTTGTTCTTGG 2220 Query 2220 ATTCAATGAATTTATGACTCTCTTAAGAAATCCTCTATGGCTCTTAGTTCTTTTTGTGGG 2279 ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 2221 ATTTAATGAATTTATGACTCTCTTAAGAAATCCTCTATGGCTCTTAGTTCTATTTGTCGG 2280 Query 2280 ATACCTTATTTCCAAAGCCTTGTGGGTGCAATTAAATATTTCAGGAGAATTCCGCAACGG 2339 ||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2281 ATACCTTGTATCCAAAGCCTTGTGGGTGCAATTAAATATTTCAGGAGAATTCCAAAACGG 2340 Query 2340 CGCGCTACCTGGACTTCTCTCCTTGTCAACCAAATTCATTCCAACGGTCATGAACCTCCT 2399 || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2341 CGTGCTACCTGGACTTCTCTCTTTGTCAACCAAATTCATTCCAACGGTCATGAACCTCCT 2400 Query 2400 CAAAAAGCTTGCGGAAGAAGGACAAGCACCACCCACAAATAGCAACCAATCAATGAACTC 2459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2401 CAAAAAGCTTGCGGAAGAAGGACAAGCACCACCCACAAATAGCAACCAATCAATGAACTC 2460 Query 2460 AACAGCTCAATCCGAGGTTACAACCAATGGAGAAagcagcagcagcagcagTAGCTCTGG 2519 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2461 TACAGCTCAATCCGAGGTTACAACCAATGGAGAAAGCAGCAGCAGCAG---TAGCTCTGG 2517 Query 2520 TTCATCTCCAGCAAAAAACGTACCCATTGATACAAGTGCATAGAAGGAAGAACTATACAA 2579 ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 2518 TTCATCTCCAGCAAAAAACGTACCCATTGATACAAGTGCATAGAACAAAGAAGTATACAA 2577 Query 2580 GCTTAAGCTGTTGTGCGAGCACAGGAAGCTAGAAACTTAAAATTCGTTACCCTTTAAAAA 2639 |||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||| Sbjct 2578 GCTTAAGCTGTTGTGCTAGCCCACGAAGCTAGAAACTTAAAATTCGTTACCCTTTCAAAA 2637 Query 2640 AGGTAGCTCTCAGTTTTGGTGTTGATCAGAGAGATTCACCGAGAGCCATATGTTTTATGT 2699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2638 AGGTAGCTCTCAGTTTTGGTGTTGATCAGAGAGATTCACCGAGAGCCATATGTTTTATGT 2697 Query 2700 CTCCGATGGCGAT-GGTTCC-TCTTGCAGGTGCCAAAGTGATCTTGTATGTTCGTAGACT 2757 |||||||||| || |||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct 2698 CTCCGATGGC-ATTGGTTCCCTCTTGCAGGTGTCAAAGTGATCTTGTATGTTCCTAGACT 2756 Query 2758 AAGATTCTGATGCAGACAAACa-aaaaaaaCTCAAGATTTATTTGTTTACGAGTTCTGTA 2816 |||||||||||||||||||| | ||||||||||| ||||| |||| ||||||||||| Sbjct 2757 AAGATTCTGATGCAGACAAAAACAAAAAAACTCATGATTTGTTTG----CGAGTTCTGTA 2812 Query 2817 GTGATGTGGTTTATTGTATCTGATAAAA-GAATATTACTCGAGGAGAAACCGGTTTTTGA 2875 ||||||||||| |||||||||||||||| |||| ||||| || || |||||||||||||| Sbjct 2813 GTGATGTGGTT-ATTGTATCTGATAAAAAGAATGTTACTTGAAGAAAAACCGGTTTTTGA 2871 Query 2876 TT 2877 || Sbjct 2872 TT 2873 > AT1G72960.1 | Symbols: | Root hair defective 3 GTP-binding protein (RHD3) | chr1:27446236-27450862 FORWARD LENGTH=2415 Length=2415 Score = 1234 bits (668), Expect = 0.0 Identities = 1728/2227 (78%), Gaps = 124/2227 (6%) Strand=Plus/Plus Query 172 CAGCTTATCGATGGAGATGGTGTCTTTAATGTTTCTGGGGTTGATCATTTCATCAAGGAG 231 ||||| ||||| ||||||||| | | ||||| ||| | | ||||||||||| || || Sbjct 64 CAGCTCATCGACGGAGATGGTATATACAATGTCTCTCGCATCGATCATTTCATTAAAGAT 123 Query 232 GTTAAA-TTGGAAGAATGTGGTCTTTCATATGCGGTTGTCTCGATTATGGGTCCACAAAG 290 || ||| || | ||| ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct 124 GTGAAACTT-GCAGACTGTGGCCTTTCTTATGCTGTTGTCTCTATTATGGGTCCTCAAAG 182 Query 291 TAGCGGGAAGAGTACACTCTTGAATCATTTGTTTGGAACCAACTTTA-GAGAAATGGATG 349 ||||||||| |||||||| ||||| |||||||||||||| ||||||| | || ||||||| Sbjct 183 TAGCGGGAAAAGTACACTATTGAACCATTTGTTTGGAACAAACTTTATG-GAGATGGATG 241 Query 350 CATT-TAGAGGAAGGTCTCAGACAACTAAGGGAATTTGGATTGCTAGATGCGCTGGTATT 408 |||| || |||||||||||||| || || || || ||| |||| ||||| || ||||| Sbjct 242 CATTCAAG-GGAAGGTCTCAGACCACAAAAGGTATCTGGCTTGCAAGATGTGCCGGTATA 300 Query 409 GAGCCTTGCACCGTTGTGATGGATTTAGAGGGTACCGATGGGAGAGAGCGTGGTGAGGAT 468 |||||||||||| |||| |||||||||||||| |||||||| |||||||| || |||||| Sbjct 301 GAGCCTTGCACCCTTGTAATGGATTTAGAGGGCACCGATGGCAGAGAGCGAGGAGAGGAT 360 Query 469 GATACTGCTTTCGAGAAACAGAGTGCTCTTTTTGCACTTGCTGTCTCAGACATAGTTCTT 528 ||||| || ||||| ||||||||||||||||| || |||||| |||| || || | |||| Sbjct 361 GATACGGCATTCGAAAAACAGAGTGCTCTTTTCGCTCTTGCTATCTCTGATATCG-TCTT 419 Query 529 -ATCAACATGTGGTGTCATGATATTGGTCGGGAACAAGCAGCAAATAAACCTCT-TTTAA 586 ||||||||||||||||| || ||||| || |||||||| || ||||||||||| || || Sbjct 420 GATCAACATGTGGTGTCACGACATTGGCCGTGAACAAGCTGCTAATAAACCTCTCTTGAA 479 Query 587 AGACTGTGTTCCAGGTTATGATGCGGTTGTTTAGTCCGCGGAAGACAACTTTGATGTTTG 646 | ||||| || ||||| |||||||| ||||||||||| || || ||||| || |||||| Sbjct 480 A-ACTGTCTTTCAGGTGATGATGCGATTGTTTAGTCCACGTAAAACAACAATGCTGTTTG 538 Query 647 TTATAAGAGATAAAACACGGACGCCACTGGAAAATTTAGAACCAGTGC-TGAGGGAAGAC 705 | ||| |||||||||| ||||| || ||||||||||||| || || | | || ||||| Sbjct 539 TAATACGAGATAAAACCCGGACACCGTTGGAAAATTTAGAGCCTGT-CTTAAGAGAAGAT 597 Query 706 ATTCAAAAGATATGGGATTCAGTCCCCAAGCCTCAGGCACACAAAGAAACTCCACTTAGT 765 ||||| |||||||||||||| || || |||||| | |||||||| |||||||| || ||| Sbjct 598 ATTCAGAAGATATGGGATTCTGTTCCAAAGCCTGAAGCACACAAGGAAACTCCTCTAAGT 657 Query 766 GA-TTTCTTCAATGTTGAAGTAGTTGCTCTCTCGAGTTATGAAGAAAAGGAAGAACAGTT 824 || ||| |||||||||||||| |||||||| || |||||||| || |||||||||||||| Sbjct 658 GACTTT-TTCAATGTTGAAGTTGTTGCTCTTTCCAGTTATGAGGAGAAGGAAGAACAGTT 716 Query 825 CAAAGAGCAGGTCT-ATAATTTGAGACAACGGTTCTTCCAATCTGTTGCACCTGGCGGGC 883 ||||||||| | | || |||||||||||||||| | || ||| ||||||| || || | Sbjct 717 TAAAGAGCAGAT-TGCTAGTTTGAGACAACGGTTCATGCATTCTATTGCACCGGGAGGTC 775 Query 884 TTGCTGGTGATC-GACGAGGAGTTG-TCCCTGCC-AATGCTTTTGCTTTTAGTGCAAAAC 940 ||||||| || | || |||||| || | || ||| | | |||||| ||||||||| | | Sbjct 776 TTGCTGGAGA-CAGAAGAGGAG-TGATTCCAGCCTCA-GGTTTTGCATTTAGTGCAGATC 832 Query 941 AGATGTGGCA-AGTCATTAAAGACAACAAAGA-CTTGGATCTTCCAGCACACAAGGTCAT 998 |||| ||| | |||||| ||||| || || || ||| || |||||||| ||||||||||| Sbjct 833 AGATCTGG-AGAGTCATCAAAGAGAATAAGGATCTT-GACCTTCCAGCCCACAAGGTCAT 890 Query 999 GGTAGCAACTGTGCGATGCGAGGAAATTGCCAATGA-AAAATT-CTCTAGTTTTATCGCG 1056 ||| || |||||||| ||||| |||||||| ||||| || || | | | ||| || | Sbjct 891 GGTGGCTACTGTGCGGTGCGAAGAAATTGCAAATGAGAAGTTTGCGC-A-TTTCATTACA 948 Query 1057 AATGAGAATTGGCGCGAGTTGGAAGAGGCTGTAC-AGTCTGGTCCTGTTTCCGGA-TTTG 1114 || ||| | |||||| | |||| |||| || | || | ||||| |||| | | |||| Sbjct 949 AACGAGGACTGGCGCAAACTGGATGAGGAGGTGCAAG-CCGGTCCAGTTT-CTAATTTTG 1006 Query 1115 G-AAGAAAGCTGAACT-CAATTCTCCAATCCAGCTTATCAGAGTATGACACAGAAGCTAC 1172 | ||| | ||| ||| | |||||| || |||||||||| |||||| || ||||| Sbjct 1007 GAAAG-AGGCT-TACTACCATTCTCGGTTCTTGCTTATCAGAATATGACGGGGAGGCTAC 1064 Query 1173 ATACTTTGAAGAAAGTGTAAGATCATCCAAGAGACAACAGC-TGCAAGAAAAG-TTATTG 1230 || ||| || ||| |||| ||||| || |||||||| |||| || |||||||| || | Sbjct 1065 ATTCTTCGATGAAGGTGTCAGATCTTCGAAGAGACAGCAGCTTG-AAGAAAAGCTT-CTC 1122 Query 1231 CAACTTGTTCAA-CCAAC-TTTCCAAGACGTGCTT-GGACATTTGAGATCTGGAGCACTT 1287 ||||||| | || ||| | ||| ||||| || || |||||| | |||| ||| |||| Sbjct 1123 CAACTTG-TGAATCCAGCGTTT-CAAGATGT-ATTGGGACATATAAGATGGGGAATACTT 1179 Query 1288 GAAAACTTCAAGAATGCTTTTGAGAAGGCCTTGAATGC--TGGAGAAGGGTTTTCATCAT 1345 ||||| || ||| | ||||||| |||| ||| | || ||| ||||||||||| ||| Sbjct 1180 GAAAAGTTTAAGGCTTCTTTTGATAAGG-CTT-TAGGCATTGGTGAAGGGTTTTCTTCAG 1237 Query 1346 C-TGCGAA-ATCCTGCGCTC-AGTCATGCAT-ATCTAAGTTTGATAAAGGA-TGTGAAGA 1400 | | | || || || | || || | ||||| | | || || ||| || || |||| || Sbjct 1238 CTTCCCAAGAT--TG-GTTCAAGGCTTGCATGACCCAA-TTCGATGAA-GAGTGTGCAG- 1291 Query 1401 G-GCTGTTATTGAACAAGCAAATTGGGATACATCTAAAACT-CGGGAAAAGCTTG-AGCG 1457 | || | ||||||||||| |||||||| ||||| |||| | ||||| ||||| | | || Sbjct 1292 GTGCCATCATTGAACAAGCCAATTGGGACACATC-AAAAGTACGGGACAAGCTAGTA-CG 1349 Query 1458 TGATATTGAAGCCCATATCTCTTCTGTCCGTG-CTGCAAAGTTGGCTGAACTGACTACTC 1516 ||| ||||| || || || || ||||| || | || | ||||| ||||||| || | || Sbjct 1350 TGACATTGAGGCTCACATTTCCTCTGTGCG-GACTTCCAAGTTATCTGAACTTACCAGTC 1408 Query 1517 TGTATGAGTCAAAACTAAATGTAGCATTATCCGGACCGGTGGAAGCTCTT-CTGGATGGG 1575 | || ||||||||| | ||| ||| ||||| | ||||||||||||| || ||||||| Sbjct 1409 TATACGAGTCAAAAGTTCATGAAGCTTTATCAGAACCGGTGGAAGCT-TTGTTGGATGGA 1467 Query 1576 GCTAATGATGAAACATGGCCAGCA-A-T-AAGAAAGCTACTTAGACGGGAAGGAGAAT-T 1631 || || |||||||| ||| |||| | | ||| ||||| | | | || ||| |||| | Sbjct 1468 GCCAACGATGAAACGTGG--AGCACAGTAAAG-AAGCTTCATCGGCGTGAAACTGAATCT 1524 Query 1632 GGCTGTCTATGGTCTCTCCG-A-CGCATTATCTGGTTTCGAAATGGACGAAGAAACACGG 1689 || || | ||| ||| | | |||||| ||||||| || ||||| ||||||||| | Sbjct 1525 -GCAGTATCTGG--ACTCAGTAGTGCATTAGCTGGTTTTGACATGGAAGAAGAAACA-AG 1580 Query 1690 AG-TAAAATGCTTGGTGA-TC-TCGAGAACTATGCACGGGGTATTGTTGAAACCAAGGCA 1746 || || |||| || || | || || | |||||| | ||| | ||||||| |||||| Sbjct 1581 AGATAGAATG-GTGAAGAGCCTTC-AGGATTATGCAAGAGGTGTCATTGAAACGAAGGCA 1638 Query 1747 AAGGAAGAGGCTG-GAAGAGTGTTGATGCGCATGAAGGATAGATTTGCTACAATCTTCAG 1805 || |||||||||| | | || |||||||| |||||||| || |||| |||||||||||| Sbjct 1639 AAAGAAGAGGCTGTG-CGGGTTTTGATGCGTATGAAGGAAAGGTTTGGTACAATCTTCAG 1697 Query 1806 CCATGATTCTGATTCAATGCCACGTGTTTGGACTGGAAAGGAGGA-CATCAGAGCAATCA 1864 ||||||||||||||||||||||||||||||||| ||||| ||||| | || ||||||| | Sbjct 1698 CCATGATTCTGATTCAATGCCACGTGTTTGGACCGGAAAAGAGGATCTTC-GAGCAATTA 1756 Query 1865 CAAAAATG-GCTCGTTCTGCATCCTTGAAGCTGCTGTCTGTTATGGCTATTATACGCTTG 1923 | ||| | ||||| ||||| ||||||||| |||| || || |||||| | || || ||| Sbjct 1757 CTAAA-TCAGCTCGATCTGCTTCCTTGAAGTTGCTCTCAGTAATGGCTGTCATTCGATTG 1815 Query 1924 GATGATGAAC-TCGATAATATTGAGAAGACATTGAC-GCTCTCTCTGTTTAATTCTACGG 1981 | ||||||| | ||||| || ||||||||| | || | | ||||| | || | || Sbjct 1816 GGGGATGAACCT-GATAACATCGAGAAGACACTAACTG-TAGCTCTGCTGGATCCAACAA 1873 Query 1982 -GCAACAATGCTACTA-GCAAGAGCATCAGCA-CAAT-TGATTCACTTGCCTCAAGCACT 2037 | || || || ||| | || ||||||| || || | |||| |||| || ||||||||| Sbjct 1874 AG-AATGATACTTCTAAGAAA-AGCATCA-CAACA-TCTGATCCACTGGCTTCAAGCACT 1929 Query 2038 TGGGA-GCAGGTTGCACCAGAAAAGA-CTTTGATCACGCCTGTGCAGTGTAAATC-ACTG 2094 ||||| | ||||| || || || || |||||||||| || ||||| |||||||| | | Sbjct 1930 TGGGATG-AGGTTCCATCATCAA-GAACTTTGATCACACCGGTGCAATGTAAATCTA-TA 1986 Query 2095 TGGAGGCAATTCAAGA-ACGAGACAGAATATACCGTTACACAGGCCATTTCTGCACAGGA 2153 ||||| || ||||||| | || ||||| ||||| || || || ||||| || |||||||| Sbjct 1987 TGGAGACAGTTCAAGACA-GAAACAGAGTATACAGTGACTCAAGCCATATCCGCACAGGA 2045 Query 2154 AGCTAACCGACGAA-ATAACAACTGGCTGCCACCTCCATGGGCAATCCTTGCCCTGGTTG 2212 || ||| | || | || |||||| | || |||||||||||||| ||||| || | | Sbjct 2046 GGCGAACAGGCGTGGA-AATAACTGGTTACCTCCTCCATGGGCAATTCTTGCATTGATCG 2104 Query 2213 TTCTTGGATTCAATGAATTTATGACTCTCTTAAGAAATCCTCTATGGCTCTTAGT-TCTT 2271 | ||||||||||| ||||| |||||||| |||||||| ||||| | |||| || || | Sbjct 2105 TCCTTGGATTCAACGAATTCATGACTCTTTTAAGAAACCCTCTCTA--TCTTGGTGTCAT 2162 Query 2272 -TTTGTGGGATACCTTATTTCCAAAGC-CTTGTGGGTGCAATTAAATATTTCAGGAGAAT 2329 ||||| | | |||| | | ||||| || |||| |||||| |||| | || |||| Sbjct 2163 GTTTGTCGCTTTCCTTCTGGCAAAAGCACT-GTGGACGCAATTGGATATCCCTGGCGAAT 2221 Query 2330 TCCGCAA 2336 ||||||| Sbjct 2222 TCCGCAA 2228 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 142975787550 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5