BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478831
Length=4415
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14172.1 | Symbols: | FUNCTIONS IN: molecular_function unkn... 5044 0.0
> AT3G14172.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein
match is: COP1-interacting protein-related (TAIR:AT1G72410.1);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source:
NCBI BLink). | chr3:4698563-4705609 REVERSE LENGTH=4505
Length=4505
Score = 5044 bits (2731), Expect = 0.0
Identities = 3096/3265 (95%), Gaps = 53/3265 (2%)
Strand=Plus/Plus
Query 1195 AAAGGATGAAGAAGAGGAAAAAAGTACGGTACAAAATGAGCCTTTAGTGAGTCAGCCTAG 1254
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1229 AAATGATGAAGAAGAGGAAAAAAGTACGGTACAAAATGAGCCTTTAGTGAGTCAGCCTAG 1288
Query 1255 ACAACTCACGAGACGGCTTAGTGTGCAGGAGAGGATCAGCATGTTTGAAAACAAGCAGAA 1314
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1289 GCAACTCACGAGACGGCTTAGCGTGCAGGAGAGGATCAGCATGTTTGAAAACAAGCAGAA 1348
Query 1315 AGAGAACTCTGGAGAGAAAACAGCTGTGGCAAAATCTACTGAGCTGAAAAGACTTTCTTC 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1349 AGAGAACTCTGGAGAGAAAACAGCTGTGGCAAAATCTACTGAGCTGAAAAGACTTTCTTC 1408
Query 1375 TGATATATCATCTTCTGCAAGCATGGAAAAGGTTGTGGTACGAAGATGGAGTGGTGCTAG 1434
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1409 TGATTTATCATCTTCTGCAGGCATGGAAAAGGTTGTGGTACGAAGATGGAGTGGTGCTAG 1468
Query 1435 TGACATGAGCATTGATTTGGGAAATGACAGGAAGGATGATACTGGTGATAGTCCACTGTG 1494
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1469 TGACATGAGCATCGATTTGGGAAATGACAGGAAGGATGATACGGGTGATAGTCCACTGTG 1528
Query 1495 CACTCCCTCGGCATCTTCAGTGTCCAAAGATGGAAGTGGTGCATCCTCGAAACAATTTGT 1554
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1529 CACTCCCTCGTCATCTTCAGTGTCCAAAGATGGAAGTGGTGCATCCTCAAAACAATTTGT 1588
Query 1555 CGGCTACAACAAAAAAGAGCAGAATGGATTGAGCCATGCTGCGAATCCTCCTAGGAATGA 1614
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1589 CGGCTACAATAAAAAAGAGCAGAATGGATTGAGCCATGCTGCGAATCCTCATAGGAATGA 1648
Query 1615 GGAAGAATGTACTTCCAACAATGGTCGTGACTGGGGAATGGATGAAGTAGAGTCTCAAAA 1674
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1649 GGAAGAATGTACTTCCAACAATGGTGGTGACTGGGGAATGGATGAAGTAGAGTCTCAAAA 1708
Query 1675 TTCAAGTTCTACATTCTTACGAAAAGACAAGGAGGTAGACTTGAAAGTGCCATTGAGCAA 1734
|||||||||||| ||||||| ||||||||||||||||||||||| |||||||| || ||
Sbjct 1709 TTCAAGTTCTACTTTCTTACCCAAAGACAAGGAGGTAGACTTGAATGTGCCATTTAG-AA 1767
Query 1735 -GAATAATCAAGTGAGACATCAAGGAAATTCTCTGGATGGATATTTGGAGAAGAATTCCA 1793
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 1768 CGAATAATCAAGTGAGACATCAAGGAAATTCTCCGGATCGATATTTGGAGAAGAATTCCA 1827
Query 1794 AGTATAAATTCCATGAGAAGAATTCCAGAGCCACTTCAGATTACACAGGGAATGCAAATA 1853
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 1828 AGTATAAATTCCATGAGAAGAATCCCAGAGCCAGTTCAGATTACACAGGGAATGCAAATA 1887
Query 1854 TAAATGATGATGCGAACAACCAAATGAGCGATTTTATATCAAACAGGCAGAACCAGATAC 1913
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1888 TAAATGATGATGCGAACAACCAGATGAGCGATTTTATATCAAACAGGCAGAACCAGATAC 1947
Query 1914 AGTTTAGGGATCCTCAGAGCCATTCATTTTCTACATTACAGCAGTTAGGTGGTACTGAAC 1973
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1948 AGTTTAGGGATCCTCAGAGCCATTCATTGTCTACATTACAGCAGTTAGGTGGCACTGAAC 2007
Query 1974 CTAATATCACAAGTGTTCAGAGCAATGGAGGAACTGCGGAGTCTCCTAGGAAAGAACTAA 2033
||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 2008 CTATTATCACAAGTGTTCAGAGCAATGGAGTAACTGCGGAGTCTCCGAGGAAAGAACTAA 2067
Query 2034 TGCCTTCGGATAGGCAATCACCAGTTCTTGAGGATCGCCAGAGAAAGACAGCGGTTTATG 2093
||||||||||||||||||||||| |||||||||||||||||||||||||| || ||| ||
Sbjct 2068 TGCCTTCGGATAGGCAATCACCACTTCTTGAGGATCGCCAGAGAAAGACACCGTTTTCTG 2127
Query 2094 GAGGTTCTGAACAGATGAAAAGGCCGCATAGTAGAAGAACTGATATTGGTTCTGCTGCTG 2153
|||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||
Sbjct 2128 GAGGTTCTGAACAGATGAAAAGGCCGCATAGTAGAAGACCTGAAATGGGTTCTGCTGCTG 2187
Query 2154 TAAATACAAAGCCATCTGCAGCCATTAATAGTGTTTCAGATATCTCCGAGAGTGATACTC 2213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2188 TAAATACAAAGCCATCTGCAGCCATTAATAGTGTTTCAGATATCTCCGAGAGTGATACTC 2247
Query 2214 TGAACCAATTGTCTCCAACAGAGCAAGTTCAATGGGCAAGACCGTCTAAGGGAAGTCAAG 2273
||| |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 2248 TGATCCAAGTGTCTCCAACAGAGCAAGTTCAAAGGGCAAGGCCGTCTAAGGGAAGTCAAG 2307
Query 2274 AGCTGAATGACGAATTGAAAGTGAAAGCAAACGAGCTTGAAAAGCTATTTGCTGAACATA 2333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2308 AGCTGAATGACGAATTGAAAGTGAAAGCAAACGAGCTTGAAAAGCTATTTGCTGAACATA 2367
Query 2334 TGCTCCGTGTGCCGGGGGATCAAACCAGTTCTGTCCGTAGAGGTAAGCCCGGAAAGCCAA 2393
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2368 TGCTCCGTGTGCCTGGGGATCAATCCAGTTCTGTCCGTAGAGGTAAGCCCGGAAAGCCAA 2427
Query 2394 GTGAACAGGCTGTGACTTCACAGCTGAGAAGGCCTGTAGCGCAGGATCTATCATCTGTTC 2453
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2428 GTGAACAGGCTGTGACTTCACAGTTGAGAAGGCCTGTAGCGCAGGATCTATCATCTGTTC 2487
Query 2454 AAATTTCTGATCAGAAGACCCTGGCAATGCCAACTTTAACCTCAAACGATGAAGACAAGT 2513
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2488 AAATTTCTGATCAGAAGACCCTGGCAATGCCAACTTTAACCTCCAACGATGAAGACAAGT 2547
Query 2514 TCAAAACTCCGCCAACAA--A-GATGGTTGTTAACAATGAATATGGAGATACCACGAGGC 2570
|||||||||||||||||| | ||||||||||| ||| || |||||||||||||||||||
Sbjct 2548 TCAAAACTCCGCCAACAATGAAGATGGTTGTTACCAAAGACTATGGAGATACCACGAGGC 2607
Query 2571 AAAATTTTCCAGAAATCAGCTTTTCGGATAATTCTAGAGGAAAGTTCTATGAGAAATATA 2630
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 2608 AAAATTTTCCAGAAATCAGCTTTTCTGATAATTCTAGAGGAAAGTTCTATGAGCAATATA 2667
Query 2631 TGCATAAAAGAGACGCAAAGCTAAAGGAAGACTGGAGTTGCAGAAGGACCGAGAAGGAAG 2690
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2668 TGCAGAAAAGAGACGCAAAGCTGAAGGAAGACTGGAGTTGCAGAAGGACCGAGAAGGAAG 2727
Query 2691 CCAAATTGAAGGTGATGCAAGATATACTTGATCGCAGTAACGCTGAGATGAAATCCAAAT 2750
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2728 CCAAATTGAAGGTGATGCAAGATATACTTGATCGCAGTAACGCTGAGATGAAAACCAAAT 2787
Query 2751 TTTCTCAGTCTACAGGGAGACGTGATTCAAATGTCCGACGTGCAGAGAAGCTTGTATACT 2810
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 2788 TTTCTCAGTCTACAGGGAGACGTGATTCAAGTGCCCGACGTGCAGAGAAGCTTGTATACT 2847
Query 2811 TCAATTCTAAGTTGAGTGCAAAAAAGGATCAGCATCCAATTAGCTCATTTCAGAGTGAAG 2870
||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
Sbjct 2848 TCAATTCTAAGTTGAGTGCCAAAAAGGATCAGCATCCAATTAGTTCATTTCAGAGTGAGG 2907
Query 2871 AAGATGAGGATGGTTCCAGGATCACCCAAAATAAAAAGCTACAACAAAATAAAAACAATT 2930
||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||
Sbjct 2908 AAGATGAGGATGGTTCCAGGAGCACCCAGAATAAAAAGCTACAACAAAATAAAAATAATT 2967
Query 2931 TATTGACTGCTCGAACCACTGCTACATCAGCGTCACGCTCGGCAGCCAAAGTTTCTACTC 2990
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2968 TATTGATTGCTCGAACCACTGCTACGTCAGCGTCACGCTCGGCAGCCAAAGTTTCTACTC 3027
Query 2991 CCAGTGCTGTTAGGCGGAGAGGACAATCAGAAAAAC-TTCTTGCACAGTCAGTCCCTAAC 3049
||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||
Sbjct 3028 TCAGTGCTGTTAGGCGGAGAGGGCAATCAGAAAAACATT-TTGCACAGTCAGTCCCTAAC 3086
Query 3050 TTCTCCGAGATCAAAAAGGAAGGTATGAAACCAGCCTCGGGAGTTGGAAAAAATGGTGTC 3109
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 3087 TTCTCCGAGATCAAAAAGGAGGGCATGAAACCAGCCTCGGGAGTTGGAAAAAATGGTGTC 3146
Query 3110 CGCACCCAGGTGAGAAGCTCTATCCGCTCAAAAGCTGTAAATGAAGAAGAGAAGTTGCGA 3169
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 3147 CGCACCCAGGTGAGAAGCTCTATCCGCCCAAAAGCTGTAAATGAAGAAGAAAAGTTGCGA 3206
Query 3170 AGGCCGAAATTTTTCAGAAAAGGTGCTGCTGA-G-T--TG-G----CTACAGACTTTTCT 3220
||||||||| |||||||||||||||||||||| | | || | ||||||||||||||
Sbjct 3207 AGGCCGAAAATTTTCAGAAAAGGTGCTGCTGAAGCTGCTGAGTTGGCTACAGACTTTTCT 3266
Query 3221 CAATTGAAGTCAGAGGATGGTGTCTCTGTACCTCTGTATCTTGAACAGGAGCAAAGCGGG 3280
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3267 CAATTGAAGTCAGAGGATGGTGTTTCTGTACCTCTGTATCTTGAACAGGAGCAAAGCGGG 3326
Query 3281 AGAAGTTTTAACAATCATGGCATTGGTATCAGCTCTGATAATGCGCAGCTAAAGGCTTCA 3340
|||| |||||| | |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3327 AGAAATTTTAATAGTCATGGCACTGGTATCAGCTCTGATAATGCGCAGCTAAAGGCTTCA 3386
Query 3341 GAAGGATCTGAGGAATCAGATGATATGGAGAAAGAGGGGATGGGAGAAGTGCTTGATGAC 3400
|||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3387 GAAGAATCTGAGGCATCAGATGATATGGAGAAAGAGGGGATGGGAGAAGCGCTTGATGAC 3446
Query 3401 ACGGAAGTTGAAGCTTTTACTGATGCAGAAATTGAGATGCCAAGACTAAGTCAGGAGTCT 3460
|| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 3447 ACAGAAGTTGAAGCTTTTACTGATGCAGAAAACGAAATGCCAAGACTAAGTCAGGAGTCT 3506
Query 3461 GAAGAATGGGGTAGTACTGGGGTTGCAAATGGTGAATCTTTTTCTCAGCTTGAAC-CTGG 3519
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 3507 GAAGAATGGGGTAGTACTGGGGTTGCAAATGGTGAATCTTTTTCTCAGCTTGA-CGCTGG 3565
Query 3520 TTTAAATGCTGAATTACCTGCTGCTATGGCTTCTAGGCATCAAACCATGGGTTCAATCCT 3579
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3566 TTCAAATACTGAATTACCTGCTGCTATGGCTTCTAGGCATCAAACCATGGGTTCAATCCT 3625
Query 3580 GGACTCACCCGGTGGAAGCAC-AGGTCCATGGAATTCGCGAGTGAAGCATCGATATGCAA 3638
|||||||||||||| |||||| || |||||||||||| |||||||||||||||||| |||
Sbjct 3626 GGACTCACCCGGTGAAAGCACTAG-TCCATGGAATTCCCGAGTGAAGCATCGATATCCAA 3684
Query 3639 ACGAGGCATCTGAACTTGATGCTTCAGTGGACTCTCCAGTGGGTAGTCCTGCTTTTTGGA 3698
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 3685 ACGAGGCATCTGAACTTGATGCTTCAGTGGACTCTCCAGTTGGTAGTCCTGCTTTCTGGA 3744
Query 3699 ACTTCTCTTCCCTTAACCAGACAGAGAACGATACAACTCAAATGAGAAAGAAATGGGGAG 3758
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 3745 ACTTCTCTTCCCTTAACCATACAGAGAGCGATACAACTCAAATGAGAAAGAAATGGGGAG 3804
Query 3759 CTGCTCAGAAACGCGTTGCTGGTGGTAATCCATCTCAAAGTCAGT-CACAACAGGATGTG 3817
||||||||||||||| ||||||||||||||||||||||| ||||| | ||||| ||||||
Sbjct 3805 CTGCTCAGAAACGCGCTGCTGGTGGTAATCCATCTCAAAATCAGTGC-CAACAAGATGTG 3863
Query 3818 ACAAAAGGGTTGAAAAGGCTTTTAAATTTTGGAAGGAAAAACCGTGCGGCTGAGAGTTTG 3877
||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 3864 ACAAAAGGGTTGAAAAGACTTTTGAATTTTGGAAGAAAAAACCGTGCGGCTGAGAGTTTG 3923
Query 3878 GCTGACTGGATATCCACTACAACATCTGAAGGGGATGATGATACTGACGATGGAAGAGAT 3937
|||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||
Sbjct 3924 GCTGACTGGATATCTGCTACGACGTCTGAAGGGGATGATGATACTGATGATGGAAGAGAT 3983
Query 3938 CTTGCAAATCGATCATCAGAAGACTTGAGAAAGTCGCGAATGGGATTCTTGCAGAGCCAC 3997
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3984 CTTGCAAATCGATCATCAGAAGACTTGAGAAAGTCGAGAATGGGATTCTTGCAGAGCCAC 4043
Query 3998 CCCTCTGGTGATAGCTTCAACGAGAGCGAGCTATTCAGTCAACATGTCCAAACCACTGGC 4057
||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||
Sbjct 4044 CCCTCTGGTGATAGCTTCAACGAGAGCGAGCTATTCACTGAACACGTCCAAACCACTGGC 4103
Query 4058 GCACCATTGAGCTTTAAACTGAAGGAGGATCAGACGTCAGGAACTTCTGTAAAAGCACCA 4117
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 4104 ACACCATTGAGCTTTAAACTGAAGGAGGATCAGACGACAGGAGCTTCTGTAAAAGCACCA 4163
Query 4118 AGGTCATTCTTTTCACTCTCCAATTTTCGTAGCAAAGGGAAATGATTCGAGACCAAAGAT 4177
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4164 AGGTCATTCTTTTCACTCTCCAATTTTCGTAGCAAAGGGAAATGATTCGAAACCAAAGAT 4223
Query 4178 TCACTACAGAAGG--TCAGGATCCAAGCGAATGAAAGGTAA-AAA-----A--G-A--CA 4224
||| |||||||| |||||||||||||||||||||||||| ||| | | | ||
Sbjct 4224 TCATTACAGAAGTCATCAGGATCCAAGCGAATGAAAGGTAACAAATTCGCAATGCAGGCA 4283
Query 4225 C----GA---G--TATATAAGTGAAATGTTCGGTGATAC-CAATGTGCTCTCTGTTTCCG 4274
| || | |||||||||||||||||||| ||| | ||||||||||| |||||| |
Sbjct 4284 CAACAGACACGAGTATATAAGTGAAATGTTCGGAGAT-CGCAATGTGCTCTTTGTTTCGG 4342
Query 4275 ATCAATGTATCATTGAGAATAGTCCCTCT-T-C--TCTTTCTTTGTTAACTTTCTGAAGC 4330
||||||||||||||||||||||||||||| | | | |||||||||||||||||||||||
Sbjct 4343 ATCAATGTATCATTGAGAATAGTCCCTCTCTTCAATATTTCTTTGTTAACTTTCTGAAGC 4402
Query 4331 CTACATTGTAAAATGTAAATTGTATCAAAACTTAAACATGTCTTAATCGATGTGATTTTG 4390
||||||||||||||||||||||||||||| || ||||||||| | ||||||||||||||
Sbjct 4403 CTACATTGTAAAATGTAAATTGTATCAAACCTGAAACATGTC--A-TCGATGTGATTTTG 4459
Query 4391 GTAGTACACTACAAACAAACAAAAA 4415
||||||||||||||||||||| |||
Sbjct 4460 GTAGTACACTACAAACAAACAGAAA 4484
Score = 1807 bits (978), Expect = 0.0
Identities = 1141/1215 (94%), Gaps = 30/1215 (2%)
Strand=Plus/Plus
Query 1 GTGATTTTTGTCTGAAGAACGTTTtctctctctctctctctctcttgatttcactttctc 60
||||||||||||||||||||| | | | | | ||| | ||||||||||||||||||||
Sbjct 1 GTGATTTTTGTCTGAAGAACG---T-T-TAT-T-TCT-T-TCTCTTGATTTCACTTTCTC 51
Query 61 tctctAAAGTAG-TTTTTGACAAAGATAGATTACGGCGGAAGGAAGGAGACACAGAATGA 119
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 52 TCTCTAAAGTAGATTTTTGACAAAGATAGATTACGGCGGAAGGAAGGAGACACACAATGA 111
Query 120 TGGGAGAGAAATTGAATCCATCAGCGGAAGTG-AATTAAATACGAAGTTGACTTGAGAGT 178
||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 112 TGGGAGAGATATTGAATCCATCAGCGGAAGTGAAATTAATTACGAAGTTGACTTGAGAGT 171
Query 179 TTTGAGTGAAGCCAAAAACAGAAG-AAACAATCTCCATTGTTA-GG---------GCTTT 227
|||||||||||||||||||||||| ||||||||| |||||||| || |||||
Sbjct 172 TTTGAGTGAAGCCAAAAACAGAAGAAAACAATCTTCATTGTTAGGGTTTTAATAAGCTTT 231
Query 228 AAGAAGAGGATGCTGAGTATAGAAAGCAGAGAAAGAGA-CTCGACAATGATAGTTACTAT 286
|||||||||||||||| ||||||||||||||||||| | ||||||||||||||| |||||
Sbjct 232 AAGAAGAGGATGCTGAATATAGAAAGCAGAGAAAGA-ATCTCGACAATGATAGTAACTAT 290
Query 287 TCGAATGTGAATCTGAAAGAGACTGATTCATCGGAAACAGACGAAGATCTCA-TTTGTTT 345
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 291 TCGAATGTGAATCTGAAAGAGACTGATTCATCGGAAACAGACGAAGATCTCATTTTGTTT 350
Query 346 GGTA-TGTGAAGGGGGGAGACT-AAAGATTTTGTGCAAAGGGGAGAAGATGAGACCAGCT 403
|| | | |||||| ||||| ||| |||||||| ||||||| |||||||||||||||
Sbjct 351 -CTATTCT-CAGGGGGAAGACTGAAA-ATTTTGTGTAAAGGGGTCAAGATGAGACCAGCT 407
Query 404 ATACCACTTGACTATGCTGTCTTCCAACTCTCCCCAAAGCGGTCAAGATGTGAATTGTTT 463
||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 408 ATACCTCTTGATTATGCTGTCTTCCAACTCTCTCCAAAGCGGTCAAGATGTGAATTGTTT 467
Query 464 GTCTCTACTGCGGGGAGTACTGAGAAACTTGCTTCTGGACTGGTAAAACCATTTGTTGCT 523
|| |||||| |||| | ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 468 GTATCTACTACGGGAAATACTGAGAAACTTGCTTCTGGACTGGTGAAACCATTTGTTGCT 527
Query 524 CATTTGAAAGTTGCAGAAGAACAGGTCGCCCGGGAAGTTCAGTCTATCAGGCTAGAAGTT 583
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 528 CATTTGAAAGTTGCAGAAGAACAGGTTTCCCGGGAAGTTCAGTCTATCAGGCTAGAAGTT 587
Query 584 GAAAGTAACAAAAATGCTGGGACCTGGTTTACGAAAGGGACCCTTGAAAGGTTTGTACGC 643
||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 588 GAAAGCAACAAAAATGCTGGAACCTGGTTTACGAAAGGGACCCTCGAAAGGTTTGTACGC 647
Query 644 TTTGTCAGTACCCCAGAGGTTCTGGAATTGGTTAGTGCTTTGGACGTGGAAATGTCTCAG 703
||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 648 TTTGTTAGTACCCCAGAGGTTCTGGAATTGGTTAGCGCTTTGGATGTGGAAATGTCTCAG 707
Query 704 TTGGAGGCTGCCCGGAAAATATATGGCGAGGGGACTGGTGATCAGCGATCTAGTGCAAAA 763
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 708 TTGGAGGCTGCTCGGAAAATATATGGCGAGGGGACTAGTGATCAGCGATCTAGTGCAAAA 767
Query 764 GATGGCACAGAAACTACACCAGCTGCTGATGTGACAAAAAAGGAGTTACTGAAAGCTATT 823
||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 768 GATAGCACAGATACTACTCCAGCCGCTGATGTGACAAAAAAGGAGTTACTGAAAGCTATT 827
Query 824 GATTTACGGCTAGCAGCAGTTAGACAGGACTTAGCAACTGCCTGTAATCGTGCTTCGGCT 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 828 GATTTACGGCTAGCAGCAGTTAGACAGGACTTAGCAACTGCCTGTAATCGTGCTTCGGCT 887
Query 884 GCTGGATTCAACCCTATCACTGTCTCCGAACTTAGTCAGTTTGCTGATCGATTTGGCGCC 943
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 888 GCTGGTTTCAACCCTATCACTGTCTCCGAACTTAGTCAGTTTGCTGATCGATTTGGGGCC 947
Query 944 AATCGCTTGAATGAAGCATGCACCAAGTTTATAACACTTTGTCAGAGAAGGCCAGAGCTT 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 948 AATCGCTTGAATGAAGCATGCACCAAGTTTATAACACTTTGTCAGAGAAGGCCAGAGCTT 1007
Query 1004 ATGAGCTCTTGGAGGGTCAATCAGGAAGAAGAAGCGATACGTTTGTCATGGGAATCTGAT 1063
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1008 ATGAGCTCTTGGAGGGTCAATCAGGAAGAGGAAGCGATACGTTCGTCATGGGAATCTGAT 1067
Query 1064 ATGTCAATTGATGATCCCAGTGAAGACCCATCTAGAGACCTGGCGACAAACAGAAACCAA 1123
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1068 ATGTCAATTGATGATCCCAGTGAAGACCCATCTAGAGACCTGGCGACAAATAGAAACCAA 1127
Query 1124 CAACATAGGGAATATCAAACTGGTATGGAAGAGCAAAGCGCAACAGGAACCAACTACTGT 1183
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1128 CAACACAGGGAATATCAAACTGGTATGGAAGAGCAAAGCGCAACAGGAACCAGCTACTGT 1187
Query 1184 CAACAAGAATCAAAG 1198
||||| |||||||||
Sbjct 1188 CAACATGAATCAAAG 1202
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 220132545884
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5