BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478847
Length=2074
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14310.1 | Symbols: ATPME3, PME3 | pectin methylesterase 3 |... 3064 0.0
AT1G53830.1 | Symbols: ATPME2, PME2 | pectin methylesterase 2 |... 1136 0.0
> AT3G14310.1 | Symbols: ATPME3, PME3 | pectin methylesterase 3
| chr3:4771902-4775119 REVERSE LENGTH=2115
Length=2115
Score = 3064 bits (1659), Expect = 0.0
Identities = 1977/2122 (93%), Gaps = 56/2122 (3%)
Strand=Plus/Plus
Query 1 ATCATCACTCACCAGTGTCAAACAATGGCACCATCAATGAAAGAAATCTTTTC--CA-AT 57
|||||||||||| |||||| ||||||||||||||||||||||||||| ||||| | ||
Sbjct 1 ATCATCACTCACTAGTGTCGAACAATGGCACCATCAATGAAAGAAATTTTTTCTAAAGAT 60
Query 58 AATTTCAAGAAAAACAAGAAACTTATTTTGCTATCCGCCGCCGTAGCTTTGCTCCTCGTA 117
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 61 AATTTCAAGAAAAACAAGAAACTTGTTTTGCTATCCGCCGCCGTAGCTTTGCTCTTCGTA 120
Query 118 GCCGCCGTCGCCGGAATCTCCGCCGGAGCTTCAAAATCCAACGAAAAACGAACTCTATCC 177
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 121 GCCGCCGTCGCCGGAATCTCTGCCGGAGCTTCAAAAGCCAACGAAAAACGAACTCTATCC 180
Query 178 CCGTCGTCTCACGCCGTGCTAAGATCCTCCTGCAGCTCCACGCGTTACCCTGAGCTCTGT 237
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 181 CCGTCGTCTCACGCCGTGCTAAGATCCTCATGCAGCTCCACGCGTTACCCTGAGCTCTGT 240
Query 238 ATCTCCGCCGTGGCAAATACCGGCGGCGTCGAGCTAACGTCGCAAAAAGACGTCATCGAG 297
||||| ||||||| || | ||||||||||||||||||||||||||||||| |||||||||
Sbjct 241 ATCTCTGCCGTGGTAACTGCCGGCGGCGTCGAGCTAACGTCGCAAAAAGATGTCATCGAG 300
Query 298 GCATCGCTGAACCTTACAATAATCGCCGTGGAGCACAATTACTTCAACGTGAAGAAGCTG 357
|||||| ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 301 GCATCGGTGAACCTAACAATAACCGCCGTGGAGCACAATTACTTCACCGTGAAGAAGCTG 360
Query 358 ATCAAGAAGAGAAAAGGACTAACGCCGCGCGAAAAGACAGCGCTTCATGACTGTTTGGAG 417
||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct 361 ATCAAGAAGAGGAAAGGACTGACGCCGCGCGAGAAGACGGCGCTTCATGACTGTTTGGAG 420
Query 418 ACTATTGACGAGACGCTGGACGAGCTCCATGAAACGGTGGAAGATCTACATTTGTATCCA 477
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 421 ACTATTGATGAGACGCTGGACGAGCTCCATGAAACGGTGGAAGATCTCCATTTGTATCCA 480
Query 478 ACCaaaaaaaCTCTCCGGGAACACGCCGGAGATCTCAAAACCCTAATCAGCTCCGCCATT 537
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 481 ACCAAAAAAACTCTCCGGGAACACGCCGGAGATCTCAAAACACTAATTAGCTCCGCCATT 540
Query 538 ACCAACCAGGAGACTTGTCTCGACGGCTTCTCTCATGACGACGCCGATAAGCAAGTTCGT 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 ACCAACCAGGAGACTTGTCTCGACGGCTTCTCTCATGACGACGCCGATAAGCAAGTTCGT 600
Query 598 AAAGCCTTGTTGAAGGGTCAGATACACGTAGAGCACATGTGCAGCAACGCTCTAGCAATG 657
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 AAAGCCTTGTTGAAGGGGCAGATACACGTAGAGCACATGTGCAGCAACGCTCTAGCAATG 660
Query 658 ATCAAGAACATGACTGATACTGACATAGCCAACTTCGAGCAAAAAGCTAAAATAACCTCA 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 ATCAAGAACATGACTGATACTGACATAGCCAACTTCGAGCAAAAAGCTAAAATAACCTCA 720
Query 718 AACAACCGTAAGCTCAAGGAGGAGAATCAGGAAACTACGGTGGC---AGATATCGCCGGA 774
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 721 AACAACCGTAAGCTCAAGGAGGAGAATCAGGAAACTACGGTGGCTGTAGATATCGCCGGA 780
Query 775 GCGGGAGAACTAGACTCGGAGGGATGGCCAACTTGGTTATCCGCTGGAGATAGGAGGCTT 834
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 GCCGGAGAACTAGACTCGGAGGGATGGCCAACTTGGTTATCCGCTGGAGATAGGAGGCTT 840
Query 835 CTTCAGGGTTCGA-GTGTGAAAGCCGACGCCACCGTGGCAGCTGACGGTAGCGGTACATT 893
||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 841 CTTCAGGGTTC-AGGTGTGAAAGCTGACGCCACCGTGGCAGCTGACGGTAGCGGTACATT 899
Query 894 TAAGACGGTGGCGGCTGCGGTTGCGGCGGCCCCGGAAAATAGTAACAAGAGGTATGTGAT 953
||| || ||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 900 TAAAACTGTGGCTGCTGCGGTTGCCGCGGCCCCTGAAAATAGTAATAAGAGGTATGTGAT 959
Query 954 ACATATTAAAGCCGGGGTTTATAGAGAGAATGTGGATGTTGCAAAGAAGAAAAAGAATAT 1013
|||||| |||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct 960 ACATATAAAAGCCGGAGTTTACAGAGAGAATGTGGAGGTTGCTAAGAAGAAAAAGAATAT 1019
Query 1014 AATGTTTATGGGAGATGGTCGGACGAGAACTGTTATCACCGGAAGTCGAAACGTCGTCGA 1073
||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||
Sbjct 1020 AATGTTTATGGGAGATGGTCGGACGAGAACTATTATCACCGGAAGTCGAAACGTTGTAGA 1079
Query 1074 CGGTAGCACCACTTTCCAGTCCGCCACCGTTGCTGCTGTCGGCGAGAGATTCTTAGCTCG 1133
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 CGGTAGCACCACTTTCCACTCCGCCACCGTTGCTGCTGTCGGCGAGAGATTCTTAGCTCG 1139
Query 1134 TGACATCACTTTCCAAAACACGGCGGGTCCGTCGAAGCACCAAGCGGTGGCTCTCCGTGT 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 TGACATCACTTTCCAAAACACGGCGGGTCCGTCGAAGCACCAAGCGGTGGCTCTCCGTGT 1199
Query 1194 GGGTTCTGATTTCTCCGCCTTCTACAATTGCGACATGTTAGCTTACCAAGACACTCTTTA 1253
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 1200 GGGTTCTGATTTCTCCGCCTTCTACAATTGCGACATGTTAGCTTATCAAGACACTCTATA 1259
Query 1254 CGTCCACTCTAACCGTCAATTCTTCGTCAAGTGTATCATCGCCGGAACCGTCGACTTCAT 1313
|||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||
Sbjct 1260 CGTCCACTCTAACCGTCAATTCTTCGTCAAATGTCTCATCGCCGGAACCGTTGACTTCAT 1319
Query 1314 CTTCGGGAACGCCGCCGTCGTGCTCCAAGACTGTGACATTCACGCTCGCCGCCCCAACTC 1373
|||||| |||||||||||||||||||||||||||||||| |||||||||||||| || ||
Sbjct 1320 CTTCGGAAACGCCGCCGTCGTGCTCCAAGACTGTGACATCCACGCTCGCCGCCCTAATTC 1379
Query 1374 CGGCCAGAAAAACATGGTCACGGCTCAGGGAAGAACGGATCCAAACCAGAACACAGGGAT 1433
||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1380 CGGTCAGAAAAACATGGTCACAGCTCAGGGAAGAACGGATCCTAACCAGAACACAGGGAT 1439
Query 1434 CGTTATCCAGAAATGTAGGATCGGTGCCACGTCAGATTTACAGTCAGTGAAAGGTAGTTT 1493
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1440 CGTTATCCAGAAATGTAGGATCGGTGCCACGTCGGATTTACAGTCGGTGAAAGGTAGTTT 1499
Query 1494 CCCTACGTACCTTGG-TCGGCCGTGGAAGGAGTATTCGCAAACGGTGATAATGCAGTCGG 1552
|| |||||| |||| |||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct 1500 TCCGACGTAC-TTGGGTCGGCCATGGAAGGAATATTCACAAACGGTGATAATGCAGTCGG 1558
Query 1553 CTATCTCCGACGTGATCCGACCCGAAGGGTGGTCTGAGTGGACCGGGACTTTTGCGTTGA 1612
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1559 CTATCTCCGACGTGATCCGACCCGAAGGGTGGTCCGAGTGGACCGGGACTTTTGCGTTGA 1618
Query 1613 ACACTCTGACTTATAGAGAGTATGCGAATACAGGAGCAGGGGCTGGAACTGCAAATAGAG 1672
||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 1619 ACACTCTGACTTACAGAGAGTATTCGAACACAGGAGCAGGGGCTGGAACTGCAAATAGAG 1678
Query 1673 TGAAGTGGAGGGGCTTTAAAGTAATTACGGCTGCTGCTGAAGCTCAAAAATATACGGCTG 1732
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 TGAAGTGGAGGGGCTTTAAGGTAATTACGGCTGCTGCTGAAGCTCAAAAATATACGGCTG 1738
Query 1733 GTCAGTTTATTGGTGGTGGAGGCTGGTTATCGTCGACCGGTTTCCCCTTCTCGCTCGGTC 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 GTCAGTTTATTGGTGGTGGAGGCTGGTTATCGTCGACCGGTTTCCCCTTCTCGCTCGGTC 1798
Query 1793 TTTGAGAGATTGTTGTTGTGTAATGTGTTCCTACGTATTGTTGG--A------T-ATTG- 1842
|||||||||||||||| || ||||||||||||||||||||||| | | ||||
Sbjct 1799 TTTGAGAGATTGTTGT-GT--AATGTGTTCCTACGTATTGTTGGCTACAAAAATTATTGA 1855
Query 1843 T-A-T---GAAT----CAAATCGTGTTGTTCTCTTTGTTTTGTTTTGGGTTGTGTA-TTT 1892
| | | | || ||||||||||||| ||||||||||||||| |||||||||| |||
Sbjct 1856 TTAATATTGTATGAAGCAAATCGTGTTGTCCTCTTTGTTTTGTTT-GGGTTGTGTACTTT 1914
Query 1893 CTCTA--T-ATCGTAGTATTAGAAACTAGATGAAATAACGAGGATTTTTTCGCCTTGAGA 1949
||||| | ||||||||||||||||| ||||||||||| | || ||||| ||||||||||
Sbjct 1915 CTCTAGATCATCGTAGTATTAGAAACGAGATGAAATAATGCGGGTTTTTGCGCCTTGAGA 1974
Query 1950 GGAT--ATT-GCCTATCT-G--ATGATG---ATT-GACGATGA---A--ATG-ATGTCAT 1993
|| ||| | | | ||| || ||| || ||||| | ||| |||||||
Sbjct 1975 ATATGGATTTGAGAAAGGAGGGATGTTGCCTATTTGATGATGATGCATGATGGATGTCAT 2034
Query 1994 AATaaaaaaaCAAAACAAATACATGTATTT-CTATGTAACTTCTCTTTCTTTTTGTTGTC 2052
||||||||| |||| |||| |||||||||| || |||||||||||| |||||||||||||
Sbjct 2035 AATAAAAAA-CAAACCAAAAACATGTATTTTCT-TGTAACTTCTCTCTCTTTTTGTTGTC 2092
Query 2053 AACGAAATTTATGTCCATATAT 2074
||||||| ||||||||||||||
Sbjct 2093 AACGAAACTTATGTCCATATAT 2114
> AT1G53830.1 | Symbols: ATPME2, PME2 | pectin methylesterase 2
| chr1:20098522-20100889 FORWARD LENGTH=1948
Length=1948
Score = 1136 bits (615), Expect = 0.0
Identities = 1334/1675 (80%), Gaps = 74/1675 (4%)
Strand=Plus/Plus
Query 149 CAAAATCCAACGAAAA--ACGAACTCTATCCCCGTCGTCTCACGCCGTGCTAAGATCCT- 205
||||| |||| |||| || ||||||||| || | || |||||| | |||| || ||
Sbjct 178 CAAAAACCAA--AAAATCAC-AACTCTATCTTCGACATCACACGCCATTCTAAAAT-CTG 233
Query 206 CCTGCAGCTCCACGCGT-TACCCTGAGCTCTGTATCTCCGCCGTGGCAAATACCGGCGGC 264
|||||||| || | | ||||| ||||||||| | |||||||||||| ||||| ||
Sbjct 234 TTTGCAGCTCAACAC-TATACCCGGAGCTCTGTTTTTCCGCCGTGGCAGCCACCGGAGGA 292
Query 265 GTCGAGCTAACGTCGCAAAAAGACGTCATCGAGGCATCGCTGAACCTTAC-AATAATCGC 323
||||| ||||| || ||||| |||||||| || || || ||||| || | || ||
Sbjct 293 AAAGAGCTGACGTCACAGAAAGAAGTCATCGAAGCGTCACTTAACCTAACTACCAA-AGC 351
Query 324 CGTGGAGCACAATTACTTCAAC-GTGAAGAAGCTGATCAAGAAGAGAAAAGGACTAACGC 382
|||| | ||||| |||||| | || |||||||||||| |||||||||||| | || |
Sbjct 352 CGTGAAACACAACTACTTC-GCTGTCAAGAAGCTGATCGCGAAGAGAAAAGGTTTGACAC 410
Query 383 CGCGCGAAAAGACAGCGCTTCATGACTGTTTGGAGACTATTGACGAGACGCTGGACGAGC 442
|||| || || |||||||| |||||||||||||| || ||||||||| | || ||||
Sbjct 411 CGCGTGAGGTCACGGCGCTTCACGACTGTTTGGAGACAATCGACGAGACGTTAGATGAGC 470
Query 443 TCCATGAAACGGTGGAAGATCTACATTTGTATCC-AACCaaaaaaaCTCTCCGGGAACAC 501
|||| | ||||||| ||||| ||| |||||| || | ||||| |||| || ||||
Sbjct 471 TCCACGTGGCGGTGGAGGATCTTCATCAGTATCCTAAGC-AAAAATCTCTGAGGAAACAT 529
Query 502 GCCGGA-GATCTCAAAACCCTAATCAGCTCCGCCATTACCAA-CCAGGAGACTTGTCTCG 559
||| || ||||||||||| ||||||||||| |||||||| || | ||| |||||| || |
Sbjct 530 GCC-GATGATCTCAAAACACTAATCAGCTCAGCCATTACTAATCAAGG-GACTTGCCTTG 587
Query 560 ACGGCTTCTCTCATGACGACGCCGATAAGCAAGTTCGTAAAGCCTTGTTGAAGGGTCAGA 619
|||| |||||| | ||||||||||||| | |||||||||| || || ||||||||||||
Sbjct 588 ACGGTTTCTCTTACGACGACGCCGATAGGAAAGTTCGTAAGGCGTTATTGAAGGGTCAGG 647
Query 620 TACACGTAGAGCACATGTGCAGCAACGC-TCTAGCAATGATCAAGAACATGACTGATACT 678
||||||| ||||||||||| |||||||| | |||||||||||||||||||||| || ||
Sbjct 648 TACACGTGGAGCACATGTGTAGCAACGCAT-TAGCAATGATCAAGAACATGACAGAAACC 706
Query 679 GACATAGCCAACTTCGAGCAAAAAGCTAAAATAACCTCAAACAACCGTAAGCTCAAGGAG 738
|||||||||||||| |||| ||| | |||| || ||||| | | | ||| |
Sbjct 707 GACATAGCCAACTTTGAGC--TAAG---AGATAA-GTC-TTCAACCTTCA-C-CAACAAC 757
Query 739 GAGAATCAGGAAACTACGGTGGCA-GATATCGCCGGAGCGGGAGAACTAGACTCGGAGGG 797
| || | | || || | || | | || || | || | || || || | || ||
Sbjct 758 AACAA-CCGCAAGCT-C-AAGG-AGGTTACCGGC-GA-C-TTAG-AC-AG--T--GATGG 804
Query 798 ATGGCCAACTTGGTTATCCGCTGGAGATAGGAGGCTTCTTC-AGGGTTCGAGTGTGAAAG 856
|||||||| |||||||||| |||||| || |||||||||| |||| || | | ||||
Sbjct 805 ATGGCCAAAGTGGTTATCCGTTGGAGACAGAAGGCTTCTTCAAGGG-TCAACAATTAAAG 863
Query 857 CCGACGCCACCGTGGCAGCTGACGGTAGCGGT-ACATTTA-AGACGGTGGCGGCTGCGGT 914
| ||||| || ||||| | |||||| |||||| || |||| | ||||| || || || ||
Sbjct 864 CAGACGCTACGGTGGCGGATGACGGAAGCGGTGAC-TTTACA-ACGGTAGCCGCGGCTGT 921
Query 915 TGCGGCGGCCCCGGAAAATAGTAACAAGAGGTATGTGATACATATTAAA-GCCGGGGTTT 973
|| ||||| || || || ||||||||||||| ||||||||||| |||| || || ||||
Sbjct 922 GGCTGCGGCGCCAGAGAAGAGTAACAAGAGGTTTGTGATACATA-TAAAGGCAGGAGTTT 980
Query 974 ATAGAGAGAATGTGGATGTTG-CAAAGAAGAAAAAGAATATAATGTT-TATGGGAGATGG 1031
|||||||||||||||| | || | |||||||| | |||||||||||| | ||||||||||
Sbjct 981 ATAGAGAGAATGTGGAAG-TGACGAAGAAGAAGACGAATATAATGTTCT-TGGGAGATGG 1038
Query 1032 TCG-GACGAGAACTGTTATCACCGGAAGTCGAAACGTCGTCGACGGTAGCACCACTTTCC 1090
|| | | | |||| ||||||| |||||| |||| |||||||| || |||||||||||||
Sbjct 1039 CCGTGGC-AAAACTATTATCACTGGAAGTAGAAATGTCGTCGATGGAAGCACCACTTTCC 1097
Query 1091 AGTCCGCCACCGTTGCTGCTGTCGGCGAGA-GATTCTTAGCTCGTGACATCACTTTCCAA 1149
| ||||| || |||||||| |||||||||| | ||| |||| ||||||||||| ||||||
Sbjct 1098 ACTCCGCTACTGTTGCTGCCGTCGGCGAGAGGTTTC-TAGCGCGTGACATCACATTCCAA 1156
Query 1150 AACACGGCGGGTCCGTCGAAGCACCAAGCGGTGGCTCTCCGTGTGGGTTCTGATTTCTCC 1209
||||| || |||||||||||||| ||||||||||||||||| || || || ||||| |||
Sbjct 1157 AACACCGCCGGTCCGTCGAAGCATCAAGCGGTGGCTCTCCGAGTCGGATCAGATTTTTCC 1216
Query 1210 GCCTTCTA-CAATTGCGACATGTTAGCTTACCAAGACACTCTTTACGTCCACTCTAACCG 1268
|| || || ||| ||||||||||| ||||| |||||||| ||||| |||||||| || ||
Sbjct 1217 GCTTTTTACCAA-TGCGACATGTTTGCTTATCAAGACACACTTTATGTCCACTCAAATCG 1275
Query 1269 TCAATTCTTCGTCAAGTGT-ATCATCGCCGGAACCGTCGACTTCATCTTCGGGAACGCCG 1327
||||||||| || || ||| | ||| ||||||||||||| ||||||||||| ||||| |
Sbjct 1276 TCAATTCTTTGTGAAATGTCA-CATAACCGGAACCGTCGATTTCATCTTCGGAAACGCAG 1334
Query 1328 CCGTC-GTGCTCCAAGACTGTGACATTCACGCTCGCCGCCCCAACTCCGGCCAGAAAAAC 1386
||| | || | |||||||| || || | || ||| | || || ||||| |||||||||
Sbjct 1335 CCG-CGGTTTTACAAGACTGCGATATAAATGCACGCAGACCAAATTCCGGTCAGAAAAAC 1393
Query 1387 ATGGTCACGGCTCAGGGAAGAACGGATCCAAACCAGAACACAGGGATCGTTATCCAGAAA 1446
||||| || || || ||| | | ||||| || || ||||| ||||| || ||||||||
Sbjct 1394 ATGGTTACCGCCCAAGGACGGTCTGATCCGAATCAAAACACGGGGATTGTGATCCAGAAT 1453
Query 1447 TGTAGGATCGGTGCCACGTCAGAT-TTACAGTCAGTGAAAGGTA-GTTTCCCTACGTACC 1504
||| | || |||| |||||| ||| || | | |||||||| | | ||||| ||||| |
Sbjct 1454 TGTCGTATTGGTGGCACGTCGGATCTT-TTGGCCGTGAAAGGAACG-TTCCCGACGTATC 1511
Query 1505 TTGGTCGGCCGTGGAAGGAGTATTCGCAAACGGTGATAATGCAGTCGGCTATCTCCGACG 1564
||||||| || |||||||| ||||| | |||||||||||||| |||| ||| |||||||
Sbjct 1512 TTGGTCGTCCTTGGAAGGAATATTCACGGACGGTGATAATGCAATCGGATATATCCGACG 1571
Query 1565 TGATCCGACCCGAAGGGTGGTC-TGAGTGGACCGGGACTTTTGCGTTGAACACTCTGACT 1623
|||||||||||||||| ||| | |||||||| ||||| |||||||||| ||||||| |||
Sbjct 1572 TGATCCGACCCGAAGGATGG-CATGAGTGGAGCGGGAGTTTTGCGTTGGACACTCTAACT 1630
Query 1624 TATAGAGAGTATGCGAATACAGGAGCAGGGGCTGGAACTGCAAATAGAGTGAAGTGGAGG 1683
|||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||| |
Sbjct 1631 TATAGAGAGTATTTGAATAGAGGAGGAGGGGCAGGAACTGCAAATAGAGTGAAGTGGAAG 1690
Query 1684 GGCTTTAAAGTAATTAC-GGCTGCTGCTGAAGCTCAAAAATATACGGCTGGTCAGTTTAT 1742
|||| ||| |||||||| | || | | |||||||| || ||||||||||||||||||
Sbjct 1691 GGCTATAAGGTAATTACAAG-TGATACAGAAGCTCAGCCATTTACGGCTGGTCAGTTTAT 1749
Query 1743 TGGTGGTGGAGGCTGGTTATCGTCGACCGGTTTCCCCTTCTCGCTCGGTCTTTGA 1797
||||||||||||||||||| ||||||||||||| || |||||| | ||||||||
Sbjct 1750 TGGTGGTGGAGGCTGGTTAGCGTCGACCGGTTTTCCTTTCTCGTTAAGTCTTTGA 1804
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102810716160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5