BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478852
Length=2681
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14350.1 | Symbols: SRF7 | STRUBBELIG-receptor family 7 | ch... 4069 0.0
AT1G53730.2 | Symbols: SRF6 | STRUBBELIG-receptor family 6 | ch... 1541 0.0
AT3G14340.1 | Symbols: | unknown protein; Has 1 Blast hits to ... 355 1e-96
> AT3G14350.1 | Symbols: SRF7 | STRUBBELIG-receptor family 7 |
chr3:4782757-4787236 REVERSE LENGTH=2749
Length=2749
Score = 4069 bits (2203), Expect = 0.0
Identities = 2532/2684 (94%), Gaps = 49/2684 (2%)
Strand=Plus/Plus
Query 1 TTCTTACTGATAGCAAATCGTGCTTGCCAGCTTTTTACTCGATAAATTCGTCTTATGGCT 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12 TTCTTACTTATAGCAAATCGTGCTTGCCAGCTTTTTACTCGATAAATTCGTCTTATGGCT 71
Query 61 TAAACTGTATAAAATCTAGCTTAAACAAAATTTATCCTCAAAAGTTTATTAAATTAATAA 120
||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||
Sbjct 72 GAAACTGTATAAAATCTAGCTT-ATCAAAATTTATCCTC-AAAGTTTATTAAATTAATAA 129
Query 121 TAAAAAtttttttATACAAA-TTTGGGTTTTTGCCATTTGGGTTTTCTTCTGTCTCATCT 179
||||||| | | | | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 130 TAAAAATCTCTGAAGA-AAAGTTTGGGTTTTTGCCATTTGGGTTTTCTTCTGTCTCATCT 188
Query 180 GGTTTT--agagagagagag-aagtgagaggagaaggagaaggaggaagaagatgactga 236
|||||| ||||||| |||| |||| || || |||| |||||||||||||||||||||
Sbjct 189 GGTTTTCGAGAGAGATAGAGAAAGT--GA-GACAAGGTTAAGGAGGAAGAAGATGACTGA 245
Query 237 gaaTCGGGTGGTTTTGGTTCTGCTTATACTCTGCATTGTTGGGTTTGAGCCAAGTTTCAT 296
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 246 GAATCGGGTGGTTTTGGCTCTGCTTATACTCTGCATTGTTGGGTTTGAGCCAAGTTTCAT 305
Query 297 CCATGGAGCTACAGATTCATCAGATACTTCAGCGTTAAACACCATGTTCAGCTCCATGAA 356
|||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 306 CCATGGAGCTACGGATTCATCAGATACTTCGGCGTTAAACATCATGTTCAGCTCCATGAA 365
Query 357 TTCTCCAGGACAGCTATCACAATGGACAACATCAGGAGGTGATCCTTGTGGCCAAAACTG 416
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 366 TTCTCCAGGACAGCTCTCACAATGGACAGCATCAGGAGGTGATCCTTGTGGCCAAAACTG 425
Query 417 GAAAGGCATAACTTGCTCTGGCTCAAGAGTTACTCAAATAAAGTTGTCAGGTCTTGGACT 476
|||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||||
Sbjct 426 GAAAGGCATAACTTGCTCTGGCTCTCGAGTTACACAAATAAAGTTACCAAGTCTTGGACT 485
Query 477 TTCTGGATCACTTGGATAT-ATGCTTGATAAATTGACTTCTGTTACTGAGTTTGATCTAA 535
||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | |
Sbjct 486 TTCTGGATCACTTGGAT-TCATGCTTGATAAATTGACTTCTGTTACTGAGTTTGATATGA 544
Query 536 GCAACAATAACATTGGAGGCGATTTGCCGTATCAGCTTCCTCCAAACTTGGAACGATTGA 595
||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 545 GCAACAATAACCTTGGAGGCGATTTGCCTTATCAGCTTCCTCCAAACTTGGAGCGATTGA 604
Query 596 ATCTTGCTAATAACCAGTTAACTGGATCTGCTCAATATTCCATTTCTATGATGGCACCTC 655
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 605 ATCTTGCTAATAACCAGTTCACTGGATCTGCTCAATATTCCATTTCTATGATGGCTCCTC 664
Query 656 TTAAGTACCTCAATCTTGCTCATAACCAGTTGAAGCAACTAGCTATTGACTTCACAAAAC 715
||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 665 TTAAGTACCTCAACCTTGCTCACAACCAGTTGAAGCAGCTAGCTATTGACTTCACAAAAC 724
Query 716 TCACCTCTCTCTCTATCTTGGACCTCTCTTCCAATGCTTTTACGGGGTCGCTCCCAAACT 775
|||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct 725 TCACCTCTCTCTCTATATTGGACCTCTCTTCCAATGCTTTTATAGGGTCTCTCCCAAACA 784
Query 776 CTTGTAGCTCTCTTACGAGTGCAAAATCAATTTATCTTCAGAACAATCAGTTCTCAGGCA 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 CTTGTAGCTCTCTTACGAGTGCAAAATCAATTTATCTTCAGAACAATCAGTTCTCAGGCA 844
Query 836 CCATTGATATACTAGCCACTCTTCCTCTCGAAAATCTGAATATTGCAAACAACCGATTCA 895
|||||||||| |||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct 845 CCATTGATATTCTAGCCACCCTTCCTCTCGAAAATCTGAATATTGCAAACAATCGGTTCA 904
Query 896 CAGGATGGATCCCAT-ATTCTTTGAAAGGCATTAACTTGCAAAAAGATGGTAATTTATTA 954
|||| |||||||| | |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 905 CAGGCTGGATCCC-TGATTCTTTGAAAGGCATTAACTTGCAAAAAGATGGCAATTTATTA 963
Query 955 AATTCTGGGCCTGCACCTCCACCACCTCCCGGTACACCTCCGATTAGT-AA--ATCACCT 1011
||||| ||||||||||||||||||||||| |||||||| ||||| ||| || |||||||
Sbjct 964 AATTCCGGGCCTGCACCTCCACCACCTCCTGGTACACCACCGATCAGTAAATCATCACCT 1023
Query 1012 ACTCCGAAATCCGGGAACCGT-GAAACCCGGTCCAATGGTGATTCCAGCAGTAGCAAAGA 1070
||||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||||||
Sbjct 1024 ACTCCGAAATCCGGGAACCGTGGAAA-CCGTTCCAATGGTGATTCCAGCAATAGCAAAGA 1082
Query 1071 CTCCAGCAAATCAGGGCTTGGAGCTGGTGGGA-TAGCAGGAATAGTCATTTCATTGTTAG 1129
|||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| |||
Sbjct 1083 CTCCAGCAAATCAGGGCTTGGAGCTGGT-GGAGTAGCAGGAATAGTCATTTCTTTGATAG 1141
Query 1130 TTGTAACAGCAGTCATAGCTTTCTTCTTGGTCAAGAGAAAAAGATCAAAGCGGGCATCAT 1189
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1142 TTGTAACAGCAGTCATAGCTTTCTTCTTGATCAAGAGAAAAAGATCAAAGCGGTCATCAT 1201
Query 1190 CCACGGACATTGAAAAGACTGATAATAACATTAACCAACCCATTATACTAGCGTCAAATG 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1202 CCACGGACATTGAAAAGACTGATAATAACATTAACCAACCCATTATACTAGCGTCCAATG 1261
Query 1250 GCTTTCATCATGAGAATAAGTCTGTACAGAATCCACCATTAGTTGAGACAAAGAAACTGG 1309
||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1262 ACTTTCATCAAGAGAATAAGTCTGTACAGAATCCACCATTGGTTGAGACAAAGAAACTGG 1321
Query 1310 ATACTTCATTGTCGATGAATCTACGTCCTCCACCAGCTGAGCGACATAAGTCGTTTGATG 1369
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1322 ATACGTCATTGTCGATGAATCTACGTCCTCCACCATCTGAGCGACATAAGTCGTTTGATG 1381
Query 1370 ACGATGATTCAACAATGAGAAAACCCATTGTAGCAAAGAAAGCTGCTGTTGTTGTTCCTT 1429
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1382 ACGATGATTCAACAATGAGAAAACCTATTGTTGCAAAGAAAGCTGCTGTTGTTGTTCCTT 1441
Query 1430 CAAATGTGAACACATATACGGTTGCAGATCTTCAAATAGCTACCAACAGTTTCAGCGTAG 1489
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1442 CAAATGTGAACACATATACGGTTTCAGATCTTCAAGTAGCTACCAACAGTTTCAGCGTAG 1501
Query 1490 ATAATCTTCTTGGTGAAGGGACATTTGGAAGAGTATACAGAGCTCAGTTAGAAGATGGAA 1549
|||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1502 ATAATCTTCTCGGTGAAGGAACATTTGGAAGAGTATACAGAGCTCAGTTTGAAGATGGAA 1561
Query 1550 AGGTACTTGCTGTGAAGAAAATCGACTCATCTGCGCTTCCCACGGATACGGCTGATGATT 1609
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1562 AGGTACTTGCTGTGAAGAAAATCGACTCATCTGCGCTTCCCACGGATACTGCTGATGATT 1621
Query 1610 TTACCGAAATAGTATCGAAAATAGCGCATCTGGATCACGAAAATGTCACAAAGCTTGATG 1669
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1622 TTACCGAAATTGTATCGAAAATAGCGCATTTGGATCACGAAAATGTCACAAAGCTTGATG 1681
Query 1670 GTTACTGTTCTGAACACGGGCAACACTTGGTGGTCTATGAGTTCCATAGAAACGGCTCAT 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1682 GTTACTGTTCTGAACACGGGCAACACTTGGTGGTCTATGAGTTCCATAGAAACGGCTCAT 1741
Query 1730 TGCATGACTTTTTACATCTTGCGGAAGAGGAAAGCAAACCCCTGATATGGAATCCCCGTG 1789
|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 1742 TGCATGACTTTTTACATCTTGCAGAAGAGGAAAGCAAACCGTTGATATGGAATCCCCGTG 1801
Query 1790 TCAAGATCGCTCTTGGCACTGCACGTGCATTGGAGTACTTGCATGAAGTTTGCTCTCCAT 1849
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1802 TCAAGATCGCTCTTGGCACTGCACGTGCATTGGAGTACTTGCATGAAGTTTGCTCACCAT 1861
Query 1850 CTATAGTCCACAAGAACATTAAATCAGCAAATATTTTACTTGACTCAGAGCTAAATCCGC 1909
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1862 CTATAGTCCACAAGAACATTAAATCAGCAAATATTTTACTTGACTCAGAGCTGAATCCAC 1921
Query 1910 ACCTCTCAGACTCAGGTCTCGCTAGTTTCCTTCCCACTGCAAATGAGCTACTGAATCAAA 1969
||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||
Sbjct 1922 ACCTCTCAGACTCAGGTCTCGCTAGCTTCCTTCCCACTGCAAACGAGCTACTAAACCAAA 1981
Query 1970 ACGATGAAGGATACAGTGCACCAGAAACTTCAATGTCAGGCCAATACTCTTTGAAGAGCG 2029
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1982 ACGATGAAGGATACAGCGCACCAGAAACTTCAATGTCAGGCCAATACTCTTTGAAGAGCG 2041
Query 2030 ATGTTTACAGTTTTGGAGTAGTGATGCTTGAGCTTTTAACCGGAAGAAAACCATTCGACA 2089
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2042 ATGTTTACAGTTTTGGAGTAGTGATGCTCGAGCTTTTAACCGGAAGAAAACCATTCGACA 2101
Query 2090 GCTCAAGGTCAAGATCTGAACAGTCATTGGTAAGATGGGCAACACCTCAGCTTCACGACA 2149
|| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2102 GCACAAGGTCAAGATCGGAACAATCATTGGTAAGATGGGCAACACCTCAGCTTCACGACA 2161
Query 2150 TTGATGCTTTGGGCAAAATGGTTGATCCAGCTCTCAAAGGGCTTTACCCGGTTAAATCGC 2209
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 2162 TTGATGCTTTGGGCAAAATGGTTGATCCAGCTCTCAAAGGGCTATACCCGGTTAAATCCC 2221
Query 2210 TCTCCCGATTTGCAGATGTTATCGCCCTTTGCGTTCAGCCGGAGCCAGAGTTTAGACCAC 2269
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2222 TCTCCCGATTTGCAGATGTTATCGCCCTTTGCGTCCAGCCGGAGCCAGAGTTTAGACCAC 2281
Query 2270 CGATGTCTGAAGTGGTGCAAGCGCTGGTTGTATTGGTGCAGAGAGCTAACATGAGCAAGA 2329
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2282 CCATGTCTGAAGTGGTGCAAGCATTGGTTGTATTGGTGCAGAGAGCTAACATGAGCAAGA 2341
Query 2330 GAACTGTCGGAGCCGGCTCCGGTAGCTCCGGCGTCAATGATTACATGTAAATTCTTTACC 2389
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2342 GAACTGTTGGAGTCGGCTCCGGTAGCTCCGGCGTCAATGATTACATGTAAATTCTTTACC 2401
Query 2390 TGATGAGAACCAACGAAGGAAAACATAAAAATTTGCCCTTTT-CTCTTGTCTTG-TCGGA 2447
|||||||||||||| || ||||||||||||||||||||||| ||||||||| | |||||
Sbjct 2402 TGATGAGAACCAACAAAAAAAAACATAAAAATTTGCCCTTTTTCTCTTGTCT-GCTCGGA 2460
Query 2448 TTCTGGGTCGGACGACAACAAGTGa-aa---a--a-a-a-aa--CAAAA-----TCCttt 2491
||||| | |||||||||||||||| || | | | | || ||||| ||||||
Sbjct 2461 ATCTGGATGGGACGACAACAAGTGACAACCGAGGACAGACAAAACAAAACAAAATCCTTT 2520
Query 2492 tttttttttGGTTTCATAAAACTGATGA-GAGA-A-TAACAACACAGCAAACCCTTCACG 2548
|||| ||| ||||||||||||||||||| |||| | |||||||| | ||| |||||||||
Sbjct 2521 TTTTCTTTCGGTTTCATAAAACTGATGATGAGAGAATAACAACA-A-CAA-CCCTTCACG 2577
Query 2549 CATTGTACACTCCCATGTTTCTTTGTAATTTGTTCCCAATTTGTAGCTTTTTT---AGAT 2605
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2578 CATTGTACACTCCCATGTTTCTTTGTAATTTGTTCCCAATTTGTAGCTTTTTTTTTAGAT 2637
Query 2606 TCCGACAACATGAACAAAACCATCCCCTTTTGTGAGTTCCGATC 2649
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2638 TCCGACAACATGAACAAAACCATTCCCTTTTGTGAGTTCCGATC 2681
> AT1G53730.2 | Symbols: SRF6 | STRUBBELIG-receptor family 6 |
chr1:20061701-20065713 FORWARD LENGTH=2471
Length=2471
Score = 1541 bits (834), Expect = 0.0
Identities = 1746/2175 (80%), Gaps = 107/2175 (5%)
Strand=Plus/Plus
Query 219 gaggaagaagatgactgagaaTCGGGTGGTTTTGGTTCTGCTTATACTCTGCATTGTTGG 278
|||||||||||||| |||||| ||| ||| ||| |||| ||| ||| |||||||| ||
Sbjct 61 GAGGAAGAAGATGAGGGAGAATTGGGCGGTGGTGGCTCTGTTTACACTATGCATTGTAGG 120
Query 279 GTTTGAGCCAAGTTTCATCCATGGAGCTACAGATTCATCAGATACTTCAGCGTTAAACAC 338
|||||||| || ||||||||||||||||| ||| ||||||| |||||||| || ||||
Sbjct 121 GTTTGAGCTTAGATTCATCCATGGAGCTACTGATGCATCAGACACTTCAGCATTGAACA- 179
Query 339 CA-TGTTCAGCT-CCATGAATTCTCCAGGACAGCTATCACAATGGACAACATCAGGAGGT 396
|| ||||||| | ||| ||||||||| |||||| |||||||||| || ||| |||
Sbjct 180 CATTGTTCAG-TGGTATGCATTCTCCAGCTCAGCTAACACAATGGACTGCAGCAGCTGGT 238
Query 397 GATCCTTGTGGCCAAAACTGGAAAGGCATAACTTGCTCTGGCTCAAGAGTTACTCAAATA 456
|||||||||||||| || |||| |||| | ||||| || |||||| ||||||||||||||
Sbjct 239 GATCCTTGTGGCCAGAATTGGAGAGGCGTCACTTGTTCCGGCTCACGAGTTACTCAAATA 298
Query 457 AAGTTGTCAGGTCTTGGA-CTTTCTGGATCACTT---GGATATATGCTTGATAAATTGAC 512
||||||||||||||| || || |||||| | ||| ||||| |||||||||||||||||
Sbjct 299 AAGTTGTCAGGTCTT-GAGCTCTCTGGAACTCTTGGAGGATACATGCTTGATAAATTGAC 357
Query 513 TTCTGTTACTGAGTTTGATCTAAGCAACAATAA-CATTGGAGGCGATTTGCCGTATCAGC 571
|||| |||| ||| |||||||||||| |||||| | ||||||| ||||| || ||||||
Sbjct 358 TTCTCTTACCGAGCTTGATCTAAGCAGCAATAATC-TTGGAGGTGATTTACCATATCAGT 416
Query 572 TTCCTCCAAACT-TGGAACGATTGAATCTTGCTAATAACCAGTTAACTGGATCTGC-TCA 629
|||||||||| | || |||||||||| ||||| ||||| || || |||||| |||| ||
Sbjct 417 TTCCTCCAAA-TCTGCAACGATTGAACCTTGCGAATAATCAATTCACTGGAGCTGCTTC- 474
Query 630 ATATTCCA-TTTCT-ATGATGGCACCTCTTAAGTACCTCAATCTTGCTCATAACCAGTTG 687
|| | || ||||| | ||| |||| |||||||| |||||||||| ||| || |||||
Sbjct 475 GTACT-CACTTTCTCA-GATTACACCACTTAAGTATCTCAATCTTGGTCACAATCAGTTT 532
Query 688 AA---GCA-ACTAGCTATTGACTTCACAAAACTC-ACCTCTCTCTCTATCTTGGACCTCT 742
|| ||| | ||||||| |||||| | || ||| | ||||||| | | ||||||| |||
Sbjct 533 AAGGGGCAGA-TAGCTATCGACTTCTCCAAGCTCGA-CTCTCTCACAACCTTGGACTTCT 590
Query 743 CTTCCAATGCTTTTACGGGGTCGCT-CC--CAAACTCTTGTAGCTCTCTTACGAGTGCAA 799
||| |||| |||| ||| || | || | ||| || | |||||| || ||| ||
Sbjct 591 CTTTCAATTCTTTCACGAACTCTTTACCGGC-AAC-GTT-TTCCTCTCTAACAAGTTTAA 647
Query 800 AATCAATTTATCTTCAGAACAATCAGTTCTCAGGCACCA-TTGATATAC-TAGCCACTCT 857
||||| | || ||||||||||||||||||||||||| || | ||| | | ||||| |||
Sbjct 648 AATCACTATACCTTCAGAACAATCAGTTCTCAGGCA-CAGTCGATGT-CTTAGCCGGTCT 705
Query 858 TCCTCTCGAAAATCTGAATATTGCAAACAACCGA-TTCACAGGATGGAT-CCCATATTCT 915
|||||| || | |||||| ||||| ||||| || ||||| || ||||| |||| ||||
Sbjct 706 TCCTCTTGAGACTCTGAACATTGCGAACAA-TGACTTCACGGGGTGGATCCCCA-GTTCT 763
Query 916 TTGAAA-GGCATTAAC-TTGCA-AAAAGATGGTAATTTATTAAATTCTGGGCCTGCACCT 972
|| ||| |||| | || || | ||||||||| || | ||| ||| |||| |||||||||
Sbjct 764 TT-AAAGGGCA-TCACATT-AATAAAAGATGGCAACTCATTCAATACTGGACCTGCACCT 820
Query 973 CCACCACCTCCCGGTACACCTCCGATTAGTAAATCACCTACTCCG-AAATCCGG-GAACC 1030
|||||||| || ||||||||||| || || || || | ||| ||||| || | | |
Sbjct 821 CCACCACCACCTGGTACACCTCCTATCCGTGGCTCCCCGA-GCCGTAAATCTGGAGGA-C 878
Query 1031 GTGAAACCCGGTCCAATGGTGATTCCAGCAGTAGCAAAGACTCC-AGCAAATCAGGGCTT 1089
|||||| |||||| | || ||| |||| ||| | ||| ||| || |||||||| |
Sbjct 879 GTGAAAGCCGGTCTAGTGATGAGTCCACCAGAAATGGAGATTCCAAG-AAATCAGGAATC 937
Query 1090 GGAGCTGGTGGG--ATAGCAGGAATAGTCATTTCATTGTTAGTTGTAACAGC-AGTC--A 1144
||||| || ||| || || || ||| |||||||||||||||| || ||||| ||
Sbjct 938 GGAGC-GG-GGGCAATTGCGGGCATAATCATTTCATTGTTAGTAGTTACAGCTCTTCTTG 995
Query 1145 TAGCTTTCTTCTTGGTCAAG-AGAAAAAGATCAAAGCGGGCATCATCCACGGACATTGAA 1203
| |||||||||||| || || ||||||| ||||||| || ||||| ||| |||||||
Sbjct 996 TTGCTTTCTTCTTGTTC-AGAAGAAAAAAATCAAAGAGGTCATCACCCATGGACATT--- 1051
Query 1204 AAGACTGATAATAAC-ATTAACCAACCCATT-A-TACTAGCGTCAAATGGCTTTCATCAT 1260
|| || || | | | ||||| | || || | | || || ||||| | |||||| |
Sbjct 1052 --GA--GA-AA-ACCGA-TAACC-AGCCTTTCACT-CTTGCTTCAAACGACTTTCA-C-- 1099
Query 1261 GAGAATAAGTCTGTACAGAATCCACCATTAGTTGAGACAAAGAAACTGGATACTTCATTG 1320
|| || || || | |||| | | ||| ||||||||||||||||||||| |||||||||
Sbjct 1100 GAAAACAATTCCATTCAGAGTTCTTCATCAGTTGAGACAAAGAAACTGGACACTTCATTG 1159
Query 1321 TCGATGAATCTACGTCCTCCACCAGCTGAGCGACATAAGTCGTTTGATGACGATGATTCA 1380
|| || ||||| || ||||||||| ||| || | || || |||||||| || |||||
Sbjct 1160 TCTATTAATCTTCGACCTCCACCAATTGATAGAAACAAATCATTTGATGATGAAGATTCG 1219
Query 1381 ACAATGAGAAAACCCATTG-TAG-CAAAGAAAGCTGCTGTTGTTGTTCCTTCAAATGTGA 1438
|| | ||||| || |||| | | | |||||| | | || || ||||||||||||||||
Sbjct 1220 AC-A--AGAAAGCCTATTGCT-GTC-AAGAAATCCACAGTGGTGGTTCCTTCAAATGTGA 1274
Query 1439 -ACACATATACGGTTGCAGATCTTCAAATAGCTACCAACAGTTTCAGCGTAGATAATCTT 1497
|| | ||| | ||||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct 1275 GACTC-TATTCAGTTGCAGATCTCCAAATTGCTACTGGCAGTTTCAGCGTAGATAATCTT 1333
Query 1498 CTTGGTGAAGGGACATTTGGAAGAGTATACAGAGCTCAGTTAGAAGATGGAAAGGTACTT 1557
||||| |||||||| |||||| |||||||||||||| |||| || ||||||||||| |||
Sbjct 1334 CTTGGAGAAGGGACTTTTGGACGAGTATACAGAGCTGAGTTTGATGATGGAAAGGTTCTT 1393
Query 1558 GCTGTGAAGAAAATCGACTCATCTGCGCTTCCCAC--GGATACGGCTGATGATTTTACCG 1615
|||||||||||||| || || ||||| | |||||| || | | | |||||||| | |
Sbjct 1394 GCTGTGAAGAAAATTGATTCGTCTGCTC-TCCCACATGG-CATGACCGATGATTTCATTG 1451
Query 1616 AAATAGTATCGAAAATAGCGC-ATCTGGATCA-CGAAAATGTCACAAAGCTTGATGGTTA 1673
|||| |||||||||||||| | || ||||||| | |||||| || ||||||| ||||||
Sbjct 1452 AAATGGTATCGAAAATAGC-CAATTTGGATCATC-CAAATGTGACCAAGCTTGTTGGTTA 1509
Query 1674 CTGTTCTGAACACGGGCAACACT-TGGTGGTCTATGAGTTCCATAGAAACGGCTCATTGC 1732
|||| |||| ||||| ||||| | | ||||||||||| ||||| | ||| || ||||| |
Sbjct 1510 CTGTGCTGAGCACGGACAACA-TCTCGTGGTCTATGAATTCCACAAAAATGGATCATTAC 1568
Query 1733 ATGACTTTTTACATCTT-GCGGAAGAGGAAAGCAAACCCCTGATATGGAATCCCCGTGTC 1791
||||||| ||||| ||| | ||||||||||| ||| | || | |||||| | || |||
Sbjct 1569 ATGACTTCTTACA-CTTATCAGAAGAGGAAAGTAAAGCATTGGTGTGGAATTCACGAGTC 1627
Query 1792 AAGATCGCTCTTGGCACTGCACGTGCATTGGAGTACT-TGCATGAAGTTTGCTCTCCATC 1850
|||||||||||||| |||||||| ||||||||||| | |||||||||||||||| || ||
Sbjct 1628 AAGATCGCTCTTGGGACTGCACGCGCATTGGAGTA-TCTGCATGAAGTTTGCTCACCGTC 1686
Query 1851 TATAGTCCACAAGAACATTAAATCAGCAAATATTTTACTTGACTCAGAGCTAAATCCGCA 1910
|||||| ||||||| || |||||||| ||||||||||| || |||||||| ||||| ||
Sbjct 1687 TATAGTGGACAAGAATATCAAATCAGCTAATATTTTACTCGATTCAGAGCTGAATCCTCA 1746
Query 1911 CCTCTCAGACTCAGGTCTCGCTAGTTTCCTTCCCACTGCAAATGAGCTACTGAATCAAAA 1970
| | ||||| || |||||||| || ||||||||||| || |||||| || | || ||||
Sbjct 1747 CTTATCAGATTCTGGTCTCGCAAGCTTCCTTCCCACAGCTAATGAGTTATTAAACCAAAC 1806
Query 1971 CGATGAAGGATACAGTGCACCAGAAACT-TCAATGTCAGGCCAATACTCTTTGAAGAGCG 2029
||||||||| || || ||||| | || | ||||||||||||||||| ||||||||||| |
Sbjct 1807 CGATGAAGGGTATAGCGCACCTG-AAGTATCAATGTCAGGCCAATATTCTTTGAAGAGTG 1865
Query 2030 ATGTTTACAGTTTTGGAGTAGTGATGCTTGAGCTTTTAACCGGAAGAAAACCATTCG--A 2087
| |||||||||||||||||||||||||||| |||||||| || ||||||||||| | |
Sbjct 1866 ACATTTACAGTTTTGGAGTAGTGATGCTTGAACTTTTAACTGGGAGAAAACCATTTGACA 1925
Query 2088 -CAGCTCAAGGTCAAGATCTGAACAGTCATTGGTAAGATGGGCAACACCTCAGCTTCACG 2146
|||| |||||||||||||||| |||||| |||| ||||||| ||||| || |||||||
Sbjct 1926 GCAGCACAAGGTCAAGATCTGAGCAGTCACTGGTTCGATGGGCGACACCACAACTTCACG 1985
Query 2147 ACATTGATGCTTTGGGCAAAATGGTTGATCCAGCTCTCAAAGGGCTTTACCCGGTTAAAT 2206
||||||||||||| | ||||||||||||||||||||| ||||||||||| || || ||||
Sbjct 1986 ACATTGATGCTTTAGCCAAAATGGTTGATCCAGCTCTTAAAGGGCTTTATCCTGTCAAAT 2045
Query 2207 CGCTCTCCCGATTTGCAGATGTTATCGCCCTTTGCGTTCAGCCGGAGCCAGAGTTTAGAC 2266
| || || |||||||||||||||||||| || || || ||||||||||| ||||||||||
Sbjct 2046 CCCTTTCTCGATTTGCAGATGTTATCGCTCTCTGTGTCCAGCCGGAGCCGGAGTTTAGAC 2105
Query 2267 CACCGATGTCTGAAGTGGTGCAAGCGCTGGTTGTATTGGTGCAGAGAGCTAACATGAGCA 2326
|||| ||||||||||| ||||| || || ||||| || ||||||||||||||||||||||
Sbjct 2106 CACCAATGTCTGAAGTTGTGCAGGCTCTAGTTGTGTTAGTGCAGAGAGCTAACATGAGCA 2165
Query 2327 AGAGAACTGTCGGAG 2341
|||||||||||||||
Sbjct 2166 AGAGAACTGTCGGAG 2180
> AT3G14340.1 | Symbols: | unknown protein; Has 1 Blast hits to
1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr3:4782757-4783137 FORWARD LENGTH=381
Length=381
Score = 355 bits (192), Expect = 1e-96
Identities = 280/317 (88%), Gaps = 28/317 (9%)
Strand=Plus/Minus
Query 2357 CCGGCGTCAATGATTACATGTAAATTCTTTACCTGATGAGAACCAACGAAGGAAAACATA 2416
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 381 CCGGCGTCAATGATTACATGTAAATTCTTTACCTGATGAGAACCAACAAAAAAAAACATA 322
Query 2417 AAAATTTGCCC-TTTTCTCTTGTCTTG-TCGGATTCTGGGTCGGACGACAACAAGT---- 2470
||||||||||| |||||||||||| || ||||| ||||| | ||||||||||||||
Sbjct 321 AAAATTTGCCCTTTTTCTCTTGTC-TGCTCGGAATCTGGATGGGACGACAACAAGTGACA 263
Query 2471 ----------Ga-aaaa-aaaaCAAAATCCttttttttttttGGTTTCATAAAAC---TG 2515
|| |||| ||||||||||||||||||| ||| ||||||||||||| ||
Sbjct 262 ACCGAGGACAGACAAAACAAAACAAAATCCTTTTTTTCTTTCGGTTTCATAAAACTGATG 203
Query 2516 ATGAGAGAATAACAACACAGCAAACCCTTCACGCATTGTACACTCCCATGTTTCTTTGTA 2575
||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct 202 ATGAGAGAATAACAACA-A-C-AACCCTTCACGCATTGTACACTCCCATGTTTCTTTGTA 146
Query 2576 ATTTGTTCCCAATTTGTAGCTTTTTT---AGATTCCGACAACATGAACAAAACCATCCCC 2632
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 145 ATTTGTTCCCAATTTGTAGCTTTTTTTTTAGATTCCGACAACATGAACAAAACCATTCCC 86
Query 2633 TTTTGTGAGTTCCGATC 2649
|||||||||||||||||
Sbjct 85 TTTTGTGAGTTCCGATC 69
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 133143066722
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5