BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478873
Length=1172
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14550.1 | Symbols: GGPS3 | geranylgeranyl pyrophosphate syn... 1541 0.0
AT3G14530.1 | Symbols: | Terpenoid synthases superfamily prote... 1406 0.0
AT3G29430.1 | Symbols: | Terpenoid synthases superfamily prote... 1223 0.0
AT3G14510.1 | Symbols: | Polyprenyl synthetase family protein ... 1190 0.0
> AT3G14550.1 | Symbols: GGPS3 | geranylgeranyl pyrophosphate synthase
3 | chr3:4884566-4885982 REVERSE LENGTH=1308
Length=1308
Score = 1541 bits (834), Expect = 0.0
Identities = 1049/1152 (91%), Gaps = 18/1152 (2%)
Strand=Plus/Plus
Query 1 TTATAAAGTTCTATTGGAGACGGTGGACAGGCCATGGCTACTACTGTTCCTCTCAGCTCA 60
||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 5 TTATAAAGTTCTATTAGAGACGGTGGATAGGCCATGGCTACTACTGTTCATCTCAGCTCA 64
Query 61 CTCTCCCACTTCATCCAATCCAGAGGAAGAAGAGACAACTCCATATCTTCCGTCAAGAGT 120
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 65 TTCTCCCTCTTCATCCAATCCAGAGGAAGAAGAGACAACTCCATATCTTCCGTCAAGAGT 124
Query 121 CTCCAAAAACGCACAGGTTTGTCTCTCTCTTCTGCGCTCACCTCACAAGGTGCCAGAGAC 180
||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||
Sbjct 125 CTCAAAAAACGCACAGGTTTGTCTCCCTCTTCTGCCCTCACCTCACAAGGTGGCAGAGAC 184
Query 181 ATGATTCCACCAGAGGGAAAAAGCGACGATCGCAACTCTGCCTTTGACTTCAAGTCCTAT 240
||||||||||||||||||||| || | |||| ||||||||| ||||| ||||||| |||
Sbjct 185 ATGATTCCACCAGAGGGAAAATGCAATGATCACAACTCTGCTTTTGATTTCAAGTTGTAT 244
Query 241 ATGATTAATAAAGCCAAATCTGTAAACGCGGCTCTCGACATTTCAGTACCGCTCCGAGAA 300
||||| |||||| |||||||||| |||||||||||| |||| |||||||||||||||
Sbjct 245 ATGATCCGCAAAGCCGAATCTGTAAATGCGGCTCTCGACGTTTCTGTACCGCTCCGAGAA 304
Query 301 CCCCTCACGGTCCAGGAGGCCGTGCGGTACTCATTGTTGGCGGGTGGAAAACGTGTGAGG 360
|||||||| |||||||| |||||||||||||||||| | ||||| |||||||||||||||
Sbjct 305 CCCCTCACTGTCCAGGAAGCCGTGCGGTACTCATTGCTAGCGGGCGGAAAACGTGTGAGG 364
Query 361 CCTATGCTCTGCATTG-CTTCCTGCGAGCTCGTGGGTGG-GAACGAGGCTACTGCCATGC 418
||| |||||||||||| | | ||||||||| ||||| || | |||||||||||||||||
Sbjct 365 CCTCTGCTCTGCATTGCCGT-CTGCGAGCTTGTGGGAGGCG-ACGAGGCTACTGCCATGT 422
Query 419 CAGCCGCTTGCGCAGTCGAGATGATCCACACAAGCTCTCTTATTCATGACGATCTTCCGT 478
|||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 CAGCTGCTTGCGCGGTTGAGATGATCCACACAAGCTCTCTTATTCATGACGATCTTCCGT 482
Query 479 GCATGGACAATGCCGACCTCCGCAGAGGCAAGCCAACCAACCACAAGGTATTTGGAGAAG 538
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 483 GCATGGACAATGCCGACCTCCGCAGAGGCAAGCCCACCAACCACAAGGTATATGGAGAAG 542
Query 539 ACATGGCTGTTTTGGCGGGTGATGCACTCCTTGCTTTAGCGTTTGAGCACATGACGGTTG 598
||||||| |||||||| ||||||||||||||||| || |||||||||||||||||| |||
Sbjct 543 ACATGGCGGTTTTGGCAGGTGATGCACTCCTTGCATTGGCGTTTGAGCACATGACGTTTG 602
Query 599 TGTCGAGTGGTTTGGTCCCTCCCGAGAGGATGATTCGCGCGGTGGCTGAGCTGGCCAGGG 658
|||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 603 TGTCGAGTGGGTTGGTCGCTCCCGAGAGGATGATTCGCGCGGTGGTTGAGCTGGCCAGGG 662
Query 659 CCATAGGGACAACAGGGCTCGTTGCTGGACAAATGATAGACCTAGCCAGCGAAAGATTGA 718
|||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 663 CCATAGGGACTACAGGGCTAGTTGCTGGACAAATGATAGACCTAGCCAGCGAAAGACTGA 722
Query 719 ATCCACACGACGCTGGATTGGAGCGTCTAGAGTTCATCCACCTCCACAAAACAGCGGCAT 778
||||| || | | ||||||||||| ||||||||||||||| ||||||||||| |||||||
Sbjct 723 ATCCAGACAAGGTTGGATTGGAGCATCTAGAGTTCATCCATCTCCACAAAACGGCGGCAT 782
Query 779 TGTTGGAGGCAGCGGCGGTGTTAGGGGCCATAATGGGAGGTGGAACAGAGGAAGAGATCG 838
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 783 TGTTGGAGGCAGCGGCGGTTTTAGGGGTTATAATGGGAGGTGGAACAGAGGAAGAGATCG 842
Query 839 AGAAA-CTTAGAAAGTATGCGAGATGTATTGGGCTACTGTTTCAGGTGGTTGATGATATT 897
| ||| |||||||||||||| || |||||||| ||||||||||||||||||||||| |||
Sbjct 843 A-AAAGCTTAGAAAGTATGCTAGGTGTATTGGACTACTGTTTCAGGTGGTTGATGACATT 901
Query 898 CTCGACGTAACGGAATCTACTGAGGAATTGGGTAAGACCGCCGGAAAAGACTTAATGGCC 957
||||||||||| ||||||||||||||||||| ||||| || ||||||||| |||||||
Sbjct 902 CTCGACGTAACAAAATCTACTGAGGAATTGGGAAAGACTGCAGGAAAAGACGTAATGGCT 961
Query 958 GGAAAGCTGACGTATCCAAGACTGATAGGTTTGGAGAGATCGAGGGAAGTTGCAGAGAAG 1017
|||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||
Sbjct 962 GGAAAGCTGACGTATCCAAGGCTGATAGGTTTGGAGAGATCAAAGGAAGTTGCAGAGAAA 1021
Query 1018 CTGAGGAAAGAAGCAGAGGAACAGGTTTTAGGGTTTGATTCCGAA--AATTCAGCGCCTC 1075
||||||| ||||||||||||||| || ||||||||||| || || || | |||||||
Sbjct 1022 CTGAGGAGAGAAGCAGAGGAACAACTTCTAGGGTTTGAT-CC-AAGTAAGGCGGCGCCTC 1079
Query 1076 TGGTGGCTCTTGCTAGTTACATTGCTTGCAGACACAACTGATACTTTTCATGGACTGATC 1135
|||||||||||||||| ||||| |||||||||||||||||| | | |||||||||
Sbjct 1080 TGGTGGCTCTTGCTAGCTACATCGCTTGCAGACACAACTGA-A-T------GGACTGATC 1131
Query 1136 ATATCCTCAATG 1147
||||||||||||
Sbjct 1132 ATATCCTCAATG 1143
> AT3G14530.1 | Symbols: | Terpenoid synthases superfamily protein
| chr3:4879112-4880448 REVERSE LENGTH=1264
Length=1264
Score = 1406 bits (761), Expect = 0.0
Identities = 997/1111 (90%), Gaps = 16/1111 (1%)
Strand=Plus/Plus
Query 34 ATGGCTACTACTGTTCCTCTCAGCTCACT-CTCCCACTTCATCCAATCCAGAGGAAGAAG 92
|||||||||||||||| |||||||||| | ||||| ||||| ||||||||||||||||||
Sbjct 1 ATGGCTACTACTGTTCATCTCAGCTCA-TCCTCCCTCTTCAGCCAATCCAGAGGAAGAAG 59
Query 93 AGACAACTCCATATCTTCCGTCAAGAGTCTCCAAAAACGCACAGGTTTGTCTCTCTCTTC 152
|||||||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||
Sbjct 60 AGACAACTCCATATCTTCCGTCAAGAGTCTCCGAAAACGCACCGTTTTATCTCTCTCTTC 119
Query 153 TGCGCTCACCTCACAAGGTGCCAGAG-ACATGATTCCACCAGAGGGAAAAAGCGACGATC 211
||| ||||||||||||| || || | ||||||||| |||||||||||||||| |||||
Sbjct 120 TGCCCTCACCTCACAAGACGC-AGGGCACATGATTCAACCAGAGGGAAAAAGCAACGATA 178
Query 212 GCAACTCTGCCTTTGACTTCAAGTCCTATATGATTAATAAAGCCAAATCTGTAAACGCGG 271
||||||||| ||||| ||||||| |||||||| |||||| | |||||||| ||||
Sbjct 179 ACAACTCTGCTTTTGATTTCAAGTTGTATATGATCCGCAAAGCCGAGTCTGTAAATGCGG 238
Query 272 CTCTCGACATTTCAGTACCGCTCC-GAGAACCCCTCACGGTCCAGGAGGCCGTGC-GGTA 329
|||||||| |||| |||||||| | || ||||||| || |||| || || || | ||||
Sbjct 239 CTCTCGACGTTTCCGTACCGCTTCTGA-AACCCCTTACTATCCAAGAAGCGGT-CAGGTA 296
Query 330 CTCATTGTTGGCGGGTGGAAAACGTGTGAGGCCTATGCTCTGCATTGCTTCCTGCGAGCT 389
||| ||| | ||||| |||||||||||||||||| ||||||||||||| | || |||||
Sbjct 297 CTCTTTGCTAGCGGGCGGAAAACGTGTGAGGCCTCTGCTCTGCATTGCCGCTTGTGAGCT 356
Query 390 CGTGGGTGG-GAACGAGGCTACTGCCATGCCAGCCGCTTGCGCAGTCGAGATGATCCACA 448
||||| || || |||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 357 TGTGGGGGGCGA-CGAGGCTACTGCCATGTCAGCCGCTTGCGCGGTCGAGATGATCCACA 415
Query 449 CAAGCTCTCTTATTCATGACGATCTTCCGTGCATGGACAATGCCGACCTCCGCAGAGGCA 508
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 416 CAAGCTCTCTCATTCATGACGATCTTCCGTGCATGGACAATGCCGACCTCCGTAGAGGCA 475
Query 509 AGCCAACCAACCACAAGGTATTTGGAGAAGACATGGCTGTTTTGGCGGGTGATGCACTCC 568
|||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 476 AGCCCACCAATCACAAGGTATATGGAGAAGACATGGCGGTTTTGGCGGGTGATGCACTCC 535
Query 569 TTGCTTTAGCGTTTGAGCACATGACGGTTGTGTCGAGTGGTTTGGTCCCTCCCGAGAGGA 628
|||| || |||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct 536 TTGCATTGGCGTTTGAGCACATGACGGTTGTGTCGAGTGGGTTGGTCGCTCCCGAGAAGA 595
Query 629 TGATTCGCGCGGTGGCTGAGCTGGCCAGGGCCATAGGGACAACAGGGCTCGTTGCTGGAC 688
|||||||||| |||| |||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 596 TGATTCGCGCCGTGGTTGAGCTGGCCAGGGCCATAGGGACTACAGGGCTAGTTGCTGGAC 655
Query 689 AAATGATAGACCTAGCCAGCGAAAGATTGAATCCACACGACGCTGGATTGGAGCGTCTAG 748
||||||||||||||||||||||||||||||||||| || | | ||||||||||| |||||
Sbjct 656 AAATGATAGACCTAGCCAGCGAAAGATTGAATCCAGACAAGGTTGGATTGGAGCATCTAG 715
Query 749 AGTTCATCCACCTCCACAAAACAGCGGCATTGTTGGAGGCAGCGGCGGTGTTAGGGGCCA 808
|||||||||| ||||||||||| ||||||||||||||||||||||| || ||||||| |
Sbjct 716 AGTTCATCCATCTCCACAAAACGGCGGCATTGTTGGAGGCAGCGGCAGTTTTAGGGGTTA 775
Query 809 TAATGGGAGGTGGAACAGAGGAAGAGATCGAGAAA-CTTAGAAAGTATGCGAGATGTATT 867
|||||||||||||||||||| |||| ||||| ||| |||||||||||||| || ||||||
Sbjct 776 TAATGGGAGGTGGAACAGAGCAAGAAATCGA-AAAGCTTAGAAAGTATGCTAGGTGTATT 834
Query 868 GGGCTACTGTTTCAGGTGGTTGATGATATTCTCGACGTAACGGAATCTACTGAGGAATTG 927
|| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||||
Sbjct 835 GGACTACTGTTTCAGGTTGTTGATGACATTCTCGACGTAACAAAATCTACTGAGGAATTG 894
Query 928 GGTAAGACCGCCGGAAAAGACTTAATGGCCGGAAAGCTGACGTATCCAAGACTGATAGGT 987
|||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 895 GGTAAGACAGCCGGAAAAGACGTAATGGCCGGAAAGCTGACGTATCCAAGGCTGATAGGT 954
Query 988 TTGGAGAGATCGAGGGAAGTTGCAGAGAAGCTGAGGAAAGAAGCAGAGGAACAGGTTTTA 1047
|||||| |||| ||||||||||||||||| ||||||| |||||||||||||||| || ||
Sbjct 955 TTGGAGGGATCCAGGGAAGTTGCAGAGAAACTGAGGAGAGAAGCAGAGGAACAGCTTCTA 1014
Query 1048 GGGTTTGATTCCGAA--AATTCAGCGCCTCTGGTGGCTCTTGCTAGTTACATTGCTTGCA 1105
||||||||| || || || | |||||| ||||||||||||| || |||||||||||||
Sbjct 1015 GGGTTTGAT-CC-AAGTAAGGCGGCGCCTTTGGTGGCTCTTGCCAGCTACATTGCTTGCA 1072
Query 1106 GACACAACTGATACTTTTCATGGACTGATCA 1136
|||||||||||||||||||||||||||||||
Sbjct 1073 GACACAACTGATACTTTTCATGGACTGATCA 1103
> AT3G29430.1 | Symbols: | Terpenoid synthases superfamily protein
| chr3:11311356-11312792 FORWARD LENGTH=1333
Length=1333
Score = 1223 bits (662), Expect = 0.0
Identities = 1000/1159 (86%), Gaps = 39/1159 (3%)
Strand=Plus/Plus
Query 2 TATAA-AGTTCTATTGGAGACGGTGGA-CAGGCCATGGCTACTACTGTTCCTCTCAGCTC 59
||||| | || ||| ||||| |||||| | |||||||||||||| ||||||||||
Sbjct 40 TATAATA-TTATATCGGAGAAGGTGGATC-GGCCATGGCTACTA------CTCTCAGCTC 91
Query 60 ACT-CTCCCACTTCATCCAATCCAGAGGAAGAAGAGACAACTCCATATCTTCCGTCAAGA 118
| | ||| | ||||||||||| ||||||| | ||| |||||||| |||| || |||| |
Sbjct 92 A-TCCTCTCTCTTCATCCAATTCAGAGGACGGAGATACAACTCCCTATCATCATTCAACA 150
Query 119 GTCTCCAAAAACGCACAGGTTTGTCTCTCTCTTCTGCGCTCA-CCTCACAAGGTGCCAGA 177
||||||||| ||||| | |||||| || |||| ||| || | |||||||||||| ||
Sbjct 151 ATCTCCAAAAGCGCACCGTTTTGTCGCTTTCTTGTGCTCT-ATCCTCACAAGGTG---GA 206
Query 178 GACATGATTCCACCAGAGGGAAAAAGCGACGATCGCAACTCTGCCTTTGACTTCAAGTCC 237
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 207 GACATGATTCCACCAGAGGGAAAAAGCAATGATCGCAACTCTGCCTTTGACTTCAAGTCG 266
Query 238 TATATGATTAATAAAGCCAAATCTGTAAACGCGGCTCTCGACATTTCAGTACCGCTCCGA 297
|||||||| ||||||| |||| |||| ||||||||| || |||| ||||| |||| |
Sbjct 267 TATATGATCCGTAAAGCCGAATCCGTAAGTGCGGCTCTCAACGTTTCGGTACCTCTCCAA 326
Query 298 GAACCCCTCACGGTCCAGGAGGCCGTGCGGTACTCATTGTTGGCGGGTGGAAAACGTGTG 357
||||| |||||| | || ||||| |||||||||||||| | ||||| ||||||||||||
Sbjct 327 GAACCACTCACGATACAAGAGGCGGTGCGGTACTCATTACTAGCGGGCGGAAAACGTGTG 386
Query 358 AGGCCTATGCTCTGCATTGCTTCCTGCGAGCTCGTGGGTGG-GAACGAGGCTACTGCCAT 416
|||||| | |||||||||||| | || |||||||||||||| | ||||||||||||||||
Sbjct 387 AGGCCTCTCCTCTGCATTGCTGCTTGTGAGCTCGTGGGTGGCG-ACGAGGCTACTGCCAT 445
Query 417 GCCAGCCGCTTGCGCAGTCGAGATGATCCACACAAGCTCTCTTATTCATGACGATCTTCC 476
| |||||||||| |||||||||||||||||||| ||||| || || |||||||| || ||
Sbjct 446 GTCAGCCGCTTGTGCAGTCGAGATGATCCACACGAGCTCGCTAATCCATGACGACCTCCC 505
Query 477 GTGCATGGACAATGCCGACCTCCGCAGAGGCAAGCCAACCAACCACAAGGTATTTGGAGA 536
|||||||||| ||||||||||||| ||||||||||| |||||||| || | |||||||||
Sbjct 506 GTGCATGGACGATGCCGACCTCCGTAGAGGCAAGCCCACCAACCATAAAGAATTTGGAGA 565
Query 537 AGACATGGCTGTTTTGGCGGGTGATGCACTCCTTGCTTTAGCGTTTGAGCACATGACGGT 596
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 566 AGACATGGCGGTTTTGGCGGGTGATGCACTCCTTGCTTTAGCGTTTGAGCACATGACG-T 624
Query 597 T-GTGTCGAGTGGTTTGGTCCCTCCC-GAGAGGATGATTCGCGCGGTGGCTG-AGCTGGC 653
| ||||| | ||| ||||| | ||| ||||||||||| || || || || |||||||
Sbjct 625 TCGTGTCAAATGGGTTGGTTGC-CCCTGAGAGGATGATCCGTGCTGTAA-TGGAGCTGGC 682
Query 654 CAGGGCCATAGGGACAACAGGGCTCGTTGCTGGACAAATGA-TAGACCTA-GCCAGCGAA 711
| |||||||||||||| |||||| || ||||| ||| ||| | ||| || | ||| ||
Sbjct 683 AAAGGCCATAGGGACAAAAGGGCTAGTGGCTGGGCAAGTGACT-GACTTATGT-AGCCAA 740
Query 712 AGATTGAATCCACACGACG-CTGGATTGGAGCGTCTAGAGTTCATCCACCTCCACAAAAC 770
||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGATTGAATCCAGACGACGTC-GGATTGGAGCGTCTAGAGTTCATCCACCTCCACAAAAC 799
Query 771 AGCGGCATTGTTGGAGGCAGCGGCGGTGTTAGGGGCCATAATGGGAGGTGGAACAGAGGA 830
|| || ||||||||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct 800 GGCCGCCTTGTTGGAGGCAGCGGCAGTTTTAGGAGCCATAATGGGAGGTGGAACAGAGGA 859
Query 831 AGAGATCGAGAAA-CTTAGAAAGTATGCGAGATGTATTGGGCTACTGTTTCAGGTGGTTG 889
||||||||| ||| || ||||| |||||||||||||||||||| |||||||||||||||
Sbjct 860 AGAGATCGA-AAAGCTAAGAAAATATGCGAGATGTATTGGGCTGTTGTTTCAGGTGGTTG 918
Query 890 ATGATATTCTCGACGTAACGGAATCTACTGAGGAATTGGGTAAGACCGCCGGAAAAGACT 949
|||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||| |
Sbjct 919 ATGATATTCTTGACGTAACGGAATCTACTAAGGAATTGGGCAAGACAGCCGGAAAAGA-T 977
Query 950 -TAATGGCCGGAAAGCTGACGTATCCAAGACTGATAGGTTTGGAGAGATCGAGGGAAGTT 1008
|||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct 978 GTAATGGCCGGGAAGCTGACGTATCCAAGGCTGATAGGCTTGGAGAGATCCAGGGAAGTT 1037
Query 1009 GCAGAGAAGCTGAGGAA-AGAAGCAGAGGAACAGGTTTTAGGGTTTGATTCCGAAAATTC 1067
|| ||||| ||||| || |||||||| ||||||| || |||||||||||||||| || |
Sbjct 1038 GCGGAGAAACTGAG-AAGAGAAGCAGCGGAACAGCTTCTAGGGTTTGATTCCGACAAGGC 1096
Query 1068 AGCGCCTCTGGTGGCTCTTGCTAGTTACATTGCTTGCAGACACAACTGATACTTTT-CAT 1126
|||||||| |||||||||||||| |||||||| ||||||||||||||||| |||| |||
Sbjct 1097 GGCGCCTCTTGTGGCTCTTGCTAGCTACATTGCCTGCAGACACAACTGATA-TTTTGCAT 1155
Query 1127 GGACTGATCATATCCTCAA 1145
| ||||| |||||||||||
Sbjct 1156 GAACTGAACATATCCTCAA 1174
> AT3G14510.1 | Symbols: | Polyprenyl synthetase family protein
| chr3:4867378-4868414 REVERSE LENGTH=964
Length=964
Score = 1190 bits (644), Expect = 0.0
Identities = 863/969 (89%), Gaps = 14/969 (1%)
Strand=Plus/Plus
Query 157 CTCACCTCACAAGGTGCCAGAGACATGATTCCACCAGAGGGAAAAAGCGACGATCGCAAC 216
|||||||||||||||| ||||||||||||||||||| ||||||||||| | |||| ||||
Sbjct 1 CTCACCTCACAAGGTGGCAGAGACATGATTCCACCACAGGGAAAAAGCAATGATCACAAC 60
Query 217 TCTGCCTTTGACTTCAAGTCCTATATGATTAATAAAGCCAAATCTGTAAACGCGGCTCTC 276
||||| ||||| ||||||| |||||||| |||||| |||||||||| |||||||||
Sbjct 61 TCTGCTTTTGATTTCAAGTTGTATATGATCCGCAAAGCCGAATCTGTAAATGCGGCTCTC 120
Query 277 GACATTTC-A---GTACCGCTCCGAGAACCCCTCACGGTCCAGGAGGCCGTGCGGTACTC 332
||| |||| | |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 121 GACGTTTCGATCTGTACCGCTCCGAGAACCCCTCACGGTCCAGGAAGCCGTGCGGTACTC 180
Query 333 ATTGTTGGCGGGTGGAAAACGTGTGAGGCCTATGCTCTGCATTGCT-TCCTGCGAGCTCG 391
|||| | ||||| |||||||||||||||||| |||||||||||||| | ||||||||| |
Sbjct 181 ATTGCTAGCGGGCGGAAAACGTGTGAGGCCTCTGCTCTGCATTGCTGT-CTGCGAGCTTG 239
Query 392 TGGGTGG-GAACGAGGCTACTGCCATGCCAGCCGCTTGCGCAGTCGAGATGATCCACACA 450
|||| || | ||||||||||||||||| |||| |||||||| ||||||||||||||||||
Sbjct 240 TGGGAGGCG-ACGAGGCTACTGCCATGTCAGCTGCTTGCGCGGTCGAGATGATCCACACA 298
Query 451 AGCTCTCTTATTCATGACGATCTTCCGTGCATGGACAATGCCGACCTCCGCAGAGGCAAG 510
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 299 AGCTCTCTCATTCATGACGATCTTCCGTGCATGGACAATGCCGACCTCCGTAGAGGCAAG 358
Query 511 CCAACCAACCACAAGGTATTTGGAGAAGACATGGCTGTTTTGGCGGGTGATGCACTCCTT 570
|| ||||| |||||||||||||||||||||||||| |||||||| |||||||| || |||
Sbjct 359 CCCACCAATCACAAGGTATTTGGAGAAGACATGGCGGTTTTGGCCGGTGATGCGCTTCTT 418
Query 571 GCTTTAGCGTTTGAGCACATGACGGTTGTGTCGAGTGGTTTGGTCCCTCCCGAGAGGATG 630
||||| |||||||||||||||||||||||||||||||| |||||| || |||||||||||
Sbjct 419 GCTTTGGCGTTTGAGCACATGACGGTTGTGTCGAGTGGGTTGGTCGCTTCCGAGAGGATG 478
Query 631 ATTCGCGCGGTGGCTGAGCTGGCCAGGGCCATAGGGACAACAGGGCTCGTTGCTGGACAA 690
|| || || |||| ||||||||| |||||||||||||||| |||| | || || || |||
Sbjct 479 ATCCGGGCAGTGGTTGAGCTGGCAAGGGCCATAGGGACAAAAGGGTTAGTGGCAGGGCAA 538
Query 691 ATGATAGACCTA-GCCAGCGAAAGATTGAATCCACACGACGCTGGATTGGAGCGTCTAGA 749
|| | |||||| || ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 539 GTGGTTGACCTAAGC-AGCGAAAGATTGAATCCACACGACGTTGGATTGGAGCGTCTAGA 597
Query 750 GTTCATCCACCTCCACAAAACAGCGGCATTGTTGGAGGCAGCGGCGGTGT-TAGGGGCCA 808
||||||||||||||||||||| ||||| |||||||||||||| ||||| | |||| ||||
Sbjct 598 GTTCATCCACCTCCACAAAACGGCGGCGTTGTTGGAGGCAGCAGCGGT-TATAGGTGCCA 656
Query 809 TAATGGGAGGTGGAACAGAGGAAGAGATCGAGAAA-CTTAGAAAGTATGCGAGATGTATT 867
||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||
Sbjct 657 TAATGGGAGGTGGAACAGAGGAAGAGATCGA-AAAGCTTAGAAAGTATGCTAGGTGTATT 715
Query 868 GGGCTACTGTTTCAGGTGGTTGATGATATTCTCGACGTAACGGAATCTACTGAGGAATTG 927
|| ||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||||
Sbjct 716 GGACTATTGTTTCAGGTTGTTGATGATATTCTTGACGTAACAAAATCTACAGAGGAATTG 775
Query 928 GGTAAGACCGCCGGAAAAGACTTAATGGCCGGAAAGCTGACGTATCCAAGACTGATAGGT 987
|| ||||| || ||||||||| ||||||| |||||||||||||||||||| |||||||||
Sbjct 776 GGAAAGACTGCAGGAAAAGACGTAATGGCTGGAAAGCTGACGTATCCAAGGCTGATAGGT 835
Query 988 TTGGAGAGATCGAGGGAAGTTGCAGAGAAGCTGAGGAAAGAAGCAGAGGAACAGGTTTTA 1047
||||||||||| ||||||||||| ||||| ||||| | |||||| ||||| ||| || ||
Sbjct 836 TTGGAGAGATCCAGGGAAGTTGCGGAGAAACTGAGCAGAGAAGCCGAGGAGCAGCTTCTA 895
Query 1048 GGGTTTGATTCCGAAAATTCAGCGCCTCTGGTGGCTCTTGCTAGTTACATTGCTTGCAGA 1107
|||||||| || || || | ||||||||||| ||||||||||| |||||| ||||||||
Sbjct 896 GGGTTTGAGTCTGACAAGGCGGCGCCTCTGGTAGCTCTTGCTAGCTACATTTCTTGCAGA 955
Query 1108 CACAACTGA 1116
|| |||||
Sbjct 956 AACGACTGA 964
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57529824570
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5