BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478877
Length=2615
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14590.2 | Symbols: NTMC2TYPE6.2, NTMC2T6.2 | Calcium-depend... 3410 0.0
AT1G53590.1 | Symbols: NTMC2TYPE6.1, NTMC2T6.1 | Calcium-depend... 1463 0.0
> AT3G14590.2 | Symbols: NTMC2TYPE6.2, NTMC2T6.2 | Calcium-dependent
lipid-binding (CaLB domain) family protein | chr3:4904278-4907992
REVERSE LENGTH=2635
Length=2635
Score = 3410 bits (1846), Expect = 0.0
Identities = 2102/2222 (95%), Gaps = 32/2222 (1%)
Strand=Plus/Plus
Query 399 GGTTCATGAACGCTATGTGATGAGGTTGAGGAAGAAACTACAGTTTGAAGAGAGGAAGCA 458
|||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||
Sbjct 368 GGTTCATGAACGCTATGTGATGAGATTGAGGAAGAAATTGCAGTTTGAAGAGAGGAAGCA 427
Query 459 AGCTAACCAGAGAAGGGTTCTATCTGATTCTGAATCGGTGAGGTGGTTAAATCATGCTAT 518
||||||||||||| | |||||||||||||||||||||||| ||||||| |||||||| |
Sbjct 428 AGCTAACCAGAGACGTGTTCTATCTGATTCTGAATCGGTGCGGTGGTTGAATCATGCCGT 487
Query 519 GGAGAAGATATGGCCTATTTGTATGGAACAGATTGCATCTCAGAAGATTCTACGTCCGAT 578
||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 488 GGAGAGGATATGGCCTATTTGTATGGAACAGATTGCTTCTCAGAAGATTCTTCGTCCGAT 547
Query 579 CATACCTTGGTTCTTGGACAAGTATAGACCTTGGACTGCGAAAAAAGCTGTGATACAACA 638
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 548 CATACCTTGGTTCTTGGACAAGTATAGACCTTGGACTGCGAAAAAAGTTGTGATACAACA 607
Query 639 CCTCTATTTGGGAAGAAACCCGCCTTTGTTGACAGATATAAGGGTGCTTCGGCAATCTAC 698
||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||
Sbjct 608 CCTTTATTTGGGAAGAAACCCTCCTTTGTTGACAGATATTAGGGTTCTACGGCAATCTAC 667
Query 699 GGGTGATGATCACTTGGTGCTGGAACTTGGAATGAATTTCCTCACAGCAGATGATATGAG 758
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 668 GGGTGATGATCACTTGGTACTGGAACTTGGAATGAATTTCCTCACAGCAGATGATATGAG 727
Query 759 CGCAATACTCGCTGTGAAGTTAAGAAAAAGACTTGGGTTTGGAATGTGGACAAAGTTGCA 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 728 CGCAATACTCGCTGTGAAGTTAAGAAAAAGACTTGGGTTTGGAATGTGGACAAAGTTGCA 787
Query 819 TTTGACAGGAATGCATGTTGAAGGAAAGGTGTTGATTGGAGTGAAGTTCCTTCGTCGATG 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 TTTGACAGGAATGCATGTTGAAGGAAAGGTGTTGATTGGAGTGAAGTTCCTTCGTCGATG 847
Query 879 GCCTTTTCTGGGGCGTTTACGTGTTTGTTTTGCAGAGCCACCTTATTTCCAAATGACTGT 938
||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 848 GCCTTTTCTCGGGCGTTTACGAGTGTGTTTTGCAGAGCCACCTTATTTCCAAATGACTGT 907
Query 939 TAAACCAATTACCACTCATGGACTTGATGTTGCTGCGCTTCCAGGAATTGCAGGATGGCT 998
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 908 TAAACCAATTACCACTCATGGACTTGATGTTGCTGTGCTTCCAGGGATTGCAGGATGGCT 967
Query 999 AGATAAACTTTTGTCTGTCGCATTTGAGCAAACTCTTGTTGAGCCAAATATGCTGGTAGT 1058
||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 968 AGACAAACTTTTGTCTGTTGCATTTGAGCAGACTCTTGTTGAGCCAAATATGCTGGTAGT 1027
Query 1059 TGATATGGAGAAATTTGTTAGCCCAGAGCCAGGAGAAAATTGGTTCTTTGTTGATGAGAA 1118
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 1028 TGATATGGAGAAATTTGTTAGCCCAGAGTCAGGAGATAATTGGTTCTTTGTTGATGAGAA 1087
Query 1119 AGAACCAGTAGCACACGCTCTTGTTGAAGTCGTTGAAGCATCTGATGTTAAACCATCAGA 1178
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1088 AGAACCAGTAGCACACGCTCTTGTTGAAGTCGTTGAAGCATGTGATGTTAAACCATCAGA 1147
Query 1179 TCTAAACGGTTTAGCTGATCCATATGTGAAAGGGCAGCTTGGCGCTTACAGATTCAAAAC 1238
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1148 TCTAAACGGTTTAGCTGATCCTTACGTGAAAGGGCAGCTTGGCGCTTACAGATTCAAAAC 1207
Query 1239 CAAGATACTATGGAAAACGTTGGCTCCTAAATGGCAAGAAGAGTTCAAGATACCAATTTG 1298
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1208 CAAGATACTATGGAAAACCTTGGCTCCCAAATGGCAAGAAGAGTTCAAGATACCAATCTG 1267
Query 1299 CACATGGGACTCCCCAAATATCCTTAACATTGAAGTTCAAGACAAAGACCGATTTACCGA 1358
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1268 CACATGGGACTCCGCAAATATTCTTAACATTGAAGTTCAAGACAAAGACCGATTTAGCGA 1327
Query 1359 TGACAGTCTTGGCGATTGTTCAGTGAACATTGCAGAGTTTCGAGGCGGCCAAAGAAATGA 1418
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1328 TGACAGTCTTGGCGACTGTTCAGTGAACATTGCAGAGTTTCGAGGCGGCCAAAGAAATGA 1387
Query 1419 TATGTGGTTGCCTCTTCAGAACATTAAAATGGGGAGGCTGCACCTTGCTATAACCATACT 1478
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1388 TATGTGGTTGCCTCTTCAGAACATTAAAATGGGGAGATTGCACCTTGCTATAACCGTACT 1447
Query 1479 TGAGGACGAGGCAAAGTTGAACGATGATCCGTTTGAAGGAGTGACAATAAGTAAGGAAGA 1538
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1448 TGAGGACGAGGCAAAGTTGAACGATGATCCGTTTGAAGGAGTGACAATATGTAAGGAAGA 1507
Query 1539 CATGTGGGCTTCTTTTGCTTCCGACGTTACAAGTAAAGGTTCCTTCTCATCAGTGGTATC 1598
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1508 CATGTGGGCTTCTTTTGCTTCCGACGTTACAAATAAAGGTTCCTTCTCATCAGTGGTATC 1567
Query 1599 TGACAAGTCTCCAAGGGTTCCTGATAATATGGAACCAATTAACATCGAAGGACAAGAAGA 1658
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1568 TGACAAGTCTCCAAGGGTTCCTGATAATATGGAACCAATAAACATCGAAGGACAAGAAGA 1627
Query 1659 GACTGGAATCTGGGTACATCAACCAGGAACTGAAGTCTCACAGATTTGGGAACCAAGAAA 1718
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 GACTGGGATTTGGGTACATCAACCAGGAACTGAAGTCTCACAGATTTGGGAACCAAGAAA 1687
Query 1719 AGGCAAGAGTCGATGCCTTGATAACGAAATAC-GTGGTGCTGGCAGTGTCCGTTCCACTG 1777
||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||
Sbjct 1688 AGGCAAGAGTCGATGCCTTGATAACAAAATACAGTGC-GCTGGCAGTGTCCGTTCCACTG 1746
Query 1778 CATCTACGTCGCCCAACAAAGAAAGCAGCAGCACTGATGAAAATCAGGAAGGGAAGAGC- 1836
||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 1747 CATCTACGTCGCCCAACAATGAAAGCAGCAGCACTGATAAAAATCAGGAAGGGAAGAGCG 1806
Query 1837 ACGATGAAGTCTGTTGGTCGGGGATTGAAGAAAATCGGTTTAGTGTTCCATAAGAATGGA 1896
| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 1807 A-GATGAAGTCTGTTGGTTGGGGGCTGAAGAAAATCGGTTTAGTGTTCCATAAGAATGGA 1865
Query 1897 AAAAAGGAAGAATGTCATCATAAAGGGAACATTGAAGAGGATATCAGGTCTCCTCGGATT 1956
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1866 AAAAAGGAAGAATGTCATCATACAGGGAGCATTGAAGAGGATATCAGGTCTCCTCGGATT 1925
Query 1957 AATTTGAAGGCGTTAAATCAAAAGGATGTTGGGGTTAAGTTCATCGTTGAAGACAGGCTA 2016
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1926 AATTTGAAGGCGTTAAATCAAAAGGATGTTGGAGTTAAGTTCATCGTTGAAGACAGGCTA 1985
Query 2017 TCGGGGCCTCTCACAGGAAGAAGTCCAAAAGGTGAGAGCTTTGGTTCTGAAGACAGTCAG 2076
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1986 TCGGGGCCTCTCACAGGAAGAAGTCCAAAAGGTGAGAGCTTTGATTCTGAAGACAGTCAG 2045
Query 2077 CACAAGGGACACATGAAGGATGTTGCAAAGAGCATTCTAAAACATGCTGAAAAGTCTGCA 2136
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2046 CACAAGAGACACATGAAGGATGTTGCAAAAAGCATTCTAAAACATGCTGAAAAGTCTGCA 2105
Query 2137 AGACACCTTAAGCATGCTTTTTCGCGTAAAGGATCAAGGAAATCAAGAGATGACGAGTGT 2196
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2106 AGACACCTTAAGCATGCTTTTTCGCATAAAGGATCAAGGAAATCAAGAGATGACGAGTGT 2165
Query 2197 TCAACTGTGTCAGAGCAAGACTCTGAATGTC-AACGTGAAAATTCTGATGATGAATCTGT 2255
||||||||||||||||||||||||||||||| || |||||| ||||||||| ||||||
Sbjct 2166 TCAACTGTGTCAGAGCAAGACTCTGAATGTCTAA-GTGAAACTTCTGATGACAAATCTGC 2224
Query 2256 ATTTAGCAGTGTGCAGGACCTGGGAACACCAAGAACAGCAAAACTTGAAGGAAAAACTGT 2315
|||||||| ||||||||||||||| |||| ||||| |||||||||||||||||| |||||
Sbjct 2225 ATTTAGCAATGTGCAGGACCTGGGGACACTAAGAAGAGCAAAACTTGAAGGAAAGACTGT 2284
Query 2316 CAGGGGAGGTGAAGATGATAATGTAAATACATCAGCAAACTCCAAAGACGATTCGAAAGC 2375
|| || ||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 2285 CAAGGCAGGTGAAGATGATAATGTAAATACATCCGCGAACTCCAAAGACGATTCGAAA-- 2342
Query 2376 AGACATTTCGAAAAACAAAGAAACAAAGATAAATTTAGCAAACTTGGAAACTACATATAG 2435
| ||| |||| |||||||| || | || ||||||||||||||||||||||||
Sbjct 2343 A-ACAAG--GAAA--CAAAGAAA-AA---T---TT-AGCAAACTTGGAAACTACATATAG 2389
Query 2436 TGATGCCAGGAACTCTTTTGCTGGAGCCAAGAAAGTCACCACCCCCAAGAGTCGAAGGAT 2495
|||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |
Sbjct 2390 TGATGCCAGGAACTCTTTTGCTGGAGCCGAGAAAGTCACCACCCCCAAGAATCGAA--A- 2446
Query 2496 TGAAAAGGAATCATAGGTAAATAACCACAAGCTTGAGGATGAAAT-TTTGATTA-GCTTA 2553
| |||||||||||||||||| || |||||||||||||||| ||||||| | |||
Sbjct 2447 --A---GGAATCATAGGTAAATAATCAGAAGCTTGAGGATGAAAAATTTGATTTTG-TTA 2500
Query 2554 GCTGTAGATGTACGCCAAAGGATTCTTGTACAGCTTTTTAGTTTCGAGTCTTTGTCTTGC 2613
| ||||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||| |
Sbjct 2501 GTTGTAGATGTACTCCAAAGGACTCTTGTACAGCTTTTTAGTTTTGAGTCTTCGTCTTAC 2560
Query 2614 TT 2615
||
Sbjct 2561 TT 2562
Score = 344 bits (186), Expect = 2e-93
Identities = 259/292 (89%), Gaps = 13/292 (4%)
Strand=Plus/Plus
Query 22 TTGTTTCTTTGGT-CTTTTCTAACTAACACACATGAA--G-GACTCGATTCGGATGGTTT 77
|||||||||| || |||| ||||| |||||||||||| | |||||| ||||||||||||
Sbjct 81 TTGTTTCTTT-GTCCTTTCCTAACCAACACACATGAAGTGCGACTCGTTTCGGATGGTTT 139
Query 78 GGTTTCATGAGATTGGTGTTTGATCCCTCGGATTTAAG---AAAAAGCGAGAAACTTTGG 134
|||||||||||||| |||||||||| | ||||||||| ||||||| |||| ||||||
Sbjct 140 TGTTTCATGAGATTGTTGTTTGATCCTTTGGATTTAAGAAAAAAAAGCAAGAATCTTTGG 199
Query 135 ACTAGTTAAGTTGTTCATTTCTGGGTTTTGTAA-CGGAGGACG--TAA-AATAATGGAGT 190
||||||| |||||||| ||||||||||||||| | |||| | ||| |||||||||||
Sbjct 200 ACTAGTT-TGTTGTTCACTTCTGGGTTTTGTAACCAAAGGAAGTATAATAATAATGGAGT 258
Query 191 GTTCGGTAATCCATCATGTGGTGATTGTGTTACTGTTCCTTTGGGTTCTATCTTACTTGA 250
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 259 GTTCGGTAATCCATCATGTGGTGATTGTGTTACTGTTACTTTGGGTTCTATCTTACTTGA 318
Query 251 ATCGATCACACGCTCTTTTCTATTTCCTCTCGCTGGTTTATCTTTACCTGGT 302
||||||||||||| |||||||| ||||||| || |||||||||||||||||
Sbjct 319 ATCGATCACACGCGGTTTTCTATGTCCTCTCTCTCGTTTATCTTTACCTGGT 370
> AT1G53590.1 | Symbols: NTMC2TYPE6.1, NTMC2T6.1 | Calcium-dependent
lipid-binding (CaLB domain) family protein | chr1:19996315-20000265
FORWARD LENGTH=2635
Length=2635
Score = 1463 bits (792), Expect = 0.0
Identities = 1492/1821 (82%), Gaps = 83/1821 (5%)
Strand=Plus/Plus
Query 399 GGTTCATGAACGCTATGTGATGAGGTTGAGGAAG-AAACTACAGTTTGAAGAGAGGAAGC 457
|||||| ||||| ||||||||||| |||| | || ||| | ||||| |||||||||||||
Sbjct 358 GGTTCACGAACGGTATGTGATGAGATTGAAG-AGAAAATTGCAGTTCGAAGAGAGGAAGC 416
Query 458 AAGCTAACCAGAGAAGGGTTCTATCTGATTCTGAATCGGTGAGGTGGTTAAATCATGCTA 517
|||| || ||||||||||||||||||||||||||||| ||||| ||| | ||| |||||
Sbjct 417 AAGCAAATCAGAGAAGGGTTCTATCTGATTCTGAATCTGTGAGATGGATGAATTATGCTG 476
Query 518 TGGAGAAGATATGGCCTATTTGTATGGAACAGATTGCATCTCAGAAGATTCTACGTCCGA 577
|||||||||||||||| || || ||||||||||| || |||||||||||||| |||| |
Sbjct 477 TGGAGAAGATATGGCCAATATGCATGGAACAGATAGCGTCTCAGAAGATTCTGGGTCCAA 536
Query 578 TCATACCTTGGTTCTTGGACAAGTATAGACCTTGGACTGCGAAAAAAGCTGTGATACAAC 637
||||||||||||||||||| || |||||||||||||| |||||||||||||||||||| |
Sbjct 537 TCATACCTTGGTTCTTGGAAAAATATAGACCTTGGACAGCGAAAAAAGCTGTGATACAGC 596
Query 638 ACCTCTATTTGGGAAGAAACCCGCCTTTGTTGACAGATATAAGGGTGCTTCGGCAATCTA 697
|||| || ||||||||||||| ||| ||||||| ||||| ||||| ||||| |||||||
Sbjct 597 ACCTTTACATGGGAAGAAACCCACCTCTGTTGACTGATATTAGGGTCCTTCGTCAATCTA 656
Query 698 CGGGTGATGATCACTTGGTGCTGGAACTTGGAATGAATTTCCTCACAGCAGATGATATGA 757
||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||
Sbjct 657 CGGGTGATGATCACTTGGTACTGGAACTTGGTATGAATTTTCTCGCAGCAGATGATATGA 716
Query 758 GCGCAATACTCGCTGTGAAGTTAAGAAAAAGACTTGGGTTTGGAATGTGGACAAAGTTGC 817
| |||||||| |||||||| ||||| ||||| ||||| ||||| ||||||||||||||||
Sbjct 717 GTGCAATACTTGCTGTGAAATTAAGGAAAAGGCTTGGTTTTGGGATGTGGACAAAGTTGC 776
Query 818 ATTTGACAGGAATGCATGTTGAAGGAAAGGTGTTGATTGGAGTGAAGTTCCTTCGTCGAT 877
|||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| |
Sbjct 777 ATTTGACAGGAATGCACGTGGAAGGAAAGGTGTTGATCGGAGTGAAGTTCCTTCGTCGGT 836
Query 878 GGCCTTTTCT-GGGGCGTTTACGTGTTTGTTTTGCAGAGCCACCTTATTTCCAAATGACT 936
||||||| || ||||||||||||||| |||||||||||||| || |||||||| ||||||
Sbjct 837 GGCCTTT-CTTGGGGCGTTTACGTGTGTGTTTTGCAGAGCCTCCATATTTCCAGATGACT 895
Query 937 GTTAAACCAAT-TACCACTCATGGACTTGATGTTGCTGCGCTTCCAGGAATTGCAGGATG 995
||||||||||| | | |||||||| ||||||||||| | || ||||| || ||||||||
Sbjct 896 GTTAAACCAATCTTC-ACTCATGGGCTTGATGTTGCAGTACTCCCAGGTATCGCAGGATG 954
Query 996 GCTAGATAAACTT-TTGTCTGTCGCATTTGAGCAAACTCTTGTTGAGCCAAATATGCTGG 1054
||||||||||||| || ||| | |||||||| || || |||||| ||||||||||||| |
Sbjct 955 GCTAGATAAACTTCTT-TCTATAGCATTTGAACAGACCCTTGTTCAGCCAAATATGCTTG 1013
Query 1055 TAGTTGATATGGAGAAATTTGTTAGCCCAGA-GCCAGGAGAAAATTGGTTCTTTGTTGAT 1113
| ||||| ||||||||||||||||||||| | | ||| | ||| ||||||||||||||||
Sbjct 1014 TTGTTGACATGGAGAAATTTGTTAGCCCA-ACGTCAG-A-AAA-TTGGTTCTTTGTTGAT 1069
Query 1114 GAGAAAGAACCAGTAGCACACGCTCTT-GTTGAAGTCGTTGAAGCATCTGATGTTAAACC 1172
||||||||||| || ||||||| |||| ||||||||| |||||||||| ||| |||||||
Sbjct 1070 GAGAAAGAACCGGTTGCACACG-TCTTAGTTGAAGTCTTTGAAGCATCAGATCTTAAACC 1128
Query 1173 ATCAGATCTAAACGGTTTAGCTGATCCATATGTGAAAGGGCAGCTTGGCGCTTACAGATT 1232
||| |||||||| ||||| |||||||| |||||||||||| | ||||| |||||| ||||
Sbjct 1129 ATCTGATCTAAATGGTTTGGCTGATCCTTATGTGAAAGGGAAACTTGGTGCTTACCGATT 1188
Query 1233 CAAAACCAAGATACT-ATGGAAAACGTTGGCTCCTAAATGGCAAGAAGAGTTCAAGATAC 1291
|||||||||||||| | | ||||| ||| | || |||||||| |||||||| |||||||
Sbjct 1189 CAAAACCAAGATACAGAAG-AAAACATTGTCCCCGAAATGGCACGAAGAGTTTAAGATAC 1247
Query 1292 CAAT-TTGCACATGGGACTCCCCAAATATCCTTAACATTGAAGTTCAAGACAAAGACCGA 1350
|||| || |||||||| || || | ||| ||||||||||||||| |||||||||||||
Sbjct 1248 CAATCTTT-ACATGGGATTCTCCTAGTATACTTAACATTGAAGTTGGAGACAAAGACCGA 1306
Query 1351 TTTACCGATGACAGTCTTGGCGATTGTTCAGTGAACATTGCAGAGTTTCGAGGCGGCCAA 1410
||| ||||| | ||||| || ||||||||||| |||| ||||||| |||||||||||
Sbjct 1307 TTTGTGGATGATACCCTTGGTGAATGTTCAGTGAATATTGAAGAGTTTAGAGGCGGCCAA 1366
Query 1411 AGAAATGATATGTGGTTGCCTCTTCAGAACATTAAAATGGGGAGGCTGCACCTTGCTATA 1470
||||| |||||||||||| ||||||||||||| |||||||| ||||| || |||||||||
Sbjct 1367 AGAAACGATATGTGGTTGTCTCTTCAGAACATCAAAATGGGAAGGCTTCATCTTGCTATA 1426
Query 1471 ACCA-TACTTGAGGACGAGGCAAAGTTGAACGATGATCCGTTTGAAGGAGTGACAA-TAA 1528
|| | || |||||||| | || |||| || |||||||| || || || || || |||
Sbjct 1427 AC-AGTAATTGAGGACAATGCGAAGTCGAGTGATGATCCCTTAAAAAAAGCGA-AACTAA 1484
Query 1529 GTAAGGAAGACATGTGGGCTTCTTTTGCTTCCGACGTTACAAGTAAAGGTTCCTTCTCAT 1588
||||||||||| | ||||||||||||| || ||||| | ||| || ||||| |
Sbjct 1485 ACAAGGAAGACATACAGACTTCTTTTGCTTCTGATACTACAAATTTAGGCTCTTTCTCGT 1544
Query 1589 CAGTGGTATCTGACAAGTCTCCAAGGGTTCCTG-ATAA-TATGGAACCAATTAACATCGA 1646
| | | | | | || |||||||| ||| || |||| | || | ||||| || || ||
Sbjct 1545 C-G-G--A-C--A-AA-TCTCCAAGTGTTG-TGGATAACTTTG-AGCCAATAAAAATTGA 1593
Query 1647 AGGACAAGAAGAGACTGGAATCTGGGTACATCAACCAGGAACTGAAGTCTCACAGATTTG 1706
|| ||||||||||||| ||| ||||| || |||| ||| | ||||| |||||||||||
Sbjct 1594 CGGGCAAGAAGAGACTGCAATATGGGTTCAAAAACCGGGAGCAGAAGTATCACAGATTTG 1653
Query 1707 GGAACCAAGAAAAGGCAAGAGTCGATGCCTTGATAACGAAATACGTGGTGCTGGC-AGTG 1765
||||||||||||||| |||||| || | ||||||| | |||||| | | | | ||
Sbjct 1654 GGAACCAAGAAAAGGTAAGAGTAGACGTCTTGATAGCCAAATACAAAGAACCC-CTAATG 1712
Query 1766 TCCGTTCCACTGCATCTACGTCGCCCAACAAAGAAAGCAGCAGCACTGATGAAAATCAGG 1825
| || ||| | | | | ||| | ||||||||||||||| || ||||| |
Sbjct 1713 --------A-TGAATC-AT-T-G---AGCAATGGAAGCAGCAGCACTGACGACAATCAAG 1757
Query 1826 AAGGGA--AGAGCA-CGA-TGAAGTCTGTTGGTCGGGGATTGAAGAAAATCGGTTTAGTG 1881
| |||| | || | | | |||||||||||||| | ||||||| ||||||||| | | ||
Sbjct 1758 A-GGGATCAAAGAATCCAATGAAGTCTGTTGGTAGAGGATTGAGGAAAATCGGGTCAATG 1816
Query 1882 TTCCATAAGAATGGAAAAAAGGAAGAATGTCATCATAAAGGGAA-CATTGAAGAGGA-T- 1938
|| || | ||||| ||||||||||||| | | ||| || || ||||||||| || |
Sbjct 1817 TTTCACAGGAATGTCAAAAAGGAAGAATTTT-TAATA--GG-AAGCATTGAAGAAGAGTC 1872
Query 1939 A---TC--AGGTCTCCTCGGATTAATTTGAAGGC-GTTAAATCAAAAGGATGTTGGGGTT 1992
| || || ||||||||||| ||| ||||||| || ||| |||||||||||||| ||
Sbjct 1873 ACAGTCTCAG-TCTCCTCGGATCAATCTGAAGGCAGT-AAACCAAAAGGATGTTGGACTT 1930
Query 1993 AAGTTCATCGTTGAAGACAGGCTATCGGGGCCTCTCACAGG-AAGAAGTCCAAAAGGTGA 2051
|| ||||||||||| |||| || ||||| || || |||| |||| || | | |||||
Sbjct 1931 AACTTCATCGTTGATGACAATCTCTCGGGTCCACTTTCAGGCAAGA-GTTTAGATGGTGA 1989
Query 2052 GAGCTTTGGTT-CTGAAGACAGT-CAGC-ACAAGGGACACATGAAGGATGTTGCAAAGAG 2108
||| ||||| | | || || | | ||| | |||| || ||||||||||| ||||||||
Sbjct 1990 GAG-TTTGGATGCAGAGGAAAATTCAGGTA-AAGGC-CATATGAAGGATGTGGCAAAGAG 2046
Query 2109 CATTCTAAAACATGCTGA-AAAGTCTGCAAGACACCTTAAGCATGCTTTTTCGCGTAAAG 2167
|||| ||||| ||||| ||| ||||||| ||| | |||||||| ||||| |||||||
Sbjct 2047 TTTTCTGAAACAAGCTGAGAAA-TCTGCAAAACAGATAAAGCATGCGTTTTCCCGTAAAG 2105
Query 2168 GATCAAGGAAATCAAGAGATG 2188
|||| | |||| |||||||||
Sbjct 2106 GATCCATGAAACCAAGAGATG 2126
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 129832048484
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5