BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478912 Length=1559 Score E Sequences producing significant alignments: (Bits) Value AT3G14910.1 | Symbols: | unknown protein; Has 158 Blast hits t... 2266 0.0 > AT3G14910.1 | Symbols: | unknown protein; Has 158 Blast hits to 158 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | chr3:5015426-5017805 FORWARD LENGTH=1613 Length=1613 Score = 2266 bits (1227), Expect = 0.0 Identities = 1478/1594 (93%), Gaps = 38/1594 (2%) Strand=Plus/Plus Query 1 TTAGCGATGGCGAAGAGGATCCACCTGACGGAACTAGGCTGCATCGCGTGTGAGGAACTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTAGCGATGGCGAAGAGGATCCACCTGACGGAACTAGGCTGCATCGCGTGTGAGGAACTT 60 Query 61 AGC-GAGCTCGGTGCGGGTAAAGAAGGGTGGCTCGTGAATAATCCAAACCTATTGTGTGC 119 | | ||||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||| Sbjct 61 A-CTGAGCTCGGTGCGGGTAAAGAAGGATGGCTCGTGAACAATCCAAACCTTTTGAGTGC 119 Query 120 ACTCGATTCTCACTCTTTAGCCCTAGCTAACCGATTTCTCATCTTGATTGTGAATTGGGG 179 ||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct 120 ACTTGATTCTCACTCTTTAGCCCTAGCCAATCGATTTCTCATATTGATTGTGAATTGGGG 179 Query 180 TGATCCTGATGCGCCTCGTGTTAAGATCAGACCCGATCTGTCTCCGATTGAGGCTGAGTC 239 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 180 TGATCCTGATGCGCCTCGTGTCAAGATCAGACCTGATCTGTCTCCGATTGAGGCTGAGTC 239 Query 240 GATTACGGCGATCGAATGGTTAGTGTTTGATGACGTCAGAGTCGTCGTTGCGGGGACTTC 299 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 240 GATTACGGCGATCGAGTGGTTAGTGTTTGATGATGTCAGAGTCGTCGTTGCGGGGACTTC 299 Query 300 TTGTGGGTATCTCTTGGTTTACTCTGTTGCCGGTGATCTGATTCATAAGCAGATGGTACA 359 |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| Sbjct 300 TTGTGGATATCTCTTGGTTTACTCTGTTACCGGTGATCTGATCCATAAGCAGATTGTACA 359 Query 360 CCCAAGTCGTATATTGAAAATAAGAGTTCGAGGAACTAAGAAGGATTTGATGCAAGAGAC 419 | ||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 360 TCAAAGCCGTATATTAAAAATAAGAGTTCGAGGAACTAAGAAAGATTTGATGCAAGAGAC 419 Query 420 ATCCTCTGAGGAGATTTGCATTGTATTGCCTGGCATTATTGCCCGCTTTGATGGCTCCAA 479 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 420 ATCCTCTGAGGAGATTTGCATTGTATTGCCTGGTGTTATTGCCCGCTTTGATGGCTCTAA 479 Query 480 TATTCAGAGTATGCTTCAGAAATGGTTTCAAGAGAAGAATTCTAATTTTTGGGACCAAAA 539 |||||||||||| ||||||||||| |||||||||||||||| || |||||||||||||| Sbjct 480 CATTCAGAGTATGGTTCAGAAATGGGTTCAAGAGAAGAATTCGAACTTTTGGGACCAAAA 539 Query 540 GAATAGAAAGGGTGATGTAGAAGATTCTGGTAGTTTGTACCAACGACTACCGTATCAGAT 599 |||||||||||| |||| ||||||| ||||||| ||||||||||| |||||||||||||| Sbjct 540 GAATAGAAAGGGAGATGCAGAAGATACTGGTAGCTTGTACCAACGTCTACCGTATCAGAT 599 Query 600 ATGGAATGTCAACAAGAATGGTGTGTGCGTTGATGCTACTGTCACTGGCGTAATGCCTCC 659 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 600 ATGGAATGTCAACAAGAATGGTGTGTGTGTTGATGCTACTGTCACTGGCGTAATGCCTCC 659 Query 660 TCCGTTACTAGAACTTCAGTCAAGTCAACGTTATTATTGTGCAGTGACCATTGGAGAGGA 719 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 TCCGTTACTGGAACTCCAGTCAAGTCAACGTTATTATTGTGCAGTGACCATTGGAGAGGA 719 Query 720 TGCTGTAATCTCAGCTTACAGGCTCTCAGAAGATAGAGGGAGATCACTTGTTGGAGCGAT 779 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 TTCTGTAATCTCAGCTTACAGGCTCTCAGAAGATAGAGGGAGATCACTTGTTGGAGCGAT 779 Query 780 TCTTTCAAAAGTTGTGCCTGCAGCTGCTTCAACCATAGCTTCTTTTTCTAAACTGATCTG 839 ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 780 TCTATCAAAAGTTGTGCCTGCAGCTGCTTCAACGATAGCTTCTTTCTCTAAACTGATCTG 839 Query 840 GAGAAGTAATGATCAATCACCAAAGCGAAAACCAGAAGCCAAGACCCAGTCATTCGCTAG 899 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | Sbjct 840 GAGAAGTAATGATCAATCACCAAAGCGAAAGCCAGAAGCCAAGACTCAGTCATTCGCTCG 899 Query 900 AGCATCATCCTTGACATGTATAAAGGACTACCCAAGGAAAGGCGAGAAGCTCACGTTATC 959 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 900 AGCATCGTCCTTGACATGTATAAAGGACTACCCAAGGAAAGGAGAGAAGCTCACGTTATC 959 Query 960 CCCAAGTGGGACATTAGCTGCGATAACAGATTCTCTTGGTCGAATACTTCTGCTAGATAC 1019 ||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 960 CCCGAGTGGAACATTAGCTGCCATAACAGATTCTCTTGGTCGAATACTTCTGCTAGACAC 1019 Query 1020 TCAAGCTCTCGTAGTTGTCCGGCTATGGAAGGGTTATCGTGATGCAAGCTGCGTGTTCAT 1079 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1020 TCAAGCTCTTGTAGTTGTCCGGCTATGGAAGGGTTATCGTGATGCAAGCTGTGTGTTCAT 1079 Query 1080 GGAGATGTTAGCCAAAAAAGATAAAGGAAAATCTGTAATTCACACAGAACCGGTAAAAAG 1139 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1080 GGAGATGTTAGCCAAAAAAGATAAAGGAAAATCTGTGATTCACACAGAACCGGTAAAAAG 1139 Query 1140 CGATTACTGTCTATGCTTAGCCATTCACGCTCCACGCAAAGGCATCATCGAGGTGTGGCA 1199 ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1140 TGATTATTGTCTATGCTTAGCCATTCATGCTCCACGCAAAGGCATCATCGAGGTGTGGCA 1199 Query 1200 GATGAGAACGGGGCCACGTCTTCTAACCATTCAATGTGCAAACGGTAGCAAATTGTTGCA 1259 ||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| Sbjct 1200 GATGAGAACGGGGCCACGTCTTCTAACGATTCAATGCGCAAAAGGTAGCAAATTGTTGCA 1259 Query 1260 GCCAGCGTACAGGTTTGGATCAAATTCTTCATCATCTCCTTATATTCCTCTTGAAGTCTT 1319 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1260 GCCAGCGTACAGGTTTGGATCAAATTCTTCATCTTCTCCTTACATTCCTCTTGAAGTCTT 1319 Query 1320 CTTACTCAATGGAGATTCCGGCCAAGTCTCTATGCTCAACCGA--TCTCTC--------T 1369 ||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct 1320 CTTACTCAATGGAGATTCCGGCCAAGTCTCTATGCTCAACCGATCTCTCTCTTAAAATAT 1379 Query 1370 CT-T-AA--AA-ATAT--C-----T-CTA-A---ACTAAC-TT-ATC--tttttttCTCA 1408 || | || || |||| | | || | || ||| || || ||||||||||| Sbjct 1380 CTCTAAACTAACATATCACGAATTTGATATATTCACCAACTTTCTTCAGTTTTTTTCTCA 1439 Query 1409 AACCTTTTGTCCATAGCTAAGCCAAGTCTCTAATTAATGATGTTTTCTAA-ACAAAAACA 1467 ||||||||||| ||||||||||||||||||||||| || || | | || | |||| Sbjct 1440 AACCTTTTGTCAATAGCTAAGCCAAGTCTCTAATTGATTATAAGTGC-AATTGATGAACA 1498 Query 1468 AGAACTTTGCAATGATTCTTAAAGTGTAGTAG---TCAGTGTTTATGTTTTTCTTTTGAT 1524 |||||||||||||||||||||| ||||||||| || |||||||||||| ||||||||| Sbjct 1499 AGAACTTTGCAATGATTCTTAATGTGTAGTAGTAATCGGTGTTTATGTTTATCTTTTGAT 1558 Query 1525 AGTTGGATTTGATCATATGATTGTAACTAGATAC 1558 |||||||||||||||||||||||||||||||||| Sbjct 1559 AGTTGGATTTGATCATATGATTGTAACTAGATAC 1592 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76957435485 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5