BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478964 Length=2226 Score E Sequences producing significant alignments: (Bits) Value AT3G15340.1 | Symbols: PPI2 | proton pump interactor 2 | chr3:5... 2996 0.0 AT5G36690.1 | Symbols: | AT5G36690 and AT5G36780 represent ide... 1110 0.0 AT5G36780.1 | Symbols: | AT5G36780 and AT5G36690 represent ide... 1110 0.0 > AT3G15340.1 | Symbols: PPI2 | proton pump interactor 2 | chr3:5159698-5162841 REVERSE LENGTH=2293 Length=2293 Score = 2996 bits (1622), Expect = 0.0 Identities = 2052/2252 (91%), Gaps = 59/2252 (3%) Strand=Plus/Plus Query 1 tttttttctctctttagatttca-------tttttttCCCAGTAATCAAATTAAAATTTG 53 ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| Sbjct 67 TTTTTTTCTCTCTTTAGATTTCATTTCTTTTTTTTTTTCCAGTAATCAAATTAAACTTTG 126 Query 54 CCTCTTTCAGTCC-AAAACCCTGAGATTTTTGGGAGAATCTCTGTGACACTCATTTCTTT 112 |||| ||||| || ||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 127 CCTC-TTCAGCCCAAAAACCCTGAGATTTTTGGGAGAATCTGTGTGACACTCATTTC-TT 184 Query 113 CTTTCTAGGAAAGAATCCAAAATGGGTTCGGAGATTATACTCTGTGATGGCTTCGAGGTG 172 ||||||||||||||||| ||||||||| || | |||||||||| ||| |||||||||||| Sbjct 185 CTTTCTAGGAAAGAATCAAAAATGGGTGCGCAAATTATACTCTCTGAAGGCTTCGAGGTG 244 Query 173 GTTCCTCCGCC---GATAAACGATTTGATACTCTTCGGAAG-AGGCCAATCTGTATCAAG 228 ||||||||||| ||| ||||||||| ||||||||||||| | ||||||||||||||| Sbjct 245 GTTCCTCCGCCGGAGATGAACGATTTGGTACTCTTCGGAAGCA-ACCAATCTGTATCAAG 303 Query 229 TTGCGATGTATCAACGATCACTACCGAAGAAGACGGCACTGTTTTTTCCGGTGATAGTTC 288 |||||||||||||||| |||| ||| ||||| |||||||||||||||||||||||||| Sbjct 304 TTGCGATGTATCAACGGTCACCACC---GAAGATGGCACTGTTTTTTCCGGTGATAGTTC 360 Query 289 GCCGGGAGGTGCAGCTGAAGAGGATTGGCCTGAAGATAAATCTTTATCGTTT-TACTTTG 347 |||||||||||| |||||||||||| |||||||| ||| |||| || ||| ||||||| Sbjct 361 ACCGGGAGGTGCAACTGAAGAGGATTTCCCTGAAGAGAAACCTTTCTC-TTTCTACTTTG 419 Query 348 TTAAGCAACCAGCTTACGATGATCCCGAGATCCAAGCCAAGATCGATGAAGCTGGTCATG 407 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 420 TTAAGCAACCAGCTTACGATGATCCCGAGATCAAAGCTAAGATCGATGAAGCTGGTCATG 479 Query 408 AGATTAAGC-ACTGTAATCAACTCCGTATTGGTGTCTCCAGTGCTCAGAAATCCGAAAAG 466 ||||||| | | | |||| || ||| |||| |||||||| ||||||| ||||||||||| Sbjct 480 AGATTAATCGA-TATAATAAAGACCGAATTGTTGTCTCCAATGCTCAGGAATCCGAAAAG 538 Query 467 GCTGAGATTTCGTCTTTGTTT--TCACATATGGTGAGTTTGACTCCTAAATCAGAAGGAT 524 |||||||||| |||| ||||| ||| | ||| ||||||| | ||||||| ||||||| Sbjct 539 GCTGAGATTTTGTCTCTGTTTGGTCA-A-ATGAAGAGTTTGGTTTCTAAATCGGAAGGAT 596 Query 525 ATAGAGTGGTTTTTGAAGAGAAGAAGAGGGAATTTGATACTCTACAAGAAGCTCTACGGA 584 ||||||||||| ||||||||||||||| |||||||||| ||||||| ||| ||||||||| Sbjct 597 ATAGAGTGGTTATTGAAGAGAAGAAGATGGAATTTGATGCTCTACATGAATCTCTACGGA 656 Query 585 ATCTCCGGTGCTCTACTAGTGATCAACTTTGTTTTTCAAAGGAGGAACTCGATCATCTTA 644 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 657 ATCTCCGGTGCTCTACTAGTGATCAACTTTGTTTTTCGAAGGAGGAGCTCGATCATCTTA 716 Query 645 TGTATATAGCTCATTATCAGATTGAACATGGTAGCATTGGTTTGGAGGAAGAAGATTGGG 704 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 717 TTTATATAGCTCATTATCAGATTGAACATGGTAGCATTGGTTTTGAGGAAGAAGATTGGG 776 Query 705 TGCTTAAAGAGACCGAGAAGCCTGATGGGATAGTTCTAAGTGAGGATTCTCTTGCGGAGA 764 ||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 777 TGCTTAAGGAGACTGAGAAGGCTGATGGGATAGTTCTAAGTGAGGATTCTCTTGCGGAGA 836 Query 765 AAGAAGCTTCCATAAACCGTGTTAAGTCTAAGGCCGTGGAATTGTATCAAGTAAAGAAGG 824 ||||||| |||||||||||||| ||||||| ||| ||||||||| || |||||||||||| Sbjct 837 AAGAAGCCTCCATAAACCGTGTCAAGTCTATGGCTGTGGAATTGAATGAAGTAAAGAAGG 896 Query 825 AGCTCGATGCGATTACATGGAAGATAAACC-TCTTG-GCTGAAAAAATGGGGAAGAGTCG 882 |||| ||||||||||||||||||||||||| | ||| | ||| ||| |||||||||||| Sbjct 897 AGCTTGATGCGATTACATGGAAGATAAACCAT-TTGAG-TGACAAAGTGGGGAAGAGTCA 954 Query 883 GAACAAGATCAAGATTTTGGATGTAGAACTGGCACACATACTTGAG-AAGAGGGACAGAT 941 |||||| ||| | ||||||||||| || |||||||||||||||| || |||||||||| Sbjct 955 GAACAACCTCAGGGTTTTGGATGTAAAAAAGGCACACATACTTGAGGAA-AGGGACAGAT 1013 Query 942 CCTATGAAAGGATTAGGATGTTGAGGATACAACGAGACAAAGGGAAAGATGCCTTTTTCG 1001 ||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| | Sbjct 1014 CCTATGAAAGGATTAAGATGTTGAGAATACAACGAGACAAAGGGAAAGCTGCCTTTTACC 1073 Query 1002 AGAGCCTTCCTGTTATGAGGAAAGCTAAAGAATTGGCTGCTTCTGGAAATGTTCGAGATC 1061 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct 1074 AGAGCCTTCCTGTTATGAGGAAAGCTAGAGAATTGGCTGCTTCTGGAAATGTTAGAGATC 1133 Query 1062 TTGAAGTGTTTGCCAACTCTGAGGTTGAAAGATTCATGACTCATTGGAATGATGACAAGG 1121 ||||||||||||||| ||| |||| ||| |||||||||||||| |||||||||||||||| Sbjct 1134 TTGAAGTGTTTGCCAGCTCCGAGGCTGATAGATTCATGACTCAATGGAATGATGACAAGG 1193 Query 1122 CTTTTAGGGATGATTACGTAAAAAGAATCTCGCTTTCACTTTGTGAAAGACAGCTGAACC 1181 |||||||||||||||||||||||||||| || | |||||| ||||||||||||||||||| Sbjct 1194 CTTTTAGGGATGATTACGTAAAAAGAATATCTCCTTCACTATGTGAAAGACAGCTGAACC 1253 Query 1182 AAGATGGCCGGATTAAAGATCCTGAAGTTCAGGTTGTTGGGGAAAAGCAAGTACCGGTTA 1241 ||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||||||| Sbjct 1254 AAGATGGTCGGATTAAAGATCCTGAAGTTCAGGTTGTTTGGGAAAAGAAAGTGCCGGTTA 1313 Query 1242 AGACTATGAAGGGAGGCGAGAAGGTTCACAAGACGAATAGAGAAGATCCCAGCTCCAACT 1301 || | | |||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 1314 AG-----G--G--AGGCGAGAAGGTTCACGAGACGAATAGAGAAGATTCCAGCTCCAACT 1364 Query 1302 TGTTTCAAGATGGAAGTGTAATTATAGATAAACCAACACAAGAGACGAGGAAAAAGGCGA 1361 || |||| ||||||||||||||| |||||||| || | |||| |||||||||||||||| Sbjct 1365 CGTCTCAATATGGAAGTGTAATTACAGATAAACGAAAAAAAGAAACGAGGAAAAAGGCGA 1424 Query 1362 TGGATTTCAACAGGTCAAGTGCTGAGGAGAGTGATGTTATAGATTTGGAATTCCCGGTGT 1421 |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| Sbjct 1425 TGGATTTCAACAGGTCGAGTGCTGAGGAGAGTGATGTTACAGATTTGGAATTCTCGGTGT 1484 Query 1422 ATgagaaaccaaagaaggaagaagaagaggtcgatgaagaaactttgaaggagaggaaaa 1481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1485 ATGAGAAACCAAAGAAGGAAGAAGAAGAGGTCGATGAAGAAACTTTGAAGGAGAGGGAAA 1544 Query 1482 gagaagagcagttagagaaagCTCGGTTAGCGATGGAAAGGAAGAGgaagctgcaagaga 1541 |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct 1545 GAGAAGAGCAGTTAGAGAAAGCCCGGTTAGCAATGGAAAGGAAGAGGAAGCTTCAAGAGA 1604 Query 1542 aagctgctgctaaagctgctataagagctcaaaaggaagctgaaaagaaaCTCAAGGAGT 1601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1605 AAGCTGCTGCTAAAGCTGCTATAAGAGCTCAAAAGGAAGCTGAAAAGAAACTCAAGGAGT 1664 Query 1602 GTGAGAAAAAGGCGAAGAAGAAAGCTGC---AAATTCTTCTTCTCCTTCAGAATCAGACC 1658 ||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 1665 GTGAGAAGAAGGCCAAGAAGAAAGCTGCTGCAAATTCTTCCTCTCCTTCAGAATCAGACC 1724 Query 1659 AATCACAAGAAGTTATCAATGAGCTGGAAAAGGGTAGGACTTTAGCTGTTTCAG-TGAAA 1717 | ||||||||||| | ||| || |||||||||| ||||||| |||| ||||||| | ||| Sbjct 1725 ACTCACAAGAAGTAACCAAAGACCTGGAAAAGGTTAGGACTCTAGCAGTTTCAGGT-AAA 1783 Query 1718 GAGAAACCCCAAAAGGAGAGATCATTGTTTCCAAAGCAGAGAAGTTTCAGGTACAAACAC 1777 || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1784 GAAAAACACCAAAAGGAGAGATCATTGTTTCCAAAGCAGAGAAGTTTCAGGTACAAACAC 1843 Query 1778 CGCGGAAGAGGAACCGAAGCTCTCCCTAAGGCAATCCTAAACCGTAGAAGGGCTCAAAAA 1837 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| Sbjct 1844 CGCGGAAGAGGAACCGAAGCTCTCCCTAAGGCCATCCTAAACCGTAGAAAGGCTCATAAA 1903 Query 1838 TATTGGGTTTGGGGACTTTCATCTGCTGCACTTGCTGTCGCACTCTTCCTTGTGGTTTTA 1897 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1904 TATTGGGTTTGGGGACTTTCATCTGCTGCACTTGCTGTCGCACTCTTCCTTGTGGTTTTA 1963 Query 1898 CTTCTACGGTAAACTGGGAAAGGAAAGAGACATTAAAAAGGTTTTGACTCTGCCTAATTG 1957 ||||||||||||| || |||||||||||||||||||| |||||| || | |||||||| | Sbjct 1964 CTTCTACGGTAAATTGAGAAAGGAAAGAGACATTAAAGAGGTTT-GAGTTTGCCTAATGG 2022 Query 1958 -GAGATGGAGCAAGTGAAGGAAGAGCTGCTTCTGGACTTTCAAAGTTAGCTTTTAGTTTC 2016 ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2023 AGAGATAGAGTGAGTGAAGGAAGAGCTGCTTCTAGACTTTCAAAGTTAGCTTTTAGTTTC 2082 Query 2017 ATAACCTTAGATGTTAGTTAATATGTATCTGTCTCTTTGGAGAGTTGTCTTaaaaaaaaG 2076 ||||||||||||||| |||||||||| |||||||||| |||||||||| | | ||||||| Sbjct 2083 ATAACCTTAGATGTTGGTTAATATGTTTCTGTCTCTTCGGAGAGTTGTGTGATAAAAAAG 2142 Query 2077 AGAAACATCCTAATTGTTAGTAGGAGCTTCTGAAAGTCCATAGAGACTCCATGTTGTCTT 2136 |||||||||||||| || | |||||||| ||||||||||||||||||||||||||| Sbjct 2143 AGAAACATCCTAAT----AG--G-AGCTTCTGTAAGTCCATAGAGACTCCATGTTGTCTT 2195 Query 2137 TATGTGAACATTGTGGATTGAATCCACTTTATAGT-TAGTCAAGTATCTTGACTA-ACTA 2194 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | || Sbjct 2196 TATGTGAACATTGTGGATTGAATCCACTTTATA-TCTAGTCAAGTATCTTGACTACA-TA 2253 Query 2195 TATACTTAGAAATTGCAAATAACATAAAGCTT 2226 |||||||||||||||||||||||||||||||| Sbjct 2254 TATACTTAGAAATTGCAAATAACATAAAGCTT 2285 > AT5G36690.1 | Symbols: | AT5G36690 and AT5G36780 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing. | chr5:14415185-14417288 REVERSE LENGTH=1731 Length=1731 Score = 1110 bits (601), Expect = 0.0 Identities = 1014/1208 (84%), Gaps = 49/1208 (4%) Strand=Plus/Plus Query 144 AGATTATACTCTGTGATGGCTTCGAGGTGGTTCCTCCG-CC--GATAAACGATTTGATAC 200 |||||||| |||||||||||||||||||||||||| || || |||||||||| | || | Sbjct 11 AGATTATATTCTGTGATGGCTTCGAGGTGGTTCCTTCGCCCGAGATAAACGATCTAATTC 70 Query 201 TCTT-CGGAA-GAGGCCAATCTGT-ATCAAGTTGCGATGTATCAACGATCACTACCGAAG 257 | || | ||| | | ||||||| | | ||| | |||| | || || | | | | ||||| Sbjct 71 T-TTAC-GAATGCGACCAATCTTTGA-CAAATAGCGA-G-GTC-ACCA-C-CGA-CGAAG 121 Query 258 AAGACGGCACTGTTTTTTCC---GGTGATAGTTCGCCGGGAGGTGCAGCTGAAGAGGATT 314 |||| | |||| |||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct 122 AAGAAGACACTATTTTTTCCGGTGGTGATAGTTCATCGGGACTTGCAGCTGAAGAGGATT 181 Query 315 GGCCTGAAGATAAATCTTTATCGTTT-TACTTTGTTAAGCAACCAGCTTACGATGATCCC 373 | ||| ||||||| || | || ||| ||| ||||||||||||| | ||||||| ||||| Sbjct 182 CGTCTGGAGATAAACCTCTCTC-TTTCTACATTGTTAAGCAACCTGTTTACGATAATCCC 240 Query 374 GAGATCCAAGCCAAGATCGATGAAGCTGGTCATGAGATTAAGCACTGTAATCAACTCCGT 433 ||||| |||||||||||||||||||| ||| |||||| | |||||| ||||||| Sbjct 241 GAGATTAAAGCCAAGATCGATGAAGCTAATCAGGAGATTTTTCGTTGTAATGAACTCCGA 300 Query 434 ATTGGTGTCTCCAGTGCTC-AGAAATCCGAAAAGGCTGAGATTTCGTCTTTGTTTTCACA 492 || ||||| || || | ||||||||||| ||||||| |||||||||||| | | || Sbjct 301 ATCAATGTCTTGAGCGC-CAAGAAATCCGAACTGGCTGAGGTTTCGTCTTTGTATACTCA 359 Query 493 TATGGTGAGTTTGACTCCTAAATCAGAAGGATATAGAGTGGTTTTTGAAGAGAAGAAGAG 552 |||| ||||||| |||| |||| |||||||||||| ||||| ||||||||||||||| Sbjct 360 AATGGAGAGTTTGGTTCCTCAATCTGAAGGATATAGAATGGTTATTGAAGAGAAGAAGAA 419 Query 553 GGAATTTGATACTCTACAAGAAGCTCTACGGAATCTCCGGTGCTCTACTAGTGATCAACT 612 ||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 420 GGAGTTTGATACTCTACTTGAAGCTCTACGGAATCTCCGGTGCACTACTAGTGATCAACT 479 Query 613 TTGTTTTTCAAAGGAGGAACTCGATCATCTTATG-TATATAGCTCATTATCAGATTGAAC 671 ||||||| ||||||||||||| |||||||||| | ||||||||||| |||||||||||| Sbjct 480 TTGTTTTACAAAGGAGGAACTTGATCATCTTA-GTTATATAGCTCAGTATCAGATTGAAT 538 Query 672 ATGGTAGCATTGGTTTGGAGGAAGAAGATTGGGTGCTTAAAGAGACCGAGAAGCCTGATG 731 |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| Sbjct 539 ATGGTAGCATTGGTTTGGAGGAAGAAGATTGGATGCTTAAGGAGACTGAGAAGCCTGATG 598 Query 732 GGAT-AGTTCTAAGTGAGGATTCTCTTGCGGAGAAAGAAGCTTCCATAAACCGTGTTAAG 790 |||| | |||| | | | | |||||||||||||||||||| ||||| ||| Sbjct 599 GGATCA-TTCT-A---A-G-------T---GAGAAAGAAGCTTCCATAAATCGTGTCAAG 642 Query 791 TCTAAGGCCGTGGAATTGTATCAAGTAAAGAAGGAGCTCGATGCGATTACATGGAAGATA 850 |||| ||| |||||||| || |||||||||| ||||| ||||||||||| ||||||||| Sbjct 643 TCTATGGCTTTGGAATTGAATGAAGTAAAGAATGAGCTTGATGCGATTACTTGGAAGATA 702 Query 851 AAC--CTCTTGGCTGAAAAAATGGGGAAGAGTCGGAACAAGATCAAGATTTTGGATGTAG 908 ||| | || | ||| ||| || ||||||||| ||||| || | | |||||||| | | Sbjct 703 AACGAC-CTAAG-TGACAAATTGTGGAAGAGTCAAAACAACATTAGGGTTTTGGATTTGG 760 Query 909 AACTGGCACACATACTTGAGAAGAGGGACAGATCCTATGAAAGGATTAGGATGTTGAGGA 968 || |||||||||||||||||||||||| |||| |||| |||||||| ||||||||||| Sbjct 761 AAAAGGCACACATACTTGAGAAGAGGGATAGATTTTATGCAAGGATTAAGATGTTGAGGA 820 Query 969 TACAACGAGACAAAGGGAAA-GATGCCTTTTTCGAGAGCCTTCCTGTTATGAGGAAAGCT 1027 |||||||||||||| ||||| | ||| |||||| |||||||| |||||||| | |||||| Sbjct 821 TACAACGAGACAAA-GGAAATGCTGCATTTTTCCAGAGCCTTTCTGTTATGTGTAAAGCT 879 Query 1028 AAAGAATTGGCTGCTTCTGGAAATGTTCGAGATCTTGAAGTGTTTGCCAACTCTGAGGTT 1087 ||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||| Sbjct 880 AAAGAATTGGCTGCTTCTGGAAATGTTAGAGAGCTTGAAGTGTTTGCTAGCTCTGAGGTT 939 Query 1088 GAAAGATTCATGACTCATTGGAATGATGACAAGGCTTTTAGGGATGATTACGTAAAAAGA 1147 || ||||||||||||| |||||||||||| |||||||||||||| |||||||||| |||| Sbjct 940 GATAGATTCATGACTCTTTGGAATGATGATAAGGCTTTTAGGGAAGATTACGTAAGAAGA 999 Query 1148 ATCTCGCTTTCACTTTGTGAAAGACAGCTGAACCAAGATGGCCGGATTAAAGATCCTGAA 1207 ||||||| |||||| ||||||||| | |||||| ||||||||||||| |||||| |||| Sbjct 1000 ATCTCGCATTCACTATGTGAAAGAGAACTGAACGAAGATGGCCGGATAAAAGATGCTGAC 1059 Query 1208 GTTCAGGTTGTTGGGGAAAAGCAAGTACCGGTTAAGACTATGAAGGGAGGCGAGAAGGTT 1267 ||||| || || |||||||| |||| |||||||||||||| ||| || ||||||||||| Sbjct 1060 CTTCAGATTTTTTGGGAAAAGAAAGTGCCGGTTAAGACTATAAAGCGAAGCGAGAAGGTT 1119 Query 1268 CACAAGACGAATAGAGAAGATCCCAGCTCCAACTTGTT-TCAAGATGGAAGTGTAATTAT 1326 || |||| ||||||||||||| | ||||| |||| || | ||||||||| |||||||| Sbjct 1120 CATAAGATGAATAGAGAAGATTCAAGCTCTAACTC-TTCTGAAGATGGAAATGTAATTAC 1178 Query 1327 AGATAAAC 1334 |||||||| Sbjct 1179 AGATAAAC 1186 Score = 361 bits (195), Expect = 2e-98 Identities = 281/320 (88%), Gaps = 15/320 (5%) Strand=Plus/Plus Query 1593 TCAAGGAGTGTGAGAAAAAGGCGAAGAAGAAA---GCTGCAAATTCTTCTTCTCCTTCAG 1649 |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 1424 TCAATGAGTGTGAGAAAAAGGCGAAGAAGAAAGCTGCTGCAAATTCTACTTCTCCTTCAG 1483 Query 1650 AATCAGACCAATCACAAGAAGTTATCAATGAGCTGGAAAAGGGTAGGACTTTAGCTGTTT 1709 ||||||||||| | | |||||||| || |||||| |||||| ||||| |||| Sbjct 1484 AATCAGACCAA------GTA---ATCAATGA--TG-AAAAGGTTAGGACATTAGCAGTTT 1531 Query 1710 CAGTGAAAGAGAAACCCCAAAAGGAGAGATCATTGTTTCCAAAGCAGAGAAGTTTCAGGT 1769 ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| Sbjct 1532 CAGGGAAAGAGAAACACCAAAAGGAGAGATTGTTGTTTCCAAAGCAGAGAAGTTTTAGGT 1591 Query 1770 ACAAACACCGCGGAAGAGGAACCGAAGCTCTCCCTAAGGCAATCCTAAACCGTAGAAGGG 1829 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || Sbjct 1592 ACAAACACCGCGGAAGCGGAACCGAAGCTCTCCCTAAGGCCATCCTAAACCGTAGAAAGG 1651 Query 1830 CTCAAAAATATTGGGTTTGGGGACTTTCATCTGCTGCACTTGCTGTCGCACTCTTCCTTG 1889 ||| ||||||||||||||||||||| |||||||||||||| ||| | ||| |||||| Sbjct 1652 CTCGTCGATATTGGGTTTGGGGACTTTCTTCTGCTGCACTTGCGGTCTCGCTCGTCCTTG 1711 Query 1890 TGGTTTTACTTCTACGGTAA 1909 |||||||||||||| ||||| Sbjct 1712 TGGTTTTACTTCTAAGGTAA 1731 > AT5G36780.1 | Symbols: | AT5G36780 and AT5G36690 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing. | chr5:14474485-14476588 REVERSE LENGTH=1731 Length=1731 Score = 1110 bits (601), Expect = 0.0 Identities = 1014/1208 (84%), Gaps = 49/1208 (4%) Strand=Plus/Plus Query 144 AGATTATACTCTGTGATGGCTTCGAGGTGGTTCCTCCG-CC--GATAAACGATTTGATAC 200 |||||||| |||||||||||||||||||||||||| || || |||||||||| | || | Sbjct 11 AGATTATATTCTGTGATGGCTTCGAGGTGGTTCCTTCGCCCGAGATAAACGATCTAATTC 70 Query 201 TCTT-CGGAA-GAGGCCAATCTGT-ATCAAGTTGCGATGTATCAACGATCACTACCGAAG 257 | || | ||| | | ||||||| | | ||| | |||| | || || | | | | ||||| Sbjct 71 T-TTAC-GAATGCGACCAATCTTTGA-CAAATAGCGA-G-GTC-ACCA-C-CGA-CGAAG 121 Query 258 AAGACGGCACTGTTTTTTCC---GGTGATAGTTCGCCGGGAGGTGCAGCTGAAGAGGATT 314 |||| | |||| |||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct 122 AAGAAGACACTATTTTTTCCGGTGGTGATAGTTCATCGGGACTTGCAGCTGAAGAGGATT 181 Query 315 GGCCTGAAGATAAATCTTTATCGTTT-TACTTTGTTAAGCAACCAGCTTACGATGATCCC 373 | ||| ||||||| || | || ||| ||| ||||||||||||| | ||||||| ||||| Sbjct 182 CGTCTGGAGATAAACCTCTCTC-TTTCTACATTGTTAAGCAACCTGTTTACGATAATCCC 240 Query 374 GAGATCCAAGCCAAGATCGATGAAGCTGGTCATGAGATTAAGCACTGTAATCAACTCCGT 433 ||||| |||||||||||||||||||| ||| |||||| | |||||| ||||||| Sbjct 241 GAGATTAAAGCCAAGATCGATGAAGCTAATCAGGAGATTTTTCGTTGTAATGAACTCCGA 300 Query 434 ATTGGTGTCTCCAGTGCTC-AGAAATCCGAAAAGGCTGAGATTTCGTCTTTGTTTTCACA 492 || ||||| || || | ||||||||||| ||||||| |||||||||||| | | || Sbjct 301 ATCAATGTCTTGAGCGC-CAAGAAATCCGAACTGGCTGAGGTTTCGTCTTTGTATACTCA 359 Query 493 TATGGTGAGTTTGACTCCTAAATCAGAAGGATATAGAGTGGTTTTTGAAGAGAAGAAGAG 552 |||| ||||||| |||| |||| |||||||||||| ||||| ||||||||||||||| Sbjct 360 AATGGAGAGTTTGGTTCCTCAATCTGAAGGATATAGAATGGTTATTGAAGAGAAGAAGAA 419 Query 553 GGAATTTGATACTCTACAAGAAGCTCTACGGAATCTCCGGTGCTCTACTAGTGATCAACT 612 ||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 420 GGAGTTTGATACTCTACTTGAAGCTCTACGGAATCTCCGGTGCACTACTAGTGATCAACT 479 Query 613 TTGTTTTTCAAAGGAGGAACTCGATCATCTTATG-TATATAGCTCATTATCAGATTGAAC 671 ||||||| ||||||||||||| |||||||||| | ||||||||||| |||||||||||| Sbjct 480 TTGTTTTACAAAGGAGGAACTTGATCATCTTA-GTTATATAGCTCAGTATCAGATTGAAT 538 Query 672 ATGGTAGCATTGGTTTGGAGGAAGAAGATTGGGTGCTTAAAGAGACCGAGAAGCCTGATG 731 |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| Sbjct 539 ATGGTAGCATTGGTTTGGAGGAAGAAGATTGGATGCTTAAGGAGACTGAGAAGCCTGATG 598 Query 732 GGAT-AGTTCTAAGTGAGGATTCTCTTGCGGAGAAAGAAGCTTCCATAAACCGTGTTAAG 790 |||| | |||| | | | | |||||||||||||||||||| ||||| ||| Sbjct 599 GGATCA-TTCT-A---A-G-------T---GAGAAAGAAGCTTCCATAAATCGTGTCAAG 642 Query 791 TCTAAGGCCGTGGAATTGTATCAAGTAAAGAAGGAGCTCGATGCGATTACATGGAAGATA 850 |||| ||| |||||||| || |||||||||| ||||| ||||||||||| ||||||||| Sbjct 643 TCTATGGCTTTGGAATTGAATGAAGTAAAGAATGAGCTTGATGCGATTACTTGGAAGATA 702 Query 851 AAC--CTCTTGGCTGAAAAAATGGGGAAGAGTCGGAACAAGATCAAGATTTTGGATGTAG 908 ||| | || | ||| ||| || ||||||||| ||||| || | | |||||||| | | Sbjct 703 AACGAC-CTAAG-TGACAAATTGTGGAAGAGTCAAAACAACATTAGGGTTTTGGATTTGG 760 Query 909 AACTGGCACACATACTTGAGAAGAGGGACAGATCCTATGAAAGGATTAGGATGTTGAGGA 968 || |||||||||||||||||||||||| |||| |||| |||||||| ||||||||||| Sbjct 761 AAAAGGCACACATACTTGAGAAGAGGGATAGATTTTATGCAAGGATTAAGATGTTGAGGA 820 Query 969 TACAACGAGACAAAGGGAAA-GATGCCTTTTTCGAGAGCCTTCCTGTTATGAGGAAAGCT 1027 |||||||||||||| ||||| | ||| |||||| |||||||| |||||||| | |||||| Sbjct 821 TACAACGAGACAAA-GGAAATGCTGCATTTTTCCAGAGCCTTTCTGTTATGTGTAAAGCT 879 Query 1028 AAAGAATTGGCTGCTTCTGGAAATGTTCGAGATCTTGAAGTGTTTGCCAACTCTGAGGTT 1087 ||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||| Sbjct 880 AAAGAATTGGCTGCTTCTGGAAATGTTAGAGAGCTTGAAGTGTTTGCTAGCTCTGAGGTT 939 Query 1088 GAAAGATTCATGACTCATTGGAATGATGACAAGGCTTTTAGGGATGATTACGTAAAAAGA 1147 || ||||||||||||| |||||||||||| |||||||||||||| |||||||||| |||| Sbjct 940 GATAGATTCATGACTCTTTGGAATGATGATAAGGCTTTTAGGGAAGATTACGTAAGAAGA 999 Query 1148 ATCTCGCTTTCACTTTGTGAAAGACAGCTGAACCAAGATGGCCGGATTAAAGATCCTGAA 1207 ||||||| |||||| ||||||||| | |||||| ||||||||||||| |||||| |||| Sbjct 1000 ATCTCGCATTCACTATGTGAAAGAGAACTGAACGAAGATGGCCGGATAAAAGATGCTGAC 1059 Query 1208 GTTCAGGTTGTTGGGGAAAAGCAAGTACCGGTTAAGACTATGAAGGGAGGCGAGAAGGTT 1267 ||||| || || |||||||| |||| |||||||||||||| ||| || ||||||||||| Sbjct 1060 CTTCAGATTTTTTGGGAAAAGAAAGTGCCGGTTAAGACTATAAAGCGAAGCGAGAAGGTT 1119 Query 1268 CACAAGACGAATAGAGAAGATCCCAGCTCCAACTTGTT-TCAAGATGGAAGTGTAATTAT 1326 || |||| ||||||||||||| | ||||| |||| || | ||||||||| |||||||| Sbjct 1120 CATAAGATGAATAGAGAAGATTCAAGCTCTAACTC-TTCTGAAGATGGAAATGTAATTAC 1178 Query 1327 AGATAAAC 1334 |||||||| Sbjct 1179 AGATAAAC 1186 Score = 361 bits (195), Expect = 2e-98 Identities = 281/320 (88%), Gaps = 15/320 (5%) Strand=Plus/Plus Query 1593 TCAAGGAGTGTGAGAAAAAGGCGAAGAAGAAA---GCTGCAAATTCTTCTTCTCCTTCAG 1649 |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 1424 TCAATGAGTGTGAGAAAAAGGCGAAGAAGAAAGCTGCTGCAAATTCTACTTCTCCTTCAG 1483 Query 1650 AATCAGACCAATCACAAGAAGTTATCAATGAGCTGGAAAAGGGTAGGACTTTAGCTGTTT 1709 ||||||||||| | | |||||||| || |||||| |||||| ||||| |||| Sbjct 1484 AATCAGACCAA------GTA---ATCAATGA--TG-AAAAGGTTAGGACATTAGCAGTTT 1531 Query 1710 CAGTGAAAGAGAAACCCCAAAAGGAGAGATCATTGTTTCCAAAGCAGAGAAGTTTCAGGT 1769 ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| Sbjct 1532 CAGGGAAAGAGAAACACCAAAAGGAGAGATTGTTGTTTCCAAAGCAGAGAAGTTTTAGGT 1591 Query 1770 ACAAACACCGCGGAAGAGGAACCGAAGCTCTCCCTAAGGCAATCCTAAACCGTAGAAGGG 1829 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || Sbjct 1592 ACAAACACCGCGGAAGCGGAACCGAAGCTCTCCCTAAGGCCATCCTAAACCGTAGAAAGG 1651 Query 1830 CTCAAAAATATTGGGTTTGGGGACTTTCATCTGCTGCACTTGCTGTCGCACTCTTCCTTG 1889 ||| ||||||||||||||||||||| |||||||||||||| ||| | ||| |||||| Sbjct 1652 CTCGTCGATATTGGGTTTGGGGACTTTCTTCTGCTGCACTTGCGGTCTCGCTCGTCCTTG 1711 Query 1890 TGGTTTTACTTCTACGGTAA 1909 |||||||||||||| ||||| Sbjct 1712 TGGTTTTACTTCTAAGGTAA 1731 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 110441199000 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5