BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479029
Length=2782
Score E
Sequences producing significant alignments: (Bits) Value
AT3G15730.1 | Symbols: PLDALPHA1, PLD | phospholipase D alpha 1... 4466 0.0
AT1G52570.1 | Symbols: PLDALPHA2 | phospholipase D alpha 2 | ch... 2067 0.0
> AT3G15730.1 | Symbols: PLDALPHA1, PLD | phospholipase D alpha
1 | chr3:5330322-5333745 FORWARD LENGTH=2810
Length=2810
Score = 4466 bits (2418), Expect = 0.0
Identities = 2669/2790 (96%), Gaps = 17/2790 (1%)
Strand=Plus/Plus
Query 1 CACGGACCAGATCCCGAATTCTTCATCTGACCACCGACCGATTGAGTTTCTCCGATCAGA 60
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 14 CACGGACCAGATCCCGAATTCTTCTTCTGACCACCGAACGATTGAGTTTCTCCGATCAGA 73
Query 61 TCTCAGTTTCTGGGGAA-AATTTGAAGTGAACAAATGGCGCAGCATCTGTTGCACGGGAC 119
||||||||||| ||||| |||| |||||||| ||||||||||||||||||||||||||||
Sbjct 74 TCTCAGTTTCT-GGGAATAATTCGAAGTGAAAAAATGGCGCAGCATCTGTTGCACGGGAC 132
Query 120 TTTACATGCGACAATCTATGAAGTTGATGCCCTCCATGGTGGTGGAGTCAGGCAAGGCTT 179
||||||||| || |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 133 TTTACATGCTACCATCTATGAAGTTGATGCCCTCCATGGTGGTGGTGTTAGGCAAGGCTT 192
Query 180 CCTTGGCAAGATTCTGGCAAATGTAGAAGAGACGATTGGTGTTGGCAAAGGAGAAACGCA 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 193 CCTTGGCAAGATTCTGGCAAATGTAGAAGAGACGATTGGTGTTGGTAAAGGAGAAACACA 252
Query 240 GTTGTATGCGACGATTGATCTGCAAAAAGCTAGAGTTGGGAGAACCAGGAAGATCAAAAA 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 253 GTTGTATGCGACGATTGATCTGCAAAAAGCTAGAGTTGGGAGAACCAGGAAGATCAAAAA 312
Query 300 TGAACCTACGAACCCAAAGTGGTATGAATCGTTTCATATTTACTGTGCCCACTTGGCTTC 359
|||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 313 TGAACCTAAGAACCCAAAGTGGTATGAGTCGTTTCATATTTACTGTGCTCACTTGGCTTC 372
Query 360 TGATATCATCTTCACTGTTAAAGATGATAATCCCATTGGGGCCACCCTTATCGGAAGAGC 419
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 373 TGATATCATCTTCACTGTTAAAGATGATAATCCCATTGGAGCTACCCTTATCGGAAGAGC 432
Query 420 ATACATTCCTGTTGA-CGAAGTCGTTAATGGCGAGGAAGTGGATCGGTGGGTTGAGATCT 478
|||||||||||||| | ||||| |||| |||||||||||||||| ||||||||||||||
Sbjct 433 TTACATTCCTGTTGATC-AAGTCATTAACGGCGAGGAAGTGGATCAGTGGGTTGAGATCT 491
Query 479 TGGATAATGACAGAAACCCCATCCAGGGAGGATCAAAGATTCATGTCAAGCTCCAATATT 538
||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||
Sbjct 492 TGGATAATGACAGAAACCCTATTCAGGGAGGATCAAAGATTCATGTCAAGCTTCAATATT 551
Query 539 TCCATGTTGAGGAGGATCGTAACTGGAATAAGGGTATCAAAAGTGCTAAATTCCCTGGAG 598
|||||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||
Sbjct 552 TCCATGTTGAGGAGGATCGTAACTGGAACATGGGTATCAAAAGTGCCAAGTTCCCTGGAG 611
Query 599 TTCCATACACGTTCTTCTCGCAGAGACAAGGCTGCAAGGTTTCTCTGTACCAAGATGCTC 658
| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 612 TGCCATACACATTCTTCTCGCAGAGACAAGGCTGCAAAGTTTCTCTGTACCAAGATGCTC 671
Query 659 ATATTCCAGACAACTTTGTCCCTAGAATTCCTCTCGCTGGAGGGAAGAACTATGAGCCTC 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 672 ATATTCCAGACAACTTTGTCCCTAGAATTCCTCTCGCTGGAGGGAAGAACTATGAGCCTC 731
Query 719 AAAGATGTTGGGAGGATATTTTCGATGCCATTAGCAACGCAAAACACTTGATCTACATTA 778
|||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct 732 AAAGATGTTGGGAGGATATTTTTGATGCTATTAGCAATGCAAAACACTTGATCTACATTA 791
Query 779 CGGGTTGGTCTGTTTACGTTGAGATTGCCTTAGTGAGAGACTCGAGGAGGCCTAAGCCAG 838
| |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| |
Sbjct 792 CTGGTTGGTCTGTTTACGCTGAGATTGCTTTAGTGAGGGACTCGAGGAGGCCTAAGCCTG 851
Query 839 GAGGAGATGTGACCATTGGTGAGCTTCTCAAGAAGAAGGCTAGTGAAGGTGTTAGGGTTC 898
|||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 852 GAGGTGATGTGACCATTGGTGAGCTACTCAAGAAGAAGGCTAGTGAAGGTGTCAGGGTTC 911
Query 899 TTTTACTTGTTTGGGATGACAGAACCTCTGTTGATGTCCTGAAGAAAGATGGGCTCATGG 958
|||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 912 TTTTGCTTGTTTGGGATGACAGAACTTCTGTTGATGTGCTGAAGAAAGATGGGCTCATGG 971
Query 959 CTACTCATGATGAAGAAACCGAGAACTTT-TTCAGGGGAAGTGATGTCCATTGTATTCTG 1017
|||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 972 CTACTCATGATGAAGAGACCGAGAA-TTTCTTCAGGGGAAGTGATGTCCATTGTATTCTG 1030
Query 1018 TGTCCTCGTAACCCGGATGATGGTGGTAGCATAGTCCAAAGCTTGCAGGTCTCTACTATG 1077
|| ||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||
Sbjct 1031 TGCCCTCGTAACCCGGATGACGGTGGTAGCATAGTCCAAAGTTTGCAGATCTCTACTATG 1090
Query 1078 TTCACGCACCATCAGAAAATCGTTGTTGTGGACAGTGAGATGCCAAACAGAGGAGGATCA 1137
|||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 1091 TTCACGCATCATCAGAAAATCGTTGTTGTGGACAGCGAGATGCCAAGCAGAGGAGGATCA 1150
Query 1138 GAAATGAGGAGAATTGTGAGCTTTGTTGGCGGTATTGATCTCTGTGATGGAAGATACGAC 1197
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1151 GAAATGAGGAGAATTGTGAGTTTTGTTGGCGGTATTGATCTTTGTGATGGAAGATACGAC 1210
Query 1198 ACTCCGTTCCACTCCTTGTTCAGGACATTGGACACAGTCCACCATGATGACTTCCATCAA 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1211 ACTCCGTTCCACTCCTTGTTCAGGACATTGGACACAGTCCACCATGATGACTTCCATCAA 1270
Query 1258 CCTAACTTCACTGGTGCTGCTATCACTAAAGGTGGTCCAAGGGAGCCTTGGCATGACATC 1317
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 CCTAACTTCACTGGTGCTGCTATCACTAAAGGTGGTCCAAGGGAGCCTTGGCATGACATT 1330
Query 1318 CACTCCCGTCTTGAAGGTCCAATTGCCTGGGATGTCATGTATAATTTCGAGCAGAGATGG 1377
|||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct 1331 CACTCCCGTCTTGAAGGTCCAATTGCTTGGGATGTCATGTACAACTTCGAGCAGAGATGG 1390
Query 1378 AGCAAGCAGGGTGGTAAAGACATTCTGGTTAAGTTGAGAGATCTTGGTGATATTATTATC 1437
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1391 AGCAAGCAGGGTGGTAAAGACATTCTGGTTAAGTTGAGAGATCTTAGTGATATTATTATC 1450
Query 1438 ACCCCTTCTCCTGTTATGTTCCAAGAGGACCATGATGTGTGGAATGTCCAATTGTTTAGA 1497
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1451 ACCCCTTCTCCTGTTATGTTCCAAGAGGACCACGATGTGTGGAATGTCCAATTGTTTAGG 1510
Query 1498 TCCATTGATGGTGGAGCTGCTGCTGGGTTTCCCGAGTCGCCTGAAGCTGCTGCTGAAGCC 1557
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1511 TCCATTGATGGAGGAGCTGCTGCTGGGTTTCCCGAGTCGCCTGAAGCTGCTGCGGAAGCC 1570
Query 1558 GGGCTTGTAAGTGGGAAAGATAACATCATTGATAGGAGTATCCAAGATGCTTACATTCAC 1617
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1571 GGGCTTGTAAGTGGGAAAGATAACATCATTGATAGGAGTATCCAAGATGCTTACATTCAT 1630
Query 1618 GCAATCAGACGGGCCAAGGATTTCATCTACGTTGAAAACCAGTACTTCCTTGGGAGTTCT 1677
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1631 GCAATCAGACGTGCTAAGGATTTCATCTACGTTGAAAACCAGTACTTCCTTGGGAGTTCT 1690
Query 1678 TTTGCTTGGGCCGCCGATGGTATTACTCCTGAGGACATCAATGCCCTGCACTTAATCCCA 1737
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1691 TTTGCTTGGGCAGCCGATGGTATTACTCCTGAGGACATCAATGCCCTGCACTTAATCCCA 1750
Query 1738 AAAGAGTTATCGCTGAAGATAGTTAGCAAGATCGAGAAAGGAGAGAAGTTCAGGGTGTAT 1797
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1751 AAAGAGTTGTCGCTGAAGATAGTTAGCAAGATTGAGAAAGGAGAGAAGTTCAGGGTCTAT 1810
Query 1798 GTTGTGGTCCCAATGTGGCCAGAAGGTCTCCCAGAGAGTGGATCAGTGCAAGCTATATTA 1857
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1811 GTTGTGGTTCCAATGTGGCCAGAAGGTCTCCCAGAGAGTGGATCAGTGCAAGCTATATTA 1870
Query 1858 GATTGGCAGAGGAGGACCATGGAGATGATGTACAAGGATGTGATTCAGGCTCTCAGGGCG 1917
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1871 GACTGGCAGAGGAGGACCATGGAGATGATGTACAAGGATGTGATTCAGGCTCTCAGGGCC 1930
Query 1918 CAGGGTCTTGAGGAAGATCCAAGAAACTATCTGACATTCTTCTGTCTTGGAAACCGTGAG 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1931 CAGGGTCTTGAGGAAGATCCAAGAAACTATCTGACATTCTTCTGTCTTGGAAACCGTGAG 1990
Query 1978 GTCAAGAAAGATGGAGAATATGAGCCTGCTGAGAAACCAGACCCCGACACAAATTATATG 2037
||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct 1991 GTCAAGAAAGATGGAGAGTATGAGCCTGCTGAGAAACCAGACCCCGACACTGATTACATG 2050
Query 2038 AGGGCGCAAGAAGCCCGCCGCTTCATGATTTACGTCCACACCAAAATGATGATCGTTGAC 2097
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2051 AGGGCGCAAGAAGCACGCCGTTTCATGATTTACGTCCACACCAAAATGATGATCGTTGAC 2110
Query 2098 GATGAGTATATTATTATCGGGTCTGCTAACATCAACCAGAGGTCAATGGACGGTGCAAGA 2157
||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2111 GATGAATACATTATCATTGGGTCTGCTAACATCAACCAGAGGTCAATGGACGGTGCAAGA 2170
Query 2158 GACTCTGAGATAGCAATGGGAGGTTATCAACCACATCACCTGTCCTATAGACAACCAGCT 2217
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 2171 GACTCTGAGATAGCAATGGGAGGTTATCAACCACATCACTTGTCCCATAGACAACCAGCT 2230
Query 2218 CGTGGCCAGATCCATGGGTTCCGTATGTCACTCTGGTACGAACACCTGGGAATGCTAGAT 2277
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 2231 CGTGGCCAGATCCATGGGTTTCGTATGTCACTCTGGTACGAACACCTGGGAATGCTCGAT 2290
Query 2278 GAAACCTTCCTCGATCCCTCAAGCTTGGAATGCATTGAGAAAGTTAACCGCATTTCTGAC 2337
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2291 GAAACCTTCCTCGATCCATCAAGCTTGGAATGCATTGAGAAAGTTAACCGCATTTCTGAC 2350
Query 2338 AAGTATTGGGACTTTTACTCAAGTGAGTCACTTGAACATGACCTTCCCGGTCACTTGCTC 2397
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 2351 AAGTATTGGGACTTTTACTCAAGTGAGTCACTCGAACATGACCTTCCTGGTCACTTGCTC 2410
Query 2398 CGCTACCCGATTGGTGTAGCTAGCGAAGGCGACATCACTGAGCTTCCAGGATTTGAATTC 2457
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2411 CGCTACCCGATCGGTGTAGCCAGCGAAGGCGACATCACTGAGCTTCCAGGATTTGAATTC 2470
Query 2458 TTCCCGGACACAAAGGCCCGTATCCTCGGCACCAAATCAGACTACCTGCCTCCAATCCTT 2517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2471 TTCCCGGACACAAAGGCCCGTATCCTCGGCACCAAATCAGACTACCTGCCTCCAATCCTT 2530
Query 2518 ACAACCTAACCTCACTGCGCATGTTGAGTAATGAtctctctctctcgctctctctGCTTT 2577
||||||||| |||||| |||||| |||||||||||||||||| | |||||| |||||
Sbjct 2531 ACAACCTAATCTCACTAAGCATGTCAAGTAATGATCTCTCTCTC-C-CTCTCT--GCTTT 2586
Query 2578 GCTGCTGTTGTAGCTTTGAATAAA-CTCGAGTGTCTACCTGTAGAATTAATAAGTTAA-T 2635
|||||||||||||||||||||||| || |||||||||||| ||||||||| |||| || |
Sbjct 2587 GCTGCTGTTGTAGCTTTGAATAAAACTTGAGTGTCTACCTTTAGAATTAAGAAGTCAAAT 2646
Query 2636 GGTTGGTGTGATGATGCAACT-CTTTTACCCCTT-GGTTTT-ATATTCGTACAATGACGT 2692
||||| | |||||||||| || |||| ||||||| |||||| ||||||||||||||||||
Sbjct 2647 GGTTGTTATGATGATGCA-CTTCTTT-ACCCCTTTGGTTTTTATATTCGTACAATGACGT 2704
Query 2693 GGTGAGAGAATGTAGCTTTGTGATCTTCTTTTGTTGTTGTTATGTACCTTTGAACTTATG 2752
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 2705 GGTGAGAGAATGTAGCTTTGTGATCTTGTTTTGTTGTTGTTATGTACCTTTGGACTTATG 2764
Query 2753 AATCTTATATCTGATCCTTTTCTTTTTATT 2782
||||||||||||||||||||||||||||||
Sbjct 2765 AATCTTATATCTGATCCTTTTCTTTTTATT 2794
> AT1G52570.1 | Symbols: PLDALPHA2 | phospholipase D alpha 2 |
chr1:19583940-19587050 REVERSE LENGTH=2470
Length=2470
Score = 2067 bits (1119), Expect = 0.0
Identities = 2006/2433 (82%), Gaps = 66/2433 (3%)
Strand=Plus/Plus
Query 127 GCGACAATCTATGAAGTTGATGC-CCTCCATGGTGGTGGA-GTCAG-GCAAGGCTTCCTT 183
||||||||||| ||||||||| | ||||||| || ||| || || | ||| || |||
Sbjct 71 GCGACAATCTACGAAGTTGAT-CATCTCCATGCTGAAGGAGGT-AGATC-AGG-TTTCTT 126
Query 184 -GGCA-AGATTCTGGCAAATGTAGAAGAGACGATTGGTGTTGGCAAAGGAGAAACGCAG- 240
|| | ||| || |||||||||||||| || || |||||||||||||||||||| |||
Sbjct 127 AGG-ATCGATACTAGCAAATGTAGAAGAAACAATCGGTGTTGGCAAAGGAGAAACTCAGC 185
Query 241 TTGTATGCGACGATTGATC-TGCAAAAAGCTAGAGTTGGGAGAACCAGGAAGATCAA-AA 298
|| || || || || |||| || | ||||| |||||||| ||||| ||||| || || ||
Sbjct 186 TT-TACGCTACAATCGATCTTG-AGAAAGCAAGAGTTGGAAGAACGAGGAAAAT-AACAA 242
Query 299 ATGAACCTACGAACCCAAAGTGGTATGAATCGTTTCATATTTACTGTGCCCACTTGGCTT 358
| || || | ||||||||||||| ||| || |||||||||||||||| ||| |||||
Sbjct 243 AGGAGCCAAAAAACCCAAAGTGGTTTGAGTCTTTTCATATTTACTGTGGTCACATGGCTA 302
Query 359 CTGATATCATCTTCACTGTTAAAGATGATAATCCCATTGGGGCCACCCTT-ATCGGAAGA 417
|| | || ||||||||||| |||| |||||| ||||| || | | || |||||||||
Sbjct 303 AACATGTTATTTTCACTGTTAAGGATGCTAATCCGATTGGCGCGA-CGTTGATCGGAAGA 361
Query 418 GCATACATTCCTGTTGACGA-AGTCGTT-AATGGCGAGGAAGTGGATCGGTGGGTTGAGA 475
| || |||||||| || || | | || |||| || ||||| ||| | |||||||| |
Sbjct 362 GGTTATATTCCTGTGGAAGATA-T-TTTGCATGGAGAAGAAGTTGATAGATGGGTTGATA 419
Query 476 TCTTGGATAATGACAGAAACCCCA-TCCAGGGAGGATCAAAGATTCATGTCAAGCTCCAA 534
|||| |||||||| | |||||| | | | |||||||||||||| ||||| || ||||||
Sbjct 420 TCTTAGATAATGAGAAAAACCCAATTGC-TGGAGGATCAAAGATCCATGTGAAACTCCAA 478
Query 535 TATTTCCATGTTGAGGAGGATCGTAACTGGAATAAG-GGTATCAAAAGTGCTAAATTCCC 593
|||||| |||||| ||||| ||||||||| | ||||||||||||||||| || ||
Sbjct 479 TATTTCGGTGTTGAAAAGGATAAAAACTGGAAT-CGTGGTATCAAAAGTGCTAAGTTTCC 537
Query 594 TGGAGTTCCATACACGTTCTTCTCGCAGA-GACAAGGCTGCAAGGTTTCTCTGTACCAAG 652
|||||||| ||||| |||||||| |||| || ||||||||| |||||| |||| ||||
Sbjct 538 AGGAGTTCCTTACACATTCTTCTCTCAGAGGA-GAGGCTGCAAAGTTTCTTTGTATCAAG 596
Query 653 ATGCTCATATTCC-AGACAACTTTGTCCCTAGAATTCCTCTCGCTGGAGGGAAGAACTAT 711
|||||||||| || || ||||||||||| | ||| ||||| || |||||||| |||||
Sbjct 597 ATGCTCATATCCCTGGA-AACTTTGTCCCGAAAATCCCTCTTGCGGGAGGGAAAAACTAC 655
Query 712 GAGCCTCAAAGATGTTGGGAGGATATTTTCGATGCCATTAGC-AACGCAAAACACTTGAT 770
||||| || ||||||||||||||||||||||||| |||| | || || |||||||||||
Sbjct 656 GAGCCACATCGATGTTGGGAGGATATTTTCGATGCAATTA-CTAATGCTAAACACTTGAT 714
Query 771 CTACATTACGGGTTGGTCTGTTTACGTTGAGATTGCCTTAGTGAGAGACTCGAGGAGGCC 830
|||||||| ||||||||||||||| ||||||| | |||||||| ||||||||||||||
Sbjct 715 TTACATTACTGGTTGGTCTGTTTACACTGAGATTTCTTTAGTGAGGGACTCGAGGAGGCC 774
Query 831 TAAGCCAGGAGGAGATGTGACCATTGGTGAGCTTCTCAAGAAGAAGGCTAGTGAAGGTGT 890
|| | ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct 775 AAAACAAGGAGGAGATGTGACTGTTGGTGAGCTACTCAAGAAGAAAGCTAGTGAAGGTGT 834
Query 891 TAGGGTTCTTTTACTTGTTTGGGATGACAGAACCTCTGTTGATGTCCTGAAGAAAGATGG 950
|| |||| |||| |||||||||||||||||||| || |||||| | ||||| ||||||||
Sbjct 835 TAAGGTTATTTTGCTTGTTTGGGATGACAGAACATCAGTTGATTTGCTGAAAAAAGATGG 894
Query 951 GCTCATGGCTACTCATGATGAAGAAACCGAGAACTTTTTCAGGGGAAGTGATGTCCATTG 1010
|| ||||||||||||||||| ||||| ||||| |||||||| |||| || || | ||
Sbjct 895 ACTTATGGCTACTCATGATGAGGAAACTGAGAATTTTTTCAGAGGAACCGACGTGAACTG 954
Query 1011 TATTCTGTGTCCTCGTAACCCGGATGATGGTGGTAGCATAGTCCAAAGCTTGCAGGTCTC 1070
|||| |||||||||||||||| ||||||||||| ||||| ||||||| |||||| ||||
Sbjct 955 TATTTTGTGTCCTCGTAACCCTGATGATGGTGGAAGCATTGTCCAAAACTTGCAAATCTC 1014
Query 1071 TACTATGTTCACGCACCATCAGAAA-ATCGTTGTTGTGGACAGTGAGATGCCAAACAGAG 1129
||||||||||| || || || ||| || |||||||| |||||||| ||||| || |
Sbjct 1015 AACTATGTTCACTCATCACCA-AAAGATTGTTGTTGTAGACAGTGAAATGCC---GAGTG 1070
Query 1130 GAGGATCAGAAAT-GAGGAGAATTGTGAGCTTTGTTGGCGGTATTGATCTCTGTGATGGA 1188
|||||||| | || || ||||| ||||| |||||||| ||| ||||||| |||||||||
Sbjct 1071 GAGGATCA-AGATCCAGAAGAATAGTGAGTTTTGTTGGTGGTCTTGATCTTTGTGATGGA 1129
Query 1189 AGATACGACACTCCGTTCCACTCCTTGTTCAGGACATTGGACACAGTCCACCATGATGAC 1248
||||| ||||||||||| ||||||||||| || || |||||||| | ||| || ||||||
Sbjct 1130 AGATATGACACTCCGTTTCACTCCTTGTTTAGAACGTTGGACACTGCCCATCACGATGAC 1189
Query 1249 TTCCATCAACCTAACTTCACTGGTGCTGCTATCACTAAAGGTGGTCCAAGGGAGCCTTGG 1308
||||||||||| || |||||||| ||||| || || ||||||||||| || ||||| |||
Sbjct 1190 TTCCATCAACCGAATTTCACTGGCGCTGCGATAACCAAAGGTGGTCCTAGAGAGCCATGG 1249
Query 1309 CATGACATCCACTCCCGTCTTGAAGGTCCAATTGCCTGGGATGTCATGTATAATTTCGAG 1368
||||| || || | ||||||||||| || ||||| ||||||||| |||||||||| |||
Sbjct 1250 CATGATATTCATTGTCGTCTTGAAGGACCTATTGCTTGGGATGTCTTGTATAATTTTGAG 1309
Query 1369 CAGAGATGGAGCAAG-CAGGGTGGTAAAGACATTCTGGTTAAGTTGAGAGATCTTGGTGA 1427
||||||||||| || || || |||||||| ||| ||||||| ||||||| || || ||
Sbjct 1310 CAGAGATGGAG-TAGACAAGGCGGTAAAGATATTTTGGTTAAAATGAGAGAACTCGGAGA 1368
Query 1428 TATTATTATCACC-CCTTCTCCTGTTATGTTC-CAAGAGGACCATGATGTGTGGAATGTC 1485
|||||| ||| || |||||||| ||| ||||| | |||||| ||||| |||||||||||
Sbjct 1369 TATTATCATC-CCGCCTTCTCCCGTTCTGTTCTC-AGAGGATCATGACGTGTGGAATGTT 1426
Query 1486 CAATTGTTTAGATCCATTGATGGTGGAGCTGCTGCTGGGTTTCCCGAGTCGCCTGAAGCT 1545
|| |||||||||||||||||||||||||| |||||||| ||||| || || |||||||||
Sbjct 1427 CAGTTGTTTAGATCCATTGATGGTGGAGCAGCTGCTGGATTTCCTGACTCCCCTGAAGCT 1486
Query 1546 GCTGCTGAAGCCGGGCTTGTAAGTGGGAAAGATAACATCATTGATAGGAGTATCCAAGAT 1605
|| || ||||| || ||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct 1487 GCAGCGGAAGCAGGTCTTGTGAGTGGAAAAGATAATATAATTGATAGGAGTATTCAAGAT 1546
Query 1606 GCTTACATTCACGCAATCAGACGGGCCAAGGATTTCATCTACGTTGAAAACCAGTACTTC 1665
|||||||||||||| || ||||| || || || |||||||| | |||||||||||||||
Sbjct 1547 GCTTACATTCACGCGATTAGACGAGCTAAAGACTTCATCTATATCGAAAACCAGTACTTC 1606
Query 1666 CTTGGGAGTTCTTTTGCTTGG-GCCGCCGATGGTATTACTCCTGAGGACATCAATGCCCT 1724
||||| || |||||||||||| || || ||||| || | || ||||| |||||||| ||
Sbjct 1607 CTTGGAAGCTCTTTTGCTTGGAGC-GCGGATGGAATCAAACCAGAGGAAATCAATGCTCT 1665
Query 1725 GCA-CTTAATCCCAAAAGAGTTATCGCTGAAGATAGTTAGCAAGATCGA-GAAAGGAGAG 1782
||| || | ||| || ||| |||| ||||||| |||||||| ||| | | | ||||||
Sbjct 1666 GCATCTGATTCCGAAG-GAGCTATCTTTGAAGATTGTTAGCAAAATCAAAGCA-GGAGAG 1723
Query 1783 AAGTTCAGGGTGTATGTTGTGGTCCCAATGTGGCCAGAAGGTCTCCCAGAGAGTGGATCA 1842
||||| | ||| |||||||| || ||||||||||| ||||| | || ||||||||||||
Sbjct 1724 AAGTTTAAGGTCTATGTTGTTGTTCCAATGTGGCCTGAAGGGATTCCTGAGAGTGGATCA 1783
Query 1843 GTGCAAGCTATATTAGATTGGCAGAGGAGGACCATGGAGATGATGTACAAGGATGTGATT 1902
|| |||||||||||||||||||||| || || ||||||||||||||||| ||||| ||
Sbjct 1784 GTCCAAGCTATATTAGATTGGCAGAAAAGAACAATGGAGATGATGTACAAAGATGTAAT- 1842
Query 1903 CA-GGCTCTCAGGGCGCAGGGTCTTGAGG-A-AG-ATCCAAGAAACTATCTGACATTCTT 1958
|| ||| || || | | || ||||||| | || |||| || | ||||||||||||||
Sbjct 1843 CAAGGCACTTAGAGAAAATGGACTTGAGGGAGAGGATCCGCGAGATTATCTGACATTCTT 1902
Query 1959 CTGTCTTGGAAACCGTGAGGTCAAGAAAGATGGAGAATATGAGCCTGCTGAGAAACCAGA 2018
||| || || ||||| |||||||||||||||||||| ||||||||| | |||||||| ||
Sbjct 1903 CTGCCTCGGTAACCGAGAGGTCAAGAAAGATGGAGAGTATGAGCCTTCAGAGAAACCTGA 1962
Query 2019 CCCCGACACAAATTATATGAGGGCGCAAGAAGCCCGCCGCTTCATGATTTACGTCCACAC 2078
|| ||||| | ||||| | || |||||||| |||||||||||||| || || |||||
Sbjct 1963 ACCGGACACTGACTATATCCGAGCACAAGAAGCACGCCGCTTCATGATCTATGTTCACAC 2022
Query 2079 CAAAATGATGATCGTTGACGATGAGTATATTATTATCGGGTCTGCTAACATCAACCAGAG 2138
||||||||||| |||||||||||||| ||||| ||||| || || || |||||||||||
Sbjct 2023 TAAAATGATGATAGTTGACGATGAGTACATTATAATCGGATCAGCAAATATCAACCAGAG 2082
Query 2139 GTCAATGGACGGTGCAAGAGACTCTGAGATAGCAATGGGAGGTTATCAACCACATCACCT 2198
||||||||| |||||||||||||| ||||||||||||||||| ||||||||| |||| ||
Sbjct 2083 GTCAATGGATGGTGCAAGAGACTCAGAGATAGCAATGGGAGGCTATCAACCATATCATCT 2142
Query 2199 GTCCTATA-GACAACCAGCTCGTGGCCAGATCCATGGGTTCCGTATGTCACTCTGGTACG 2257
|| | | ||||||||||||| || || |||||||| ||||| ||||| | ||||| |
Sbjct 2143 CTCA-ACAAGACAACCAGCTCGAGGTCAAATCCATGGATTCCGCATGTCTTTATGGTATG 2201
Query 2258 AACACCTGGGAATGCTAGATGAAACCTTCCTCGATCCCTCAAGCTTGGAATGCATTGAGA 2317
|||| | |||||||| |||||||| ||||||||||| || ||| ||||| || |||
Sbjct 2202 AACATTTAGGAATGCTCGATGAAACATTCCTCGATCCATCGAGCCAAGAATGTATCCAGA 2261
Query 2318 AAGTTAACCGCATTTCTGACAAGTATTGGGA-CTTTTACTCAAGTGAGTCACTTGAACAT 2376
|||| ||||| || |||| ||||||||||| |||| |||||||||||||||||||||||
Sbjct 2262 AAGTCAACCGTGTTGCTGATAAGTATTGGGATCTTT-ACTCAAGTGAGTCACTTGAACAT 2320
Query 2377 GACCTTCCCGGTCA-CTTGCTCCGCTACCCGATTGGTGTAGCTAGCGAAGGCGA-CATCA 2434
|| ||||| ||||| || || ||||||||||| ||| | ||||| ||||| || |||||
Sbjct 2321 GATCTTCCTGGTCATCTA-CTTCGCTACCCGATCGGTATTGCTAGTGAAGG-GAACATCA 2378
Query 2435 CTGAGCTTCCAGGATTTGAATTCTT-CCCGGACACAAAGGCCCGTATCCTCGGCACCAAA 2493
|||||||||| |||| ||||||||| |||| ||||||| || ||||||||||| ||||
Sbjct 2379 CTGAGCTTCCCGGATGTGAATTCTTTCCCG-ACACAAAAGCTCGTATCCTCGGTGTCAAA 2437
Query 2494 TCAGACTACCTGCCTCCAATCCTTACAACCTAA 2526
|| || ||| |||||||||| ||||||||||||
Sbjct 2438 TCTGATTACATGCCTCCAATTCTTACAACCTAA 2470
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 138209927965
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5