BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479059
Length=2304
Score E
Sequences producing significant alignments: (Bits) Value
AT3G16030.1 | Symbols: CES101 | lectin protein kinase family pr... 1482 0.0
AT1G67520.1 | Symbols: | lectin protein kinase family protein ... 830 0.0
> AT3G16030.1 | Symbols: CES101 | lectin protein kinase family
protein | chr3:5439609-5442802 FORWARD LENGTH=2553
Length=2553
Score = 1482 bits (802), Expect = 0.0
Identities = 918/975 (94%), Gaps = 4/975 (0%)
Strand=Plus/Plus
Query 1332 CTCTGATGCAAACAAGCTCGGTGAAGGAGGTTTTGGTCCTGTATATAAGGGGAGTTTAAT 1391
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1581 CTCTGATGCAAACAAGCTCGGTGAAGGAGGTTTTGGTCCTGTATATAAGGGGAGGCTAAT 1640
Query 1392 AGATGGGGAGGAAGTGGCTATCAAAAGACTATCATTAGCATCCGGGCAAGGATTAGTGGA 1451
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1641 AGATGGGGAGGAAGTGGCTATCAAAAGGCTATCATTAGCATCCGGGCAAGGATTAGTGGA 1700
Query 1452 GTTCAAGAACGAAGCTATGCTTATTGCAAAACTTCAGCACACAAATCTTGTTC-AGTTGC 1510
|||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct 1701 GTTCAAGAACGAAGCTATGCTTATTGCAAAACTTCAACACACAAATCTTG-TCAAGTTGC 1759
Query 1511 TAGGATGCTGCATAGAGAAGGACGAGAAAATGTTGATTTACGAATACATGCCCAACAAGA 1570
||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1760 TAGGATGCTGCGTCGAGAAGGATGAGAAAATGTTGATTTACGAATACATGCCCAACAAGA 1819
Query 1571 GCCTTGACTACTTCCTCTTTGATCCCTTGAGGAAAAACGTTTTGGATTGGACA-CTGCGG 1629
|||||||||||||||||||||||||||||||||||| ||| ||||||||| | ||||||
Sbjct 1820 GCCTTGACTACTTCCTCTTTGATCCCTTGAGGAAAATTGTTCTGGATTGGA-AGCTGCGG 1878
Query 1630 TTCAGGATCATGGAAGGGATAATTCAAGGGCTTTTGTACCTTCACAAGTACTCGAGATTG 1689
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1879 TTTAGGATCATGGAAGGGATAATTCAAGGGCTTTTGTACCTTCATAAGTACTCGAGATTG 1938
Query 1690 AAAGTGATACACAGAGACATCAAAGCCAGCAACATTTTACTGGACGAGGATATGAATCCC 1749
||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||
Sbjct 1939 AAAGTAATACACAGAGACATCAAAGCCGGCAACATTTTGCTGGACGAGGATATGAACCCC 1998
Query 1750 AAAATATCCGATTTTGGAATGGCTCGGATATTTGGAGCGCAAGAATCCAGAGCTAACACC 1809
|||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |||||
Sbjct 1999 AAAATATCTGATTTTGGAATGGCTCGGATATTTGGAGCCCAAGAATCCAAAGCCAACACG 2058
Query 1810 AAAAGAGTTGCTGGCACATTTGGATATATGTCCCCGGAGTACTTCAGAGAAGGATTGTTC 1869
||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| |||
Sbjct 2059 AAAAGAGTTGCTGGCACATTTGGCTATATGTCTCCAGAGTACTTCAGAGAGGGATTATTC 2118
Query 1870 TCGGCGAAATCAGATGTATTTAGCTTCGGAGTTCTAATGTTGGAAATCATTTGTGGAAGG 1929
||||||||||||||||| || |||||||| ||||||||| | ||||||||||||||||||
Sbjct 2119 TCGGCGAAATCAGATGTGTTCAGCTTCGGGGTTCTAATGCTCGAAATCATTTGTGGAAGG 2178
Query 1930 AAGAACAATAGCTTCCACCATGACTCAGAAGGACCTCTGAATCTCATAGTTCATGTGTGG 1989
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2179 AAAAACAATAGCTTCCACCATGACTCAGAAGGACCTCTGAATCTCATAGTCCATGTGTGG 2238
Query 1990 AGTCTGTTTAAAGAGAACCGAGTTCACGAGGTGATAGATCCGTCTTTGGGAGATTCTGCA 2049
| ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||
Sbjct 2239 AATCTGTTTAAAGAGAACCGAGTTCGCGAGGTGATTGATCCATCTTTGGGAGATTCTGCA 2298
Query 2050 GTTGAGAACCCTCAAGTGTTGAGATGTGTTCAAGTTGCTCTGTTATGTGTACAACAAAAC 2109
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 2299 GTTGAGAACCCTCAAGTGTTGAGATGCGTTCAAGTTGCTCTGTTGTGTGTACAACAAAAC 2358
Query 2110 GCAGAAGATAGACCAAGTATGTTAGAAGTTGTGTCGATGATATACGGCGACGGCAACAAC 2169
||||| |||||||||||||||||||| |||||||| ||||||||||| || || ||||||
Sbjct 2359 GCAGACGATAGACCAAGTATGTTAGACGTTGTGTCCATGATATACGGTGATGGAAACAAC 2418
Query 2170 GCTCTTTCTTTGCCTAACGAGCCAGCTTTCTATGATGGTCCTCGGAGAAGCTCGCCGGAG 2229
||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||
Sbjct 2419 GCTCTTTCTTTGCCTAAAGAGCCAGCTTTCTATGATGGTCCCCCGAGAAGCTCGCCGGAG 2478
Query 2230 ATGGAGGTTGAACCACCTGAGCTGGAAAATGTATCGGCAAATAGAGTTACCATCACAGTG 2289
||||| ||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 2479 ATGGAAGTTGAGCCACCGGAGATGGAAAATGTATCGGCAAATAGAGTTACAATCACAGTG 2538
Query 2290 ATGGAAGCAAGATGA 2304
|||||||||||||||
Sbjct 2539 ATGGAAGCAAGATGA 2553
Score = 797 bits (431), Expect = 0.0
Identities = 537/588 (91%), Gaps = 8/588 (1%)
Strand=Plus/Plus
Query 247 GCTGTTTGGATTGCTAACCGTAACAATCCAATTTTGGGTCGCTCTGGAAGCCTCACAGTG 306
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 217 GCTGTTTGGATTGCTAACCGTAACAATCCAGTTTTGGGACGCTCTGGAAGCCTCACAGTG 276
Query 307 GACTCTCTTGGCCGATTGAGGATTTTAAGAGGAGCATCAAGCCTGCTTGAGCTAAGCCCT 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 277 GACTCTCTTGGCCGATTGAGGATTTTAAGAGGAGCATCAAGCCTGCTTGAGCTAAGCTCT 336
Query 367 ACGGAAACCACAGGAAACACAACCCTTAAGCTGTTGGATTCTGGAAATCTTCAGCTCCAA 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 337 ACGGAAACCACAGGAAACACAACCCTTAAGCTGTTGGATTCTGGAAATCTTCAGCTCCAA 396
Query 427 GAGATGGATTCTGATGGATCGATGAGGCAGAT-TCTGTGGCAAAGTTTTGATTATCCAAC 485
||||||||||||||||||||||||| || || | |||||||||||||||||||||||||
Sbjct 397 GAGATGGATTCTGATGGATCGATGAAGCGGACGT-TGTGGCAAAGTTTTGATTATCCAAC 455
Query 486 GGATACCCTTCTTCCTGGTATGAAACTTGGTTTCAATGTTAAGAATGGGAAGAGATGGGA 545
||||| |||||||| || |||||||| ||||||||||| |||| || |||||||||||
Sbjct 456 AGATACTCTTCTTCCGGGGATGAAACTGGGTTTCAATGTCAAGACCGGAAAGAGATGGGA 515
Query 546 ACTGACATCATGGCTAGGTGATACTTTACCTGCTTCTGGATCTCTTGTCTTTGGGATGGA 605
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 516 ACTGACATCATGGCTAGGTGATACTTTACCCGCTTCTGGATCTTTTGTCTTTGGGATGGA 575
Query 606 TGCTAATATTACAAACCGGTTGACCATCTTGTGGCGTGGAAACATGTATTGGGCAAGTGG 665
|| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||
Sbjct 576 TGATAATATTACAAACCGGTTGACCATCTTGTGGCTTGGTAACGTGTATTGGGCAAGTGG 635
Query 666 GCTCTGGTTTAAGGGTGGATTTTCCTTGGATGAA-TTAAATGACTAT-GGTTTCCTCTTT 723
|||||||||||||||||| ||||| ||||| ||| ||||| || | |||||| ||||
Sbjct 636 GCTCTGGTTTAAGGGTGGCTTTTCGTTGGA-GAAATTAAAC-ACGAACGGTTTCATCTTC 693
Query 724 TCCTTCATTTCAACCGAGAGTGAACACTATTTTATGTATTCAGATGATCACAAATATGCT 783
|||||| |||||||||| |||||||| |||||||||||||||| |||| | || |||| |
Sbjct 694 TCCTTCGTTTCAACCGAAAGTGAACATTATTTTATGTATTCAGGTGATGAGAACTATGGT 753
Query 784 GGAACATTATTTCCC-GCTATAATGATAGACCAACAGGGAATTTTGCA 830
||| |||||||||| | |||| |||||||||||| || | ||||||
Sbjct 754 GGACCATTATTTCCTAGG-ATAAGGATAGACCAACAAGGCAGTTTGCA 800
Score = 339 bits (183), Expect = 1e-91
Identities = 205/216 (95%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 1 ATGTGGTCAAATGGCATCTTTCTCAttttttttACTTTGTCTCTCTTGTTAGGACAATCA 60
|||||||||||| |||||||||||| | |||||||||| | |||||| ||||||||||||
Sbjct 1 ATGTGGTCAAATTGCATCTTTCTCACTCTTTTTACTTTTTATCTCTTCTTAGGACAATCA 60
Query 61 TGTTGTGAAACAGATACGCTACTGCAGGGTCAGTACTTGAAAGATGGGCAAGAGCTCGTT 120
|| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TGCTGTCAAACAGATACCCTACTGCAGGGTCAGTACTTGAAAGATGGGCAAGAGCTCGTT 120
Query 121 TCAGCTTTCAATATCTTCAAACTAAAGTTTTTCAACTTGGAGAATTCAAGCAACTGGTAT 180
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 121 TCAGCTTTCAATATCTTCAAACTCAAGTTTTTCAACTTCGAGAATTCAAGCAACTGGTAT 180
Query 181 CTTGGAATTTGGTACAACAATTTTTATCTTAGTGGT 216
||||||||||||||||||||||||||||||||||||
Sbjct 181 CTTGGAATTTGGTACAACAATTTTTATCTTAGTGGT 216
Score = 89.8 bits (48), Expect = 1e-16
Identities = 52/54 (96%), Gaps = 0/54 (0%)
Strand=Plus/Plus
Query 1274 AGAGGCTTCCAACACTGAGGGTTGGTTCAACAATAGACCAAGAAATGCTACTAC 1327
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1418 AGAGGCTTTCAACACTGAGAGTTGGTTCAACAATAGACCAAGAAATGCTACTAC 1471
> AT1G67520.1 | Symbols: | lectin protein kinase family protein
| chr1:25302726-25305857 REVERSE LENGTH=2387
Length=2387
Score = 830 bits (449), Expect = 0.0
Identities = 712/836 (85%), Gaps = 29/836 (3%)
Strand=Plus/Plus
Query 1 ATGTGGTCAAATGGCATCTTTCTCAt-tttttttACTTTGTCTCTCTTGTTAGGACAATC 59
||||| ||||||||||||||| || | | || ||||||| ||||||||||||||| ||||
Sbjct 1 ATGTGTTCAAATGGCATCTTTGTC-TCTCTTCTTACTTTATCTCTCTTGTTAGGAAAATC 59
Query 60 ATGTTGTGAAACAGATACGCTAC-TGCAGGGTCAGTACTTGAAAGATGGGCAAGAGCTCG 118
||| |||||||||||||||||| | |||||||||| |||||||||||||||||||||||
Sbjct 60 ATGCAGTGAAACAGATACGCTACAT-CAGGGTCAGTTCTTGAAAGATGGGCAAGAGCTCG 118
Query 119 TTTCAGCTTTCAATATCTTCAAACTAAAGTTTTTCAACTTGGAGAATTCAAG-CAACTGG 177
|||| ||||| || ||||||||||| |||||||||||||| ||||||| || |||| |
Sbjct 119 TTTCTGCTTTTAAAATCTTCAAACTCAAGTTTTTCAACTTTAAGAATTC-AGAAAACTTG 177
Query 178 TATCTTGGAATTTGGTACAACAATTTTTATCTTAGTGGTAATAAGAAGTATGGTGATATC 237
|||||||||||||||| ||||||| |||||| | | || || ||||| |
Sbjct 178 TATCTTGGAATTTGGTTCAACAATCTTTATC-------T--T---AA-TA--CTGATAGC 222
Query 238 CAGGATAAAGCTGTTTGGATTGCTAACCGTAACAATCCAATTTTGGGTCGCTCTGGAAGC 297
||||| | | |||| |||||||||||||||||||||||||| | | ||||||||||||
Sbjct 223 CAGGACAGACCTGTCTGGATTGCTAACCGTAACAATCCAATCTCAGACCGCTCTGGAAGC 282
Query 298 CTCACAGTGGACTCTCTTGGCCGATTGAGGATTTTAAGAGGAGCATCAAGCC-TGCTTGA 356
||||||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||
Sbjct 283 CTCACAGTGGATTCTCTTGGCAGATTGAAGATTTTAAGAGGAGCATCAA-CCATGCTTGA 341
Query 357 GCTAAGCCCTACGGAAACCACAGGAAACACAACCCTTAAGCTGTTGGATTCTGGAAATCT 416
||||||| ||| ||||||||| |||||||||||||| |||| |||||||||||||||||
Sbjct 342 GCTAAGCTCTATAGAAACCACAAGAAACACAACCCTTCAGCTTTTGGATTCTGGAAATCT 401
Query 417 TCAGCTCCAAGAGATGGATTCTGATGGATCGATGAGGCAGATTCTGTGGCAAAGTTTTGA 476
||||||||||||||||||| ||||||||||||||| || | || ||||||||||||| ||
Sbjct 402 TCAGCTCCAAGAGATGGATGCTGATGGATCGATGAAGCGGGTTTTGTGGCAAAGTTTCGA 461
Query 477 TTATCCAACGGATACCCTTCTTCCTGGTATGAAACTTGGTTTCAATGTTAAGAATGGGAA 536
||||||||| ||||| ||||||||||| |||||||| |||||| ||| |||| ||||
Sbjct 462 TTATCCAACAGATACTCTTCTTCCTGGGATGAAACTAGGTTTCGATGGCAAGACCAGGAA 521
Query 537 GAGATGGGAACTGACATCATGGCTAGGTGATACTTTACCTGCTTCTGGATCTCTTGTCTT 596
|||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 522 GAGATGGGAACTTACATCATGGTTAGGTGATACTTTACCTGCTTCTGGATCTTTTGTCTT 581
Query 597 TGGGATGGATGCTAATATTACAAACCGG-TTGACCATCTTGTGGCGTGGAAACATGTATT 655
|||||||||| ||||||| |||||| | |||||||||||||||||||||||||||||||
Sbjct 582 TGGGATGGATACTAATATCACAAAC-GTATTGACCATCTTGTGGCGTGGAAACATGTATT 640
Query 656 GG-GCAAGTGGGCTCTGGTTTAAGGGT-GGATTTTCCTTGGATGAATTAAATGACTATGG 713
|| | | | ||||| ||| ||| ||| || || ||| || || ||||| || | ||
Sbjct 641 GGAGTA-GCGGGCTTTGGAATAAAGGTCGG-TTCTCCGAAGAGGAGTTAAACGAATGCGG 698
Query 714 TTTCCTCTTTTCCTTCATTTCAACCGAGAGTGAACACTATTTTATGTATTCAGATGATCA 773
|||||||||||||||| |||||||| |||||| ||| |||||||||||||||| ||||||
Sbjct 699 TTTCCTCTTTTCCTTCGTTTCAACCAAGAGTGGACAATATTTTATGTATTCAGGTGATCA 758
Query 774 CAAATATGCTGGAACATTATTTCCCGCTATAATGATAGACCAACAGGGAATTTTGC 829
| |||| ||||||| ||||| | |||||||||||| |||| || |||||||
Sbjct 759 GGACGATGCCAGAACATTTTTTCCAACCATAATGATAGACGAACAAGGCATTTTGC 814
Score = 660 bits (357), Expect = 0.0
Identities = 453/500 (91%), Gaps = 4/500 (1%)
Strand=Plus/Plus
Query 1332 CTCTGATGCAAACAAGCTCGGTGAAGGAGGTTTTGGTCCTGTATATAAGGGGA-GTTTAA 1390
||| |||| |||||||||||||||||||||||||||||||||||||||||| | ||| |
Sbjct 1263 CTCCGATGAAAACAAGCTCGGTGAAGGAGGTTTTGGTCCTGTATATAAGGGAAAGTT-AT 1321
Query 1391 TAGATGGGGAGGAAGTGGCTATCAAAAGACTATCATTAGCATCCGGGCAAGGATTAGTGG 1450
|| ||||||| |||||||||||||| |||||||| |||||||| || |||||||||||||
Sbjct 1322 TAAATGGGGAAGAAGTGGCTATCAAGAGACTATCTTTAGCATCTGGCCAAGGATTAGTGG 1381
Query 1451 AGTTCAAGAACGAAGCTATGCTTATTGCAAAACTTCAGCACACAAATCTTGTTCAG-TTG 1509
|||| || ||||||||||| ||||||||||| |||||||| ||||||||||||||| ||
Sbjct 1382 AGTTTAAAAACGAAGCTATACTTATTGCAAAGCTTCAGCATACAAATCTTGTTCAGGTTT 1441
Query 1510 CTAGGATGCTGCATAGAGAAGGACGAGAAAATGTTGATTTACGAATACATGCCCAACAAG 1569
||||||| ||||| || || || ||||||||| ||||||| |||||||||| ||||||
Sbjct 1442 -TAGGATGTTGCATCGAAAAAGATGAGAAAATGCTGATTTATGAATACATGCAGAACAAG 1500
Query 1570 AGCCTTGACTACTTCCTCTTTGATCCCTTGAGGAAAAACGTTTTGGATTGGACACTGCGG 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1501 AGCCTTGACTACTTCCTCTTTGATCCCTTGAGGAAAAACGTTTTGGATTGGACGTTGCGG 1560
Query 1630 TTCAGGATCATGGAAGGGATAATTCAAGGGCTTTTGTACCTTCACAAGTACTCGAGATTG 1689
||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||
Sbjct 1561 TTCAGGATCATGGAAGGAATCATTCAAGGGCTTTTGTACCTTCACAAGTACTCAAGATTG 1620
Query 1690 AAAGTGATACACAGAGACATCAAAGCCAGCAACATTTTACTGGACGAGGATATGAATCCC 1749
||||||||||| |||||||||||||| || || ||||| || |||||||||||||||||
Sbjct 1621 AAAGTGATACATAGAGACATCAAAGCTAGTAATATTTTGCTAGACGAGGATATGAATCCG 1680
Query 1750 AAAATATCCGATTTTGGAATGGCTCGGATATTTGGAGCGCAAGAATCCAGAGCTAACACC 1809
|||||||| ||||||||| |||||||||||||||||||| ||||| | ||||| ||||||
Sbjct 1681 AAAATATCGGATTTTGGATTGGCTCGGATATTTGGAGCGGAAGAAACAAGAGCCAACACC 1740
Query 1810 AAAAGAGTTGCTGGCACATT 1829
||||||||||||||||||||
Sbjct 1741 AAAAGAGTTGCTGGCACATT 1760
Score = 174 bits (94), Expect = 3e-42
Identities = 167/200 (84%), Gaps = 13/200 (7%)
Strand=Plus/Plus
Query 897 TTCTTTTAGAGAGACAGTATCGGCTTTCTCAAGCAATGGATTTATACTTAATGAGACTGG 956
|||||| |||| ||||||||| ||| | |||||||||| ||| ||| | | | |
Sbjct 915 TTCTTTCAGAGTGACAGTATCTTCTTCCGCAAGCAATGGTTTTGTAC-T--T---A---G 965
Query 957 TGGAAGGTTTAGTTCAGCTGATTGCCA-TGCTATATGTATGCAAAACTCTTCTTGTCTTG 1015
||||| ||||||||||| |||||| || |||||||||| |||||||||||||||||||||
Sbjct 966 TGGAACGTTTAGTTCAGTTGATTG-CAGTGCTATATGTTTGCAAAACTCTTCTTGTCTTG 1024
Query 1016 CCTATGCTTCTACCAATCTGGATGGTACGGGCTGCGAAATCTGGAATA-TTGATCCTACC 1074
|||||||||| ||| | | |||||||||||| |||||||||||||||| || ||||||||
Sbjct 1025 CCTATGCTTCAACCGAGCCGGATGGTACGGGTTGCGAAATCTGGAATACTT-ATCCTACC 1083
Query 1075 GACAAAAAGTCGTCTTCTCA 1094
||||| |||| |||||||
Sbjct 1084 AACAAAGGGTCGGCTTCTCA 1103
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114356841510
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5