BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479065
Length=1674
Score E
Sequences producing significant alignments: (Bits) Value
AT3G16110.1 | Symbols: ATPDIL1-6, ATPDI4, PDI4, PDIL1-6 | PDI-l... 2449 0.0
AT1G52260.1 | Symbols: ATPDIL1-5, ATPDI3, PDI3, PDIL1-5 | PDI-l... 1094 0.0
> AT3G16110.1 | Symbols: ATPDIL1-6, ATPDI4, PDI4, PDIL1-6 | PDI-like
1-6 | chr3:5460793-5463760 REVERSE LENGTH=1861
Length=1861
Score = 2449 bits (1326), Expect = 0.0
Identities = 1570/1682 (93%), Gaps = 39/1682 (2%)
Strand=Plus/Plus
Query 1 ATGTTGATGAAACCAAAACCCAGTTCTAAATTTTCAATCTTGTTCACCTTCCTCATACTT 60
||||||| |||||||||||||| ||| |||||||||||||||||||| ||||| | ||
Sbjct 95 ATGTTGACGAAACCAAAACCCAATTCCAAATTTTCAATCTTGTTCACTTTCCTTTTGCTC 154
Query 61 CTCAGTCTCTTAATCGTCG-TGGTCCGTTCCTCTGATGTCGCCGTCGAAGGTAAAGAATC 119
|||||| |||||||| ||| || | ||||||||||||||||||||| | ||| |
Sbjct 155 CTCAGTTTCTTAATCTTCGTTGCT-CGTTCCTCTGATGTCGCCGTC----G--AAG---C 204
Query 120 CGGATCCGAGGAAGAATTAGACGATCTGGAGCAGCT-CTTAGCGGTGGATGAACAATTGC 178
||||||||||||||||||||||||||| |||||||| ||| ||||| || ||||||||||
Sbjct 205 CGGATCCGAGGAAGAATTAGACGATCTAGAGCAGCTCCTT-GCGGTTGACGAACAATTGC 263
Query 179 AGGAAGAGAGACCAGAGCAACAATCTGAAGCGGAGACGGTGAGCAAGGCGCAGAGGATTG 238
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 264 AGGAAGAGAGACCAGAGCAACAATCTGAAGCGGAGACGGTGAGCAAGGCGCAGCGGATCG 323
Query 239 TGGTGGAACTCAATGGAGACAACACGAAGCGGTTGATTGATGGGAATGAGTATGTGATGG 298
| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 324 TTGTGGAACTCAACGGAGACAATACGAAGCGATTGATTGATGGGAATGAGTATGTGATGG 383
Query 299 TTTTAGGTTACGCGCCGTGGTGTGCGAGGAGTGCTGAGCTAATGCCGAGATTTGCGGAGG 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 TTTTAGGTTACGCGCCGTGGTGTGCGAGGAGTGCTGAGCTAATGCCGAGATTTGCGGAGG 443
Query 359 CGGCGACGGATTTGAAGGAGATTGGTAGTTCGGTTTTGATGGCTAAGATTGACGGTGAGA 418
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct 444 CGGCGACGGATTTGAAGGAAATTGGTAGTTCGGTTTTGATGGCGAAGATTGACGGCGAGA 503
Query 419 GGTATTCGAAAGTGGCGTCGCAGCTTGAGATTAAAGGTTTCCCAACGCTTCTTCTGTTTG 478
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 504 GGTATTCGAAAGTGGCGTCTCAGCTTGAGATTAAAGGTTTCCCAACGCTTCTTCTGTTTG 563
Query 479 TTAATGGCACATCTCAGTCTTATACTGGTGGATTTTCCTCAGAGGAGATAGTGATTTGGG 538
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 564 TTAATGGCACATCTCAGTCTTACACTGGTGGATTTTCCTCAGAGGAGATAGTGATTTGGG 623
Query 539 TACAAAAGAAGACTGGTGTGCCTACTATTAAACTTGATACAGTTGATAAAGCTTCAGGAT 598
| |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||
Sbjct 624 TGCAAAAGAAGACTGGTGCGTCTACTATTAAACTTGATACAGTTGATGAAGCTTCAGGAT 683
Query 599 TTCTGAAGAAGCATCATACTTAT-ATTGTTGGTCTATTCAAAAAGTCTGAGGATTCTTCT 657
||||||||||||||||||||| | ||| | ||||||||| ||||||||||||||||||||
Sbjct 684 TTCTGAAGAAGCATCATACTT-TCATTCTCGGTCTATTCGAAAAGTCTGAGGATTCTTCT 742
Query 658 GGATATGATGAATTTGTAAAAGCTGCGTCGTTAGACAATGAAATCCAGTTTGTAGAAACA 717
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 743 GGACATGATGAATTTGTAAAAGCTGCGTCGTTAGACAATGAAATCCAGTTTGTAGAAACA 802
Query 718 AGCAGCAGTGATGTTGCTAAGCTTCTCTTCCCTAACCCTAAAACCAATAATGTGTTTGTT 777
||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 803 AGCAGCATTGATGTTGCTAAGCTTCTCTTCCCTAACCTTAAAACCAACAATGTGTTTGTT 862
Query 778 GGCTTGGTTAAAACTGAGGCTGAAAGGTACACTGCATACGGTAAGCTCCTTGATGATGGA 837
|| ||||||||||||||||||| || | | | || | | || | | ||||||||
Sbjct 863 GGATTGGTTAAAACTGAGGCTG-AA---A-A--G--TA---T-A-CTTCAT-ATGATGGA 907
Query 838 TCTCT-CCAAGCCGAAAAGATATTGGAATTTCTGAACAGTAATAAATTCCCTTTGGTTAC 896
|| | ||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 908 CCT-TGCCAAGCCGAGAAGATAGTGGAATTTCTGAACAGTAATAAATTCCCTTTGGTTAC 966
Query 897 AAAATTGACTGAATCCAACACCGTTCGTGTTTA-TGCCAGTCCAGTCAAGCTTCAGGTTA 955
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 967 AAAATTGACTGAATCCAACACCGTTCGTGTTTACT-CCAGTCCAGTCAAGCTTCAGGTTA 1025
Query 956 TGGTCTTTTCAAAGAGTGATGACTTTGGAAGTCTTGCTCAGCCTCTAGAAAATATTGCAA 1015
|||||||||| |||| ||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct 1026 TGGTCTTTTCGAAGACTGATGACTTTGAAAGTCTAGCTCAGCCTCTAGAAGATATTGCAA 1085
Query 1016 GAAAGTTCATATCAAAGCTTATGCTGATATATATTGACATATCAAATGAAAACCTCGCAA 1075
||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1086 GAAAGTTCAAATCAAAGCTTATGTTGATATATATTGACATATCAAACGAAAACCTCGCAA 1145
Query 1076 TGCCATTCTTGACATTGTTCGGGATAGAAGATGCAAAGAAAACTGTTGTTGCTGCGTTCG 1135
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1146 TGCCATTCTTGACATTATTCGGGATAGAAGATGCAAAGAAAACTGTTGTTGCTGCATTCG 1205
Query 1136 ACAACAACTTGAACTCCAAGTTTTTGCTTGAGTCGGATCCATCTCCTAGCAATATAGAAG 1195
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1206 ACAACAACCTGAACTCCAAGTATTTGCTTGAGTCGGATCCATCTCCTAGCAATATAGAAG 1265
Query 1196 AATTTTGTTTCGGACTTGCGCATGGAACTGTTTCACCTTACTATAAGTCACAGCCAATTC 1255
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||
Sbjct 1266 AATTTTGTTTCGGACTTGCTCATGGAACTGTTTCAGCTTACTATAAGTCACAGCCTATTC 1325
Query 1256 CAGATAATCAAAATGCAAGCGTAGTGGCTGTGGTCGGCAGGACTTTTGATGAACTGGTCT 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1326 CAGATAATCAAAATGCAAGCGTAGTGGCTGTGGTCGGCAGGACTTTTGATGAAGTGGTCT 1385
Query 1316 TGAAGAGCAGCGAGAATGTTCTTCTTGAGGTGCACACACCATGGTGTATTAACTGTGAGG 1375
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1386 TGAGGAGCAGCGAGAATGTTCTTCTTGAGGTGCACACACCATGGTGTATTAACTGTGAGG 1445
Query 1376 CTCTGAGTAAACAGGTTGAAAAGTTGTCGAAACACTTTCAAGGGTTTGAGAATCTTGTTT 1435
||||||||||||||||||| ||||||||| |||||||| |||||||||| |||||||| |
Sbjct 1446 CTCTGAGTAAACAGGTTGAGAAGTTGTCGCAACACTTTAAAGGGTTTGAAAATCTTGTCT 1505
Query 1436 TTGCAAGGATAGACGCTTCTGCAAACGAGCATCCTAAGCTAACGGTTGATGATTATCCGA 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1506 TTGCAAGGATAGACGCTTCTGCAAACGAGCATCCTAAGCTAACGGTTGATGATTACCCGA 1565
Query 1496 CAATCTTGCTTTACAAAGCC-GGTGAAAAGGAGAATCCGTTAAAGCTTTCGACGAAATCC 1554
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct 1566 CAATCTTGCTTTACAA-GACTGGTGAAAAGGAGAATCCGTTAAAGCTTTCGACGAAATCC 1624
Query 1555 AGTGCAAAGGAAATGGCTGTTTTAATCAACAAAGAGTTGAAATCGAAGGATCCGTCTGCT 1614
||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct 1625 AGTGCGAAGGATATGGCTGTTTTAATCAACAAAGAGTTGAAATGGAAGGATCAGTCTGGT 1684
Query 1615 AAAGATGAGTTATAGAAGC-ATCTGGAATCTGACGT-AGGGATCAAATTTATAGTTGTTT 1672
||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||||||
Sbjct 1685 AAAGATGAGTTATAGAAGCCATCTGAAATCTGA-GTTAGGGATCAAATTAATAGTTGTTT 1743
Query 1673 GT 1674
||
Sbjct 1744 GT 1745
> AT1G52260.1 | Symbols: ATPDIL1-5, ATPDI3, PDI3, PDIL1-5 | PDI-like
1-5 | chr1:19460570-19463445 FORWARD LENGTH=1837
Length=1837
Score = 1094 bits (592), Expect = 0.0
Identities = 1220/1517 (80%), Gaps = 68/1517 (4%)
Strand=Plus/Plus
Query 141 CGATCTGGAGCAGC-TCTTAGCGGTGGATGAACAATTGCAGGAAGAGAGACCAGAGCAAC 199
|||||| || |||| || |||| || || || ||| | || ||||| |||| |||||||
Sbjct 262 CGATCTAGACCAGCTTC-TAGCAGTAGACGAGCAACTACAAGAAGATCGACCTGAGCAAC 320
Query 200 AATCTGAAGCGGAGACGGTGAGCAAGGCGCAGAGGATTGTGGTGGAACTCAATGGAGACA 259
|||| ||||| || || || ||||| || ||||| || || | || ||||| || ||
Sbjct 321 AATCAGAAGCCGAAACAGTAAGCAAAGCTCAGAGAATCGTACTAGAGCTCAACGGTGATT 380
Query 260 ACACGAAGCG-GTTGATTGATGGGAATGAGTAT-GTGATGGTTTTAGGTTACGCGCCGTG 317
|||||||||| | |||| ||||| || |||| | |||||||| ||||| |||||||| ||
Sbjct 381 ACACGAAGCGAG-TGATCGATGGAAACGAGT-TCGTGATGGTGTTAGGGTACGCGCCTTG 438
Query 318 GTGTGCGAGGAGTGCTGAGCTAATGCCGAGATTTGCGGAGGCGGCGACGGATTTGAAGGA 377
||||||||| ||||| ||||| ||||||||||| ||||| || ||||||| |||||| ||
Sbjct 439 GTGTGCGAGAAGTGCGGAGCTTATGCCGAGATTCGCGGAAGCTGCGACGGCTTTGAAAGA 498
Query 378 GATTGGTAGTTCGGTTTTGATGGCTAAGATTGACGGTGAGAGGTATTCGAAAG-TGGCGT 436
|||||| |||||||||||||||||||||||||||||||| ||||||||| ||| | || |
Sbjct 499 GATTGGGAGTTCGGTTTTGATGGCTAAGATTGACGGTGATAGGTATTCG-AAGATTGCAT 557
Query 437 CGCAGCTTGAGATTAAAGGTTTCCCAACGCTTCTTCTGTTTGTTAATGGCACATCTCAGT 496
|| |||||||||||||||||||||| ||||||||||| |||||||||||||| |||| |
Sbjct 558 CGGAGCTTGAGATTAAAGGTTTCCCTACGCTTCTTCTCTTTGTTAATGGCACTTCTCT-T 616
Query 497 -CTTATACTGGTGGATTTTCCT-CAGAGGAGATAGTGATTTGGGTACAAAAGAAGACTGG 554
|||| | |||||||| ||| | | ||||| ||||| |||||||| ||||||||||||||
Sbjct 617 ACTTACAATGGTGGATCTTC-TGCGGAGGATATAGTCATTTGGGTGCAAAAGAAGACTGG 675
Query 555 TGTGCCTA-CTATTAAACTTGATACAGTTGATAAAGCTTC-AGGATTTCT-GAAGAAGCA 611
|| || | | |||| |||| ||||||||||| ||||| | || |||||| || ||| |
Sbjct 676 TGCACCAATC-ATTACACTTAATACAGTTGATGAAGCTCCGAG-ATTTCTTGAC-AAGTA 732
Query 612 TCATACTTATATTGTTGGTCTATTCAAAAAGTCTGAGGATTCTTCTGGATATGATGAATT 671
|||||||| | || ||||||| || | |||| ||||| |||| | ||| | |||||
Sbjct 733 TCATACTTTTGTTCTTGGTCTGTTTGAGAAGTTTGAGGGTTCTGA-GCATA--ACGAATT 789
Query 672 TGTAAAAGCTGCGTCGTT-AGACAATGAAATCCAGTTTGTAGAAACAAGC-AGCAGTGAT 729
||| |||||||| | | |||| ||||||| |||||| |||||||| | | || |||
Sbjct 790 TGTTAAAGCTGC-TAAATCAGACGATGAAATACAGTTTATAGAAACACGTGAT-AGCGAT 847
Query 730 GTTGCTAAGCTTCTCTTCCCTAACCCTAAAACCAATAATGTGTTTGTTGGCTTGGTTAAA 789
||||| || ||||| || ||| | | ||||| ||||||||||||| |||| |||||||||
Sbjct 848 GTTGCGAAACTTCTTTTTCCTGATCTTAAAAGCAATAATGTGTTTATTGGGTTGGTTAAA 907
Query 790 ACTGAGGCTGAAAGGTACACTGCATACGGTAAGCTCCTTGATGATGGATCTCTCCAAGCC 849
||||||||||||||||||||| || || | |||| | |||| | |||
Sbjct 908 CCTGAGGCTGAAAGGTACACTG--TA---TA---T----GATG--G-ATCT-TACAAAAT 951
Query 850 GAA-AAGATATTGGAATTTCT-GAACAGTAATAAATTCCCTTTGGTTACAAAATTGACTG 907
| | |||||||| || ||||| | ||| || || || || ||| |||||||||||||||
Sbjct 952 GGAGAAGATATTAGAGTTTCTAGG-CAGCAACAAGTTTCCATTGTTTACAAAATTGACTG 1010
Query 908 AATCCAACACCGTTCGTGTTTA-TGCCAGTCCAGTCAAGCTTCAGGTTATGGTCTTTTCA 966
|| |||| || ||| | ||||| | | ||||| || ||||||||||||||| |||| ||
Sbjct 1011 AAACCAATACTGTTTGGGTTTACT-CTAGTCCTGTTAAGCTTCAGGTTATGCTCTTCTCC 1069
Query 967 AAGAG-TGATGACTTTG-GAAGTCTTGCTCAGCCTCTAGAAAATATTGCAAG-AAAGTTC 1023
||| | |||||| ||| ||| |||||||||||||| ||| |||||||||| ||| ||
Sbjct 1070 AAG-GCTGATGATTTTCAGAAA-CTTGCTCAGCCTCTTGAAGATATTGCAAGGAAATTTA 1127
Query 1024 ATATCAAAGCTTATGCTGATATATATTGACATATCAAATGAAAACCTCGCAATGCCATTC 1083
| ||| ||||||||| | |||||| | || ||| ||||||| ||||| ||||||||||||
Sbjct 1128 A-ATCGAAGCTTATGTTTATATATGTCGATATAACAAATGAGAACCTTGCAATGCCATTC 1186
Query 1084 TTGA-CATTGTTCGGGATAGAAGATGCAAAGAAAACTGTTGTTGCTGCGTTCGACAACAA 1142
|||| | || ||||| || |||| || || ||||||||||||||||| || || |||||
Sbjct 1187 TTGATC-TTATTCGGAATTGAAGCTGGGAATAAAACTGTTGTTGCTGCTTTTGATAACAA 1245
Query 1143 CTTGAACTCCAAGTTTTTGCTTGAGTCGGATCCATCTCCTAGCAATATAGAAGAATTTTG 1202
| |||||||||||| |||||| ||||| |||||||| || | || ||||||||| |||||
Sbjct 1246 CCTGAACTCCAAGTATTTGCTCGAGTCAGATCCATCACCAAACAGTATAGAAGAGTTTTG 1305
Query 1203 TTTC-GGACTTGCGCATGGAACTGTTTCACCTTACTATAAGTCACAGCCAATTCCAGATA 1261
|| | |||||||| |||||||||||||||| |||||||| |||| ||||| |||| ||||
Sbjct 1306 TT-CAGGACTTGCTCATGGAACTGTTTCACGTTACTATAGGTCAGAGCCAGTTCCTGATA 1364
Query 1262 ATCAAAATGCAAGCGTAGTGGCTGTGGTCGGCAGGACTTTTGATGAACTGGTCTTGAAGA 1321
|| |||| |||||| ||||| ||||||| || | ||||||||||| |||| || || |
Sbjct 1365 ATGAAAACGCAAGCATAGTGACTGTGGTAGGAAAGACTTTTGATGGGTTGGTATTAAACA 1424
Query 1322 GCAGCGAGAATGTTCTTCTTGAGGTGCACACACCATGGTGTATTAACTGTGAGGCTCTGA 1381
|| |||||||||||||||||||||| || ||||| ||||| | ||||| ||||| || |
Sbjct 1425 GCCGCGAGAATGTTCTTCTTGAGGTACATACACCGTGGTGCGTGAACTGCGAGGCACTAA 1484
Query 1382 GTAAACAGGTTGA-AAAGTTGTCGAAACACTTTCAAGGG-TTTGAGAATCTTGTTTTTGC 1439
| ||||| | || ||| ||| | || || |||||| || ||||||||||||||||||||
Sbjct 1485 GCAAACAAATCGAGAAA-TTGGCTAAGCA-TTTCAAAGGCTTTGAGAATCTTGTTTTTGC 1542
Query 1440 AAGGATAGACGCTTCTGCAAACGAGCATCCTAAGCTA-ACGGTTGATGAT---TATCCGA 1495
||| || || || |||||||| |||||| |||| ||| | |||||||||| |||||||
Sbjct 1543 AAGAATTGATGCATCTGCAAATGAGCATACTAAACTACA-GGTTGATGATAAATATCCGA 1601
Query 1496 CAATCTTGCTTTACAAAGCCGGTGAAAAGGAGAATCCGTTAAAGCTTTCGACGAAATCCA 1555
||||||||| |||||| | || ||||||||||| ||||||||||| || ||||||| |
Sbjct 1602 TAATCTTGCTCTACAAATCTGGCGAAAAGGAGAAACCGTTAAAGCTATCAACGAAATTGA 1661
Query 1556 GTGCAAAGGAAATGGCTGTTTTAATCAACAAAGAGTTG---AAATCGAAGGATCCGTCTG 1612
| || ||||| || |||||||| |||||| |||||||| ||| ||||| || |||||
Sbjct 1662 GCGCGAAGGACATAGCTGTTTTTATCAACGAAGAGTTGTTGAAACCGAAGAATGGGTCTG 1721
Query 1613 CTAAAGATGAGTTATAG 1629
|||||||||| || |||
Sbjct 1722 CTAAAGATGAATTGTAG 1738
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82730498160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5