BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479101
Length=1050
Score E
Sequences producing significant alignments: (Bits) Value
AT3G16440.1 | Symbols: ATMLP-300B, MEE36, MLP-300B | myrosinase... 1419 0.0
AT3G16450.1 | Symbols: | Mannose-binding lectin superfamily pr... 941 0.0
AT3G16420.1 | Symbols: PBP1, JAL30 | PYK10-binding protein 1 | ... 446 3e-124
AT3G16430.1 | Symbols: JAL31 | jacalin-related lectin 31 | chr3... 429 3e-119
> AT3G16440.1 | Symbols: ATMLP-300B, MEE36, MLP-300B | myrosinase-binding
protein-like protein-300B | chr3:5585944-5587750
FORWARD LENGTH=1179
Length=1179
Score = 1419 bits (768), Expect = 0.0
Identities = 878/933 (94%), Gaps = 0/933 (0%)
Strand=Plus/Plus
Query 10 ATCAAAAGCAAGCAAAAGATGGTTCAAAAGGTGGAAGCACAAGGAGGTATGGGAGGAAAT 69
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||
Sbjct 50 ATCAAAAGCAAGCAAAAGATGGCTCAAAAGGTGGAAGCACAAGGAGGTATTGGAGGAGAT 109
Query 70 GTATGGGATGATGGTGTTCACGACGGTGTTAGAAAGGTGCATGTAGGGCAAGGCCAAGAT 129
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||
Sbjct 110 GTATGGGATGATGGTGCTCACGACGGCGTTAGAAAGGTGCATGTAGGGCAAGGCCTTGAT 169
Query 130 GGTGTGTCGTTTATTAATGTCGTGTACGAGAATGGTTCAGAGGAAGTTGTAGGAGGTGAA 189
||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 170 GGTGTTTCGTTTATCAATGTCGTGTACGAGAATGGTTCACAGGAAGTTGTAGGAGGTGAA 229
Query 190 CATGGAAAGAAGTCACTTATTGGAATCGAAACATTTGAGGTTGATGCAGACGACTACATC 249
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 230 CATGGAAAGAAGTCACTAATTGGAATCGAAACGTTTGAGGTTGATGCAGACGACTACATC 289
Query 250 GTAGCAGTGCAGGTGACCTACGACAAAATATTTGGCTTTGACTCTGAGGTCATTACATCT 309
|||||||||||||||||||| |||||||||||||||| |||||| || |||| |||||
Sbjct 290 GTAGCAGTGCAGGTGACCTATGACAAAATATTTGGCTATGACTCCGACATCATCACATCC 349
Query 310 ATCACCTTCTCTACATTCAAGGGAAAAACCTCTCCACCCTTTGGCTTAGATACCGAAAAT 369
|| ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||
Sbjct 350 ATAACCTTCTCTACATTCAAGGGAAAAACCTCGCCACCCTACGGATTAGATACCGAAAAT 409
Query 370 AAGTTTGTACTCAAGGaaaaaaaTGGTGGCAAACTTGTTGGGTTCCATGGACGCGCTGGC 429
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 410 AAGTTTGTACTCAAGGAAAAGAACGGTGGCAAACTTGTTGGGTTCCATGGACGCGCTGGC 469
Query 430 GAAATTCTATATGCTCTTGGAGCATATTTTACTACAACCACAACTCCTTTGAATCCTGCC 489
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 470 GAAATTCTATATGCTCTTGGAGCGTATTTTACTACAACCACAACTCCTTTGACTCCTGCC 529
Query 490 AAGAAACTACCAGCAGTTGGTGGTGACGAAGGAACTGCATGGGATGATGGTGCTTACGAT 549
||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 530 AAGAAACTACCGGCTGTTGGTGGTGACGAAGGAACTGCCTGGGATGATGGTGCTTTCGAT 589
Query 550 GGTGTTAAGAAAGTGTATATAGGGCAAGCCCAAGATGGTATATCAGCAGTAAAGTTTGTG 609
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct 590 GGTGTTAAGAAAGTGTATATAGGGCAAGCCCAAGATGGTATATCGGCCGTGAAGTTTGTG 649
Query 610 TACGACAAGGGCGCTGCGGATATTGTAGGAGATGAGCATGGAAATGATACTCTACTCGGA 669
||||| |||||||| | |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 650 TACGATAAGGGCGCCGAGGATATTGTAGGAGATGAACATGGAAATGATACTCTACTCGGA 709
Query 670 TTTGAAGAGTTCCAACTTGACTATCCAAGTGAATACATTACAGCAGTTGAAGGCACATAT 729
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 710 TTTGAAGAGTTCCAACTTGACTATCCAAGTGAATATATTACTGCAGTTGAAGGCACATAT 769
Query 730 GATAAAATCTTTGGTAGTGAGACTGAAGTCATAAATATGCTTAGGTTCAAGACTAATAAG 789
|| ||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 770 GACAAAATATTTGGTTTTGAGACTGAAGTCATAAATATGCTTAGGTTCAAAACTAATAAG 829
Query 790 CAAACGTCTCCTCCCTTTGGAATTGAAGCTGGCACAGCCTTCGAACTCAAAGAGGAAGGT 849
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 830 AAAACGTCTCCTCCCTTTGGAATTGAAGCTGGCACAGCCTTCGAACTCAAAGAAGAAGGT 889
Query 850 TCCAAGATCGTCGGGTTCCATGGAAAAGTCAGTTCGCTGCTTCATCAGTTTGGAGTCCAT 909
| ||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||
Sbjct 890 TGCAAGATCGTCGGGTTTCATGGAAAAGTAAGTGCGGTGCTTCATCAGTTTGGAGTCCAT 949
Query 910 GTCCTTCCAGTCACCAACTGATCATCACATATA 942
||||||| ||||||||||||||||||||||||
Sbjct 950 ATCCTTCCTGTCACCAACTGATCATCACATATA 982
> AT3G16450.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr3:5588486-5590055 FORWARD LENGTH=1273
Length=1273
Score = 941 bits (509), Expect = 0.0
Identities = 787/921 (85%), Gaps = 20/921 (2%)
Strand=Plus/Plus
Query 23 AAAAGATGGTTCAAAAGGTGGAAGCACAAGGAGGTATGGGAGGAAATGT-ATGGGATGAT 81
||||||||| |||||| ||||||||| || || |||||| | | ||||||||||
Sbjct 103 AAAAGATGGCTCAAAAAGTGGAAGCAGGGGGTGGCGCCGGAGGAGCT-TCATGGGATGAT 161
Query 82 GGTGTTCACGACGGTGTTAGAAAGGTGCATGTAGGGCAAGGCCAAGATGGTGTGTCGTTT 141
||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 162 GGTGTCCACGATGGCGTTAGAAAGGTGCATGTAGGGCAAGGCCAAGATGGTGTGTCATCT 221
Query 142 ATTAATGTCGTGTACGAGAATGGT-TCAGAGGAAGTTGTAGGAGGTGAACATGGAAAGAA 200
|| || |||||||| | ||| || || |||| |||| |||||||||||| ||||||||
Sbjct 222 ATCAACGTCGTGTATGCGAA-GGACTCTCAGGATGTTGAAGGAGGTGAACACGGAAAGAA 280
Query 201 GTCACTTA-TTGGAATCGAAACATTTGAGGTTGATGCAGACGACTACATCGTAGCAGTGC 259
| ||| ||||| | ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 281 AACG-TTACTTGGATTTGAAACGTTTGAGGTTGATGCAGACGACTACATAGTAGCAGTGC 339
Query 260 AGGTGACCTACGACAAAATATTTGGCTTTGACTCTGAGGTCATTACATCTATCACCTTCT 319
| |||||||||||||| | |||||| |||||||| |||| |||||||| ||||||
Sbjct 340 AAGTGACCTACGACAACGTGTTTGGCCAAGACTCTGACATCATCACATCTATTACCTTCA 399
Query 320 CTACATTCAAGGGAAAAACCTCTCCACCCTTTGGCTTAGATAC-CGAAAATAAGTTTGTA 378
|||||||||||||||||| |||||||||| ||| || || || | |||| |||||||||
Sbjct 400 ATACATTCAAGGGAAAAACATCTCCACCCTATGGATTGGAAACGC-AAAAGAAGTTTGTA 458
Query 379 CTCAAGGaaaaaaaTGGTGGCAAACTTGTTGGGTTCCATGGACGCGCTGGCGAAA-TTCT 437
|||||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||| || |
Sbjct 459 CTCAAGGACAAAAACGGTGGTAAACTTGTTGGCTTCCATGGACGCGCTGGTGAAGCTT-T 517
Query 438 ATATGCTCTTGGAGCATATTTTACTACAACCACAACTCCTTTGAATCCTGCCAAGAAACT 497
|||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||
Sbjct 518 ATATGCTCTTGGAGCATATTTTGCTACAACCACAACTCCTGTGACTCCTGCCAAAAAACT 577
Query 498 ACCAGCAGTTGGTGGTGACGAAGGAACTGCATGGGATGATGGTGCTTACGATGGTGTTAA 557
| | ||| |||||||||| ||||||||||||||||| || ||||| ||||||||||| ||
Sbjct 578 ATCTGCAATTGGTGGTGATGAAGGAACTGCATGGGACGACGGTGCGTACGATGGTGTCAA 637
Query 558 GAAAGTGTATATAGGGCAAGCCCAAGATGGTATATCAGCAGTAAAGTTTGTGTACGACAA 617
||| ||||| |||| |||| ||||||||| |||||||| || ||||||| |||| ||||
Sbjct 638 GAAGGTGTACGTAGGACAAGGCCAAGATGGGATATCAGCCGTTAAGTTTGAGTACAACAA 697
Query 618 GGGCGCTGCGGATATTGTAGGAGATGAGCATGGAAATGA-TACTCTACTCGGATTTGAAG 676
||||| | | |||| ||||||| ||| |||||||| | |||| |||||||||| || |
Sbjct 698 AGGCGCGGAGAATATCGTAGGAGGTGAACATGGAAA-GCCTACTTTACTCGGATTCGAGG 756
Query 677 AGTTCCA-ACTTGACTATCCAAGTGAATACATTACAGCAGTTGAAGGCACATATGATAAA 735
|||| | | |||||||||||||||||||||| || |||||||||||||| |||||||||
Sbjct 757 AGTTTGAGA-TTGACTATCCAAGTGAATACATCACCGCAGTTGAAGGCACCTATGATAAA 815
Query 736 ATCTTTGGTAGTGA-GAC-TGAAGTCATAAATATGCTTAGGTTCAAGACTAATAAGCAAA 793
|||||||| ||||| | | | || |||||| |||||||||||||||||||||||| ||||
Sbjct 816 ATCTTTGGGAGTGATGGCCT-AA-TCATAACTATGCTTAGGTTCAAGACTAATAAACAAA 873
Query 794 CGTCTCCTCCCTTTGGAATTGAAGCTGGCACAGCCTTCGAACTCAAAGAGGAAGGTTC-C 852
||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| | |
Sbjct 874 CGTCTGCTCCCTTTGGACTTGAAGCTGGCACAGCCTTCGAACTTAAAGAGGAAGGG-CAC 932
Query 853 AAGATCGTCGGGTTCCATGGAAAAGTCAGTTCGCTGCTTCATCAGTTTGGAGTCCATGTC 912
|||||||| || ||||||||||||| |||| | ||||||||||||||||||||||||||
Sbjct 933 AAGATCGTTGGCTTCCATGGAAAAGCCAGTGAGTTGCTTCATCAGTTTGGAGTCCATGTC 992
Query 913 CTTCCAGTCACCAACTGATCA 933
| ||| ||||||||||||||
Sbjct 993 ATGCCACTCACCAACTGATCA 1013
> AT3G16420.1 | Symbols: PBP1, JAL30 | PYK10-binding protein 1
| chr3:5579386-5580953 FORWARD LENGTH=1274
Length=1274
Score = 446 bits (241), Expect = 3e-124
Identities = 396/470 (84%), Gaps = 14/470 (3%)
Strand=Plus/Plus
Query 469 ACAACTCCTTTGAATCCTGCCAAGAAACTACCAGCAGTTGGTGGTGACGAAGGAACTGCA 528
|||||||| |||| |||||||||| | ||| | ||| ||||| |||| || ||||||| |
Sbjct 534 ACAACTCCGTTGACTCCTGCCAAGCAGCTAACGGCATTTGGTAGTGATGACGGAACTGTA 593
Query 529 TGGGATGATGGTGCTTACGATGGTGTTAAGAAAGTGTATATAGGGCAAGCCCAAGATGGT 588
||||||||||||||||||| ||| |||||||| ||||| | || ||||||||||||||
Sbjct 594 TGGGATGATGGTGCTTACGTTGGGGTTAAGAAGGTGTACGTTGGACAAGCCCAAGATGGA 653
Query 589 ATATCAGCAGTAAAGTTTGTGTACGACAAGGGCGCTGCGGATATTGTAGGAGATGAGCAT 648
|| ||||| || ||||||||||||||||| || ||| ||| | |||||| || |||
Sbjct 654 ATCTCAGCTGTTAAGTTTGTGTACGACAAAAGCCCTGAGGAGGTCACAGGAGAAGAACAT 713
Query 649 GGAAATGA-TACTCTACTCGGATTTGAAGAGTTCCAACTTGACTATCCAAGTGAATACAT 707
||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 714 GGAAA-GAGTACTCTACTCGGATTCGAAGAGTTCGTACTTGACTATCCAAGTGAATACAT 772
Query 708 TACAGCAGTTGAAGGCACATATGATAAAATCTTTGGTAGTGA-GACTGAAGTCATAAATA 766
|| ||||| || ||||| ||||||||||||||||| ||||| | || |||||||| ||
Sbjct 773 CACCGCAGTCGATGGCACTTATGATAAAATCTTTGGGAGTGATGGCT-CAGTCATAACTA 831
Query 767 TGCTTAGGTTCAAGACTAATAAGCAAACGTCTCCTCCCTTTGGAATTGAAGCTGGCACAG 826
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 832 TGCTCAGGTTCAAGACTAATAAGCAAACGTCTCCTCCCTTTGGACTTGAAGCTGGCACAG 891
Query 827 CCTTCGAACTCAAAGAGGAAGGTTC-CAAGATCGTCGGGTTCCATGGAAAAGTC-A-GTT 883
||||||||||||||||||||| | ||||||||| || |||||||||| || | | |||
Sbjct 892 TCTTCGAACTCAAAGAGGAAGGC-CACAAGATCGTTGGTTTCCATGGAAGAGCCGATGTT 950
Query 884 CGCTGCTTCATCAGT-TTGGAGTCCATGTCCTTCCAGTCA-CCAACTGAT 931
| |||| || || ||||||||||||| | ||| | | |||||||||
Sbjct 951 C--TGCTCCA-CAAAATTGGAGTCCATGTTCGTCCTTT-ATCCAACTGAT 996
> AT3G16430.1 | Symbols: JAL31 | jacalin-related lectin 31 | chr3:5581663-5583187
FORWARD LENGTH=1205
Length=1205
Score = 429 bits (232), Expect = 3e-119
Identities = 389/464 (84%), Gaps = 14/464 (3%)
Strand=Plus/Plus
Query 478 TTGAATCCTGCCAAGAAACTACCAGCAGTTGGTGGTGACGAAGGAACTGCATGGGATGAT 537
|||| |||||||||| ||||| ||| ||||| |||| || ||||| ||||||||||||
Sbjct 525 TTGACTCCTGCCAAGCCGCTACCGGCACTTGGTAGTGATGATGGAACAGCATGGGATGAT 584
Query 538 GGTGCTTACGATGGTGTTAAGAAAGTGTATATAGGGCAAGCCCAAGATGGTATATCAGCA 597
|||||||||| ||| |||||||| ||||| |||| |||||||||||||||||||| ||
Sbjct 585 GGTGCTTACGTTGGGGTTAAGAAGGTGTACGTAGGACAAGCCCAAGATGGTATATCGGCT 644
Query 598 GTAAAGTTTGTGTACGACAAGGGCGCTGCGGATATTGTAGGAGATGAGCATGGAAATGA- 656
|| |||||||| |||||||| || ||| ||| | |||||| || |||||||| ||
Sbjct 645 GTTAAGTTTGTATACGACAAAAGCCCTGAGGAGGTCACAGGAGAAGAACATGGAAA-GAG 703
Query 657 TACTCTACTCGGATTTGAAGAGTTCCAACTTGACTATCCAAGTGAATACATTA-CAGCAG 715
||||||||||||||| ||||||||| |||||||||||||||||||||||| | | ||||
Sbjct 704 TACTCTACTCGGATTCGAAGAGTTCGTACTTGACTATCCAAGTGAATACATCATC-GCAG 762
Query 716 TTGAAGGCACATATGATAAAATCTTTGGTAGTGA-GACTGAAGTCATAAATATGCTTAGG 774
| |||||||| || |||||||||||||| ||||| | || |||||||| ||||||||||
Sbjct 763 TCGAAGGCACCTACGATAAAATCTTTGGGAGTGATGGCT-CAGTCATAACTATGCTTAGG 821
Query 775 TTCAAGACTAATAAGCAAACGTCTCCTCCCTTTGGAATTGAAGCTGGCACAGCCTTCGAA 834
||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||
Sbjct 822 TTCAAGACTAATAAGCAAACGTCCCCTCCCTTTGGACTTGAAGCTGGCACTGCCTTCGAA 881
Query 835 CTCAAAGAGGAAGGTTC-CAAGATCGTCGGGTTCCATGGAAAAGTCAGTTCGCT--GCTT 891
|||||||||||||| | ||| ||||| || |||||||||| || | | | ||| |||
Sbjct 882 CTCAAAGAGGAAGGC-CACAAAATCGTTGGCTTCCATGGAAGAGCC-GAT-GCTTTGCTC 938
Query 892 CATCAGT-TTGGAGTCCATGTCCTTCCAGTCACCAACTGATCAT 934
|| || ||||||| ||||||| ||| || |||||||| |||
Sbjct 939 CA-CAAAATTGGAGTTCATGTCCGTCCCGTTTCCAACTGACCAT 981
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51490000675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5