BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479102
Length=1103
Score E
Sequences producing significant alignments: (Bits) Value
AT3G16450.1 | Symbols: | Mannose-binding lectin superfamily pr... 1376 0.0
AT3G16440.1 | Symbols: ATMLP-300B, MEE36, MLP-300B | myrosinase... 913 0.0
AT3G16430.1 | Symbols: JAL31 | jacalin-related lectin 31 | chr3... 440 1e-122
AT3G16460.1 | Symbols: | Mannose-binding lectin superfamily pr... 252 6e-66
> AT3G16450.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr3:5588486-5590055 FORWARD LENGTH=1273
Length=1273
Score = 1376 bits (745), Expect = 0.0
Identities = 857/913 (94%), Gaps = 0/913 (0%)
Strand=Plus/Plus
Query 27 AGATGGCTCAAAAAGTGGAAGCAGCAGGTGGTACCGGAGGAGCTTCATGGGATGATGGTG 86
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 106 AGATGGCTCAAAAAGTGGAAGCAGGGGGTGGCGCCGGAGGAGCTTCATGGGATGATGGTG 165
Query 87 TGCACGATGGCGTTAGAAAGGTGCATGTAGGGCAAGGCCAAGATGGTGTGTCGTCTATCA 146
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 166 TCCACGATGGCGTTAGAAAGGTGCATGTAGGGCAAGGCCAAGATGGTGTGTCATCTATCA 225
Query 147 AAGTCGTGTATGCGAAGGATTCTCAGGATGTTGAAGGAGGTGAATATGGAAAGAAGACGT 206
| ||||||||||||||||| |||||||||||||||||||||||| | |||||||| ||||
Sbjct 226 ACGTCGTGTATGCGAAGGACTCTCAGGATGTTGAAGGAGGTGAACACGGAAAGAAAACGT 285
Query 207 TACTTGGATTCGAAACGTTTGAGGTTGATGCAGACGACTACATTGTAGCAGTGAAAGTGA 266
|||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 286 TACTTGGATTTGAAACGTTTGAGGTTGATGCAGACGACTACATAGTAGCAGTGCAAGTGA 345
Query 267 CCTACGACAACGTATTTGGCCAAGACTCTGACATTATCACATCTATAACCTTCACTACAT 326
||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||
Sbjct 346 CCTACGACAACGTGTTTGGCCAAGACTCTGACATCATCACATCTATTACCTTCAATACAT 405
Query 327 TCAAGGGGAAAACATCTCCACCCTATGGATTGGAAACGGAAAAGAAGTTTGTACTCAAGG 386
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 406 TCAAGGGAAAAACATCTCCACCCTATGGATTGGAAACGCAAAAGAAGTTTGTACTCAAGG 465
Query 387 ACAAAAACGGTGGCAAACCTGTTGGGTTCCATGGACGTGCTGGCGAAGCTCTACATGCTC 446
||||||||||||| |||| |||||| ||||||||||| ||||| |||||| || ||||||
Sbjct 466 ACAAAAACGGTGGTAAACTTGTTGGCTTCCATGGACGCGCTGGTGAAGCTTTATATGCTC 525
Query 447 TTGGAGCGTATTTTGCTACAACCACAACTCCTGGGACTCCTGCCAAGAAACTGTCTGCAA 506
||||||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||
Sbjct 526 TTGGAGCATATTTTGCTACAACCACAACTCCTGTGACTCCTGCCAAAAAACTATCTGCAA 585
Query 507 TTGGTGGGGATGAAGGAATTGCATGGGATGATGGTGCTTACGATGGTGTTAAGAAGGTGT 566
||||||| |||||||||| ||||||||| || ||||| ||||||||||| ||||||||||
Sbjct 586 TTGGTGGTGATGAAGGAACTGCATGGGACGACGGTGCGTACGATGGTGTCAAGAAGGTGT 645
Query 567 ACGTAGGACAAGGTCAAGATGGGATATCAGCCGTTAAGTTTGAGTACAACAAAGGCGCTG 626
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 646 ACGTAGGACAAGGCCAAGATGGGATATCAGCCGTTAAGTTTGAGTACAACAAAGGCGCGG 705
Query 627 AGGATATCGTAGGAGGTGAACATGGAAAGCGTACTTTACTCGGATTCGAGGAGTTTGAGC 686
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 706 AGAATATCGTAGGAGGTGAACATGGAAAGCCTACTTTACTCGGATTCGAGGAGTTTGAGA 765
Query 687 TAGACTATCCAAGTGAATACATCACGGCAGTTGAAGGCACCTATGATAGAATCTTTGGGA 746
| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 766 TTGACTATCCAAGTGAATACATCACCGCAGTTGAAGGCACCTATGATAAAATCTTTGGGA 825
Query 747 GTGATGGCGTAGTCATAACTATGCTTAGGTTCAAGACTAATAAACAAATGTCTGCCCCCT 806
|||||||| || |||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 826 GTGATGGCCTAATCATAACTATGCTTAGGTTCAAGACTAATAAACAAACGTCTGCTCCCT 885
Query 807 TTGGACTTGAAGCTGGCACAGCCTTCGAGCTCAAAGAGGAAGGCCACAAGATCATTGGCT 866
|||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||||
Sbjct 886 TTGGACTTGAAGCTGGCACAGCCTTCGAACTTAAAGAGGAAGGGCACAAGATCGTTGGCT 945
Query 867 TCCATGGAAAAGCCAGCGAGTTGCTTCATCAGTTTGGAGTCCATGTCATGCCAATCACCA 926
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 946 TCCATGGAAAAGCCAGTGAGTTGCTTCATCAGTTTGGAGTCCATGTCATGCCACTCACCA 1005
Query 927 ACTGACCACATTA 939
||||| |||||||
Sbjct 1006 ACTGATCACATTA 1018
Score = 191 bits (103), Expect = 1e-47
Identities = 147/167 (88%), Gaps = 7/167 (4%)
Strand=Plus/Plus
Query 939 ATGTGATCTCTTG--AATAAGTTGTTATACCTATAATGATATATTATCTTTATTTATGTT 996
||||||||||||| ||||| ||||||||||||| ||| | || | | ||| ||||||
Sbjct 1052 ATGTGATCTCTTGAAAATAACTTGTTATACCTATGATGGT-TA-T-GC-CTATCTATGTT 1107
Query 997 TAAATGTTTTTAAGCGTTCCCTTTTGTGATGTTGGTCTTTATATAATGTTTACATGTGAT 1056
||||||||||||||||||| |||||||||||||||||||||||||||||| || | ||||
Sbjct 1108 TAAATGTTTTTAAGCGTTCTCTTTTGTGATGTTGGTCTTTATATAATGTT-ACGTATGAT 1166
Query 1057 AGATTTGAATAAAAGTGGTTGATTCCATGCATATTAATTGCACATTA 1103
||||||||||||| |||||||||||||| | ||| ||||||||||||
Sbjct 1167 AGATTTGAATAAAGGTGGTTGATTCCATCCCTATAAATTGCACATTA 1213
> AT3G16440.1 | Symbols: ATMLP-300B, MEE36, MLP-300B | myrosinase-binding
protein-like protein-300B | chr3:5585944-5587750
FORWARD LENGTH=1179
Length=1179
Score = 913 bits (494), Expect = 0.0
Identities = 777/914 (85%), Gaps = 18/914 (2%)
Strand=Plus/Plus
Query 27 AGATGGCTCAAAAAGTGGAAGCAGC-AGGTGGTACCGGAGGAGCT-TCATGGGATGATGG 84
||||||||||||| ||||||||| | ||| |||| ||||||| | | ||||||||||||
Sbjct 66 AGATGGCTCAAAAGGTGGAAGCA-CAAGGAGGTATTGGAGGAGATGT-ATGGGATGATGG 123
Query 85 TG-TGCACGATGGCGTTAGAAAGGTGCATGTAGGGCAAGGCCAAGATGGTGTGTCGTCTA 143
|| | ||||| ||||||||||||||||||||||||||||||| |||||||| |||| ||
Sbjct 124 TGCT-CACGACGGCGTTAGAAAGGTGCATGTAGGGCAAGGCCTTGATGGTGTTTCGTTTA 182
Query 144 TCAAAGTCGTGTATGCGAA-GGATTCTCAGGATGTTGAAGGAGGTGAATATGGAAAGAAG 202
|||| |||||||| | ||| || ||| ||||| |||| |||||||||| |||||||||||
Sbjct 183 TCAATGTCGTGTACGAGAATGG-TTCACAGGAAGTTGTAGGAGGTGAACATGGAAAGAAG 241
Query 203 ACGTTACTTGGATTCGAAACGTTTGAGGTTGATGCAGACGACTACATTGTAGCAGTGAAA 262
| || ||||| |||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 242 TCACTAATTGGAATCGAAACGTTTGAGGTTGATGCAGACGACTACATCGTAGCAGTGCAG 301
Query 263 GTGACCTACGACAACGTATTTGGCCAAGACTCTGACATTATCACATCTATAACCTTCACT 322
|||||||| ||||| |||||||| | ||||| ||||| |||||||| ||||||||| ||
Sbjct 302 GTGACCTATGACAAAATATTTGGCTATGACTCCGACATCATCACATCCATAACCTTCTCT 361
Query 323 ACATTCAAGGGGAAAACATCTCCACCCTATGGATTGGAAACGGAAAAGAAGTTTGTACTC 382
||||||||||| ||||| || |||||||| ||||| || || ||||| ||||||||||||
Sbjct 362 ACATTCAAGGGAAAAACCTCGCCACCCTACGGATTAGATACCGAAAATAAGTTTGTACTC 421
Query 383 AAGGACAAA-AACGGTGGCAAACCTGTTGGGTTCCATGGACGTGCTGGCGAAGCTCTACA 441
||||| ||| ||||||||||||| |||||||||||||||||| ||||||||| |||| |
Sbjct 422 AAGGA-AAAGAACGGTGGCAAACTTGTTGGGTTCCATGGACGCGCTGGCGAAATTCTATA 480
Query 442 TGCTCTTGGAGCGTATTTTGCTACAACCACAACTCCTGGGACTCCTGCCAAGAAACTGTC 501
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |
Sbjct 481 TGCTCTTGGAGCGTATTTTACTACAACCACAACTCCTTTGACTCCTGCCAAGAAACTACC 540
Query 502 TGCAATTGGTGGGGATGAAGGAATTGCATGGGATGATGGTGCTTACGATGGTGTTAAGAA 561
|| ||||||| || ||||||| ||| |||||||||||||||| |||||||||||||||
Sbjct 541 GGCTGTTGGTGGTGACGAAGGAACTGCCTGGGATGATGGTGCTTTCGATGGTGTTAAGAA 600
Query 562 GGTGTACGTAGGACAAGGTCAAGATGGGATATCAGCCGTTAAGTTTGAGTACAACAAAGG 621
||||| |||| |||| |||||||| ||||| ||||| ||||||| |||| | || ||
Sbjct 601 AGTGTATATAGGGCAAGCCCAAGATGGTATATCGGCCGTGAAGTTTGTGTACGATAAGGG 660
Query 622 CGCTGAGGATATCGTAGGAGGTGAACATGGAAA-GCGTACTTTACTCGGATTCGAGGAGT 680
||| |||||||| ||||||| |||||||||||| | |||| |||||||||| || ||||
Sbjct 661 CGCCGAGGATATTGTAGGAGATGAACATGGAAATGA-TACTCTACTCGGATTTGAAGAGT 719
Query 681 TTGAGCTAGACTATCCAAGTGAATACATCACGGCAGTTGAAGGCACCTATGATAGAATCT 740
| | || ||||||||||||||||| || || |||||||||||||| ||||| | ||| |
Sbjct 720 TCCAACTTGACTATCCAAGTGAATATATTACTGCAGTTGAAGGCACATATGACAAAATAT 779
Query 741 TTGGGAGTGATGGC-GTAGTCATAACTATGCTTAGGTTCAAGACTAATAA-ACAAATGTC 798
|||| ||| | | | |||||||| ||||||||||||||| |||||||| | ||| |||
Sbjct 780 TTGGTTTTGA-GACTGAAGTCATAAATATGCTTAGGTTCAAAACTAATAAGA-AAACGTC 837
Query 799 TGCC-CCCTTTGGACTTGAAGCTGGCACAGCCTTCGAGCTCAAAGAGGAAGGCCACAAGA 857
| || ||||||||| |||||||||||||||||||||| |||||||| ||||| |||||
Sbjct 838 T-CCTCCCTTTGGAATTGAAGCTGGCACAGCCTTCGAACTCAAAGAAGAAGGTTGCAAGA 896
Query 858 TCATTGGCTTCCATGGAAAAGCCAGCGAGTTGCTTCATCAGTTTGGAGTCCATGTCATGC 917
|| | || || |||||||||| || | | ||||||||||||||||||||||| || | |
Sbjct 897 TCGTCGGGTTTCATGGAAAAGTAAGTGCGGTGCTTCATCAGTTTGGAGTCCATATCCTTC 956
Query 918 CAATCACCAACTGA 931
| |||||||||||
Sbjct 957 CTGTCACCAACTGA 970
> AT3G16430.1 | Symbols: JAL31 | jacalin-related lectin 31 | chr3:5581663-5583187
FORWARD LENGTH=1205
Length=1205
Score = 440 bits (238), Expect = 1e-122
Identities = 351/405 (87%), Gaps = 10/405 (2%)
Strand=Plus/Plus
Query 481 GACTCCTGCCAAGAAACTGTCTGCAATTGGTGGGGATGAAGGAATTGCATGGGATGATGG 540
||||||||||||| || | ||| ||||| | ||||| |||| ||||||||||||||
Sbjct 527 GACTCCTGCCAAGCCGCTACCGGCACTTGGTAGTGATGATGGAACAGCATGGGATGATGG 586
Query 541 TGCTTACGATGGTGTTAAGAAGGTGTACGTAGGACAAGGTCAAGATGGGATATCAGCCGT 600
|||||||| ||| ||||||||||||||||||||||||| |||||||| ||||| || ||
Sbjct 587 TGCTTACGTTGGGGTTAAGAAGGTGTACGTAGGACAAGCCCAAGATGGTATATCGGCTGT 646
Query 601 TAAGTTTG-AGTACAACAAAGGCGCTGAGGATATCGTAGGAGGTGAACATGGAAAGCGTA 659
|||||||| | ||| ||||| || ||||||| || ||||| |||||||||||| |||
Sbjct 647 TAAGTTTGTA-TACGACAAAAGCCCTGAGGAGGTCACAGGAGAAGAACATGGAAAGAGTA 705
Query 660 CTTTACTCGGATTCGAGGAGTTTG-AGCTAGACTATCCAAGTGAATACATCA-CGGCAGT 717
|| ||||||||||||| ||||| | | || |||||||||||||||||||||| | |||||
Sbjct 706 CTCTACTCGGATTCGAAGAGTTCGTA-CTTGACTATCCAAGTGAATACATCATC-GCAGT 763
Query 718 TGAAGGCACCTATGATAGAATCTTTGGGAGTGATGGCGT-AGTCATAACTATGCTTAGGT 776
||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||
Sbjct 764 CGAAGGCACCTACGATAAAATCTTTGGGAGTGATGGC-TCAGTCATAACTATGCTTAGGT 822
Query 777 TCAAGACTAATAAACAAATGTCTGCC-CCCTTTGGACTTGAAGCTGGCACAGCCTTCGAG 835
||||||||||||| |||| ||| || ||||||||||||||||||||||| ||||||||
Sbjct 823 TCAAGACTAATAAGCAAACGTCC-CCTCCCTTTGGACTTGAAGCTGGCACTGCCTTCGAA 881
Query 836 CTCAAAGAGGAAGGCCACAAGATCATTGGCTTCCATGGAAAAGCC 880
|||||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct 882 CTCAAAGAGGAAGGCCACAAAATCGTTGGCTTCCATGGAAGAGCC 926
> AT3G16460.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr3:5592582-5595710 FORWARD LENGTH=2415
Length=2415
Score = 252 bits (136), Expect = 6e-66
Identities = 322/409 (79%), Gaps = 23/409 (6%)
Strand=Plus/Plus
Query 529 ATGGGATGATGGTGCTTACGATGGTGTTAA-GAAGGTGTAC-GTAGGACAAGGTCAAGAT 586
||||||||||||||||| ||| |||| ||| ||| |||| | |||||||||| ||||||
Sbjct 1828 ATGGGATGATGGTGCTTTCGACGGTG-TAAGGAAAGTGT-CTGTAGGACAAGCCCAAGAT 1885
Query 587 GGGATAT-CAGCCGT-TAAGTTTGAGTACAACAAAGGC-GCTGAGGATATCGTAGGAGGT 643
|| || | ||| || | ||||| |||| ||||| || | | ||| | | | ||||
Sbjct 1886 GGTAT-TGGAGCGGTCT-CGTTTGTGTACGACAAA-GCAGGTCAGGTTGTAGAAGGAAAA 1942
Query 644 GAACATGGAAAGCGTACTTTACTCGGATTCGAGGAGTTTGAGCTAGACTATCCAAGTGAA 703
||||||||||| | || || || ||||| || ||||||||||| |||||||||||||||
Sbjct 1943 GAACATGGAAAACCCACATTGCTTGGATTTGAAGAGTTTGAGCTTGACTATCCAAGTGAA 2002
Query 704 TACATCACGGCAGTTGAAGGCACCTATGATAG-AATCTTTGGGAGTGATGGCGTAGTCAT 762
||||||||||||||||| |||||||| ||| | ||||||||||| ||| | | || |
Sbjct 2003 TACATCACGGCAGTTGATGGCACCTACGAT-GCAATCTTTGGGAATGAAC-CA-A-TCGT 2058
Query 763 AACTATGCTTAGGTTCAAGACTAATAAACAAATGTCTGCCCCCTTTGGACTTGAAGCTGG 822
|| |||||||||||||| ||||||||| | | | ||| || |||||| | | ||||||
Sbjct 2059 AAATATGCTTAGGTTCACGACTAATAAGCGAGTATCTATTCCTTTTGGAATAGGAGCTGG 2118
Query 823 CACAGCCTTCGAGCTCAAAGA-GGAAGGCCACAAGATCA-TTGGCTTCCATGGAAAAGCC 880
|||||||||||| |||| || ||| || || ||||| | |||| |||||||||| |||
Sbjct 2119 CACAGCCTTCGAATTCAA-GAAGGACGGTCAAAAGAT-AGTTGGTTTCCATGGAAGAGCT 2176
Query 881 AGCGAGT-TGCTTCATCAG-TTTGGAGTCCATGTCATGCCAATCACCAA 927
| || | | ||||| || ||||||||||||||| |||||| |||||
Sbjct 2177 GGTGA-TCTACTTCA-CAAATTTGGAGTCCATGTCGCGCCAATAACCAA 2223
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54065986965
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5