BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479116
Length=1007
Score E
Sequences producing significant alignments: (Bits) Value
AT3G16530.1 | Symbols: | Legume lectin family protein | chr3:5... 1489 0.0
AT3G15356.1 | Symbols: | Legume lectin family protein | chr3:5... 1057 0.0
AT5G03350.1 | Symbols: | Legume lectin family protein | chr5:8... 477 9e-134
> AT3G16530.1 | Symbols: | Legume lectin family protein | chr3:5624377-5625470
REVERSE LENGTH=1094
Length=1094
Score = 1489 bits (806), Expect = 0.0
Identities = 873/904 (97%), Gaps = 9/904 (1%)
Strand=Plus/Plus
Query 1 ATCATCAATCTTTCAATCacaaaaaacaacaacaacattaaaaaaaaaaaaCACTCACAC 60
||||||||||||||||||||||||||||||||| || ||||||||| || |||||
Sbjct 1 ATCATCAATCTTTCAATCACAAAAAACAACAAC-AC-----CAAAAAAAAA-ACGCACAC 53
Query 61 AATGCAGATTCACAAACTCTGTTTTCTTGTTCTGTTCTTAGCTAACGCAGCTTTTGCCGT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 54 AATGCAGATTCACAAACTCTGTTTTCTTGTTCTGTTCTTAGCTAACGCAGCTTTTGCCGT 113
Query 121 CAAATTCAACTTCAGA-TCCTTCGATGGCAACAACTTGCTATTCCTAGGAGACGCAGAGC 179
||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 114 CAAATTCAACTTC-GATTCCTTCGATGGCAGCAACTTGTTATTCCTAGGAGACGCAGAGC 172
Query 180 TTGGTCCTTCCTCTGATGGTGTAAGCCGATCCGGAGCTTTATCCATGACCCGAGACGAGA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 173 TTGGTCCTTCCTCTGATGGTGTAAGCCGATCCGGAGCTTTATCCATGACCCGAGACGAGA 232
Query 240 ACCCATTCTCTCACGGTCAAGGTCTTTACATCAATCAAATCCCATTCAAACCTTCAAACA 299
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 233 ACCCATTCTCTCATGGTCAAGGTCTTTACATCAATCAAATCCCATTCAAACCTTCAAACA 292
Query 300 CTTCTTCTCCTTTTTCATTTGAAACTTCTTTCACTTTCTCCATCACTCCTCGCACCAAAC 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 293 CTTCTTCTCCTTTTTCATTTGAAACTTCTTTCACTTTCTCCATCACTCCTCGCACCAAAC 352
Query 360 CTAACTCCGGTCAAGGTCTCGCCTTCATCATAGTCGCGGAAGCTGATAACTCCGGTGCTT 419
||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct 353 CTAACTCCGGTCAAGGTTTCGCCTTCATCATAACCCCGGAAGCTGATAACTCCGGTGCTT 412
Query 420 CGGGTGGCGGATATCTCGGAATCCTCAACAAAACCAACGATGGAAAGCCAGAGAACCACA 479
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 413 CAGATGGCGGATATCTCGGAATCCTCAACAAAACCAACGATGGAAAGCCAGAGAACCACA 472
Query 480 TCTTGGCTATCGAATTCGATACTTTCCAGAACAAAGAGTTTCTAGACATTAGTGGTAACC 539
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 473 TCTTGGCTATCGAATTCGATACTTTTCAGAACAAAGAGTTTCTAGACATTAGTGGTAACC 532
Query 540 ATGTCGGAGTTAACATCAACTCGATGACTTCTCTTGTCGCTGAGAAAGCTGGTTACTGGG 599
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 533 ATGTTGGAGTTAACATCAACTCAATGACTTCTCTTGTCGCTGAGAAAGCTGGTTACTGGG 592
Query 600 TTCAGACAAGAGTCGGTAAAAGGAAAGTTTGGTCGTTTAAAGATGTGAATCTTAGCAGTG 659
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCAGACAAGAGTCGGGAAAAGGAAAGTTTGGTCGTTTAAAGATGTGAATCTTAGCAGTG 652
Query 660 GAGAGAGGTTCAAGGCTTGGGTTGAGTTCAGAAGCAAAGACTCAACGATTACGGTTACGC 719
||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
Sbjct 653 GAGAGAGGTTCAAGGCTTGGGTTGAGTTCAGAAACAAAGACTCTACGATTACGGTTACAC 712
Query 720 TCGCGCCTGAAAACGTTAAGAAACCTAAGAGGGCTTTGATCGAAGCTCCCAGAGTGCTCA 779
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 713 TCGCGCCTGAAAACGTTAAGAAACCTAAGCGGGCTTTGATCGAAGCTCCCAGAGTGCTCA 772
Query 780 ATGAAGTTCTTCTTCAAAACATGTACGCTGGTTTTGCTGGTTCCATGGGACGTGCAGTTG 839
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 773 ATGAAGTTCTTCTTCAAAACATGTACGCCGGTTTTGCTGGTTCCATGGGACGTGCCGTTG 832
Query 840 AGCGTCACGACATTTGGAGCTGGTCGTTTGAAAACGCCGCCAAAAACAACTAAACCGGTT 899
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 833 AGCGTCACGATATTTGGAGCTGGTCGTTTGAAAACGCCGCCAAAAACAACTAAACCGGTT 892
Query 900 TGGT 903
||||
Sbjct 893 TGGT 896
> AT3G15356.1 | Symbols: | Legume lectin family protein | chr3:5174402-5175469
REVERSE LENGTH=1068
Length=1068
Score = 1057 bits (572), Expect = 0.0
Identities = 744/826 (90%), Gaps = 16/826 (2%)
Strand=Plus/Plus
Query 57 ACACAATGCAGATTCACAAACTCTGTTTTCTTGTTCTGTTCTTAGCTAACGCAGCTTTTG 116
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 47 ACACAATGCAGATTCACAAACTCTGTTTTCTTGCTCTGTTCTTAGCTAATGCAGCTTTTG 106
Query 117 CCGTCAAATTCAACTTCAGA-TCCTTCGATGGCAACAACTTGCTATTCCTAGGAGACGCA 175
||||||||||||||||| || ||||||||||||| ||||||| ||||||| ||||||||
Sbjct 107 CCGTCAAATTCAACTTC-GATTCCTTCGATGGCAGCAACTTGTTATTCCTTGGAGACGCT 165
Query 176 GAGCTTGGTCCTTCCTCTGATGGTGTAAGCCGATCCGGAGCT-TTATCCATGACCCGAGA 234
||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||
Sbjct 166 GAGCTTGGTCCTTCCTCTGATGGCGTAAGCCGATCCGGAGCTCTT-TCCATGACCCGAGA 224
Query 235 CGAGAA-CCCATTCTCTCACGGTCAAGGTCTTTACATCAATCAAATCCCATTCAAACCTT 293
||| || |||||||||||| ||||| |||||||||||||||| ||||| ||||||| |||
Sbjct 225 CGA-AACCCCATTCTCTCATGGTCAGGGTCTTTACATCAATCCAATCCAATTCAAATCTT 283
Query 294 CAAACACTTCTTCTCCTTTTTCA-TTTGAAACTTCTTTCACTTTCTCCATCACTCCTCGC 352
|||||||||||||||| |||| | ||| ||||||||||||||||||||||||||||||||
Sbjct 284 CAAACACTTCTTCTCC-TTTTGATTTTAAAACTTCTTTCACTTTCTCCATCACTCCTCGC 342
Query 353 ACCAAACCTAACTCCGGTCAAGGTCTCGCCTTCATCATAGTCGCGGAAGCTGATAACTCC 412
||||||||||| || |||||||| || |||||| |||| ||| | | ||||||||||||
Sbjct 343 ACCAAACCTAATTCTGGTCAAGGCCTTGCCTTCGTCATTGTCCCAGCCGCTGATAACTCC 402
Query 413 GGTGCTTCGGGTGGCGGATATCTCGGAATCCTCAACAAAACCAACGATGGAAAGCCAGAG 472
|| ||||| || || ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 403 GGCGCTTCCGGCGGAGGATATCTCGGAATCCTCAACAAAACCAACGATGGAAAGTCAGAA 462
Query 473 AACCACATCTTGGCTATCGAATTCGATAC-TTTCCAGAACAAAGAGTTTCT-A-GACATT 529
||| || || | |||||||||||| || ||| ||||||| ||| ||| | ||||||
Sbjct 463 AACAACCTCATATTTATCGAATTCGACACGTTT-AAGAACAATGAG--TCTAATGACATT 519
Query 530 AGTGGTAACCATGTCGGAGTTAACATCAACTCGATGACTTCTCTTGTCGCTGAGAAAGCT 589
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 520 AGTGGTAACCATGTCGGAATCAACATCAACTCGATGACTTCTCTTGTCGCTGAGAAAGCT 579
Query 590 GGTTACTGGGTTCAGACAAGAGTCGGTAAAAGGAAAGTTTGGTCGTTTAAAGATGTGAAT 649
||||| |||||||||||| |||||| ||||| |||||||||||||||||||||||||||
Sbjct 580 GGTTATTGGGTTCAGACATTAGTCGGAAAAAGAAAAGTTTGGTCGTTTAAAGATGTGAAT 639
Query 650 CTTAGCAGTGGAGAGAGGTTCAAGGCTTGGGTTGAGTTCAGAAGCAAAGACTCAACGATT 709
|||||||||||||||||||||||||||||| | |||||||||||||||||||| | || |
Sbjct 640 CTTAGCAGTGGAGAGAGGTTCAAGGCTTGGATCGAGTTCAGAAGCAAAGACTCTAGGAAT 699
Query 710 ACGGTTACGC-TCGCGCCTGAAAACGTTAAGAAACCTAAGAGGGCTTTGATCGAAGCTCC 768
|| |||| | |||| |||||||||||||||||||| |||||| |||||||| ||| | |
Sbjct 700 ACCATTAC-CATCGCCCCTGAAAACGTTAAGAAACCGAAGAGGCCTTTGATCCAAGGTTC 758
Query 769 CAGAGTGCTCAATGAAGTTCTTCTTCAAAACATGTACGCTGGTTTTGCTGGTTCCATGGG 828
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 759 GAGAGTACTCAATGATGTTCTTCTTCAAAACATGTACGCTGGTTTTGCTGGTTCCATGGG 818
Query 829 ACGTGCAGTTGAGCGTCACGACATTTGGAGCTGGTCGTTTGAAAAC 874
|||||| | |||||||||||| |||||||||||||||||||||||
Sbjct 819 ACGTGCCGGTGAGCGTCACGATGTTTGGAGCTGGTCGTTTGAAAAC 864
> AT5G03350.1 | Symbols: | Legume lectin family protein | chr5:815674-816658
REVERSE LENGTH=985
Length=985
Score = 477 bits (258), Expect = 9e-134
Identities = 674/867 (78%), Gaps = 60/867 (7%)
Strand=Plus/Plus
Query 60 CAATGCAGATTCACAAACTCTGTTTTCTTGTTCTGTTCTTAGCT-A-ACGCAGCTTTTGC 117
||||| ||||||| |||||||||||||||| |||| |||||||| | || || ||| ||
Sbjct 29 CAATGAAGATTCATAAACTCTGTTTTCTTGCTCTGCTCTTAGCTCACAC-CA-CTTCCGC 86
Query 118 CGTCAAATTCAACTTCAGATCCTTCGATGGCAACA-ACTTGCTATTCCTAGGAGACGCAG 176
|||||| ||||| ||| | || || | | || | ||| | ||||| |||||||| |
Sbjct 87 CGTCAACCTCAACCTCA-A-CC-TC-AAAACCTCAGAGTTGGTCTTCCTTGGAGACGCTG 142
Query 177 AGCTTGGTCCTTCCTCTGATGGTGTAAGCCGATCCGGAGCTTTATCCATGACCCGAGACG 236
|||| |||||| | |||||||| || ||||| ||||||||| | |||||||| |||||||
Sbjct 143 AGCTCGGTCCTGCTTCTGATGGCGTCAGCCGCTCCGGAGCTCTCTCCATGACACGAGACG 202
Query 237 AGAACCCATTCTCTCACGGTCAAGGTCTTTACATCAA-TCAAATCCCATTCAAACCTTC- 294
||||||||||||||||||| ||| |||||| || | || | |||| ||||| |||||
Sbjct 203 AGAACCCATTCTCTCACGGCCAAAGTCTTTGG-TCCACTCCAGTCCCTTTCAAGCCTTCT 261
Query 295 --AAACACTTCTTCTCCTTTTTCATTTGAAACTTCTTTCACTTTCTCCATCACTCCTCGC 352
|||| |||||||||||| | ||||||||||||||||||||||||||||| || |||||
Sbjct 262 TCAAACTCTTCTTCTCCTTATCCATTTGAAACTTCTTTCACTTTCTCCATCTCTACTCGC 321
Query 353 ACCAAACCTAACTCC-GGTCAAGGTCTCGCCTTCATCATAGTCGCGGA-AGCTGATAACT 410
| |||||| | || ||||| || || || || | | ||| | | ||| || |
Sbjct 322 ATCAAACCCGCC-CCTGGTCACGGCCTTGCTTTTGTTGTCGTCCCTTCCAT-TGA-AAGT 378
Query 411 C-CGGTGCTTCGGGTG-GC-GGATATCTCGGAATCCTCAACAAAACCAACGATGGAAAGC 467
|||| || || || ||||| ||||| || |||||||||||||| |||| || |
Sbjct 379 GACGGTCCT--GGACCCGCTGGATACCTCGGGATATTCAACAAAACCAACAATGGCAACC 436
Query 468 C-AGAGAACCACATCTTGGCTATCGAATTCGATACTTTCCAGAACAAAGAGTTTCT--AG 524
| | | ||||||||||| ||| |||||||||| ||| ||| |||||| |||| | ||
Sbjct 437 CCAAA-AACCACATCTTTGCTGTCGAATTCGACGTTTTTCAGGACAAAG-GTTT-TGGAG 493
Query 525 ACATTAGTGGTAACCATGTCGG-AGTTAACATCAACTC-GATGACTTCTC-TTGTCGCTG 581
|||||| || |||||||||||| | |||| |||||||| | | ||||| | |||| ||||
Sbjct 494 ACATTAATGATAACCATGTCGGGA-TTAATATCAACTCTGTT-ACTTC-CGTTGTTGCTG 550
Query 582 AGAAAGCTGGTTACTGGGTTCAGACAAGAGTCGGTAAAAGGAAAGTTTGGTCGTTTAAAG 641
||||||||||||| |||||||||||| || | || |||| |||| |||||||||||||
Sbjct 551 AGAAAGCTGGTTATTGGGTTCAGACAGGAATTGGGAAAATGAAACACTGGTCGTTTAAAG 610
Query 642 ATGTG-AATCTTAGCAGTGGAGAGAGGTTCAAGGCTTGGGTTGAGTTCAGAAGCAAAGAC 700
| || || || || | ||||||||||| |||||||||| |||||| | | | ||| |
Sbjct 611 A-GTTCAAGCTGAGTAATGGAGAGAGGTACAAGGCTTGGATTGAGT--ATA-G-AAA--C 663
Query 701 TC-AACGATTACGGTTACGCTCGCGCCTGAAAACGTTAAGAAACCTAAGAGGGCTTTGAT 759
|| || | |||| ||||| |||||||| |||| ||||||||||||||||| | |||||||
Sbjct 664 TCCAAGG-TTACAGTTACTCTCGCGCCAGAAACCGTTAAGAAACCTAAGAAGCCTTTGAT 722
Query 760 CGAAGCTCCC---AGAGTGCTCAATGAAG-TTCTTCTTCAAAACATGTACGCTGGTTTTG 815
|| || || ||| | ||| | ||| || |||||||||| |||||| | ||||||
Sbjct 723 CGTTGC-CCATTTAGA-T-CTCTCT-AAGGTTTTTCTTCAAAATATGTACCCCGGTTTTT 778
Query 816 CTGGTTCCATGGGACGTG-CAGTTGAGCGTCACGACATTTGGAGCTGGTCGTTTGAAAAC 874
||||| ||||||| |||| | ||||| ||||| ||||||||||| ||| | || | |||
Sbjct 779 CTGGTGCCATGGGCCGTGGC-GTTGAACGTCATGACATTTGGAGTTGGACCTTCCAGAAC 837
Query 875 -GCCGCCAAAAACAA-CTAAACCGGTT 899
| ||||| | || |||||||||||
Sbjct 838 AGT-GCCAAGAG-AATCTAAACCGGTT 862
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49329932354
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5