BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479118
Length=1503
Score E
Sequences producing significant alignments: (Bits) Value
AT3G16550.1 | Symbols: DEGP12 | DEGP protease 12 | chr3:5629920... 2226 0.0
AT3G16540.1 | Symbols: DegP11 | DegP protease 11 | chr3:5626290... 857 0.0
AT1G65640.1 | Symbols: DegP4 | DegP protease 4 | chr1:24410851-... 339 6e-92
> AT3G16550.1 | Symbols: DEGP12 | DEGP protease 12 | chr3:5629920-5632417
REVERSE LENGTH=1476
Length=1476
Score = 2226 bits (1205), Expect = 0.0
Identities = 1415/1506 (94%), Gaps = 56/1506 (4%)
Strand=Plus/Plus
Query 1 ATGGTGTCCCGGTACTCGAGAGCTCTACTCCCGACGGTAACAATCTCTAGCCGGATCGCT 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1 ATGGTGTCCCGGTACTCGAGAGCTCTACTCCCGACGATAACAATCTCTAGCCGGATCGCT 60
Query 61 AATATTGTTCTTCCGTTTGCATTAACTCGCGGAAGAAAGATCCATACCATGTCGAAGGAT 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ACTATTGTTCTTCCGTTTGCATTAACTCGCGGAAGAAAGATCCATACCATGTCGAAGGAT 120
Query 121 GAGGAATGGTGGAAGAAAAT-AGAAAAAAGTCCTCCCGTTGATGAATTGATGCTGGAGTC 179
|||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||
Sbjct 121 GAGGAATGGTGGAAGAAAATAAG-AAAAAGTCCTCCCGTTGATGAATTGATGTTGGAGTC 179
Query 180 GGTGGTAGAGGTCTTCACTGACTCTACCGAGTATAGCAAAGTCAAACCTTGGCAGACTCT 239
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 180 GGTGGTAGAGGTCTTCACTGACTCTACCAAGTATAGCAAAGTCAAACCTTGGCAGACTCT 239
Query 240 TAACCAAGAATCATATGGGGGCTCTGGATTTGCAATCGCGGGAAAGAAAATTCTTACGAA 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TAACCAAGAATCATATGGGGGCTCTGGATTTGCAATCGCGGGAAAGAAAATTCTTACGAA 299
Query 300 CGCTCATGTGGTGGAGGGGATGAATGATCACACATTCGTGCACGTGAAAAGACATGGCTC 359
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 300 CGCTCATGTGGTGGAGGGGATGAATGATCACATATTCGTGCACGTCAAAAGACATGGCTC 359
Query 360 TCAAGTCAAATACAAAGCAAAAGTTCAAAAGATTGCACATGAGTGTGATTTGGCCATCTT 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TCAAGTCAAATACAAAGCAAAAGTTCAAAAGATTGCACATGAGTGTGATTTGGCCATCTT 419
Query 420 GGAGATCGATAGCGACGAGTTTTGGAAGGGTATGAATCCCTTGGAGTTCGGAGACATACC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GGAGATCGATAGCGACGAGTTTTGGAAGGGTATGAATCCCTTGGAGTTCGGAGACATACC 479
Query 480 GCCTCTCAATGAAATTGTATATGTTGTTGGTTATCCAGAAGCTGGTGAAACAATATGCGT 539
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 480 GCCTCTCAATGAAATTGTATATGTTGTTGGTTATCCAAAAGCTGGTGAAACAATATGCGT 539
Query 540 TACAAAAGGTGTTGTAACTGGAGTTAAAACTGGAAATTACCTTCAAAGTTCCACTAAACT 599
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 540 TACAAAAGGTGTTGTAACTGGAGTTAAAACTGGAAATTACCTTCGAAGTTCCACTAAACT 599
Query 600 ACTGACAATACAAATTGACGCAACTACCAACGATGGAAATAGTGGTGGCCCGGTTATTAC 659
|||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 600 ACTGACAATACATATTGACGCAACTACCTACGGTGGAAATAGTGGTGGCCCGGTTATTAC 659
Query 660 AGGAAACAAAGTCGTTGGTGTAGTATTTCAAGA-TCTTGGAGATGAGAAAAGTACAGGTG 718
|||| |||||||| |||||||| |||||||| | |||||||||| |||||||||||||||
Sbjct 660 AGGAGACAAAGTCCTTGGTGTACTATTTCAA-ATTCTTGGAGATAAGAAAAGTACAGGTG 718
Query 719 TCGTAATCCCAACCCCAATAATTAGACATTTCATAACTGGTGCAGAAGAAAGCTCCCATA 778
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 719 TTGTAATCCCAACCCCAATAATTAGACATTTCATAACTGGTGCAGAAGAAAGCTCCCACA 778
Query 779 ACGCTGTTTTCGGCTCACTAGTTCTATCATGTCAGTCAATGGAAAATGCTCAAATTCGTA 838
|||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 779 ACGCTGTTTTTGGCTCACTAGTTTTATCATGTCAGTCAATGAAAAATGCTCAAATTCGTA 838
Query 839 ATCATTTTAAGATGAGCCCTGAAACGACAGGAATTCTTATAAACAAAATAAACTCATCGT 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 ATCATTTTAAGATGAGCCCTGAAACGACAGGAATTCTTATAAACAAAATAAACTCATCGT 898
Query 899 CGGGGGCTCACAAAATTCTGAGAAAAGATGACATCATTCTCGCAATTGATGGTGTTCCAA 958
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 CGGGGGCTCACAAAATTCTGAGAAAAGATGACATCATTCTCGCAATTGATGGTGTTCCA- 957
Query 959 TAGGAAATGATGAAACATGTCCTTTTCGAAATGAGGAACGAATAAGTTTCAATCATTTTA 1018
| | | | ||| ||||||||| | ||||||||||||||||||||||
Sbjct 958 --G----T-------C----C-TTTCCGAAATGAG-A-CGAATAAGTTTCAATCATTTTA 997
Query 1019 TTTCTATGAAGAAACCAGATGAAAAAATCTTAGTAAAGGTTCTAAGGAAGGGAAAAGAGC 1078
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 998 TTTCTATGAAGAAACCAGATGAAAATATCTTAGTAAAGGTTCTAAGGAAGGGGAAAGAGC 1057
Query 1079 ATGAATACAATATCAGTTTAAAGCCGGTAAGTGAAACCACACATGCAAGTGCAACAATAT 1138
|||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||
Sbjct 1058 ATGAGTACAATATCAGTTTAAAGCCGGT--G--AAACCACACATTCAAGTGCAACAATAT 1113
Query 1139 TATATAACCTTCCAAGTTATTACATATTCGGTGGTTTTGTTTTTGTGCCTCTCACTAAAT 1198
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1114 TATA-A-CCTTCCAAGTTATTACATATTCGGTGGTTTTGTTTTTGTGCCTCTCACTAAAT 1171
Query 1199 CGTACATTGATGATTTGAGCTTAGAATGTGTATTAAATGATGAGTACAAAATTACCGATG 1258
|||||||||||||| | || | | || | | | | |||||||||
Sbjct 1172 CGTACATTGATGAT---A----AG--T----ACTACA--A--A--A-----TTACCGATG 1207
Query 1259 AACAACAAGTCATAATCTCTCAGGTAATGCCAGATGACATTAACAAAGGATACAGTAATT 1318
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1208 AACAACATGTCATAATCTCTCAGGTAATGCCAGATGACATTAACAAAGGATACAGTAATT 1267
Query 1319 TCAAAGATTTACAGGTGGAAAAAGTAAACGGAGTGAAAGTAAAGAATTTAAAACACTTAC 1378
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1268 TCAAAGATTTACAGGTGGAAAAAGTAAACGGAGTGAAAGTAAAGAATTTGAAACACTTAC 1327
Query 1379 GTGAACTGATAGAGGGATGTTGTGGCAAAGATCTGAGGTTGGACTTGGAAAATGACAAAG 1438
||||||| ||||||||||||| | |||||||||||||| |||||||||| ||||||||||
Sbjct 1328 GTGAACTAATAGAGGGATGTTTTAGCAAAGATCTGAGGCTGGACTTGGAGAATGACAAAG 1387
Query 1439 TTATGGTACTCAACTATGAATCTGCTAAAAAGGCAA-ATTTGAGATCTTGGAACGTCACA 1497
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1388 TGATGGTACTCAACTATGAATCTGCTAAAAAGGCAACATTTGAGATCTTGGAACGTCACA 1447
Query 1498 ATATAA 1503
||||||
Sbjct 1448 ATATAA 1453
> AT3G16540.1 | Symbols: DegP11 | DegP protease 11 | chr3:5626290-5628857
REVERSE LENGTH=1668
Length=1668
Score = 857 bits (464), Expect = 0.0
Identities = 941/1158 (81%), Gaps = 86/1158 (7%)
Strand=Plus/Plus
Query 68 TTCTTCCGTTTGCATTAACTCGCGGAAGAAAGATCCA-T--A-CCATGTCGAAG-GATG- 121
||||||| ||||| |||||| || ||||||| ||||| | | |||| || | || |
Sbjct 203 TTCTTCCATTTGCGTTAACTTGCCGAAGAAATATCCACTCAATACATGAAGATGAGAAGA 262
Query 122 AG---GAATGGTGGAAGAAAATAGAAAAAAGTCCTCC-CGTTGATGAATTGATGCTGGAG 177
|| ||| ||||||||||||||||| |||||| ||| | ||||||||||| |||||||
Sbjct 263 AGCTAGAACGGTGGAAGAAAATAGAAGAAAGTCATCCTC-TTGATGAATTGGTGCTGGAT 321
Query 178 TCGGTGGTAGAGGTCTTCACTGACTCTACCGAGTATAGCAAAGT-CAAACCTTGGCAGAC 236
||||| ||| |||| ||| || |||||||||||||||||||| | |||||||||| ||||
Sbjct 322 TCGGTTGTAAAGGTATTCTCTAACTCTACCGAGTATAGCAAA-TCCAAACCTTGGAAGAC 380
Query 237 TCTTAACCAAGAATCATATGGGGGCTCTGGATTTGCAATCGCGGGAAAGAAAATTCTTAC 296
|||| ||||| |||||| ||||| |||||||||||||||| |||| ||||||||||||
Sbjct 381 TCTTGACCAAAAATCATCCAGGGGCACTGGATTTGCAATCGCCGGAAGGAAAATTCTTAC 440
Query 297 GAACGCTCATGTGGTGGA-GGGGATGAATGATCACACATTCGTGCACGTGAAAAGACATG 355
||||||||||||||| || || ||||||||||||||||||||| |||| ||||||||||
Sbjct 441 GAACGCTCATGTGGT-GATGGCTATGAATGATCACACATTCGTGGACGTCAAAAGACATG 499
Query 356 GCTCTCAAGTCAAATACAAAGCAAAAGTTCAAAAGATTGCACATGAGTGTGATTTGGCCA 415
|||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct 500 GCTCTCAAATCAAATACAAAGCAAAAGTTCAAAAGATTTCACATGAATGTGATTTGGCCA 559
Query 416 TCTTGGAGATCGATAGCGACGAGTTTTGGAAGGGTATGAATCCCTTGGAG-TTCGGAGAC 474
|||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||
Sbjct 560 TCTTGGAGATCGATAGTGACGAGTTTTGGAAGGGTATGAATCCCTTGGAGCTT-GGAGAC 618
Query 475 ATACCGCCTCTC-AATGAAATTGTATATGTTGTTGGTTATCCAGAAGCTGGTGAAACAAT 533
||||| |||||| || ||| |||| | ||||||||| | | || ||| | |
Sbjct 619 ATACCACCTCTCCAA-GAAGTTGTGTCCGTTGTTGGT------G--G-TGA--AAATA-T 665
Query 534 ATGCGTTACAAAAGGTGTTGTAACTG-GAGTTAAAACTGGAA-ATTACC-TTCAAAGTTC 590
||| ||||||||||| | ||| || ||||| ||||| ||| || || || | |||
Sbjct 666 CTGCATTACAAAAGGTCTAGTA-CTTAGAGTTGAAACTAGAATAT-ACGATT-ACAGTGA 722
Query 591 CACTAAACTACTGA-CAATACAAATTGACGCAACTACCAACGATGGAAATAGTGGTGGCC 649
|| | | || || | ||||||| ||||| ||||||| |||||||| ||||||||||||||
Sbjct 723 CAGTGATCTGCT-ATCAATACAGATTGATGCAACTATCAACGATGAAAATAGTGGTGGCC 781
Query 650 CGGTTATTACAGGAAACAAAGTCGTTGGTGTAGTATTTCAAGATCTTGGAGATGAGAAAA 709
|||| |||| |||||||||||||||||||| |||| | || | || ||
Sbjct 782 CGGTGATTATGGGAAACAAAGTCGTTGGTGTGGTATAT---GA------A-AT-AG---- 826
Query 710 GTACAGGTGTCGTAATCCCAACCCCAATAATTA-GACATTTCATAACTGGTGCAGAAGAA 768
|| ||| | | ||||||| |||||||||| | |||||||||||| ||| ||||
Sbjct 827 GTTT---TGT-G-A-TCCCAACTCCAATAATTAAG-CATTTCATAACTAGTGTTCAAGAG 879
Query 769 AGCTCCCA-TAACGCT-GTTTTCGGCTCACTAGTTCTATCATGTCAGTCAATGGAAAATG 826
||| || || || |||| ||||||| | | ||| |||| ||| || | |||||||
Sbjct 880 AGCAGACAATATT-CTTGTTT-CGGCTCATTGGATCTTTCATATCAATCTCTCGAAAATG 937
Query 827 CTCAAATTCGTAATCATTTTAAGATGAGCCCTGAAACGACAGGAATTCTTATAAACAAAA 886
|||||| ||||||||||| |||||||||| ||||| ||||||||||||||| |||||||
Sbjct 938 TTCAAATCCGTAATCATTTCAAGATGAGCCATGAAATGACAGGAATTCTTATTAACAAAA 997
Query 887 TAAACTCATCGTCGGGGGCTCACAAAATTCTGAGAAAAGATGACATCATTCTCGCAATTG 946
||||||| |||||||||||| |||||||| |||||||||| ||||| ||||| |||||||
Sbjct 998 TAAACTCGTCGTCGGGGGCTTACAAAATTTTGAGAAAAGACGACATTATTCTTGCAATTG 1057
Query 947 ATGGTGTTCCAATAGGAAATGATGA-AACATGT-CCTTTTCGAAATGAG-GAACGAATA- 1002
||||||||||||||||||||||||| || | || ||||| | ||| | || || |||
Sbjct 1058 ATGGTGTTCCAATAGGAAATGATGAGAA-A-GTTCCTTTCCAAAACAAAAGA-CGGATAG 1114
Query 1003 AGTTTCAA-TCATTTTATTTCTATGAAGAAACCAGATGAAAAAATCTTAGT-AAAGGTTC 1060
| ||||| | | || |||||||||||||||||| ||||||| |||||| |||| ||
Sbjct 1115 A-TTTCAGCT-ACTTGGTTTCTATGAAGAAACCAGGTGAAAAAGCCTTAGTTAAAGTTT- 1171
Query 1061 TAAGGAAGGGAAAAGAGCATGAATACAATATCAGTTTAAAGCCGGTAAGTGAAACCACAC 1120
|| | || ||||||||| |||| |||||||||||| |||| ||||| | |||||| ||
Sbjct 1172 TACGAAACGGAAAAGAGTATGAGTACAATATCAGTCTAAAACCGGT--G--AAACCAAAC 1227
Query 1121 ATG-CAAGTGCAACAATATTATATAACCTTCCAAGTTATTACATATTCGGTGGTTTTGTT 1179
| || |||||||||| || ||||| |||||||||| |||||||| || |||||||||
Sbjct 1228 TTTACA-GTGCAACAAT-TT-TATAATGTTCCAAGTTACTACATATTTGGGGGTTTTGTT 1284
Query 1180 TTTGTGCCTCTCACTAAA 1197
||||||||||||||||||
Sbjct 1285 TTTGTGCCTCTCACTAAA 1302
Score = 137 bits (74), Expect = 2e-31
Identities = 175/222 (79%), Gaps = 13/222 (6%)
Strand=Plus/Plus
Query 1289 CAGATGACATTAACAAAGGATA-CAGTAA-TTTCA-AAGAT-TTACAGGTGGAAAAAGTA 1344
|||||||||| ||| ||||||| || || ||| | | | | | |||||||| |||||
Sbjct 1337 CAGATGACATCAACGAAGGATACCA--AAGTTT-ATATGGTGCT-CAGGTGGAGAAAGTG 1392
Query 1345 AACGGAGTGAAAGTAAAGAAT-TTAAAACACT-TACGTGAACTGATAGAGGGATGTTGTG 1402
||||||||| ||||||||||| || || || | || | || || ||||||| |||| |
Sbjct 1393 AACGGAGTGGAAGTAAAGAATCTT-AAGCA-TCTATGCGAGCTAATAGAGGAATGTAGCA 1450
Query 1403 GCAAAGATCTGAGGTTGGACTTGGAAAATGACAAAGTTATGGTACTCAACTATGAATCTG 1462
| ||||| ||||| |||| || ||||| | || ||| |||| ||||||||||||||||
Sbjct 1451 CCGAAGATTTGAGGCTGGAGTTTAAAAATCATAAGGTTTTGGTCCTCAACTATGAATCTG 1510
Query 1463 CTAAAAAGGCAAATTTG-AGATCTTGGAACGTCACAATATAA 1503
|||||||||||| || | ||||||||||||||||| ||||
Sbjct 1511 CTAAAAAGGCAACGTTACAAATCTTGGAACGTCACAAAATAA 1552
> AT1G65640.1 | Symbols: DegP4 | DegP protease 4 | chr1:24410851-24413527
REVERSE LENGTH=1572
Length=1572
Score = 339 bits (183), Expect = 6e-92
Identities = 921/1262 (73%), Gaps = 111/1262 (9%)
Strand=Plus/Plus
Query 259 GGCTCTGGATTTGCAATCGCGGGAAAGAAA-ATTCTTACGAACGCTCATGTGGTGGAGGG 317
||||||||||||| |||| ||||||| ||| ||||||||||||||||| | || |
Sbjct 301 GGCTCTGGATTTGTAATCTCGGGAAA-AAAGATTCTTACGAACGCTCA--T-GT--A--- 351
Query 318 GATGAATGATCACACATTCGTGCACGTGA-AAAGACATGGCTC-TCAAGTC-AAATACAA 374
| || |||||||| ||| |||| || | ||| ||||||||| | | | ||||||||
Sbjct 352 GTTG-CTGATCACATATTTTTGCAAGTTAGAAA-ACATGGCTCACCCA--CAAAATACAA 407
Query 375 AGCAAAAGTTCAAAAGATTGCACATGAGTGTGATTTGGCCATCTTGGAGATCGATAGCGA 434
|||| |||||| | ||||| |||||| |||||||||||||| ||||||||||||| ||
Sbjct 408 AGCACAAGTTCGAGCGATTGGACATGAATGTGATTTGGCCATTTTGGAGATCGATAATGA 467
Query 435 CGAGTTTTGGAAGGGTATGAAT-CCCTTGGAGTTCGGAGACATACCGCCTCTCAATGAAA 493
||||||||| ||| |||| || || ||||| ||||||| ||||| |||| ||| ||
Sbjct 468 AGAGTTTTGGGAGGATATG-ATACCTTTGGAACTCGGAGAGATACCATCTCTGGATG-AA 525
Query 494 T-TGTATATGT-TGTTGGTTATCCAGA-AGCTGGTGA-AACAATATGC-GTTACAAAAGG 548
| ||| || | |||| ||||| | | |||||| | | | | | |||| |||||
Sbjct 526 TCTGTGGCCGTAT-TTGGCTATCC-TACTGGTGGTGATAGC-GT-TTCTATTACTAAAGG 581
Query 549 TGT-TGTAACTG-GAGT-TAA-A-ACTGGAAATTACCTTCAAAGTTCCACTAAACTACT- 602
| | ||| | | |||| || | || || | | | ||| | ||||| ||||||
Sbjct 582 T-TATGTTTC-GAGAGTCGAATATACAAGATA-T-GC-TCACGGAGGCACTACACTACTC 636
Query 603 GACAATACAAATTGACGCAACTACCAACGATGGAAATAGTGGTGGCCCGGTTATTACAGG 662
| | ||||||| || || ||| ||| ||||||||||||||| || | || | |||
Sbjct 637 G-CTATACAAACAGATGCGGCTATAAACCCTGGAAATAGTGGTGGTCCAGCAATCATAGG 695
Query 663 AAACAAAGTCGTTGGTGTAG-TATTTCAAGATCTTGGAGATG-AGAAAAGTACAGGTGT- 719
||| ||| | | ||||||| | |||||| | | | || ||| || || ||| |
Sbjct 696 AAATAAAATGGCAGGTGTAGCT-TTTCAAAAAGATCCATCTGCAGATAA-TATAGG-ATA 752
Query 720 CGTAATCCCAACCCCAATAATTAGACATTTCATAACTGGTGCAGAAG-AAA-GCTCCCAT 777
| ||||||| || ||| |||| | |||||| |||||| || |||| ||| | | ||
Sbjct 753 CATAATCCCGACTCCAGTAATAAAACATTTTTTAACTGCTGTTGAAGAAAATG-GACAAT 811
Query 778 AACGCTGTTTTCGGCTCACTAGTTC-TATCATGTC-AGTCAATGGAAAATGCTCAAATTC 835
| | || |||| || | ||| | | || | || | | ||||| ||| ||||| | |
Sbjct 812 -ATGGTGGTTTCTGCACGTTAG-ACATTTCCTATCAACT-TATGGAGAATTCTCAACTCC 868
Query 836 GTAATCATTTTAAGATGAGCCCTGAAACGACAGGAATTCTTATAAACAAAATAAACTCAT 895
||||||| ||||||||| | ||||||| |||||| |||||||||||| |||||||| | |
Sbjct 869 GTAATCACTTTAAGATGGGTCCTGAAATGACAGGGATTCTTATAAACGAAATAAAC-CCT 927
Query 896 C-GTCGGGGGCTCACAAAA-TTCTGAGAAAAGATGACATCATTCTCGCAATTGATGGTGT 953
| ||||| ||| |||||| | | ||||||||||||||||||||||||||||||| |||
Sbjct 928 CTGTCGGATGCTTACAAAAGGT-TAAGAAAAGATGACATCATTCTCGCAATTGATGATGT 986
Query 954 TCCAATAGGAAATGATGA-AACATGTC-CTTTTCGAAATGAGGAACGAAT-AAGTTTCAA 1010
|| ||||||||||||| || | || ||||||| ||| |||||||||| || ||||||
Sbjct 987 TCTTATAGGAAATGATGCTAA-A-GTTACTTTTCGGAATAAGGAACGAATCAA-TTTCAA 1043
Query 1011 TCATTTTATTTCTATGAAGAAACCAGATGAAAAAATCTTAGTA-AAGGTTCTAAG-GAAG 1068
||||||| |||| ||||||||| |||||||| | | ||| | ||| || | || || |
Sbjct 1044 TCATTTTGTTTCGATGAAGAAATTAGATGAAACAGTTTTACTTCAAGTTT-TGAGAGATG 1102
Query 1069 GGAAAAGAGCATGAATACAATATCA-GTTTAAAGCCGGTAAGTGAAACCACACATG--CA 1125
||||| |||||||| | | | || | | | ||| ||| | | | || | | || |
Sbjct 1103 GGAAA-GAGCATGAGTTCCACATTATGGTAAAACCCG-T--GCCA--CC-C-CTTGTTCC 1154
Query 1126 AGTGCAACAATATTATATAACCTTCCAAGTTATTACATATTCGGTGGTTTTGTTTTTGTG 1185
|| ||| || ||| ||| | | |||||||||||||||| |||| || |||||||||||
Sbjct 1155 AGGGCATCAGTATGATA-AGC-TTCCAAGTTATTACATCTTCGCAGGCTTTGTTTTTGTA 1212
Query 1186 CCTCTCACTAAATCG-TACATTGAT-G-A-TTTGAGCTTAG-AAT-GTGTA-TTAAATG- 1237
||||| || | | | |||||||| | | ||||| || | ||| ||| | ||||||
Sbjct 1213 CCTCTTAC-ACAGCCATACATTGACAGTACTTTGAT-TT-GCAATTGTGCAATTAAATAT 1269
Query 1238 ATGAGTACAAAATTACCGATGAACAACAAGTCATAATCTCTCAGGTAAT-GCCAGATGAC 1296
||| | |||| | | |||||| | |||||||| ||| |||| | || || |||
Sbjct 1270 ATGCCTG-AAAAGG-CTGGTGAACAGCTTGTCATAATTTCTTAGGTGTTAGCT-GACGAC 1326
Query 1297 ATTAACAAAGGATACAGTAATTTCAAAGA-TTT-ACAGGTGGA-AAAAGTAAACGGAGTG 1353
|| || |||||||| | ||||||| || ||| | |||| | |||||| || |||||
Sbjct 1327 ATCAATGCAGGATACACTGATTTCAA-GAATTTGA-AGGTA-ATAAAAGTGAATGGAGTT 1383
Query 1354 AAAGTA-AAGAATTTAAAACA-CTTACGTGAACTGATAGAGGGATGTTGTGGCAAAG-AT 1410
|||| || ||| ||||||| || || |||| || ||||| ||| || | | || ||
Sbjct 1384 CAAGTGGAA-AATCTAAAACATCTAAC-TGAATTGGTAGAGACATGCTG-GACCGAGGAT 1440
Query 1411 CTGAGGTTGGACTTGGAAAATGACAAAGTTATGGTACTCAACTATG-AATCTGCTAAA-A 1468
| || ||||||| ||||| || || ||| |||| |||||||||| || ||||||| |
Sbjct 1441 TTAAGACTGGACTTAGAAAACGAGAAGGTTGTGGTCCTCAACTATGCAAA-TGCTAAAGA 1499
Query 1469 AG 1470
||
Sbjct 1500 AG 1501
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74146204965
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5