BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479142
Length=1369
Score E
Sequences producing significant alignments: (Bits) Value
AT3G16740.1 | Symbols: | F-box and associated interaction doma... 1784 0.0
AT2G18780.1 | Symbols: | F-box and associated interaction doma... 468 7e-131
AT3G18120.1 | Symbols: | F-box associated ubiquitination effec... 255 6e-67
AT3G19560.1 | Symbols: | F-box family protein | chr3:6793311-6... 122 6e-27
AT1G25150.1 | Symbols: | F-box family protein | chr1:8821008-8... 104 2e-21
AT1G25055.1 | Symbols: | F-box family protein | chr1:8806607-8... 104 2e-21
AT1G24881.1 | Symbols: | F-box family protein | chr1:8784036-8... 104 2e-21
AT1G25211.1 | Symbols: | F-box family protein | chr1:8835386-8... 104 2e-21
AT1G24800.1 | Symbols: | F-box family protein | chr1:8769660-8... 104 2e-21
AT3G16020.1 | Symbols: | F-box associated ubiquitination effec... 91.6 2e-17
> AT3G16740.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:5699333-5700826 FORWARD LENGTH=1494
Length=1494
Score = 1784 bits (966), Expect = 0.0
Identities = 1175/1276 (92%), Gaps = 14/1276 (1%)
Strand=Plus/Plus
Query 47 ATTAGAGATTCGATTCGAAACAATGACTAAGATTTCGGATCTTCCACGGGATTTGACAGA 106
|||| |||||||||||||||| ||| | ||||||| |||||||||||||||||||||||
Sbjct 122 ATTACAGATTCGATTCGAAACTATGGTTCAGATTTCCGATCTTCCACGGGATTTGACAGA 181
Query 107 GGAGGTGCTCTCTAGGCTTCCGGTGACATCTATGAGAGCAGTGCGATTTACTTGCAAAAA 166
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 182 GGAGGTGCTCTCTAGGATTCCGGTGACATCTATGAGAGCAGTGAGATTTACTTGCAAAAA 241
Query 167 TTGGAATAGTTTATCGAAAGATCGGAGCTTTAGAAAGAAGCACCTGCGTGGAGCAATATC 226
||||| | |||||||||||||||||||||| ||||||||||||||||||||||| | |
Sbjct 242 GTGGAACACCTTATCGAAAGATCGGAGCTTTACAAAGAAGCACCTGCGTGGAGCAAGAGC 301
Query 227 AGCAGCGAAGAAGAAGCAGACGAAGGAGTTTCAGGTGATCATGATGATTCAATATAGGGT 286
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 302 AGCAGCAAAGAAGAAGCAGACGAAGGAGTTTCAGGTGATCATGATGATTCAATTTAGGGT 361
Query 287 TTATTTATTCAGCGTCAATCTCCTCAATCCATCTATAGAGCGTATAGGTAAACTTATTAG 346
|||||||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 362 TTATTTATACAGCGTCAACCTCCTTAATCCATCAATAGAGCGTATAGGTAAACTTATTAG 421
Query 347 CCTAGACGTTGAAGATCGTGTCGATATATCTAAAATCTTTCACTGCCACGGTTTATTGTT 406
||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 422 CCTAGACGTTGAAGATCATGTCGACATATCTAAAATCTTTCACTGCGGCGGTTTATTGTT 481
Query 407 ATGCATCACCAAAGACATATCTAGGCTTGTGGTTTGGAACCCTTACTCTGGGCAAACTAG 466
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 482 ATGTATCACCAAAGACATATCTAGGCTTGTGGTTTGGAACCCTTATTCTGGGCAAACAAG 541
Query 467 GTGGATCCAACCTAGAAATTCTTACCACAGATTGGACAGGTACGCTTTAGGATATGAAGA 526
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 542 GTGGATCAAACCTAGAAATTCTTACCACAGATTGGACAGGTACGCTTTAGGATACGAAGA 601
Query 527 GAAGAACAATTCATGTCGTAGCTACAAAATCTTGAGATTTATGGATAATTACCAGGGCGA 586
||||||||| || |||||| |||||||||||||||||||||||||| ||||| ||| ||
Sbjct 602 GAAGAACAAGTCGTGTCGTTGCTACAAAATCTTGAGATTTATGGATGATTACGAGGATGA 661
Query 587 CAACCCACCGTACCTAGTTCGTGAGTTTGAAATCTACGACTTAAACTCTGATTCATGGAA 646
|| ||| | |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 662 CAGGGCACTGCGCCTAATTCGTGAGTTTGAAATCTACGACTTAAACTCTGATTCATGGAA 721
Query 647 GGTTGTTGATGTCCCTCCTGACTGGGAAATAGAGTATTATCACCGTGGCTTGTCTCTCAA 706
||||||| ||||| |||| |||||||| |||||| ||||||||||||| ||||||||||
Sbjct 722 GGTTGTTAATGTCACTCCCGACTGGGATGTAGAGTTTTATCACCGTGGCCTGTCTCTCAA 781
Query 707 GGGGAATACTTACTGGTTTGCTCAAGAGAAGCTTCCAATATTCCCACTCGGAAGAGTGGT 766
||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| |
Sbjct 782 GGGGAATACTTACTGGTTTGCTCAAGAGAAGCTTCCACCATTACCACGCGGAAGAGTGAT 841
Query 767 A----T--CAGATATGGCTGATTTCTTACTCTGTTTTGATTTTACAAGGGAGAGGTTTGG 820
| | |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 842 AACAATATCAGATATGGCTGATTTCTTACTCTGTTTTGATTTTACAAGGGAGAGATTTGG 901
Query 821 ACCGCGTCTGCCTCTGCCTTTTCACTCTTTTGTTGAAGATACTGTGACTCTATCTAGTGT 880
|||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 902 ACCGCGCCTGCCTCTGCCTTTCCACTCTTTTGTTGAAGATACTGTGACTCTATCCAGTGT 961
Query 881 TAGAGATAAGCAACTTGCAGTGTTATTTCAGCCATGTTA-TGCATCTACCGTGAAGATAT 939
|||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 962 TAGAGATAAGAAACTTGCAGTGTTATTTCAGCCATGT-AGTGCATCTACCGTGAAGATAT 1020
Query 940 GGATTAGTAGCAAGATTGAGCCCAATGCAGTGTCGTGGAGGAAGGTTTTCTTAGCGGTTG 999
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 GGATTAGTCGCAAGATTGAGCCCAATGCAGTGTCGTGGAGGAAGGTTTTCTTAGCGGTTG 1080
Query 1000 ATATGAAACCACTCACTGGTTTTCAGTTTGACATTAACTCTGGGAGTTTCTTTGTTGACC 1059
|||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 1081 ATATGAAATCACTCACTGGTTTTCAGTTTGACATTAACGCTGCAAGTTTCTTTGTTGACG 1140
Query 1060 AGAAGAAAAAGGTCGCCATGGTTCTTGATAAAGACAGATTCAGATCTAAATTAACTCGCA 1119
||||||||||||||||||||||||| ||||||||||| ||||| | |||||| |||||||
Sbjct 1141 AGAAGAAAAAGGTCGCCATGGTTCTGGATAAAGACAGGTTCAGTTATAAATTTACTCGCA 1200
Query 1120 ACATAGCTTACATCATTGGAAAGAAGGGGTATTTC-AAAAAGGTGGATCTTGGAGAATCT 1178
||||||||||||||||||| ||||||||||| ||| |||||| |||||||||||||||||
Sbjct 1201 ACATAGCTTACATCATTGGGAAGAAGGGGTACTTCGAAAAAG-TGGATCTTGGAGAATCT 1259
Query 1179 ACAGTGCCATCTTGTGCCTCACTTGTGTGCTCTTACGTTCCAAGCTCAACGCAAATCTAG 1238
||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1260 ACAGTTTCAAGTTGTGCCTCACTTGTGTGCTCTTACGTTCCAAGCTCAGTGCAAATCTAG 1319
Query 1239 CAAGCTTCACCACGAGGCAACCACGTTGTTT-ACT-GTTTTTCTTTTCTCATGTATTTGA 1296
||||||||||||||||||||||| | | || | | ||||| ||||||| |||||| |||
Sbjct 1320 CAAGCTTCACCACGAGGCAACCAA-TCGATTCAATTGTTTT-CTTTTCTTATGTATCTGA 1377
Query 1297 TTGGTCTTGGAGATTT 1312
|| |||||||||||||
Sbjct 1378 TTTGTCTTGGAGATTT 1393
> AT2G18780.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:8136758-8138118 REVERSE LENGTH=1361
Length=1361
Score = 468 bits (253), Expect = 7e-131
Identities = 856/1134 (75%), Gaps = 94/1134 (8%)
Strand=Plus/Plus
Query 81 TCGGATCTTCCACGGGATTTGACAGAGGAGGTGCTCTCTAGGCTTCCGGTGACATCTATG 140
|||||||||||| |||| || | |||||||||||||| | | |||| ||||||||| ||
Sbjct 51 TCGGATCTTCCAAAGGATGTGGCGGAGGAGGTGCTCTCGAAGTTTCCAGTGACATCTCTG 110
Query 141 AG-AGCAGTGCGATTTACTTGCAAAAA-TTGGAATAGTTTATCGAAAGATCGGAGC-TTT 197
|| || ||| ||||| || |||||||| || ||| | |||||| |||||| | | |||
Sbjct 111 AGAAG-AGTACGATTCACATGCAAAAAGTT-GAACACTTTATCCAAAGATATG-TCTTTT 167
Query 198 AGAAAGAAGCACCTGCGTGGAGCAATATCAGCAGCGAAGAAGAAGCAGACG-AAGGAGTT 256
| || ||||||| | | || || | || ||| ||||||||||||| | ||||||||
Sbjct 168 ACAAGGAAGCACAT-C---GA-TAA-AGAAGAAGCAAAGAAGAAGCAGA-GTAAGGAGTT 220
Query 257 TCA-GGTGATCATGATGATTC-AATATAGGGTTTATTTATTCAG-CGTCAATCTCCTCAA 313
||| | || | |||||| || | | |||||||| ||||||||| | ||||||| || ||
Sbjct 221 TCATGTTG-TGATGATG-CTCGATTTTAGGGTTTCTTTATTCAGTC-TCAATCTACTAAA 277
Query 314 TCC--AT-CTATAGAGCGTATAGGTAAACTTATTAGCCTAGACGTTGAAG-ATCGTGTCG 369
|| || | ||||||||| ||||| ||||| ||||| |||||| || | | | ||||
Sbjct 278 CCCTAATCCCATAGAGCGTTTAGGTCAACTTGTTAGCTTAGACGGTGGTGCA-CAAGTCG 336
Query 370 ATATATCTAAAATCTTTCACTGCCACGGTTTATTGTTATGCATCACCAAAGACATATCTA 429
| |||||||| || ||||||||| | ||||| |||||||||| ||| |||||||||||||
Sbjct 337 ACATATCTAACATTTTTCACTGCGAGGGTTTCTTGTTATGCACCACTAAAGACATATCTA 396
Query 430 GGCTTGTGGTTTGGAACCCTTACT-CTGGGCAAACTAGGTGGATCCAACCTAGAAATTCT 488
|| |||| ||||||||||||| | ||||||||| | |||||| |||| ||||| |||
Sbjct 397 GGGTTGTTGTTTGGAACCCTT-GTGTTGGGCAAACAATTTGGATCAAACCCAGAAACTCT 455
Query 489 TACCACAGATTGGACAGGTACGCTTTAGGATATGAAGAGAAGAACAATTCATGTCGTAGC 548
| | ||| || ||| ||||| ||| | || || || | || ||| | | || |
Sbjct 456 TTCAACAAATGGGATAGGTATGCTCTGGGCTACGATGTGATGAA-GA---A--TC--A-- 505
Query 549 TACAAAATCTTGAGATTTATGGAT-A--ATTACCAGGGCGACAACCCACCGTACCTAGTT 605
| ||| | ||||||||| ||||| | | | | || | | || | || || ||
Sbjct 506 T--AAAGTTTTGAGATTTGTGGATGACGGTGAGTATGG-AAGGAGACA-CTTA-CT--TT 558
Query 606 CGTGAGTTTGAAATCTACGA-CTTAAACTCTGATTCATGGAAGGTTGTTGATGTCCCTCC 664
||||||||||||||||| | || | |||||||||||| ||||| ||||||| |||
Sbjct 559 -GTGAGTTTGAAATCTAC-AGTTTTGAGTCTGATTCATGGGAGGTTCTTGATGTGAATCC 616
Query 665 TGACTGGGAAATAGAGTATT-ATCACCGTGGCTTGTCTCTCAAGGGGAATACTTACTGGT 723
|| ||||| ||||| | || ||||||||| |||||| || | || || | ||||||||
Sbjct 617 GGATTGGGAGATAGA-TTTTGTTCACCGTGGTTTGTCTATCGATGGAAACAGTTACTGGT 675
Query 724 TTGCTCAAGAGAAGCTTCCAATATTCCCACTCGGAAGAGTGGTATC-AGAT-ATGGCTGA 781
|||| | ||| ||| | | || ||| | | | | || | | |||| | || |
Sbjct 676 TTGCACGAGACAAG-GT----TGTT-CCA-T---ATG-GAGG-A-CAAGATCCT-TCTTA 721
Query 782 TTTCTTACTCTGTTTTGATTTTACAAGGGAGAGGTTTGGACCGCGTCTGCCTCTGCCTTT 841
|||||| || ||||||||||| |||| |||||| ||| |||||| |||||||||||| ||
Sbjct 722 TTTCTTGCTGTGTTTTGATTTCACAACGGAGAGATTTAGACCGCCTCTGCCTCTGCCATT 781
Query 842 TCA-CTCTT-TTGTTGAAGATACTGTGACTCTATCTAGTGTTAGAGATAAGCA-ACTTGC 898
||| | ||| | ||| ||||||||| |||||||||| ||| | ||||| || | ||||
Sbjct 782 TCAGC-CTTACT-TTGGTGATACTGTGGCTCTATCTAGCGTTGGGGATAACCAGA-TTGC 838
Query 899 AGTGTTATTTCAGCCATGTT-AT-G-CATCTACCGTGAAGATATGGATTAGTAGCAAGAT 955
|| || | ||||| | || | | | | |||| |||||||||||||||| |||||| |
Sbjct 839 GGTCTTGTGTCAGCGGTCTTCTTCGCCGTATACCTTGAAGATATGGATTAGCAGCAAGGT 898
Query 956 TGAGCCCAATGCAGTGTCGTGGAGGAAGGTT-TTCTTAGCGGTTGATATGAAACCACTCA 1014
||||||||||||||||||||||| || ||| |||||| |||||| |||||||| ||||
Sbjct 899 TGAGCCCAATGCAGTGTCGTGGAACAA-GTTGTTCTTAAAGGTTGACATGAAACCTCTCA 957
Query 1015 CTGGT-TTTCAGTTTGACATTAACTC---TGGGAGTTTCTTTGTTGACCAGAAGAAAAAG 1070
||||| ||| || | || | || ||||||||||||||||||| || |||| |||
Sbjct 958 CTGGTAATTC--CTTCTC-TT-ATTCGGGTGGGAGTTTCTTTGTTGACGAGGAGAAGAAG 1013
Query 1071 GTCGCCATGGTTCTTGATAAAGAC--AGAT--TCAGATCTAAATTAACTCGCAACATAGC 1126
| || |||||||||||||| || || | | ||| | | ||||||||||||||
Sbjct 1014 ATGGCTGTGGTTCTTGATAAAAACATAGGTGGT-GGATTTGACCCGACTCGCAACATAGC 1072
Query 1127 TTACATCATTGGAAAGAAGGGGTATTTCAA-AAAGGTGGATCTTGGAGAATCTA 1179
|||||||||||||||| |||| || ||||| |||| || ||||||| |||||||
Sbjct 1073 TTACATCATTGGAAAGGAGGGCTACTTCAAGAAAGTTG-ATCTTGGCGAATCTA 1125
> AT3G18120.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:6210090-6210572 REVERSE LENGTH=483
Length=483
Score = 255 bits (138), Expect = 6e-67
Identities = 266/326 (82%), Gaps = 16/326 (5%)
Strand=Plus/Plus
Query 778 CTGATTTCTTACTCTGTTTTGATTTTACAAGGGAGAGGTTTGGACCGCGTCTGCCTCTGC 837
|||| ||||||||||||| |||||||||||| |||| |||||||| | ||| ||| |
Sbjct 101 CTGAGTTCTTACTCTGTTATGATTTTACAAGAGAGATATTTGGACCCCCTCTAAGTCTAC 160
Query 838 CTTTTCACTCTTTTGTTGAAGATACTGTGACTCTATCTAGTGTTAGAGATAAGCAACTTG 897
| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 161 CGTTTCACTCTTTTAATGAAGATACTGTGACTCTATCTAGTGTTAGAGATGAGCAACTTA 220
Query 898 CAGTGTTATTTCAGCCATGTT-ATGCATCTACCG-TGAAGATATGGATTA-GTAGC-AAG 953
||||||||||| || | | | || ||| ||| | || |||||||||||| | | | |||
Sbjct 221 CAGTGTTATTTGAGAGA-GATGATACAT-TACAGATGGAGATATGGATTACG-A-CTAAG 276
Query 954 ATTGAGCCC-AATGCAGTGTCGTGGAGGAAGGTT-TTCTTAGCGGTTGATATGAAACCAC 1011
||||||||| || ||| ||||||||| ||| || ||||||||||| | |||| ||||||
Sbjct 277 ATTGAGCCCGAAA-CAGCGTCGTGGAGCAAG-TTGTTCTTAGCGGTGGGTATGGAACCAC 334
Query 1012 TCACTGGTTTTCAGTTTGACATTAACTCTGGGAGTTTCTTTGTTGACCAGAAGAA-AAAG 1070
| |||||||| |||||| | || | |||||| ||||||||||||| || |||| ||||
Sbjct 335 TAACTGGTTTGCAGTTTCAGGTTGCCGCTGGGAATTTCTTTGTTGACGAGGAGAAGAAAG 394
Query 1071 GTCGCCATGGTTCTTG-ATAAAGACA 1095
| | | || || ||| |||||||||
Sbjct 395 TT-GTCGTGTTT-TTGGATAAAGACA 418
> AT3G19560.1 | Symbols: | F-box family protein | chr3:6793311-6794802
FORWARD LENGTH=1267
Length=1267
Score = 122 bits (66), Expect = 6e-27
Identities = 161/205 (79%), Gaps = 13/205 (6%)
Strand=Plus/Plus
Query 781 ATTTCTTACTCTGTTTTGATTTTACAAGGGAGAGGTTTGGACCGCGTCTGCCTCTGCCTT 840
|||| |||||||||||||||||||||| ||||| |||||||||| ||| ||||| || |
Sbjct 841 ATTT-TTACTCTGTTTTGATTTTACAAATGAGAGATTTGGACCGCTTCTCCCTCTTCCAT 899
Query 841 TTCACTCTTTTGTTGAAGA-TACTGTGA-CTCTATCTAGTGTT-AGAGATA-AGCAACTT 896
| || | || | | || | | || | | |||||||| |||| | ||| | |||| |||
Sbjct 900 TCCAATGTTATAATCAA-ACTTCTCT-AGTTCTATCTACTGTTCA-AGA-AGAGCAGCTT 955
Query 897 GCAGTGTTATTTCAGCCATGTTATGCATCTACCG-TGAAGATATGGATTAGTAGC-AAGA 954
|||||||||| | || ||| |||||| | | |||||||||||||| | | ||||
Sbjct 956 GCAGTGTTATGTAAGAGGTGTGATGCATAT-GAGACGAAGATATGGATTA-CAACAAAGA 1013
Query 955 TTGAGCCCAATGCAGTGTCGTGGAG 979
|||||||||||||||||||||||||
Sbjct 1014 TTGAGCCCAATGCAGTGTCGTGGAG 1038
> AT1G25150.1 | Symbols: | F-box family protein | chr1:8821008-8822533
FORWARD LENGTH=1526
Length=1526
Score = 104 bits (56), Expect = 2e-21
Identities = 106/131 (81%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 780 GATTTCTTACTCTGTTTTGATTTTACAAGGGAGAGGTTTGGACCGCGTCTGCCTCTGCCT 839
|||||||||||||||||||||||||||| |||| ||||| | |||||||||||| ||
Sbjct 755 GATTTCTTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCG 814
Query 840 TTTCACTCTTTTGTTGAAGATACTGTGACTCTATCTAGTGTTAGAGATAAGCAACTTGCA 899
||||||||| | | || | |||||||| || ||| |||||||||| |||| || ||
Sbjct 815 TTTCACTCTACTATCGATGCGACTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG 874
Query 900 GTGTTATTTCA 910
||| ||| |||
Sbjct 875 GTGCTATATCA 885
> AT1G25055.1 | Symbols: | F-box family protein | chr1:8806607-8808156
FORWARD LENGTH=1550
Length=1550
Score = 104 bits (56), Expect = 2e-21
Identities = 106/131 (81%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 780 GATTTCTTACTCTGTTTTGATTTTACAAGGGAGAGGTTTGGACCGCGTCTGCCTCTGCCT 839
|||||||||||||||||||||||||||| |||| ||||| | |||||||||||| ||
Sbjct 778 GATTTCTTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCG 837
Query 840 TTTCACTCTTTTGTTGAAGATACTGTGACTCTATCTAGTGTTAGAGATAAGCAACTTGCA 899
||||||||| | | || | |||||||| || ||| |||||||||| |||| || ||
Sbjct 838 TTTCACTCTACTATCGATGCGACTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG 897
Query 900 GTGTTATTTCA 910
||| ||| |||
Sbjct 898 GTGCTATATCA 908
> AT1G24881.1 | Symbols: | F-box family protein | chr1:8784036-8785634
FORWARD LENGTH=1599
Length=1599
Score = 104 bits (56), Expect = 2e-21
Identities = 106/131 (81%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 780 GATTTCTTACTCTGTTTTGATTTTACAAGGGAGAGGTTTGGACCGCGTCTGCCTCTGCCT 839
|||||||||||||||||||||||||||| |||| ||||| | |||||||||||| ||
Sbjct 820 GATTTCTTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCG 879
Query 840 TTTCACTCTTTTGTTGAAGATACTGTGACTCTATCTAGTGTTAGAGATAAGCAACTTGCA 899
||||||||| | | || | |||||||| || ||| |||||||||| |||| || ||
Sbjct 880 TTTCACTCTACTATCGATGCGACTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG 939
Query 900 GTGTTATTTCA 910
||| ||| |||
Sbjct 940 GTGCTATATCA 950
> AT1G25211.1 | Symbols: | F-box family protein | chr1:8835386-8837007
FORWARD LENGTH=1622
Length=1622
Score = 104 bits (56), Expect = 2e-21
Identities = 106/131 (81%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 780 GATTTCTTACTCTGTTTTGATTTTACAAGGGAGAGGTTTGGACCGCGTCTGCCTCTGCCT 839
|||||||||||||||||||||||||||| |||| ||||| | |||||||||||| ||
Sbjct 755 GATTTCTTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCG 814
Query 840 TTTCACTCTTTTGTTGAAGATACTGTGACTCTATCTAGTGTTAGAGATAAGCAACTTGCA 899
||||||||| | | || | |||||||| || ||| |||||||||| |||| || ||
Sbjct 815 TTTCACTCTACTATCGATGCGACTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG 874
Query 900 GTGTTATTTCA 910
||| ||| |||
Sbjct 875 GTGCTATATCA 885
> AT1G24800.1 | Symbols: | F-box family protein | chr1:8769660-8771251
FORWARD LENGTH=1592
Length=1592
Score = 104 bits (56), Expect = 2e-21
Identities = 106/131 (81%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 780 GATTTCTTACTCTGTTTTGATTTTACAAGGGAGAGGTTTGGACCGCGTCTGCCTCTGCCT 839
|||||||||||||||||||||||||||| |||| ||||| | |||||||||||| ||
Sbjct 817 GATTTCTTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCG 876
Query 840 TTTCACTCTTTTGTTGAAGATACTGTGACTCTATCTAGTGTTAGAGATAAGCAACTTGCA 899
||||||||| | | || | |||||||| || ||| |||||||||| |||| || ||
Sbjct 877 TTTCACTCTACTATCGATGCGACTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG 936
Query 900 GTGTTATTTCA 910
||| ||| |||
Sbjct 937 GTGCTATATCA 947
> AT3G16020.1 | Symbols: | F-box associated ubiquitination effector
protein | chr3:5438287-5438651 FORWARD LENGTH=297
Length=297
Score = 91.6 bits (49), Expect = 2e-17
Identities = 106/132 (80%), Gaps = 10/132 (8%)
Strand=Plus/Plus
Query 857 AGATACTGTGACTCTATCTAGTGTTAGAGATA-AGCAACTTGCAG-TGTTATTTCAGC-C 913
|||||||||||||||||||||||||||||| | |||| |||| || |||| |||||| |
Sbjct 162 AGATACTGTGACTCTATCTAGTGTTAGAGA-AGAGCAGCTTG-AGGTGTTGTTTCAGAAC 219
Query 914 ATGTTATGCATCTACCG-TGAAGATATGGATTA-GTAGCAAGATTGAGCCCAATGCAGTG 971
||| || | ||| | || |||| ||| ||| | | ||| ||||||||||||||| ||
Sbjct 220 -TGTCATAC-TCTTGAGATGGAGATTTGGGTTACG-ACCAACATTGAGCCCAATGCAATG 276
Query 972 TCGTGGAGGAAG 983
|| ||||| |||
Sbjct 277 TCCTGGAGCAAG 288
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67419331935
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5